Cow genome map
| Conread name: | Pig3-SRG8022L11 |
| Conread position: | 161-287 |
| Cow position: | chr12:2964001-2964126 (view UCSC Genome Browser custom track) |
| Alignm length: | 127 |
| Alignm identity: | 98 |
| Alignm E-value: | 8e-23 |
| Alignm gaps (pig, cow): | 94, 0 |
| Conread position: | 165-288 |
| Cow position: | chr12:16434916-16434794 (view UCSC Genome Browser custom track) |
| Alignm length: | 125 |
| Alignm identity: | 102 |
| Alignm E-value: | 1e-25 |
| Alignm gaps (pig, cow): | 47, 13 |
| Conread position: | 169-351 |
| Cow position: | chr12:18020817-18021003 (view UCSC Genome Browser custom track) |
| Alignm length: | 190 |
| Alignm identity: | 136 |
| Alignm E-value: | 7e-22 |
| Alignm gaps (pig, cow): | 43, 88 |
| Conread position: | 171-304 |
| Cow position: | chr12:41159551-41159684 (view UCSC Genome Browser custom track) |
| Alignm length: | 135 |
| Alignm identity: | 105 |
| Alignm E-value: | 1e-24 |
| Alignm gaps (pig, cow): | 129, 82 |
| Conread position: | 172-296 |
| Cow position: | chr12:48578805-48578930 (view UCSC Genome Browser custom track) |
| Alignm length: | 128 |
| Alignm identity: | 100 |
| Alignm E-value: | 2e-21 |
| Alignm gaps (pig, cow): | 37, 84 |
| Conread position: | 174-293 |
| Cow position: | chr12:25561334-25561454 (view UCSC Genome Browser custom track) |
| Alignm length: | 122 |
| Alignm identity: | 96 |
| Alignm E-value: | 2e-21 |
| Alignm gaps (pig, cow): | 35, 83 |
| Conread position: | 174-295 |
| Cow position: | chr12:37514317-37514195 (view UCSC Genome Browser custom track) |
| Alignm length: | 125 |
| Alignm identity: | 98 |
| Alignm E-value: | 7e-21 |
| Alignm gaps (pig, cow): | 37, 84 |
| Conread position: | 174-295 |
| Cow position: | chr12:45092410-45092533 (view UCSC Genome Browser custom track) |
| Alignm length: | 125 |
| Alignm identity: | 97 |
| Alignm E-value: | 7e-21 |
| Alignm gaps (pig, cow): | 35, 84 |
| Conread position: | 174-296 |
| Cow position: | chr12:6139617-6139489 (view UCSC Genome Browser custom track) |
| Alignm length: | 130 |
| Alignm identity: | 104 |
| Alignm E-value: | 7e-22 |
| Alignm gaps (pig, cow): | 12, 85 |
| Conread position: | 174-296 |
| Cow position: | chr12:14986713-14986836 (view UCSC Genome Browser custom track) |
| Alignm length: | 126 |
| Alignm identity: | 104 |
| Alignm E-value: | 4e-26 |
| Alignm gaps (pig, cow): | 37, 84 |
| Conread position: | 174-296 |
| Cow position: | chr12:15122288-15122414 (view UCSC Genome Browser custom track) |
| Alignm length: | 128 |
| Alignm identity: | 101 |
| Alignm E-value: | 2e-21 |
| Alignm gaps (pig, cow): | 16, 86 |
| Conread position: | 174-296 |
| Cow position: | chr12:15260727-15260849 (view UCSC Genome Browser custom track) |
| Alignm length: | 126 |
| Alignm identity: | 101 |
| Alignm E-value: | 8e-23 |
| Alignm gaps (pig, cow): | 37, 95 |
| Conread position: | 174-305 |
| Cow position: | chr12:27037486-27037354 (view UCSC Genome Browser custom track) |
| Alignm length: | 135 |
| Alignm identity: | 109 |
| Alignm E-value: | 1e-26 |
| Alignm gaps (pig, cow): | 37, 84 |
| Conread position: | 174-316 |
| Cow position: | chr12:15703533-15703388 (view UCSC Genome Browser custom track) |
| Alignm length: | 147 |
| Alignm identity: | 112 |
| Alignm E-value: | 3e-23 |
| Alignm gaps (pig, cow): | 37, 83 |
