Cow genome map
| Conread name: | Pig3-SRG8022L11 |
| Conread position: | 156-324 |
| Cow position: | chr22:21145614-21145446 (view UCSC Genome Browser custom track) |
| Alignm length: | 173 |
| Alignm identity: | 127 |
| Alignm E-value: | 7e-22 |
| Alignm gaps (pig, cow): | 38, 14 |
| Conread position: | 169-295 |
| Cow position: | chr22:2100952-2100824 (view UCSC Genome Browser custom track) |
| Alignm length: | 130 |
| Alignm identity: | 100 |
| Alignm E-value: | 2e-21 |
| Alignm gaps (pig, cow): | 42, 89 |
| Conread position: | 169-351 |
| Cow position: | chr22:10323874-10324068 (view UCSC Genome Browser custom track) |
| Alignm length: | 196 |
| Alignm identity: | 151 |
| Alignm E-value: | 2e-31 |
| Alignm gaps (pig, cow): | 39, 89 |
| Conread position: | 170-356 |
| Cow position: | chr22:26188865-26189054 (view UCSC Genome Browser custom track) |
| Alignm length: | 194 |
| Alignm identity: | 138 |
| Alignm E-value: | 7e-21 |
| Alignm gaps (pig, cow): | 35, 88 |
| Conread position: | 172-295 |
| Cow position: | chr22:4060950-4060825 (view UCSC Genome Browser custom track) |
| Alignm length: | 127 |
| Alignm identity: | 99 |
| Alignm E-value: | 7e-22 |
| Alignm gaps (pig, cow): | 39, 83 |
| Conread position: | 172-307 |
| Cow position: | chr22:4163976-4164111 (view UCSC Genome Browser custom track) |
| Alignm length: | 139 |
| Alignm identity: | 110 |
| Alignm E-value: | 1e-24 |
| Alignm gaps (pig, cow): | 39, 24 |
| Conread position: | 172-323 |
| Cow position: | chr22:22606222-22606373 (view UCSC Genome Browser custom track) |
| Alignm length: | 155 |
| Alignm identity: | 125 |
| Alignm E-value: | 2e-31 |
| Alignm gaps (pig, cow): | 39, 86 |
| Conread position: | 172-349 |
| Cow position: | chr22:16044419-16044241 (view UCSC Genome Browser custom track) |
| Alignm length: | 182 |
| Alignm identity: | 129 |
| Alignm E-value: | 7e-21 |
| Alignm gaps (pig, cow): | 27, 83 |
| Conread position: | 172-350 |
| Cow position: | chr22:10285965-10286148 (view UCSC Genome Browser custom track) |
| Alignm length: | 187 |
| Alignm identity: | 137 |
| Alignm E-value: | 9e-24 |
| Alignm gaps (pig, cow): | 38, 81 |
| Conread position: | 172-381 |
| Cow position: | chr22:33485619-33485413 (view UCSC Genome Browser custom track) |
| Alignm length: | 212 |
| Alignm identity: | 144 |
| Alignm E-value: | 2e-21 |
| Alignm gaps (pig, cow): | 126, 82 |
| Conread position: | 172-410 |
| Cow position: | chr22:1659161-1659394 (view UCSC Genome Browser custom track) |
| Alignm length: | 245 |
| Alignm identity: | 170 |
| Alignm E-value: | 9e-24 |
| Alignm gaps (pig, cow): | 38, 86 |
| Conread position: | 172-456 |
| Cow position: | chr22:9372518-9372804 (view UCSC Genome Browser custom track) |
| Alignm length: | 294 |
| Alignm identity: | 192 |
| Alignm E-value: | 2e-21 |
| Alignm gaps (pig, cow): | 35, 84 |
| Conread position: | 173-412 |
| Cow position: | chr22:10533596-10533835 (view UCSC Genome Browser custom track) |
| Alignm length: | 246 |
| Alignm identity: | 167 |
| Alignm E-value: | 2e-22 |
| Alignm gaps (pig, cow): | 168, 26 |
