Cow genome map
| Conread name: | Pig3-SRG8021P10 |
| Conread position: | 1-317 |
| Cow position: | chr16:4144758-4145080 (view UCSC Genome Browser custom track) |
| Alignm length: | 328 |
| Alignm identity: | 234 |
| Alignm E-value: | 9.80909e-45 |
| Alignm gaps (pig, cow): | 24, 78 |
| Conread position: | 1-371 |
| Cow position: | chr16:30715190-30715572 (view UCSC Genome Browser custom track) |
| Alignm length: | 386 |
| Alignm identity: | 278 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 19, 47 |
| Conread position: | 1-387 |
| Cow position: | chr16:46752581-46752187 (view UCSC Genome Browser custom track) |
| Alignm length: | 398 |
| Alignm identity: | 254 |
| Alignm E-value: | 3e-31 |
| Alignm gaps (pig, cow): | 24, 47 |
| Conread position: | 1-423 |
| Cow position: | chr16:11105249-11105674 (view UCSC Genome Browser custom track) |
| Alignm length: | 434 |
| Alignm identity: | 305 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 29, 82 |
| Conread position: | 1-425 |
| Cow position: | chr16:48494855-48494429 (view UCSC Genome Browser custom track) |
| Alignm length: | 434 |
| Alignm identity: | 303 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 68, 24 |
| Conread position: | 1-430 |
| Cow position: | chr16:48340991-48340563 (view UCSC Genome Browser custom track) |
| Alignm length: | 443 |
| Alignm identity: | 310 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 70, 24 |
| Conread position: | 1-488 |
| Cow position: | chr16:27701547-27701077 (view UCSC Genome Browser custom track) |
| Alignm length: | 496 |
| Alignm identity: | 344 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 19, 40 |
| Conread position: | 1-518 |
| Cow position: | chr16:819953-820466 (view UCSC Genome Browser custom track) |
| Alignm length: | 529 |
| Alignm identity: | 365 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 73, 16 |
| Conread position: | 1-522 |
| Cow position: | chr16:56231521-56232031 (view UCSC Genome Browser custom track) |
| Alignm length: | 529 |
| Alignm identity: | 381 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 19, 38 |
| Conread position: | 1-526 |
| Cow position: | chr16:48956504-48957021 (view UCSC Genome Browser custom track) |
| Alignm length: | 540 |
| Alignm identity: | 365 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 207, 24 |
| Conread position: | 4-512 |
| Cow position: | chr16:15824737-15824229 (view UCSC Genome Browser custom track) |
| Alignm length: | 525 |
| Alignm identity: | 361 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 15, 44 |
| Conread position: | 8-440 |
| Cow position: | chr16:7504805-7505228 (view UCSC Genome Browser custom track) |
| Alignm length: | 441 |
| Alignm identity: | 297 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 12, 33 |
| Conread position: | 19-370 |
| Cow position: | chr16:39646277-39646612 (view UCSC Genome Browser custom track) |
| Alignm length: | 355 |
| Alignm identity: | 246 |
| Alignm E-value: | 3e-39 |
| Alignm gaps (pig, cow): | 175, 32 |
| Conread position: | 31-430 |
| Cow position: | chr16:11103099-11102699 (view UCSC Genome Browser custom track) |
| Alignm length: | 409 |
| Alignm identity: | 280 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 38, 97 |
| Conread position: | 34-430 |
| Cow position: | chr16:5363623-5364031 (view UCSC Genome Browser custom track) |
| Alignm length: | 410 |
| Alignm identity: | 286 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 35, 11 |
| Conread position: | 34-528 |
| Cow position: | chr16:44744402-44743903 (view UCSC Genome Browser custom track) |
| Alignm length: | 514 |
| Alignm identity: | 337 |
| Alignm E-value: | 3.99931e-42 |
| Alignm gaps (pig, cow): | 34, 92 |
| Conread position: | 37-429 |
| Cow position: | chr16:5256736-5257123 (view UCSC Genome Browser custom track) |
| Alignm length: | 397 |
| Alignm identity: | 285 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 37, 57 |
| Conread position: | 40-522 |
| Cow position: | chr16:21450584-21451069 (view UCSC Genome Browser custom track) |
| Alignm length: | 493 |
| Alignm identity: | 320 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 29, 71 |
| Conread position: | 43-464 |
| Cow position: | chr16:48006751-48006332 (view UCSC Genome Browser custom track) |
| Alignm length: | 426 |
| Alignm identity: | 299 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 31, 9 |
| Conread position: | 44-502 |
| Cow position: | chr16:16597302-16597758 (view UCSC Genome Browser custom track) |
| Alignm length: | 465 |
| Alignm identity: | 316 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 25, 57 |
| Conread position: | 48-464 |
| Cow position: | chr16:11615484-11615081 (view UCSC Genome Browser custom track) |
| Alignm length: | 422 |
| Alignm identity: | 282 |
