Cow genome map
| Conread name: | Pig3-SRG8022L11 |
| Conread position: | 172-349 |
| Cow position: | chr19:43373028-43373198 (view UCSC Genome Browser custom track) |
| Alignm length: | 181 |
| Alignm identity: | 132 |
| Alignm E-value: | 8e-21 |
| Alignm gaps (pig, cow): | 33, 84 |
| Conread position: | 172-363 |
| Cow position: | chr19:13316429-13316242 (view UCSC Genome Browser custom track) |
| Alignm length: | 193 |
| Alignm identity: | 137 |
| Alignm E-value: | 1e-24 |
| Alignm gaps (pig, cow): | 32, 41 |
| Conread position: | 172-413 |
| Cow position: | chr19:50682453-50682210 (view UCSC Genome Browser custom track) |
| Alignm length: | 247 |
| Alignm identity: | 163 |
| Alignm E-value: | 3e-21 |
| Alignm gaps (pig, cow): | 134, 81 |
| Conread position: | 172-432 |
| Cow position: | chr19:6079369-6079117 (view UCSC Genome Browser custom track) |
| Alignm length: | 265 |
| Alignm identity: | 180 |
| Alignm E-value: | 1e-24 |
| Alignm gaps (pig, cow): | 115, 77 |
| Conread position: | 173-406 |
| Cow position: | chr19:42236018-42236253 (view UCSC Genome Browser custom track) |
| Alignm length: | 240 |
| Alignm identity: | 160 |
| Alignm E-value: | 8e-21 |
| Alignm gaps (pig, cow): | 34, 83 |
| Conread position: | 174-282 |
| Cow position: | chr19:20670915-20670805 (view UCSC Genome Browser custom track) |
| Alignm length: | 112 |
| Alignm identity: | 91 |
| Alignm E-value: | 3e-21 |
| Alignm gaps (pig, cow): | 37, 84 |
| Conread position: | 174-287 |
| Cow position: | chr19:23087975-23088090 (view UCSC Genome Browser custom track) |
| Alignm length: | 117 |
| Alignm identity: | 98 |
| Alignm E-value: | 1e-25 |
| Alignm gaps (pig, cow): | 37, 84 |
| Conread position: | 174-289 |
| Cow position: | chr19:25832208-25832091 (view UCSC Genome Browser custom track) |
| Alignm length: | 119 |
| Alignm identity: | 94 |
| Alignm E-value: | 8e-21 |
| Alignm gaps (pig, cow): | 33, 84 |
| Conread position: | 174-289 |
| Cow position: | chr19:25835336-25835222 (view UCSC Genome Browser custom track) |
| Alignm length: | 116 |
| Alignm identity: | 91 |
| Alignm E-value: | 3e-21 |
| Alignm gaps (pig, cow): | 81, 0 |
| Conread position: | 174-292 |
| Cow position: | chr19:38500158-38500275 (view UCSC Genome Browser custom track) |
| Alignm length: | 119 |
| Alignm identity: | 98 |
| Alignm E-value: | 1e-26 |
| Alignm gaps (pig, cow): | 81, 0 |
| Conread position: | 174-292 |
| Cow position: | chr19:47671735-47671855 (view UCSC Genome Browser custom track) |
| Alignm length: | 122 |
| Alignm identity: | 99 |
| Alignm E-value: | 4e-24 |
| Alignm gaps (pig, cow): | 37, 84 |
| Conread position: | 174-293 |
| Cow position: | chr19:5656133-5656012 (view UCSC Genome Browser custom track) |
| Alignm length: | 123 |
| Alignm identity: | 97 |
| Alignm E-value: | 9e-22 |
| Alignm gaps (pig, cow): | 37, 84 |
| Conread position: | 174-294 |
| Cow position: | chr19:4117372-4117250 (view UCSC Genome Browser custom track) |
| Alignm length: | 124 |
| Alignm identity: | 99 |
| Alignm E-value: | 3e-23 |
| Alignm gaps (pig, cow): | 36, 82 |
| Conread position: | 174-294 |
| Cow position: | chr19:11646558-11646680 (view UCSC Genome Browser custom track) |
| Alignm length: | 124 |
| Alignm identity: | 97 |
| Alignm E-value: | 3e-21 |
| Alignm gaps (pig, cow): | 32, 84 |
| Conread position: | 174-294 |
| Cow position: | chr19:16105089-16104969 (view UCSC Genome Browser custom track) |
| Alignm length: | 124 |
| Alignm identity: | 99 |
| Alignm E-value: | 3e-21 |
| Alignm gaps (pig, cow): | 34, 84 |
| Conread position: | 174-296 |
| Cow position: | chr19:7637244-7637121 (view UCSC Genome Browser custom track) |
| Alignm length: | 126 |