| Conread position: | 173-446 |
| Cow position: | chr22:30253198-30253471 (view UCSC Genome Browser custom track) |
| Alignm length: | 282 |
| Alignm identity: | 190 |
| Alignm E-value: | 4e-26 |
| Alignm gaps (pig, cow): | 33, 85 |
| Conread position: | 174-286 |
| Cow position: | chr22:4012518-4012629 (view UCSC Genome Browser custom track) |
| Alignm length: | 113 |
| Alignm identity: | 91 |
| Alignm E-value: | 8e-23 |
| Alignm gaps (pig, cow): | 81, 0 |
| Conread position: | 174-286 |
| Cow position: | chr22:24134324-24134213 (view UCSC Genome Browser custom track) |
| Alignm length: | 113 |
| Alignm identity: | 94 |
| Alignm E-value: | 1e-25 |
| Alignm gaps (pig, cow): | 81, 0 |
| Conread position: | 174-288 |
| Cow position: | chr22:5616301-5616416 (view UCSC Genome Browser custom track) |
| Alignm length: | 118 |
| Alignm identity: | 96 |
| Alignm E-value: | 7e-22 |
| Alignm gaps (pig, cow): | 31, 82 |
| Conread position: | 174-289 |
| Cow position: | chr22:25742950-25742833 (view UCSC Genome Browser custom track) |
| Alignm length: | 119 |
| Alignm identity: | 96 |
| Alignm E-value: | 8e-23 |
| Alignm gaps (pig, cow): | 37, 84 |
| Conread position: | 174-293 |
| Cow position: | chr22:4017476-4017593 (view UCSC Genome Browser custom track) |
| Alignm length: | 120 |
| Alignm identity: | 100 |
| Alignm E-value: | 4e-27 |
| Alignm gaps (pig, cow): | 36, 0 |
| Conread position: | 174-295 |
| Cow position: | chr22:4119563-4119440 (view UCSC Genome Browser custom track) |
| Alignm length: | 125 |
| Alignm identity: | 97 |
| Alignm E-value: | 7e-21 |
| Alignm gaps (pig, cow): | 33, 84 |
| Conread position: | 174-296 |
| Cow position: | chr22:4563361-4563486 (view UCSC Genome Browser custom track) |
| Alignm length: | 127 |
| Alignm identity: | 100 |
| Alignm E-value: | 7e-22 |
| Alignm gaps (pig, cow): | 35, 85 |
| Conread position: | 174-296 |
| Cow position: | chr22:6721079-6720957 (view UCSC Genome Browser custom track) |
| Alignm length: | 124 |
| Alignm identity: | 96 |
| Alignm E-value: | 2e-21 |
| Alignm gaps (pig, cow): | 111, 82 |
| Conread position: | 174-296 |
| Cow position: | chr22:10532499-10532623 (view UCSC Genome Browser custom track) |
| Alignm length: | 126 |
| Alignm identity: | 102 |
| Alignm E-value: | 3e-25 |
| Alignm gaps (pig, cow): | 38, 84 |
| Conread position: | 174-296 |
| Cow position: | chr22:12902848-12902732 (view UCSC Genome Browser custom track) |
| Alignm length: | 123 |
| Alignm identity: | 98 |
| Alignm E-value: | 7e-22 |
| Alignm gaps (pig, cow): | 27, 0 |
| Conread position: | 174-296 |
| Cow position: | chr22:13957645-13957521 (view UCSC Genome Browser custom track) |
| Alignm length: | 126 |
| Alignm identity: | 99 |
| Alignm E-value: | 7e-22 |
| Alignm gaps (pig, cow): | 31, 84 |
| Conread position: | 174-296 |
| Cow position: | chr22:25387326-25387450 (view UCSC Genome Browser custom track) |
| Alignm length: | 127 |
| Alignm identity: | 100 |
| Alignm E-value: | 7e-21 |
| Alignm gaps (pig, cow): | 38, 82 |
| Conread position: | 174-296 |
| Cow position: | chr22:33985801-33985680 (view UCSC Genome Browser custom track) |