| Alignm E-value: | 9.99967e-42 |
| Alignm gaps (pig, cow): | 21, 90 |
| Conread position: | 49-372 |
| Cow position: | chr16:50873429-50873101 (view UCSC Genome Browser custom track) |
| Alignm length: | 335 |
| Alignm identity: | 236 |
| Alignm E-value: | 4.06377e-44 |
| Alignm gaps (pig, cow): | 87, 234 |
| Conread position: | 49-524 |
| Cow position: | chr16:7665377-7665863 (view UCSC Genome Browser custom track) |
| Alignm length: | 490 |
| Alignm identity: | 321 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 146, 348 |
| Conread position: | 57-370 |
| Cow position: | chr16:45703223-45702905 (view UCSC Genome Browser custom track) |
| Alignm length: | 326 |
| Alignm identity: | 223 |
| Alignm E-value: | 1e-31 |
| Alignm gaps (pig, cow): | 13, 71 |
| Conread position: | 66-517 |
| Cow position: | chr16:25839380-25839825 (view UCSC Genome Browser custom track) |
| Alignm length: | 457 |
| Alignm identity: | 318 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 159, 44 |
| Conread position: | 67-389 |
| Cow position: | chr16:32327416-32327744 (view UCSC Genome Browser custom track) |
| Alignm length: | 336 |
| Alignm identity: | 233 |
| Alignm E-value: | 8e-39 |
| Alignm gaps (pig, cow): | 145, 80 |
| Conread position: | 84-529 |
| Cow position: | chr16:10032409-10032864 (view UCSC Genome Browser custom track) |
| Alignm length: | 465 |
| Alignm identity: | 298 |
| Alignm E-value: | 3e-30 |
| Alignm gaps (pig, cow): | 67, 54 |
| Conread position: | 90-517 |
| Cow position: | chr16:42443940-42444373 (view UCSC Genome Browser custom track) |
| Alignm length: | 441 |
| Alignm identity: | 294 |
| Alignm E-value: | 9.80909e-45 |
| Alignm gaps (pig, cow): | 137, 9 |
| Conread position: | 99-511 |
| Cow position: | chr16:4275950-4275534 (view UCSC Genome Browser custom track) |
| Alignm length: | 420 |
| Alignm identity: | 252 |
| Alignm E-value: | 1e-21 |
| Alignm gaps (pig, cow): | 30, 255 |
| Conread position: | 105-389 |
| Cow position: | chr16:10352669-10352968 (view UCSC Genome Browser custom track) |
| Alignm length: | 300 |
| Alignm identity: | 199 |
| Alignm E-value: | 2e-28 |
| Alignm gaps (pig, cow): | 113, 0 |
| Conread position: | 105-442 |
| Cow position: | chr16:41697289-41696956 (view UCSC Genome Browser custom track) |
| Alignm length: | 346 |
| Alignm identity: | 242 |
| Alignm E-value: | 3.00004e-41 |
| Alignm gaps (pig, cow): | 89, 71 |
| Conread position: | 112-525 |
| Cow position: | chr16:592007-591578 (view UCSC Genome Browser custom track) |
| Alignm length: | 436 |
| Alignm identity: | 278 |
| Alignm E-value: | 7e-27 |
| Alignm gaps (pig, cow): | 78, 146 |
| Conread position: | 147-429 |
| Cow position: | chr16:17945362-17945652 (view UCSC Genome Browser custom track) |
| Alignm length: | 293 |
| Alignm identity: | 209 |
| Alignm E-value: | 3.00004e-41 |
| Alignm gaps (pig, cow): | 71, 45 |
| Conread position: | 150-514 |
| Cow position: | chr16:12320065-12320437 (view UCSC Genome Browser custom track) |
| Alignm length: | 380 |
| Alignm identity: | 262 |
| Alignm E-value: | 3.9937e-43 |
| Alignm gaps (pig, cow): | 68, 92 |
| Conread position: | 169-464 |
| Cow position: | chr16:41578088-41578388 (view UCSC Genome Browser custom track) |
| Alignm length: | 306 |
| Alignm identity: | 208 |
| Alignm E-value: | 1e-31 |
| Alignm gaps (pig, cow): | 49, 122 |
| Conread position: | 169-502 |
| Cow position: | chr16:9904955-9905295 (view UCSC Genome Browser custom track) |
| Alignm length: | 346 |
| Alignm identity: | 230 |
| Alignm E-value: | 1e-32 |
| Alignm gaps (pig, cow): | 58, 26 |
| Conread position: | 188-503 |
| Cow position: | chr16:34754079-34753753 (view UCSC Genome Browser custom track) |
| Alignm length: | 330 |
| Alignm identity: | 218 |
| Alignm E-value: | 2e-28 |
| Alignm gaps (pig, cow): | 30, 165 |
| Conread position: | 198-506 |
| Cow position: | chr16:45121930-45122245 (view UCSC Genome Browser custom track) |
| Alignm length: | 322 |
| Alignm identity: | 217 |
| Alignm E-value: | 9e-30 |
| Alignm gaps (pig, cow): | 20, 57 |
| Conread position: | 200-509 |
| Cow position: | chr16:40514587-40514287 (view UCSC Genome Browser custom track) |
| Alignm length: | 314 |
| Alignm identity: | 220 |
| Alignm E-value: | 2e-37 |
| Alignm gaps (pig, cow): | 15, 77 |
| Conread position: | 239-507 |
| Cow position: | chr16:20824420-20824681 (view UCSC Genome Browser custom track) |
| Alignm length: | 271 |
| Alignm identity: | 179 |
| Alignm E-value: | 1e-23 |
| Alignm gaps (pig, cow): | 162, 15 |
| Conread position: | 239-520 |
| Cow position: | chr16:17135125-17134845 (view UCSC Genome Browser custom track) |
| Alignm length: | 290 |
| Alignm identity: | 194 |
| Alignm E-value: | 1e-23 |
| Alignm gaps (pig, cow): | 32, 12 |
Show alignments to all cow chromosomes.