Cow genome map
| Conread name: | Pig3-SRG8022L11 |
| Conread position: | 172-288 |
| Cow position: | chr20:36207857-36207975 (view UCSC Genome Browser custom track) |
| Alignm length: | 120 |
| Alignm identity: | 95 |
| Alignm E-value: | 2e-21 |
| Alignm gaps (pig, cow): | 39, 86 |
| Conread position: | 172-288 |
| Cow position: | chr20:36312465-36312347 (view UCSC Genome Browser custom track) |
| Alignm length: | 120 |
| Alignm identity: | 98 |
| Alignm E-value: | 3e-24 |
| Alignm gaps (pig, cow): | 38, 86 |
| Conread position: | 172-294 |
| Cow position: | chr20:13752266-13752391 (view UCSC Genome Browser custom track) |
| Alignm length: | 128 |
| Alignm identity: | 102 |
| Alignm E-value: | 2e-21 |
| Alignm gaps (pig, cow): | 17, 88 |
| Conread position: | 172-295 |
| Cow position: | chr20:382088-381964 (view UCSC Genome Browser custom track) |
| Alignm length: | 126 |
| Alignm identity: | 98 |
| Alignm E-value: | 7e-22 |
| Alignm gaps (pig, cow): | 39, 86 |
| Conread position: | 172-295 |
| Cow position: | chr20:12239637-12239515 (view UCSC Genome Browser custom track) |
| Alignm length: | 124 |
| Alignm identity: | 99 |
| Alignm E-value: | 3e-25 |
| Alignm gaps (pig, cow): | 83, 0 |
| Conread position: | 172-295 |
| Cow position: | chr20:32847388-32847513 (view UCSC Genome Browser custom track) |
| Alignm length: | 127 |
| Alignm identity: | 104 |
| Alignm E-value: | 1e-26 |
| Alignm gaps (pig, cow): | 36, 86 |
| Conread position: | 172-375 |
| Cow position: | chr20:21901869-21902073 (view UCSC Genome Browser custom track) |
| Alignm length: | 207 |
| Alignm identity: | 141 |
| Alignm E-value: | 7e-22 |
| Alignm gaps (pig, cow): | 6, 82 |
| Conread position: | 173-295 |
| Cow position: | chr20:15529905-15530028 (view UCSC Genome Browser custom track) |
| Alignm length: | 126 |
| Alignm identity: | 101 |
| Alignm E-value: | 2e-23 |
| Alignm gaps (pig, cow): | 33, 46 |
| Conread position: | 173-295 |
| Cow position: | chr20:32463476-32463356 (view UCSC Genome Browser custom track) |
| Alignm length: | 123 |
| Alignm identity: | 95 |
| Alignm E-value: | 6e-21 |
| Alignm gaps (pig, cow): | 34, 0 |
| Conread position: | 174-287 |
| Cow position: | chr20:19459620-19459505 (view UCSC Genome Browser custom track) |
| Alignm length: | 117 |
| Alignm identity: | 96 |
| Alignm E-value: | 8e-24 |
| Alignm gaps (pig, cow): | 32, 83 |
| Conread position: | 174-292 |
| Cow position: | chr20:8912453-8912334 (view UCSC Genome Browser custom track) |
| Alignm length: | 122 |
| Alignm identity: | 97 |
| Alignm E-value: | 2e-21 |
| Alignm gaps (pig, cow): | 35, 84 |
| Conread position: | 174-292 |
| Cow position: | chr20:38768415-38768298 (view UCSC Genome Browser custom track) |
| Alignm length: | 119 |
| Alignm identity: | 94 |
| Alignm E-value: | 7e-23 |
| Alignm gaps (pig, cow): | 81, 0 |
| Conread position: | 174-295 |
| Cow position: | chr20:3564205-3564324 (view UCSC Genome Browser custom track) |
| Alignm length: | 122 |
| Alignm identity: | 96 |
| Alignm E-value: | 2e-22 |
| Alignm gaps (pig, cow): | 46, 0 |
| Conread position: | 174-295 |
| Cow position: | chr20:7738186-7738063 (view UCSC Genome Browser custom track) |
| Alignm length: | 125 |
| Alignm identity: | 100 |
| Alignm E-value: | 8e-24 |
| Alignm gaps (pig, cow): | 32, 84 |
| Conread position: | 174-296 |
| Cow position: | chr20:19060792-19060670 (view UCSC Genome Browser custom track) |
| Alignm length: | 124 |
| Alignm identity: | 98 |
| Alignm E-value: | 2e-23 |
| Alignm gaps (pig, cow): | 17, 82 |
| Conread position: | 174-296 |
| Cow position: | chr20:20158181-20158305 (view UCSC Genome Browser custom track) |
