Cow genome map
| Conread name: | Pig3-SRG8021P10 |
| Conread position: | 1-368 |
| Cow position: | chr28:7549358-7548989 (view UCSC Genome Browser custom track) |
| Alignm length: | 373 |
| Alignm identity: | 276 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 19, 47 |
| Conread position: | 1-400 |
| Cow position: | chr28:5792409-5792808 (view UCSC Genome Browser custom track) |
| Alignm length: | 414 |
| Alignm identity: | 275 |
| Alignm E-value: | 9e-35 |
| Alignm gaps (pig, cow): | 73, 24 |
| Conread position: | 1-428 |
| Cow position: | chr28:11752441-11752009 (view UCSC Genome Browser custom track) |
| Alignm length: | 436 |
| Alignm identity: | 304 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 19, 47 |
| Conread position: | 1-432 |
| Cow position: | chr28:6971635-6971212 (view UCSC Genome Browser custom track) |
| Alignm length: | 438 |
| Alignm identity: | 308 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 19, 40 |
| Conread position: | 1-492 |
| Cow position: | chr28:13474011-13474492 (view UCSC Genome Browser custom track) |
| Alignm length: | 498 |
| Alignm identity: | 350 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 227, 24 |
| Conread position: | 1-501 |
| Cow position: | chr28:3024205-3023714 (view UCSC Genome Browser custom track) |
| Alignm length: | 506 |
| Alignm identity: | 356 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 15, 27 |
| Conread position: | 1-508 |
| Cow position: | chr28:25056675-25057165 (view UCSC Genome Browser custom track) |
| Alignm length: | 513 |
| Alignm identity: | 358 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 19, 40 |
| Conread position: | 1-509 |
| Cow position: | chr28:11585504-11584998 (view UCSC Genome Browser custom track) |
| Alignm length: | 520 |
| Alignm identity: | 367 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 19, 38 |
| Conread position: | 1-523 |
| Cow position: | chr28:22332254-22332755 (view UCSC Genome Browser custom track) |
| Alignm length: | 536 |
| Alignm identity: | 364 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 19, 47 |
| Conread position: | 1-534 |
| Cow position: | chr28:9426638-9426115 (view UCSC Genome Browser custom track) |
| Alignm length: | 544 |
| Alignm identity: | 362 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 23, 40 |
| Conread position: | 1-640 |
| Cow position: | chr28:20312978-20313625 (view UCSC Genome Browser custom track) |
| Alignm length: | 660 |
| Alignm identity: | 411 |
| Alignm E-value: | 1.99965e-42 |
| Alignm gaps (pig, cow): | 19, 48 |
| Conread position: | 2-504 |
| Cow position: | chr28:5684409-5684906 (view UCSC Genome Browser custom track) |
| Alignm length: | 513 |
| Alignm identity: | 358 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 18, 39 |
| Conread position: | 3-310 |
| Cow position: | chr28:9390659-9390352 (view UCSC Genome Browser custom track) |
| Alignm length: | 314 |
| Alignm identity: | 220 |
| Alignm E-value: | 2e-40 |
| Alignm gaps (pig, cow): | 17, 45 |
| Conread position: | 6-550 |
| Cow position: | chr28:5203911-5204435 (view UCSC Genome Browser custom track) |
| Alignm length: | 554 |
| Alignm identity: | 372 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 8, 35 |
| Conread position: | 12-371 |
| Cow position: | chr28:29199440-29199802 (view UCSC Genome Browser custom track) |
| Alignm length: | 370 |
| Alignm identity: | 257 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 17, 126 |
| Conread position: | 22-523 |
| Cow position: | chr28:21868177-21868677 (view UCSC Genome Browser custom track) |
| Alignm length: | 508 |
| Alignm identity: | 357 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 196, 14 |
| Conread position: | 25-372 |
| Cow position: | chr28:5128998-5128656 (view UCSC Genome Browser custom track) |
| Alignm length: | 349 |
| Alignm identity: | 251 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 252, 14 |
| Conread position: | 32-514 |
| Cow position: | chr28:5236867-5236378 (view UCSC Genome Browser custom track) |
| Alignm length: | 499 |
| Alignm identity: | 330 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 13, 46 |
| Conread position: | 35-429 |
| Cow position: | chr28:25806326-25806700 (view UCSC Genome Browser custom track) |
| Alignm length: | 401 |
| Alignm identity: | 262 |
| Alignm E-value: | 1e-28 |
| Alignm gaps (pig, cow): | 161, 39 |
| Conread position: | 40-469 |
| Cow position: | chr28:3408475-3408051 (view UCSC Genome Browser custom track) |
| Alignm length: | 438 |
| Alignm identity: | 291 |
| Alignm E-value: | 6.00036e-42 |
| Alignm gaps (pig, cow): | 150, 194 |
| Conread position: | 46-423 |
