Cow genome map
| Conread name: | Pig3-SRG8021P10 |
| Conread position: | 1-359 |
| Cow position: | chr2:34694937-34695301 (view UCSC Genome Browser custom track) |
| Alignm length: | 371 |
| Alignm identity: | 266 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 27, 40 |
| Conread position: | 1-372 |
| Cow position: | chr2:45912939-45912563 (view UCSC Genome Browser custom track) |
| Alignm length: | 380 |
| Alignm identity: | 268 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 19, 43 |
| Conread position: | 1-375 |
| Cow position: | chr2:14089479-14089865 (view UCSC Genome Browser custom track) |
| Alignm length: | 391 |
| Alignm identity: | 285 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 19, 47 |
| Conread position: | 1-396 |
| Cow position: | chr2:52344461-52344844 (view UCSC Genome Browser custom track) |
| Alignm length: | 403 |
| Alignm identity: | 294 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 19, 47 |
| Conread position: | 1-492 |
| Cow position: | chr2:42800749-42801224 (view UCSC Genome Browser custom track) |
| Alignm length: | 498 |
| Alignm identity: | 350 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 227, 24 |
| Conread position: | 1-492 |
| Cow position: | chr2:71437682-71437188 (view UCSC Genome Browser custom track) |
| Alignm length: | 503 |
| Alignm identity: | 344 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 75, 24 |
| Conread position: | 1-507 |
| Cow position: | chr2:46312150-46312640 (view UCSC Genome Browser custom track) |
| Alignm length: | 522 |
| Alignm identity: | 359 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 19, 45 |
| Conread position: | 1-509 |
| Cow position: | chr2:19493903-19494420 (view UCSC Genome Browser custom track) |
| Alignm length: | 528 |
| Alignm identity: | 361 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 24, 145 |
| Conread position: | 1-525 |
| Cow position: | chr2:45499498-45498980 (view UCSC Genome Browser custom track) |
| Alignm length: | 535 |
| Alignm identity: | 376 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 24, 37 |
| Conread position: | 1-528 |
| Cow position: | chr2:33497505-33496977 (view UCSC Genome Browser custom track) |
| Alignm length: | 544 |
| Alignm identity: | 364 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 19, 51 |
| Conread position: | 1-648 |
| Cow position: | chr2:6539538-6538872 (view UCSC Genome Browser custom track) |
| Alignm length: | 674 |
| Alignm identity: | 442 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 19, 48 |
| Conread position: | 2-430 |
| Cow position: | chr2:59953153-59952735 (view UCSC Genome Browser custom track) |
| Alignm length: | 435 |
| Alignm identity: | 287 |
| Alignm E-value: | 3e-38 |
| Alignm gaps (pig, cow): | 72, 23 |
| Conread position: | 3-370 |
| Cow position: | chr2:27358743-27359114 (view UCSC Genome Browser custom track) |
| Alignm length: | 383 |
| Alignm identity: | 265 |
| Alignm E-value: | 1e-38 |
| Alignm gaps (pig, cow): | 17, 45 |
| Conread position: | 7-491 |
| Cow position: | chr2:57939390-57939874 (view UCSC Genome Browser custom track) |
| Alignm length: | 494 |
| Alignm identity: | 350 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 68, 13 |
| Conread position: | 7-505 |
| Cow position: | chr2:80255-79759 (view UCSC Genome Browser custom track) |
| Alignm length: | 506 |
| Alignm identity: | 338 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 65, 88 |
| Conread position: | 8-464 |
| Cow position: | chr2:45535176-45535627 (view UCSC Genome Browser custom track) |
| Alignm length: | 464 |
| Alignm identity: | 277 |
| Alignm E-value: | 5.99756e-43 |
| Alignm gaps (pig, cow): | 219, 73 |
| Conread position: | 9-507 |
| Cow position: | chr2:32114772-32115266 (view UCSC Genome Browser custom track) |
| Alignm length: | 516 |
| Alignm identity: | 360 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 11, 39 |
| Conread position: | 19-360 |
| Cow position: | chr2:11806037-11806376 (view UCSC Genome Browser custom track) |
| Alignm length: | 348 |
| Alignm identity: | 256 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 50, 28 |
| Conread position: | 19-444 |
| Cow position: | chr2:70703972-70704398 (view UCSC Genome Browser custom track) |