| Alignm identity: | 100 |
| Alignm E-value: | 3e-22 |
| Alignm gaps (pig, cow): | 37, 82 |
| Conread position: | 174-296 |
| Cow position: | chr19:23784424-23784304 (view UCSC Genome Browser custom track) |
| Alignm length: | 123 |
| Alignm identity: | 95 |
| Alignm E-value: | 8e-21 |
| Alignm gaps (pig, cow): | 17, 0 |
| Conread position: | 174-296 |
| Cow position: | chr19:33903432-33903310 (view UCSC Genome Browser custom track) |
| Alignm length: | 124 |
| Alignm identity: | 97 |
| Alignm E-value: | 3e-22 |
| Alignm gaps (pig, cow): | 109, 82 |
| Conread position: | 174-296 |
| Cow position: | chr19:49221630-49221506 (view UCSC Genome Browser custom track) |
| Alignm length: | 126 |
| Alignm identity: | 98 |
| Alignm E-value: | 3e-21 |
| Alignm gaps (pig, cow): | 37, 82 |
| Conread position: | 174-303 |
| Cow position: | chr19:23889496-23889366 (view UCSC Genome Browser custom track) |
| Alignm length: | 134 |
| Alignm identity: | 105 |
| Alignm E-value: | 3e-21 |
| Alignm gaps (pig, cow): | 33, 84 |
| Conread position: | 174-315 |
| Cow position: | chr19:25763105-25763246 (view UCSC Genome Browser custom track) |
| Alignm length: | 143 |
| Alignm identity: | 115 |
| Alignm E-value: | 2e-30 |
| Alignm gaps (pig, cow): | 127, 78 |
| Conread position: | 174-323 |
| Cow position: | chr19:28135554-28135706 (view UCSC Genome Browser custom track) |
| Alignm length: | 156 |
| Alignm identity: | 119 |
| Alignm E-value: | 1e-22 |
| Alignm gaps (pig, cow): | 37, 22 |
| Conread position: | 174-324 |
| Cow position: | chr19:34620037-34619885 (view UCSC Genome Browser custom track) |
| Alignm length: | 156 |
| Alignm identity: | 118 |
| Alignm E-value: | 3e-22 |
| Alignm gaps (pig, cow): | 34, 61 |
| Conread position: | 174-332 |
| Cow position: | chr19:8375311-8375150 (view UCSC Genome Browser custom track) |
| Alignm length: | 164 |
| Alignm identity: | 123 |
| Alignm E-value: | 1e-23 |
| Alignm gaps (pig, cow): | 32, 84 |
| Conread position: | 174-344 |
| Cow position: | chr19:18786330-18786164 (view UCSC Genome Browser custom track) |
| Alignm length: | 174 |
| Alignm identity: | 131 |
| Alignm E-value: | 4e-25 |
| Alignm gaps (pig, cow): | 37, 25 |
| Conread position: | 174-351 |
| Cow position: | chr19:35018251-35018079 (view UCSC Genome Browser custom track) |
| Alignm length: | 178 |
| Alignm identity: | 129 |
| Alignm E-value: | 4e-24 |
| Alignm gaps (pig, cow): | 78, 0 |
| Conread position: | 174-351 |
| Cow position: | chr19:36059929-36060107 (view UCSC Genome Browser custom track) |
| Alignm length: | 181 |
| Alignm identity: | 133 |
| Alignm E-value: | 5e-27 |
| Alignm gaps (pig, cow): | 29, 82 |
| Conread position: | 174-362 |
| Cow position: | chr19:15068017-15067818 (view UCSC Genome Browser custom track) |
| Alignm length: | 202 |
| Alignm identity: | 148 |
| Alignm E-value: | 3e-22 |
| Alignm gaps (pig, cow): | 17, 85 |
| Conread position: | 174-378 |
| Cow position: | chr19:39576577-39576368 (view UCSC Genome Browser custom track) |
| Alignm length: | 214 |
| Alignm identity: | 152 |
| Alignm E-value: | 1e-22 |
| Alignm gaps (pig, cow): | 33, 84 |
| Conread position: | 174-379 |
| Cow position: | chr19:23756751-23756543 (view UCSC Genome Browser custom track) |
| Alignm length: | 211 |
| Alignm identity: | 145 |
| Alignm E-value: | 3e-22 |
| Alignm gaps (pig, cow): | 31, 80 |
| Conread position: | 174-408 |
| Cow position: | chr19:34758011-34757779 (view UCSC Genome Browser custom track) |
| Alignm length: | 242 |
| Alignm identity: | 172 |
| Alignm E-value: | 5e-28 |
| Alignm gaps (pig, cow): | 37, 84 |
| Conread position: | 175-315 |
| Cow position: | chr19:21378477-21378339 (view UCSC Genome Browser custom track) |
