Cow genome map
| Conread name: | Pig3-SRG8021P10 |
| Conread position: | 1-360 |
| Cow position: | chr5:31145058-31144705 (view UCSC Genome Browser custom track) |
| Alignm length: | 373 |
| Alignm identity: | 270 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 19, 46 |
| Conread position: | 1-397 |
| Cow position: | chr5:20407939-20407559 (view UCSC Genome Browser custom track) |
| Alignm length: | 399 |
| Alignm identity: | 274 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 19, 40 |
| Conread position: | 1-501 |
| Cow position: | chr5:30276419-30276911 (view UCSC Genome Browser custom track) |
| Alignm length: | 509 |
| Alignm identity: | 355 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 19, 47 |
| Conread position: | 1-506 |
| Cow position: | chr5:17087306-17086788 (view UCSC Genome Browser custom track) |
| Alignm length: | 525 |
| Alignm identity: | 380 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 25, 47 |
| Conread position: | 1-509 |
| Cow position: | chr5:21617179-21617687 (view UCSC Genome Browser custom track) |
| Alignm length: | 518 |
| Alignm identity: | 377 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 19, 47 |
| Conread position: | 1-517 |
| Cow position: | chr5:65941529-65941010 (view UCSC Genome Browser custom track) |
| Alignm length: | 526 |
| Alignm identity: | 371 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 19, 47 |
| Conread position: | 1-528 |
| Cow position: | chr5:35826317-35826849 (view UCSC Genome Browser custom track) |
| Alignm length: | 545 |
| Alignm identity: | 381 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 68, 24 |
| Conread position: | 1-538 |
| Cow position: | chr5:12873472-12874017 (view UCSC Genome Browser custom track) |
| Alignm length: | 558 |
| Alignm identity: | 366 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 74, 13 |
| Conread position: | 2-511 |
| Cow position: | chr5:66257370-66257868 (view UCSC Genome Browser custom track) |
| Alignm length: | 516 |
| Alignm identity: | 353 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 67, 23 |
| Conread position: | 3-541 |
| Cow position: | chr5:59082466-59081933 (view UCSC Genome Browser custom track) |
| Alignm length: | 553 |
| Alignm identity: | 362 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 26, 38 |
| Conread position: | 9-528 |
| Cow position: | chr5:32394330-32394854 (view UCSC Genome Browser custom track) |
| Alignm length: | 537 |
| Alignm identity: | 339 |
| Alignm E-value: | 2e-32 |
| Alignm gaps (pig, cow): | 11, 54 |
| Conread position: | 13-360 |
| Cow position: | chr5:34638622-34638966 (view UCSC Genome Browser custom track) |
| Alignm length: | 353 |
| Alignm identity: | 263 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 61, 34 |
| Conread position: | 34-551 |
| Cow position: | chr5:55967127-55966602 (view UCSC Genome Browser custom track) |
| Alignm length: | 533 |
| Alignm identity: | 361 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 40, 246 |
| Conread position: | 35-389 |
| Cow position: | chr5:43992082-43992435 (view UCSC Genome Browser custom track) |
| Alignm length: | 362 |
| Alignm identity: | 236 |
| Alignm E-value: | 5e-32 |
| Alignm gaps (pig, cow): | 34, 70 |
| Conread position: | 36-508 |
| Cow position: | chr5:21828622-21829095 (view UCSC Genome Browser custom track) |
| Alignm length: | 482 |
| Alignm identity: | 346 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 38, 122 |
| Conread position: | 41-370 |
| Cow position: | chr5:37646789-37646451 (view UCSC Genome Browser custom track) |
| Alignm length: | 341 |
| Alignm identity: | 250 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 33, 138 |
| Conread position: | 47-508 |
| Cow position: | chr5:72895461-72895917 (view UCSC Genome Browser custom track) |
| Alignm length: | 471 |
| Alignm identity: | 302 |
| Alignm E-value: | 8e-37 |
| Alignm gaps (pig, cow): | 24, 91 |
| Conread position: | 48-375 |
