Cow genome map
| Conread name: | Pig3-SRG8021P10 |
| Conread position: | 1-340 |
| Cow position: | chr3:5851252-5850917 (view UCSC Genome Browser custom track) |
| Alignm length: | 342 |
| Alignm identity: | 257 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 19, 47 |
| Conread position: | 1-488 |
| Cow position: | chr3:11987006-11987488 (view UCSC Genome Browser custom track) |
| Alignm length: | 497 |
| Alignm identity: | 325 |
| Alignm E-value: | 7.00649e-45 |
| Alignm gaps (pig, cow): | 19, 35 |
| Conread position: | 1-501 |
| Cow position: | chr3:10958550-10958071 (view UCSC Genome Browser custom track) |
| Alignm length: | 509 |
| Alignm identity: | 354 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 226, 18 |
| Conread position: | 1-507 |
| Cow position: | chr3:78076867-78077369 (view UCSC Genome Browser custom track) |
| Alignm length: | 515 |
| Alignm identity: | 366 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 73, 24 |
| Conread position: | 1-525 |
| Cow position: | chr3:61225059-61224551 (view UCSC Genome Browser custom track) |
| Alignm length: | 530 |
| Alignm identity: | 336 |
| Alignm E-value: | 3e-38 |
| Alignm gaps (pig, cow): | 70, 37 |
| Conread position: | 1-528 |
| Cow position: | chr3:71497471-71496926 (view UCSC Genome Browser custom track) |
| Alignm length: | 555 |
| Alignm identity: | 377 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 15, 47 |
| Conread position: | 1-553 |
| Cow position: | chr3:57577374-57577924 (view UCSC Genome Browser custom track) |
| Alignm length: | 567 |
| Alignm identity: | 370 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 19, 47 |
| Conread position: | 3-390 |
| Cow position: | chr3:28908526-28908141 (view UCSC Genome Browser custom track) |
| Alignm length: | 399 |
| Alignm identity: | 268 |
| Alignm E-value: | 3e-38 |
| Alignm gaps (pig, cow): | 17, 142 |
| Conread position: | 6-431 |
| Cow position: | chr3:67704216-67704652 (view UCSC Genome Browser custom track) |
| Alignm length: | 439 |
| Alignm identity: | 304 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 14, 158 |
| Conread position: | 14-528 |
| Cow position: | chr3:50768368-50768876 (view UCSC Genome Browser custom track) |
| Alignm length: | 521 |
| Alignm identity: | 381 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 214, 33 |
| Conread position: | 19-490 |
| Cow position: | chr3:59611022-59610557 (view UCSC Genome Browser custom track) |
| Alignm length: | 481 |
| Alignm identity: | 332 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 199, 28 |
| Conread position: | 24-491 |
| Cow position: | chr3:53270525-53270996 (view UCSC Genome Browser custom track) |
| Alignm length: | 482 |
| Alignm identity: | 320 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 45, 26 |
| Conread position: | 24-525 |
| Cow position: | chr3:72473606-72474119 (view UCSC Genome Browser custom track) |
| Alignm length: | 518 |
| Alignm identity: | 335 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 51, 23 |
| Conread position: | 25-528 |
| Cow position: | chr3:7338081-7337591 (view UCSC Genome Browser custom track) |
| Alignm length: | 513 |
| Alignm identity: | 354 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 45, 15 |
| Conread position: | 29-428 |
| Cow position: | chr3:56059510-56059914 (view UCSC Genome Browser custom track) |
| Alignm length: | 411 |
| Alignm identity: | 302 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 40, 7 |
| Conread position: | 48-521 |
| Cow position: | chr3:74233921-74234372 (view UCSC Genome Browser custom track) |
| Alignm length: | 475 |
| Alignm identity: | 337 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 354, 29 |
| Conread position: | 57-426 |
| Cow position: | chr3:57624193-57624565 (view UCSC Genome Browser custom track) |
| Alignm length: | 383 |
| Alignm identity: | 257 |
| Alignm E-value: | 3e-36 |
| Alignm gaps (pig, cow): | 17, 85 |
| Conread position: | 58-531 |
| Cow position: | chr3:60933146-60933622 (view UCSC Genome Browser custom track) |
| Alignm length: | 486 |
| Alignm identity: | 325 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 11, 95 |
| Conread position: | 63-455 |
| Cow position: | chr3:73460715-73461093 (view UCSC Genome Browser custom track) |
| Alignm length: | 396 |
| Alignm identity: | 282 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 218, 108 |
| Conread position: | 74-434 |
| Cow position: | chr3:13507209-13507573 (view UCSC Genome Browser custom track) |
| Alignm length: | 370 |
| Alignm identity: | 257 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 14, 94 |
| Conread position: | 77-507 |
| Cow position: | chr3:44932259-44932692 (view UCSC Genome Browser custom track) |
| Alignm length: | 439 |