| Alignm length: | 144 |
| Alignm identity: | 112 |
| Alignm E-value: | 1e-22 |
| Alignm gaps (pig, cow): | 36, 83 |
| Conread position: | 175-323 |
| Cow position: | chr19:21538058-21538204 (view UCSC Genome Browser custom track) |
| Alignm length: | 150 |
| Alignm identity: | 112 |
| Alignm E-value: | 3e-22 |
| Alignm gaps (pig, cow): | 142, 82 |
| Conread position: | 175-324 |
| Cow position: | chr19:22438638-22438786 (view UCSC Genome Browser custom track) |
| Alignm length: | 155 |
| Alignm identity: | 119 |
| Alignm E-value: | 3e-21 |
| Alignm gaps (pig, cow): | 36, 83 |
| Conread position: | 175-350 |
| Cow position: | chr19:17068849-17069026 (view UCSC Genome Browser custom track) |
| Alignm length: | 181 |
| Alignm identity: | 130 |
| Alignm E-value: | 8e-21 |
| Alignm gaps (pig, cow): | 97, 78 |
| Conread position: | 175-351 |
| Cow position: | chr19:4587746-4587573 (view UCSC Genome Browser custom track) |
| Alignm length: | 180 |
| Alignm identity: | 135 |
| Alignm E-value: | 5e-27 |
| Alignm gaps (pig, cow): | 34, 81 |
| Conread position: | 175-351 |
| Cow position: | chr19:21199131-21199302 (view UCSC Genome Browser custom track) |
| Alignm length: | 180 |
| Alignm identity: | 138 |
| Alignm E-value: | 5e-28 |
| Alignm gaps (pig, cow): | 37, 83 |
| Conread position: | 175-420 |
| Cow position: | chr19:20984781-20984538 (view UCSC Genome Browser custom track) |
| Alignm length: | 250 |
| Alignm identity: | 167 |
| Alignm E-value: | 1e-22 |
| Alignm gaps (pig, cow): | 35, 84 |
| Conread position: | 176-292 |
| Cow position: | chr19:34459478-34459360 (view UCSC Genome Browser custom track) |
| Alignm length: | 120 |
| Alignm identity: | 95 |
| Alignm E-value: | 3e-21 |
| Alignm gaps (pig, cow): | 31, 82 |
| Conread position: | 176-295 |
| Cow position: | chr19:29368393-29368510 (view UCSC Genome Browser custom track) |
| Alignm length: | 120 |
| Alignm identity: | 95 |
| Alignm E-value: | 1e-22 |
| Alignm gaps (pig, cow): | 79, 0 |
| Conread position: | 176-295 |
| Cow position: | chr19:29625898-29626015 (view UCSC Genome Browser custom track) |
| Alignm length: | 120 |
| Alignm identity: | 95 |
| Alignm E-value: | 1e-22 |
| Alignm gaps (pig, cow): | 79, 0 |
| Conread position: | 179-296 |
| Cow position: | chr19:26269238-26269119 (view UCSC Genome Browser custom track) |
| Alignm length: | 121 |
| Alignm identity: | 97 |
| Alignm E-value: | 1e-22 |
| Alignm gaps (pig, cow): | 32, 79 |
| Conread position: | 198-351 |
| Cow position: | chr19:13766145-13765995 (view UCSC Genome Browser custom track) |
| Alignm length: | 157 |
| Alignm identity: | 118 |
| Alignm E-value: | 3e-21 |
| Alignm gaps (pig, cow): | 13, 58 |
| Conread position: | 204-450 |
| Cow position: | chr19:14906962-14907205 (view UCSC Genome Browser custom track) |
| Alignm length: | 249 |
| Alignm identity: | 167 |
| Alignm E-value: | 4e-25 |
| Alignm gaps (pig, cow): | 92, 49 |
| Conread position: | 205-350 |
| Cow position: | chr19:20331811-20331669 (view UCSC Genome Browser custom track) |
| Alignm length: | 147 |
| Alignm identity: | 113 |
| Alignm E-value: | 4e-24 |
| Alignm gaps (pig, cow): | 102, 54 |
| Conread position: | 205-419 |
| Cow position: | chr19:14348038-14348246 (view UCSC Genome Browser custom track) |
| Alignm length: | 216 |
| Alignm identity: | 147 |
| Alignm E-value: | 8e-21 |
| Alignm gaps (pig, cow): | 180, 48 |
| Conread position: | 205-466 |
| Cow position: | chr19:17795921-17796167 (view UCSC Genome Browser custom track) |
| Alignm length: | 262 |
| Alignm identity: | 177 |
| Alignm E-value: | 1e-22 |
| Alignm gaps (pig, cow): | 51, 0 |
Show alignments to all cow chromosomes.