Cow genome map
| Conread name: | Pig3-SRG8021P10 |
| Conread position: | 1-375 |
| Cow position: | chrX:7571631-7572003 (view UCSC Genome Browser custom track) |
| Alignm length: | 382 |
| Alignm identity: | 269 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 19, 47 |
| Conread position: | 1-509 |
| Cow position: | chrX:9651320-9650794 (view UCSC Genome Browser custom track) |
| Alignm length: | 534 |
| Alignm identity: | 349 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 19, 40 |
| Conread position: | 1-510 |
| Cow position: | chrX:45430293-45429795 (view UCSC Genome Browser custom track) |
| Alignm length: | 514 |
| Alignm identity: | 343 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 19, 44 |
| Conread position: | 1-528 |
| Cow position: | chrX:31436205-31436722 (view UCSC Genome Browser custom track) |
| Alignm length: | 537 |
| Alignm identity: | 361 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 19, 43 |
| Conread position: | 3-509 |
| Cow position: | chrX:4996338-4996824 (view UCSC Genome Browser custom track) |
| Alignm length: | 517 |
| Alignm identity: | 341 |
| Alignm E-value: | 3.00004e-41 |
| Alignm gaps (pig, cow): | 11, 45 |
| Conread position: | 9-430 |
| Cow position: | chrX:34502656-34503078 (view UCSC Genome Browser custom track) |
| Alignm length: | 433 |
| Alignm identity: | 301 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 10, 21 |
| Conread position: | 9-440 |
| Cow position: | chrX:17725711-17726146 (view UCSC Genome Browser custom track) |
| Alignm length: | 445 |
| Alignm identity: | 304 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 11, 38 |
| Conread position: | 18-526 |
| Cow position: | chrX:9360622-9361135 (view UCSC Genome Browser custom track) |
| Alignm length: | 525 |
| Alignm identity: | 339 |
| Alignm E-value: | 2.99878e-43 |
| Alignm gaps (pig, cow): | 23, 6 |
| Conread position: | 22-514 |
| Cow position: | chrX:24366082-24365583 (view UCSC Genome Browser custom track) |
| Alignm length: | 508 |
| Alignm identity: | 329 |
| Alignm E-value: | 9.94922e-44 |
| Alignm gaps (pig, cow): | 127, 25 |
| Conread position: | 37-481 |
| Cow position: | chrX:17794745-17795186 (view UCSC Genome Browser custom track) |
| Alignm length: | 454 |
| Alignm identity: | 324 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 32, 111 |
| Conread position: | 40-509 |
| Cow position: | chrX:11939161-11938719 (view UCSC Genome Browser custom track) |
| Alignm length: | 472 |
| Alignm identity: | 327 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 279, 34 |
| Conread position: | 40-526 |
| Cow position: | chrX:27432156-27431672 (view UCSC Genome Browser custom track) |
| Alignm length: | 496 |
| Alignm identity: | 351 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 34, 232 |
| Conread position: | 41-375 |
| Cow position: | chrX:15814861-15815182 (view UCSC Genome Browser custom track) |
| Alignm length: | 339 |
| Alignm identity: | 237 |
| Alignm E-value: | 8.00001e-41 |
| Alignm gaps (pig, cow): | 28, 88 |
| Conread position: | 41-505 |
| Cow position: | chrX:9252414-9251933 (view UCSC Genome Browser custom track) |
| Alignm length: | 487 |
| Alignm identity: | 336 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 29, 85 |
| Conread position: | 44-519 |
| Cow position: | chrX:9201314-9201789 (view UCSC Genome Browser custom track) |
| Alignm length: | 483 |
| Alignm identity: | 331 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 174, 234 |
| Conread position: | 46-528 |
| Cow position: | chrX:12980060-12979579 (view UCSC Genome Browser custom track) |
| Alignm length: | 492 |
| Alignm identity: | 338 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 28, 10 |
| Conread position: | 60-517 |
| Cow position: | chrX:37781330-37780870 (view UCSC Genome Browser custom track) |
| Alignm length: | 467 |
| Alignm identity: | 330 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 105, 14 |
| Conread position: | 68-507 |
| Cow position: | chrX:29542427-29541996 (view UCSC Genome Browser custom track) |
| Alignm length: | 446 |
| Alignm identity: | 313 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 160, 69 |
| Conread position: | 68-523 |