| Alignm length: | 123 |
| Alignm identity: | 98 |
| Alignm E-value: | 1e-24 |
| Alignm gaps (pig, cow): | 81, 0 |
| Conread position: | 174-303 |
| Cow position: | chr22:17852635-17852508 (view UCSC Genome Browser custom track) |
| Alignm length: | 131 |
| Alignm identity: | 104 |
| Alignm E-value: | 9e-24 |
| Alignm gaps (pig, cow): | 31, 82 |
| Conread position: | 174-304 |
| Cow position: | chr22:36432971-36432842 (view UCSC Genome Browser custom track) |
| Alignm length: | 131 |
| Alignm identity: | 104 |
| Alignm E-value: | 1e-26 |
| Alignm gaps (pig, cow): | 81, 0 |
| Conread position: | 174-305 |
| Cow position: | chr22:21295725-21295594 (view UCSC Genome Browser custom track) |
| Alignm length: | 134 |
| Alignm identity: | 106 |
| Alignm E-value: | 1e-24 |
| Alignm gaps (pig, cow): | 37, 84 |
| Conread position: | 174-316 |
| Cow position: | chr22:11189030-11189171 (view UCSC Genome Browser custom track) |
| Alignm length: | 145 |
| Alignm identity: | 109 |
| Alignm E-value: | 7e-22 |
| Alignm gaps (pig, cow): | 38, 114 |
| Conread position: | 174-324 |
| Cow position: | chr22:1977748-1977899 (view UCSC Genome Browser custom track) |
| Alignm length: | 155 |
| Alignm identity: | 118 |
| Alignm E-value: | 9e-24 |
| Alignm gaps (pig, cow): | 34, 84 |
| Conread position: | 174-325 |
| Cow position: | chr22:27431703-27431552 (view UCSC Genome Browser custom track) |
| Alignm length: | 157 |
| Alignm identity: | 120 |
| Alignm E-value: | 7e-22 |
| Alignm gaps (pig, cow): | 31, 21 |
| Conread position: | 174-340 |
| Cow position: | chr22:43119730-43119566 (view UCSC Genome Browser custom track) |
| Alignm length: | 170 |
| Alignm identity: | 124 |
| Alignm E-value: | 2e-21 |
| Alignm gaps (pig, cow): | 32, 85 |
| Conread position: | 174-349 |
| Cow position: | chr22:10339116-10338948 (view UCSC Genome Browser custom track) |
| Alignm length: | 176 |
| Alignm identity: | 129 |
| Alignm E-value: | 3e-24 |
| Alignm gaps (pig, cow): | 33, 0 |
| Conread position: | 174-351 |
| Cow position: | chr22:10315078-10315256 (view UCSC Genome Browser custom track) |
| Alignm length: | 182 |
| Alignm identity: | 135 |
| Alignm E-value: | 4e-26 |
| Alignm gaps (pig, cow): | 104, 81 |
| Conread position: | 174-351 |
| Cow position: | chr22:14245442-14245278 (view UCSC Genome Browser custom track) |
| Alignm length: | 178 |
| Alignm identity: | 132 |
| Alignm E-value: | 8e-23 |
| Alignm gaps (pig, cow): | 64, 0 |
| Conread position: | 174-351 |
| Cow position: | chr22:23440294-23440115 (view UCSC Genome Browser custom track) |
| Alignm length: | 184 |
| Alignm identity: | 135 |
| Alignm E-value: | 3e-23 |
| Alignm gaps (pig, cow): | 36, 14 |
| Conread position: | 174-351 |
| Cow position: | chr22:34104673-34104487 (view UCSC Genome Browser custom track) |
| Alignm length: | 190 |
| Alignm identity: | 143 |
| Alignm E-value: | 4e-26 |
| Alignm gaps (pig, cow): | 37, 84 |
| Conread position: | 174-364 |
| Cow position: | chr22:24066230-24066038 (view UCSC Genome Browser custom track) |
| Alignm length: | 195 |