| Conread position: | 174-331 |
| Cow position: | chr12:29770608-29770455 (view UCSC Genome Browser custom track) |
| Alignm length: | 160 |
| Alignm identity: | 121 |
| Alignm E-value: | 9e-24 |
| Alignm gaps (pig, cow): | 143, 33 |
| Conread position: | 174-331 |
| Cow position: | chr12:33319704-33319542 (view UCSC Genome Browser custom track) |
| Alignm length: | 165 |
| Alignm identity: | 126 |
| Alignm E-value: | 1e-24 |
| Alignm gaps (pig, cow): | 37, 84 |
| Conread position: | 174-337 |
| Cow position: | chr12:27572276-27572111 (view UCSC Genome Browser custom track) |
| Alignm length: | 169 |
| Alignm identity: | 130 |
| Alignm E-value: | 1e-27 |
| Alignm gaps (pig, cow): | 37, 82 |
| Conread position: | 174-351 |
| Cow position: | chr12:34148397-34148214 (view UCSC Genome Browser custom track) |
| Alignm length: | 185 |
| Alignm identity: | 134 |
| Alignm E-value: | 3e-24 |
| Alignm gaps (pig, cow): | 35, 129 |
| Conread position: | 174-351 |
| Cow position: | chr12:44622319-44622485 (view UCSC Genome Browser custom track) |
| Alignm length: | 178 |
| Alignm identity: | 136 |
| Alignm E-value: | 4e-27 |
| Alignm gaps (pig, cow): | 27, 0 |
| Conread position: | 174-356 |
| Cow position: | chr12:19502464-19502289 (view UCSC Genome Browser custom track) |
| Alignm length: | 186 |
| Alignm identity: | 136 |
| Alignm E-value: | 7e-22 |
| Alignm gaps (pig, cow): | 33, 84 |
| Conread position: | 175-293 |
| Cow position: | chr12:29731279-29731399 (view UCSC Genome Browser custom track) |
| Alignm length: | 122 |
| Alignm identity: | 99 |
| Alignm E-value: | 3e-24 |
| Alignm gaps (pig, cow): | 33, 83 |
| Conread position: | 175-296 |
| Cow position: | chr12:23714640-23714763 (view UCSC Genome Browser custom track) |
| Alignm length: | 125 |
| Alignm identity: | 102 |
| Alignm E-value: | 3e-25 |
| Alignm gaps (pig, cow): | 30, 82 |
| Conread position: | 175-453 |
| Cow position: | chr12:26151495-26151216 (view UCSC Genome Browser custom track) |
| Alignm length: | 286 |
| Alignm identity: | 191 |
| Alignm E-value: | 1e-24 |
| Alignm gaps (pig, cow): | 25, 83 |
| Conread position: | 176-295 |
| Cow position: | chr12:26777223-26777104 (view UCSC Genome Browser custom track) |
| Alignm length: | 122 |
| Alignm identity: | 97 |
| Alignm E-value: | 7e-22 |
| Alignm gaps (pig, cow): | 32, 47 |
| Conread position: | 181-324 |
| Cow position: | chr12:1766883-1767026 (view UCSC Genome Browser custom track) |
| Alignm length: | 145 |
| Alignm identity: | 109 |
| Alignm E-value: | 9e-24 |
| Alignm gaps (pig, cow): | 117, 74 |
| Conread position: | 184-325 |
| Cow position: | chr12:32715019-32715162 (view UCSC Genome Browser custom track) |
| Alignm length: | 147 |
| Alignm identity: | 113 |
| Alignm E-value: | 7e-22 |
| Alignm gaps (pig, cow): | 24, 34 |
| Conread position: | 202-351 |
| Cow position: | chr12:24186498-24186351 (view UCSC Genome Browser custom track) |
| Alignm length: | 152 |
| Alignm identity: | 118 |
| Alignm E-value: | 1e-25 |
| Alignm gaps (pig, cow): | 9, 55 |
| Conread position: | 205-328 |
| Cow position: | chr12:7514811-7514933 (view UCSC Genome Browser custom track) |
| Alignm length: | 125 |
| Alignm identity: | 97 |
| Alignm E-value: | 7e-21 |
| Alignm gaps (pig, cow): | 101, 48 |
Show alignments to all cow chromosomes.