| Alignm identity: | 322 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 151, 290 |
| Conread position: | 102-489 |
| Cow position: | chr3:56612132-56612523 (view UCSC Genome Browser custom track) |
| Alignm length: | 399 |
| Alignm identity: | 257 |
| Alignm E-value: | 2e-31 |
| Alignm gaps (pig, cow): | 89, 16 |
| Conread position: | 103-490 |
| Cow position: | chr3:78092733-78092349 (view UCSC Genome Browser custom track) |
| Alignm length: | 394 |
| Alignm identity: | 274 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 172, 106 |
| Conread position: | 104-534 |
| Cow position: | chr3:83215031-83215478 (view UCSC Genome Browser custom track) |
| Alignm length: | 454 |
| Alignm identity: | 284 |
| Alignm E-value: | 3e-25 |
| Alignm gaps (pig, cow): | 86, 33 |
| Conread position: | 110-375 |
| Cow position: | chr3:25944861-25945140 (view UCSC Genome Browser custom track) |
| Alignm length: | 281 |
| Alignm identity: | 191 |
| Alignm E-value: | 9e-26 |
| Alignm gaps (pig, cow): | 85, 156 |
| Conread position: | 116-370 |
| Cow position: | chr3:27697193-27696936 (view UCSC Genome Browser custom track) |
| Alignm length: | 262 |
| Alignm identity: | 188 |
| Alignm E-value: | 8e-36 |
| Alignm gaps (pig, cow): | 75, 165 |
| Conread position: | 128-387 |
| Cow position: | chr3:53095138-53094872 (view UCSC Genome Browser custom track) |
| Alignm length: | 267 |
| Alignm identity: | 171 |
| Alignm E-value: | 2e-21 |
| Alignm gaps (pig, cow): | 68, 0 |
| Conread position: | 144-521 |
| Cow position: | chr3:54506521-54506896 (view UCSC Genome Browser custom track) |
| Alignm length: | 384 |
| Alignm identity: | 256 |
| Alignm E-value: | 4.00001e-40 |
| Alignm gaps (pig, cow): | 13, 84 |
| Conread position: | 149-518 |
| Cow position: | chr3:55819566-55819941 (view UCSC Genome Browser custom track) |
| Alignm length: | 385 |
| Alignm identity: | 253 |
| Alignm E-value: | 1e-30 |
| Alignm gaps (pig, cow): | 47, 238 |
| Conread position: | 151-492 |
| Cow position: | chr3:76922842-76922509 (view UCSC Genome Browser custom track) |
| Alignm length: | 348 |
| Alignm identity: | 242 |
| Alignm E-value: | 9.99995e-41 |
| Alignm gaps (pig, cow): | 77, 148 |
| Conread position: | 151-502 |
| Cow position: | chr3:75107615-75107946 (view UCSC Genome Browser custom track) |
| Alignm length: | 358 |
| Alignm identity: | 247 |
| Alignm E-value: | 2e-33 |
| Alignm gaps (pig, cow): | 91, 76 |
| Conread position: | 151-506 |
| Cow position: | chr3:60264895-60264543 (view UCSC Genome Browser custom track) |
| Alignm length: | 365 |
| Alignm identity: | 240 |
| Alignm E-value: | 4e-28 |
| Alignm gaps (pig, cow): | 11, 30 |
| Conread position: | 154-492 |
| Cow position: | chr3:19585686-19586028 (view UCSC Genome Browser custom track) |
| Alignm length: | 349 |
| Alignm identity: | 245 |
| Alignm E-value: | 1.4013e-45 |
| Alignm gaps (pig, cow): | 73, 19 |
| Conread position: | 163-376 |
| Cow position: | chr3:55109782-55109565 (view UCSC Genome Browser custom track) |
| Alignm length: | 220 |
| Alignm identity: | 150 |
| Alignm E-value: | 6e-22 |
| Alignm gaps (pig, cow): | 55, 12 |
| Conread position: | 184-509 |
| Cow position: | chr3:3883965-3883638 (view UCSC Genome Browser custom track) |
| Alignm length: | 336 |
| Alignm identity: | 225 |
| Alignm E-value: | 4e-29 |
| Alignm gaps (pig, cow): | 44, 101 |
| Conread position: | 192-501 |
| Cow position: | chr3:78093522-78093220 (view UCSC Genome Browser custom track) |
| Alignm length: | 318 |
| Alignm identity: | 214 |
| Alignm E-value: | 8e-25 |
| Alignm gaps (pig, cow): | 36, 78 |
| Conread position: | 228-453 |
| Cow position: | chr3:19626608-19626381 (view UCSC Genome Browser custom track) |
| Alignm length: | 234 |
| Alignm identity: | 166 |
| Alignm E-value: | 1e-26 |
| Alignm gaps (pig, cow): | 38, 181 |
| Conread position: | 236-513 |
| Cow position: | chr3:71474499-71474221 (view UCSC Genome Browser custom track) |
| Alignm length: | 284 |
| Alignm identity: | 184 |
| Alignm E-value: | 2e-21 |
| Alignm gaps (pig, cow): | 28, 188 |
| Conread position: | 239-509 |
| Cow position: | chr3:69785714-69785437 (view UCSC Genome Browser custom track) |
| Alignm length: | 280 |
| Alignm identity: | 184 |
| Alignm E-value: | 2e-24 |
| Alignm gaps (pig, cow): | 84, 214 |
| Conread position: | 242-527 |
| Cow position: | chr3:64196739-64197025 (view UCSC Genome Browser custom track) |
| Alignm length: | 289 |
| Alignm identity: | 194 |
| Alignm E-value: | 6e-33 |
| Alignm gaps (pig, cow): | 28, 206 |
| Conread position: | 269-502 |
| Cow position: | chr3:23132227-23131994 (view UCSC Genome Browser custom track) |
| Alignm length: | 237 |
| Alignm identity: | 158 |
| Alignm E-value: | 6e-23 |
| Alignm gaps (pig, cow): | 132, 9 |
Show alignments to all cow chromosomes.