| Alignm identity: | 138 |
| Alignm E-value: | 3e-24 |
| Alignm gaps (pig, cow): | 117, 50 |
| Conread position: | 174-390 |
| Cow position: | chr22:10295038-10295257 (view UCSC Genome Browser custom track) |
| Alignm length: | 225 |
| Alignm identity: | 157 |
| Alignm E-value: | 2e-22 |
| Alignm gaps (pig, cow): | 123, 51 |
| Conread position: | 174-403 |
| Cow position: | chr22:8710374-8710139 (view UCSC Genome Browser custom track) |
| Alignm length: | 244 |
| Alignm identity: | 177 |
| Alignm E-value: | 4e-27 |
| Alignm gaps (pig, cow): | 37, 82 |
| Conread position: | 174-403 |
| Cow position: | chr22:45684039-45683804 (view UCSC Genome Browser custom track) |
| Alignm length: | 240 |
| Alignm identity: | 167 |
| Alignm E-value: | 9e-24 |
| Alignm gaps (pig, cow): | 36, 11 |
| Conread position: | 174-405 |
| Cow position: | chr22:23036163-23036403 (view UCSC Genome Browser custom track) |
| Alignm length: | 242 |
| Alignm identity: | 172 |
| Alignm E-value: | 2e-30 |
| Alignm gaps (pig, cow): | 37, 84 |
| Conread position: | 174-411 |
| Cow position: | chr22:32892692-32892919 (view UCSC Genome Browser custom track) |
| Alignm length: | 242 |
| Alignm identity: | 170 |
| Alignm E-value: | 1e-25 |
| Alignm gaps (pig, cow): | 38, 86 |
| Conread position: | 175-275 |
| Cow position: | chr22:12686683-12686584 (view UCSC Genome Browser custom track) |
| Alignm length: | 101 |
| Alignm identity: | 83 |
| Alignm E-value: | 7e-21 |
| Alignm gaps (pig, cow): | 80, 0 |
| Conread position: | 175-287 |
| Cow position: | chr22:7584236-7584127 (view UCSC Genome Browser custom track) |
| Alignm length: | 113 |
| Alignm identity: | 91 |
| Alignm E-value: | 2e-21 |
| Alignm gaps (pig, cow): | 44, 0 |
| Conread position: | 175-294 |
| Cow position: | chr22:9171408-9171529 (view UCSC Genome Browser custom track) |
| Alignm length: | 123 |
| Alignm identity: | 98 |
| Alignm E-value: | 8e-23 |
| Alignm gaps (pig, cow): | 36, 83 |
| Conread position: | 175-305 |
| Cow position: | chr22:40048557-40048684 (view UCSC Genome Browser custom track) |
| Alignm length: | 131 |
| Alignm identity: | 101 |
| Alignm E-value: | 7e-22 |
| Alignm gaps (pig, cow): | 80, 0 |
| Conread position: | 175-349 |
| Cow position: | chr22:6494161-6494333 (view UCSC Genome Browser custom track) |
| Alignm length: | 178 |
| Alignm identity: | 128 |
| Alignm E-value: | 2e-22 |
| Alignm gaps (pig, cow): | 38, 79 |
| Conread position: | 175-351 |
| Cow position: | chr22:1563250-1563080 (view UCSC Genome Browser custom track) |
| Alignm length: | 177 |
| Alignm identity: | 128 |
| Alignm E-value: | 3e-23 |
| Alignm gaps (pig, cow): | 78, 0 |
| Conread position: | 175-351 |
| Cow position: | chr22:1871098-1871271 (view UCSC Genome Browser custom track) |
| Alignm length: | 180 |
| Alignm identity: | 134 |
| Alignm E-value: | 3e-25 |
| Alignm gaps (pig, cow): | 37, 84 |
| Conread position: | 175-351 |
| Cow position: | chr22:1983848-1984017 (view UCSC Genome Browser custom track) |
| Alignm length: | 180 |
| Alignm identity: | 134 |
| Alignm E-value: | 3e-24 |