| Cow position: | chrX:34411631-34412094 (view UCSC Genome Browser custom track) |
| Alignm length: | 471 |
| Alignm identity: | 332 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 12, 108 |
| Conread position: | 70-534 |
| Cow position: | chrX:46587611-46588080 (view UCSC Genome Browser custom track) |
| Alignm length: | 479 |
| Alignm identity: | 312 |
| Alignm E-value: | 3.00018e-42 |
| Alignm gaps (pig, cow): | 130, 79 |
| Conread position: | 87-426 |
| Cow position: | chrX:31311836-31312181 (view UCSC Genome Browser custom track) |
| Alignm length: | 346 |
| Alignm identity: | 246 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 145, 0 |
| Conread position: | 88-432 |
| Cow position: | chrX:42235722-42235367 (view UCSC Genome Browser custom track) |
| Alignm length: | 357 |
| Alignm identity: | 234 |
| Alignm E-value: | 4e-33 |
| Alignm gaps (pig, cow): | 42, 66 |
| Conread position: | 89-369 |
| Cow position: | chrX:47362799-47362532 (view UCSC Genome Browser custom track) |
| Alignm length: | 283 |
| Alignm identity: | 190 |
| Alignm E-value: | 1e-24 |
| Alignm gaps (pig, cow): | 48, 65 |
| Conread position: | 93-434 |
| Cow position: | chrX:36067836-36068175 (view UCSC Genome Browser custom track) |
| Alignm length: | 350 |
| Alignm identity: | 236 |
| Alignm E-value: | 2e-36 |
| Alignm gaps (pig, cow): | 135, 60 |
| Conread position: | 104-517 |
| Cow position: | chrX:6407376-6407786 (view UCSC Genome Browser custom track) |
| Alignm length: | 424 |
| Alignm identity: | 276 |
| Alignm E-value: | 4e-33 |
| Alignm gaps (pig, cow): | 108, 63 |
| Conread position: | 110-501 |
| Cow position: | chrX:8917226-8917621 (view UCSC Genome Browser custom track) |
| Alignm length: | 402 |
| Alignm identity: | 262 |
| Alignm E-value: | 5e-36 |
| Alignm gaps (pig, cow): | 81, 168 |
| Conread position: | 127-372 |
| Cow position: | chrX:29680409-29680166 (view UCSC Genome Browser custom track) |
| Alignm length: | 251 |
| Alignm identity: | 173 |
| Alignm E-value: | 2e-27 |
| Alignm gaps (pig, cow): | 85, 18 |
| Conread position: | 136-524 |
| Cow position: | chrX:5919352-5919734 (view UCSC Genome Browser custom track) |
| Alignm length: | 396 |
| Alignm identity: | 265 |
| Alignm E-value: | 7e-39 |
| Alignm gaps (pig, cow): | 126, 96 |
| Conread position: | 164-530 |
| Cow position: | chrX:46291023-46291394 (view UCSC Genome Browser custom track) |
| Alignm length: | 380 |
| Alignm identity: | 241 |
| Alignm E-value: | 1e-22 |
| Alignm gaps (pig, cow): | 54, 14 |
| Conread position: | 172-528 |
| Cow position: | chrX:34837163-34836820 (view UCSC Genome Browser custom track) |
| Alignm length: | 361 |
| Alignm identity: | 250 |
| Alignm E-value: | 7e-40 |
| Alignm gaps (pig, cow): | 5, 53 |
| Conread position: | 188-509 |
| Cow position: | chrX:1466069-1466402 (view UCSC Genome Browser custom track) |
| Alignm length: | 335 |
| Alignm identity: | 232 |
| Alignm E-value: | 8.00001e-41 |
| Alignm gaps (pig, cow): | 30, 264 |
| Conread position: | 189-509 |
| Cow position: | chrX:29050156-29050477 (view UCSC Genome Browser custom track) |
| Alignm length: | 329 |
| Alignm identity: | 220 |
| Alignm E-value: | 3e-32 |
| Alignm gaps (pig, cow): | 29, 89 |
| Conread position: | 220-506 |
| Cow position: | chrX:20957191-20957469 (view UCSC Genome Browser custom track) |
| Alignm length: | 295 |
| Alignm identity: | 201 |
| Alignm E-value: | 1e-22 |
| Alignm gaps (pig, cow): | 9, 46 |
| Conread position: | 228-508 |
| Cow position: | chrX:22393034-22392753 (view UCSC Genome Browser custom track) |
| Alignm length: | 287 |
| Alignm identity: | 194 |
| Alignm E-value: | 2e-29 |
| Alignm gaps (pig, cow): | 44, 134 |
| Conread position: | 234-525 |
| Cow position: | chrX:27306410-27306688 (view UCSC Genome Browser custom track) |
| Alignm length: | 293 |
| Alignm identity: | 195 |
| Alignm E-value: | 5e-25 |
| Alignm gaps (pig, cow): | 33, 165 |
| Conread position: | 239-518 |
| Cow position: | chrX:19394515-19394803 (view UCSC Genome Browser custom track) |
| Alignm length: | 293 |
| Alignm identity: | 192 |
| Alignm E-value: | 1e-22 |
| Alignm gaps (pig, cow): | 159, 196 |
Show alignments to all cow chromosomes.