| Alignm length: | 126 |
| Alignm identity: | 99 |
| Alignm E-value: | 2e-22 |
| Alignm gaps (pig, cow): | 36, 84 |
| Conread position: | 174-296 |
| Cow position: | chr20:21815606-21815730 (view UCSC Genome Browser custom track) |
| Alignm length: | 126 |
| Alignm identity: | 100 |
| Alignm E-value: | 2e-23 |
| Alignm gaps (pig, cow): | 38, 84 |
| Conread position: | 174-297 |
| Cow position: | chr20:34372657-34372534 (view UCSC Genome Browser custom track) |
| Alignm length: | 125 |
| Alignm identity: | 100 |
| Alignm E-value: | 9e-25 |
| Alignm gaps (pig, cow): | 15, 80 |
| Conread position: | 174-303 |
| Cow position: | chr20:9412533-9412664 (view UCSC Genome Browser custom track) |
| Alignm length: | 133 |
| Alignm identity: | 105 |
| Alignm E-value: | 9e-25 |
| Alignm gaps (pig, cow): | 32, 84 |
| Conread position: | 174-323 |
| Cow position: | chr20:19834785-19834634 (view UCSC Genome Browser custom track) |
| Alignm length: | 155 |
| Alignm identity: | 119 |
| Alignm E-value: | 8e-24 |
| Alignm gaps (pig, cow): | 37, 84 |
| Conread position: | 174-349 |
| Cow position: | chr20:11043427-11043256 (view UCSC Genome Browser custom track) |
| Alignm length: | 177 |
| Alignm identity: | 133 |
| Alignm E-value: | 1e-27 |
| Alignm gaps (pig, cow): | 34, 78 |
| Conread position: | 174-371 |
| Cow position: | chr20:38578715-38578516 (view UCSC Genome Browser custom track) |
| Alignm length: | 203 |
| Alignm identity: | 143 |
| Alignm E-value: | 3e-24 |
| Alignm gaps (pig, cow): | 161, 28 |
| Conread position: | 174-383 |
| Cow position: | chr20:7426152-7425943 (view UCSC Genome Browser custom track) |
| Alignm length: | 215 |
| Alignm identity: | 153 |
| Alignm E-value: | 1e-25 |
| Alignm gaps (pig, cow): | 36, 84 |
| Conread position: | 174-424 |
| Cow position: | chr20:38514824-38515066 (view UCSC Genome Browser custom track) |
| Alignm length: | 254 |
| Alignm identity: | 182 |
| Alignm E-value: | 2e-32 |
| Alignm gaps (pig, cow): | 37, 81 |
| Conread position: | 174-512 |
| Cow position: | chr20:14806932-14807278 (view UCSC Genome Browser custom track) |
| Alignm length: | 351 |
| Alignm identity: | 220 |
| Alignm E-value: | 6e-21 |
| Alignm gaps (pig, cow): | 32, 84 |
| Conread position: | 175-295 |
| Cow position: | chr20:20590255-20590133 (view UCSC Genome Browser custom track) |
| Alignm length: | 124 |
| Alignm identity: | 100 |
| Alignm E-value: | 3e-24 |
| Alignm gaps (pig, cow): | 36, 83 |
| Conread position: | 175-296 |
| Cow position: | chr20:12581908-12581786 (view UCSC Genome Browser custom track) |
| Alignm length: | 125 |
| Alignm identity: | 104 |
| Alignm E-value: | 1e-26 |
| Alignm gaps (pig, cow): | 36, 83 |
| Conread position: | 178-295 |
| Cow position: | chr20:3255085-3255205 (view UCSC Genome Browser custom track) |
| Alignm length: | 121 |
| Alignm identity: | 95 |
| Alignm E-value: | 7e-22 |
| Alignm gaps (pig, cow): | 32, 0 |
| Conread position: | 184-350 |
| Cow position: | chr20:5826995-5827168 (view UCSC Genome Browser custom track) |
| Alignm length: | 175 |
| Alignm identity: | 126 |
| Alignm E-value: | 6e-21 |
| Alignm gaps (pig, cow): | 25, 75 |
| Conread position: | 202-363 |
| Cow position: | chr20:20739211-20739052 (view UCSC Genome Browser custom track) |
| Alignm length: | 163 |
| Alignm identity: | 118 |
| Alignm E-value: | 7e-22 |
| Alignm gaps (pig, cow): | 115, 51 |
| Conread position: | 205-458 |
| Cow position: | chr20:36023321-36023071 (view UCSC Genome Browser custom track) |
| Alignm length: | 257 |
| Alignm identity: | 173 |
| Alignm E-value: | 1e-25 |
| Alignm gaps (pig, cow): | 112, 48 |
Show alignments to all cow chromosomes.