| Cow position: | chr5:32697043-32696726 (view UCSC Genome Browser custom track) |
| Alignm length: | 332 |
| Alignm identity: | 238 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 26, 79 |
| Conread position: | 49-387 |
| Cow position: | chr5:64137022-64137365 (view UCSC Genome Browser custom track) |
| Alignm length: | 348 |
| Alignm identity: | 226 |
| Alignm E-value: | 4e-31 |
| Alignm gaps (pig, cow): | 19, 89 |
| Conread position: | 49-537 |
| Cow position: | chr5:57074564-57074077 (view UCSC Genome Browser custom track) |
| Alignm length: | 501 |
| Alignm identity: | 349 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 25, 115 |
| Conread position: | 49-554 |
| Cow position: | chr5:36868516-36869015 (view UCSC Genome Browser custom track) |
| Alignm length: | 512 |
| Alignm identity: | 319 |
| Alignm E-value: | 9e-38 |
| Alignm gaps (pig, cow): | 20, 97 |
| Conread position: | 53-539 |
| Cow position: | chr5:64176346-64175868 (view UCSC Genome Browser custom track) |
| Alignm length: | 491 |
| Alignm identity: | 328 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 20, 175 |
| Conread position: | 60-428 |
| Cow position: | chr5:62142452-62142823 (view UCSC Genome Browser custom track) |
| Alignm length: | 379 |
| Alignm identity: | 254 |
| Alignm E-value: | 1e-39 |
| Alignm gaps (pig, cow): | 13, 86 |
| Conread position: | 78-442 |
| Cow position: | chr5:23169018-23168655 (view UCSC Genome Browser custom track) |
| Alignm length: | 376 |
| Alignm identity: | 263 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 148, 59 |
| Conread position: | 78-523 |
| Cow position: | chr5:45409126-45409574 (view UCSC Genome Browser custom track) |
| Alignm length: | 462 |
| Alignm identity: | 294 |
| Alignm E-value: | 4e-29 |
| Alignm gaps (pig, cow): | 22, 70 |
| Conread position: | 87-375 |
| Cow position: | chr5:6286617-6286336 (view UCSC Genome Browser custom track) |
| Alignm length: | 290 |
| Alignm identity: | 205 |
| Alignm E-value: | 1e-39 |
| Alignm gaps (pig, cow): | 157, 61 |
| Conread position: | 102-376 |
| Cow position: | chr5:69520715-69520989 (view UCSC Genome Browser custom track) |
| Alignm length: | 278 |
| Alignm identity: | 182 |
| Alignm E-value: | 3e-26 |
| Alignm gaps (pig, cow): | 109, 44 |
| Conread position: | 107-508 |
| Cow position: | chr5:56014564-56014954 (view UCSC Genome Browser custom track) |
| Alignm length: | 404 |
| Alignm identity: | 278 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 164, 50 |
| Conread position: | 109-399 |
| Cow position: | chr5:30950088-30949794 (view UCSC Genome Browser custom track) |
| Alignm length: | 296 |
| Alignm identity: | 207 |
| Alignm E-value: | 4.99983e-42 |
| Alignm gaps (pig, cow): | 116, 135 |
| Conread position: | 120-507 |
| Cow position: | chr5:3582415-3582785 (view UCSC Genome Browser custom track) |
| Alignm length: | 389 |
| Alignm identity: | 259 |
| Alignm E-value: | 3e-37 |
| Alignm gaps (pig, cow): | 281, 20 |
| Conread position: | 130-370 |
| Cow position: | chr5:36255411-36255165 (view UCSC Genome Browser custom track) |
| Alignm length: | 247 |
| Alignm identity: | 161 |
| Alignm E-value: | 5e-22 |
| Alignm gaps (pig, cow): | 66, 0 |
| Conread position: | 141-375 |
| Cow position: | chr5:7755702-7755472 (view UCSC Genome Browser custom track) |
| Alignm length: | 239 |
| Alignm identity: | 165 |
| Alignm E-value: | 7e-25 |
| Alignm gaps (pig, cow): | 84, 128 |
| Conread position: | 147-507 |
| Cow position: | chr5:991332-991703 (view UCSC Genome Browser custom track) |
| Alignm length: | 378 |
| Alignm identity: | 253 |
| Alignm E-value: | 2e-34 |
| Alignm gaps (pig, cow): | 71, 124 |
| Conread position: | 198-502 |
| Cow position: | chr5:43402817-43403134 (view UCSC Genome Browser custom track) |
| Alignm length: | 320 |
| Alignm identity: | 220 |
| Alignm E-value: | 6e-34 |
| Alignm gaps (pig, cow): | 22, 263 |
Show alignments to all cow chromosomes.