| Alignm length: | 432 |
| Alignm identity: | 302 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 193, 28 |
| Conread position: | 22-426 |
| Cow position: | chr2:38273265-38273671 (view UCSC Genome Browser custom track) |
| Alignm length: | 420 |
| Alignm identity: | 283 |
| Alignm E-value: | 4e-39 |
| Alignm gaps (pig, cow): | 15, 29 |
| Conread position: | 31-529 |
| Cow position: | chr2:46189362-46188871 (view UCSC Genome Browser custom track) |
| Alignm length: | 506 |
| Alignm identity: | 348 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 187, 43 |
| Conread position: | 34-512 |
| Cow position: | chr2:44167813-44168272 (view UCSC Genome Browser custom track) |
| Alignm length: | 481 |
| Alignm identity: | 316 |
| Alignm E-value: | 1.4013e-45 |
| Alignm gaps (pig, cow): | 194, 48 |
| Conread position: | 34-528 |
| Cow position: | chr2:46033069-46033560 (view UCSC Genome Browser custom track) |
| Alignm length: | 505 |
| Alignm identity: | 348 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 178, 30 |
| Conread position: | 35-360 |
| Cow position: | chr2:46330789-46331120 (view UCSC Genome Browser custom track) |
| Alignm length: | 333 |
| Alignm identity: | 241 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 37, 5 |
| Conread position: | 40-372 |
| Cow position: | chr2:41954616-41954955 (view UCSC Genome Browser custom track) |
| Alignm length: | 342 |
| Alignm identity: | 237 |
| Alignm E-value: | 7.00649e-45 |
| Alignm gaps (pig, cow): | 103, 34 |
| Conread position: | 40-515 |
| Cow position: | chr2:13001548-13002007 (view UCSC Genome Browser custom track) |
| Alignm length: | 479 |
| Alignm identity: | 332 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 361, 34 |
| Conread position: | 48-423 |
| Cow position: | chr2:17444539-17444918 (view UCSC Genome Browser custom track) |
| Alignm length: | 390 |
| Alignm identity: | 271 |
| Alignm E-value: | 1.4013e-45 |
| Alignm gaps (pig, cow): | 26, 100 |
| Conread position: | 49-464 |
| Cow position: | chr2:21002933-21003336 (view UCSC Genome Browser custom track) |
| Alignm length: | 421 |
| Alignm identity: | 288 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 219, 28 |
| Conread position: | 53-528 |
| Cow position: | chr2:16839383-16839858 (view UCSC Genome Browser custom track) |
| Alignm length: | 489 |
| Alignm identity: | 315 |
| Alignm E-value: | 3e-38 |
| Alignm gaps (pig, cow): | 22, 101 |
| Conread position: | 61-372 |
| Cow position: | chr2:62644357-62644656 (view UCSC Genome Browser custom track) |
| Alignm length: | 319 |
| Alignm identity: | 213 |
| Alignm E-value: | 7e-24 |
| Alignm gaps (pig, cow): | 12, 51 |
| Conread position: | 68-360 |
| Cow position: | chr2:34535392-34535100 (view UCSC Genome Browser custom track) |
| Alignm length: | 302 |
| Alignm identity: | 207 |
| Alignm E-value: | 5e-31 |
| Alignm gaps (pig, cow): | 58, 78 |
| Conread position: | 68-372 |
| Cow position: | chr2:13604231-13604538 (view UCSC Genome Browser custom track) |
| Alignm length: | 309 |
| Alignm identity: | 207 |
| Alignm E-value: | 3e-36 |
| Alignm gaps (pig, cow): | 143, 92 |
| Conread position: | 80-521 |
| Cow position: | chr2:68970511-68970963 (view UCSC Genome Browser custom track) |
| Alignm length: | 458 |
| Alignm identity: | 303 |
| Alignm E-value: | 1.96182e-44 |
| Alignm gaps (pig, cow): | 101, 93 |
| Conread position: | 82-530 |
| Cow position: | chr2:61136509-61136959 (view UCSC Genome Browser custom track) |
| Alignm length: | 464 |
| Alignm identity: | 288 |
| Alignm E-value: | 5e-21 |
| Alignm gaps (pig, cow): | 94, 11 |
| Conread position: | 98-540 |
| Cow position: | chr2:40484725-40484268 (view UCSC Genome Browser custom track) |
| Alignm length: | 468 |
| Alignm identity: | 318 |
| Alignm E-value: | 7.00649e-45 |
| Alignm gaps (pig, cow): | 120, 34 |
| Conread position: | 120-521 |
| Cow position: | chr2:34750166-34749774 (view UCSC Genome Browser custom track) |
| Alignm length: | 406 |
| Alignm identity: | 280 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 109, 126 |
| Conread position: | 132-417 |
| Cow position: | chr2:30144552-30144829 (view UCSC Genome Browser custom track) |
| Alignm length: | 287 |
| Alignm identity: | 204 |
| Alignm E-value: | 4.99997e-41 |