| Alignm gaps (pig, cow): | 36, 83 |
| Conread position: | 175-351 |
| Cow position: | chr22:17152677-17152848 (view UCSC Genome Browser custom track) |
| Alignm length: | 180 |
| Alignm identity: | 134 |
| Alignm E-value: | 1e-24 |
| Alignm gaps (pig, cow): | 36, 83 |
| Conread position: | 175-414 |
| Cow position: | chr22:31510380-31510133 (view UCSC Genome Browser custom track) |
| Alignm length: | 251 |
| Alignm identity: | 182 |
| Alignm E-value: | 3e-33 |
| Alignm gaps (pig, cow): | 31, 85 |
| Conread position: | 175-456 |
| Cow position: | chr22:24071647-24071373 (view UCSC Genome Browser custom track) |
| Alignm length: | 284 |
| Alignm identity: | 191 |
| Alignm E-value: | 5e-28 |
| Alignm gaps (pig, cow): | 177, 80 |
| Conread position: | 175-457 |
| Cow position: | chr22:3250994-3250719 (view UCSC Genome Browser custom track) |
| Alignm length: | 287 |
| Alignm identity: | 201 |
| Alignm E-value: | 3e-33 |
| Alignm gaps (pig, cow): | 31, 83 |
| Conread position: | 175-488 |
| Cow position: | chr22:17764382-17764697 (view UCSC Genome Browser custom track) |
| Alignm length: | 322 |
| Alignm identity: | 210 |
| Alignm E-value: | 1e-25 |
| Alignm gaps (pig, cow): | 142, 79 |
| Conread position: | 177-296 |
| Cow position: | chr22:15950381-15950263 (view UCSC Genome Browser custom track) |
| Alignm length: | 120 |
| Alignm identity: | 95 |
| Alignm E-value: | 3e-23 |
| Alignm gaps (pig, cow): | 78, 0 |
| Conread position: | 177-421 |
| Cow position: | chr22:24063097-24063333 (view UCSC Genome Browser custom track) |
| Alignm length: | 247 |
| Alignm identity: | 180 |
| Alignm E-value: | 3e-35 |
| Alignm gaps (pig, cow): | 161, 78 |
| Conread position: | 178-295 |
| Cow position: | chr22:7518558-7518677 (view UCSC Genome Browser custom track) |
| Alignm length: | 121 |
| Alignm identity: | 97 |
| Alignm E-value: | 8e-23 |
| Alignm gaps (pig, cow): | 33, 80 |
| Conread position: | 181-437 |
| Cow position: | chr22:31308890-31309134 (view UCSC Genome Browser custom track) |
| Alignm length: | 261 |
| Alignm identity: | 180 |
| Alignm E-value: | 9e-24 |
| Alignm gaps (pig, cow): | 29, 75 |
| Conread position: | 184-349 |
| Cow position: | chr22:22266317-22266480 (view UCSC Genome Browser custom track) |
| Alignm length: | 169 |
| Alignm identity: | 124 |
| Alignm E-value: | 7e-22 |
| Alignm gaps (pig, cow): | 27, 74 |
| Conread position: | 190-370 |
| Cow position: | chr22:2623507-2623325 (view UCSC Genome Browser custom track) |
| Alignm length: | 188 |
| Alignm identity: | 140 |
| Alignm E-value: | 3e-25 |
| Alignm gaps (pig, cow): | 21, 80 |
| Conread position: | 204-471 |
| Cow position: | chr22:3257630-3257375 (view UCSC Genome Browser custom track) |
| Alignm length: | 268 |
| Alignm identity: | 180 |
| Alignm E-value: | 1e-25 |
| Alignm gaps (pig, cow): | 51, 0 |
| Conread position: | 213-454 |
| Cow position: | chr22:23695349-23695100 (view UCSC Genome Browser custom track) |
| Alignm length: | 251 |
| Alignm identity: | 165 |
| Alignm E-value: | 7e-21 |
| Alignm gaps (pig, cow): | 94, 42 |
Show alignments to all cow chromosomes.