| Cow position: | chr28:3078930-3078557 (view UCSC Genome Browser custom track) |
| Alignm length: | 384 |
| Alignm identity: | 265 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 28, 102 |
| Conread position: | 49-528 |
| Cow position: | chr28:22345770-22346252 (view UCSC Genome Browser custom track) |
| Alignm length: | 496 |
| Alignm identity: | 351 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 25, 51 |
| Conread position: | 58-430 |
| Cow position: | chr28:26220021-26220392 (view UCSC Genome Browser custom track) |
| Alignm length: | 384 |
| Alignm identity: | 264 |
| Alignm E-value: | 1.99965e-42 |
| Alignm gaps (pig, cow): | 16, 72 |
| Conread position: | 59-545 |
| Cow position: | chr28:9636696-9636220 (view UCSC Genome Browser custom track) |
| Alignm length: | 494 |
| Alignm identity: | 340 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 15, 222 |
| Conread position: | 64-471 |
| Cow position: | chr28:11884757-11884356 (view UCSC Genome Browser custom track) |
| Alignm length: | 413 |
| Alignm identity: | 296 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 10, 64 |
| Conread position: | 79-360 |
| Cow position: | chr28:2738030-2737745 (view UCSC Genome Browser custom track) |
| Alignm length: | 286 |
| Alignm identity: | 200 |
| Alignm E-value: | 1.99965e-42 |
| Alignm gaps (pig, cow): | 147, 0 |
| Conread position: | 88-517 |
| Cow position: | chr28:5437301-5436867 (view UCSC Genome Browser custom track) |
| Alignm length: | 439 |
| Alignm identity: | 305 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 130, 278 |
| Conread position: | 99-507 |
| Cow position: | chr28:4158753-4159173 (view UCSC Genome Browser custom track) |
| Alignm length: | 424 |
| Alignm identity: | 289 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 35, 166 |
| Conread position: | 100-537 |
| Cow position: | chr28:4809596-4810012 (view UCSC Genome Browser custom track) |
| Alignm length: | 441 |
| Alignm identity: | 291 |
| Alignm E-value: | 5e-39 |
| Alignm gaps (pig, cow): | 301, 110 |
| Conread position: | 105-525 |
| Cow position: | chr28:4835038-4834617 (view UCSC Genome Browser custom track) |
| Alignm length: | 427 |
| Alignm identity: | 292 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 173, 182 |
| Conread position: | 112-525 |
| Cow position: | chr28:11866855-11866440 (view UCSC Genome Browser custom track) |
| Alignm length: | 421 |
| Alignm identity: | 274 |
| Alignm E-value: | 5.99994e-41 |
| Alignm gaps (pig, cow): | 59, 139 |
| Conread position: | 119-521 |
| Cow position: | chr28:14720956-14720562 (view UCSC Genome Browser custom track) |
| Alignm length: | 410 |
| Alignm identity: | 260 |
| Alignm E-value: | 4e-27 |
| Alignm gaps (pig, cow): | 77, 31 |
| Conread position: | 120-314 |
| Cow position: | chr28:657625-657436 (view UCSC Genome Browser custom track) |
| Alignm length: | 195 |
| Alignm identity: | 138 |
| Alignm E-value: | 4e-26 |
| Alignm gaps (pig, cow): | 17, 0 |
| Conread position: | 120-440 |
| Cow position: | chr28:2132100-2131780 (view UCSC Genome Browser custom track) |
| Alignm length: | 326 |
| Alignm identity: | 229 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 152, 55 |
| Conread position: | 137-389 |
| Cow position: | chr28:32365681-32365934 (view UCSC Genome Browser custom track) |
| Alignm length: | 256 |
| Alignm identity: | 165 |
| Alignm E-value: | 2e-21 |
| Alignm gaps (pig, cow): | 21, 74 |
| Conread position: | 147-507 |
| Cow position: | chr28:24082116-24082478 (view UCSC Genome Browser custom track) |
| Alignm length: | 370 |
| Alignm identity: | 246 |
| Alignm E-value: | 1e-37 |
| Alignm gaps (pig, cow): | 58, 20 |
| Conread position: | 228-506 |
| Cow position: | chr28:7350588-7350858 (view UCSC Genome Browser custom track) |
| Alignm length: | 282 |
| Alignm identity: | 195 |
| Alignm E-value: | 2e-30 |
| Alignm gaps (pig, cow): | 138, 46 |
| Conread position: | 229-509 |
| Cow position: | chr28:4181935-4182211 (view UCSC Genome Browser custom track) |
| Alignm length: | 287 |
| Alignm identity: | 189 |
| Alignm E-value: | 7e-22 |
| Alignm gaps (pig, cow): | 139, 45 |
| Conread position: | 230-505 |
| Cow position: | chr28:3411059-3410783 (view UCSC Genome Browser custom track) |
| Alignm length: | 281 |
| Alignm identity: | 182 |
| Alignm E-value: | 8e-23 |
| Alignm gaps (pig, cow): | 39, 175 |
| Conread position: | 286-502 |
| Cow position: | chr28:29850828-29850619 (view UCSC Genome Browser custom track) |
| Alignm length: | 218 |
| Alignm identity: | 150 |
| Alignm E-value: | 2e-22 |
| Alignm gaps (pig, cow): | 80, 75 |
Show alignments to all cow chromosomes.