| Alignm gaps (pig, cow): | 147, 23 |
| Conread position: | 132-420 |
| Cow position: | chr2:46247633-46247341 (view UCSC Genome Browser custom track) |
| Alignm length: | 296 |
| Alignm identity: | 204 |
| Alignm E-value: | 3e-36 |
| Alignm gaps (pig, cow): | 86, 145 |
| Conread position: | 136-419 |
| Cow position: | chr2:25448161-25448445 (view UCSC Genome Browser custom track) |
| Alignm length: | 289 |
| Alignm identity: | 201 |
| Alignm E-value: | 3e-36 |
| Alignm gaps (pig, cow): | 127, 17 |
| Conread position: | 162-492 |
| Cow position: | chr2:17842119-17841802 (view UCSC Genome Browser custom track) |
| Alignm length: | 333 |
| Alignm identity: | 217 |
| Alignm E-value: | 3e-25 |
| Alignm gaps (pig, cow): | 51, 11 |
| Conread position: | 164-521 |
| Cow position: | chr2:33472127-33471779 (view UCSC Genome Browser custom track) |
| Alignm length: | 361 |
| Alignm identity: | 229 |
| Alignm E-value: | 3e-25 |
| Alignm gaps (pig, cow): | 32, 92 |
| Conread position: | 165-430 |
| Cow position: | chr2:54810995-54810726 (view UCSC Genome Browser custom track) |
| Alignm length: | 273 |
| Alignm identity: | 177 |
| Alignm E-value: | 5e-21 |
| Alignm gaps (pig, cow): | 45, 194 |
| Conread position: | 185-441 |
| Cow position: | chr2:44222701-44222967 (view UCSC Genome Browser custom track) |
| Alignm length: | 267 |
| Alignm identity: | 179 |
| Alignm E-value: | 3e-26 |
| Alignm gaps (pig, cow): | 43, 0 |
| Conread position: | 193-531 |
| Cow position: | chr2:60091541-60091211 (view UCSC Genome Browser custom track) |
| Alignm length: | 344 |
| Alignm identity: | 227 |
| Alignm E-value: | 1e-28 |
| Alignm gaps (pig, cow): | 29, 73 |
| Conread position: | 195-509 |
| Cow position: | chr2:19138004-19137685 (view UCSC Genome Browser custom track) |
| Alignm length: | 324 |
| Alignm identity: | 208 |
| Alignm E-value: | 2e-23 |
| Alignm gaps (pig, cow): | 23, 245 |
| Conread position: | 228-522 |
| Cow position: | chr2:57733355-57733647 (view UCSC Genome Browser custom track) |
| Alignm length: | 304 |
| Alignm identity: | 201 |
| Alignm E-value: | 2e-21 |
| Alignm gaps (pig, cow): | 56, 39 |
| Conread position: | 228-529 |
| Cow position: | chr2:13672450-13672736 (view UCSC Genome Browser custom track) |
| Alignm length: | 302 |
| Alignm identity: | 208 |
| Alignm E-value: | 2e-33 |
| Alignm gaps (pig, cow): | 50, 0 |
| Conread position: | 239-490 |
| Cow position: | chr2:10439773-10440015 (view UCSC Genome Browser custom track) |
| Alignm length: | 254 |
| Alignm identity: | 172 |
| Alignm E-value: | 6e-23 |
| Alignm gaps (pig, cow): | 39, 161 |
| Conread position: | 239-492 |
| Cow position: | chr2:38640251-38640507 (view UCSC Genome Browser custom track) |
| Alignm length: | 263 |
| Alignm identity: | 179 |
| Alignm E-value: | 7e-24 |
| Alignm gaps (pig, cow): | 26, 130 |
| Conread position: | 239-607 |
| Cow position: | chr2:28301141-28301510 (view UCSC Genome Browser custom track) |
| Alignm length: | 379 |
| Alignm identity: | 240 |
| Alignm E-value: | 6e-23 |
| Alignm gaps (pig, cow): | 48, 41 |
| Conread position: | 242-502 |
| Cow position: | chr2:82116029-82116285 (view UCSC Genome Browser custom track) |
| Alignm length: | 262 |
| Alignm identity: | 169 |
| Alignm E-value: | 5e-21 |
| Alignm gaps (pig, cow): | 31, 20 |
| Conread position: | 242-525 |
| Cow position: | chr2:40257475-40257195 (view UCSC Genome Browser custom track) |
| Alignm length: | 286 |
| Alignm identity: | 185 |
| Alignm E-value: | 3e-25 |
| Alignm gaps (pig, cow): | 33, 156 |
| Conread position: | 255-507 |
| Cow position: | chr2:50449959-50449706 (view UCSC Genome Browser custom track) |
| Alignm length: | 258 |
| Alignm identity: | 177 |
| Alignm E-value: | 4e-29 |
| Alignm gaps (pig, cow): | 13, 186 |
| Conread position: | 260-491 |
| Cow position: | chr2:39750071-39750304 (view UCSC Genome Browser custom track) |
| Alignm length: | 238 |
| Alignm identity: | 159 |
| Alignm E-value: | 5e-21 |
| Alignm gaps (pig, cow): | 18, 103 |
| Conread position: | 286-506 |
| Cow position: | chr2:40703683-40703467 (view UCSC Genome Browser custom track) |
| Alignm length: | 223 |
| Alignm identity: | 152 |
| Alignm E-value: | 6e-22 |
| Alignm gaps (pig, cow): | 81, 75 |
Show alignments to all cow chromosomes.