Cow genome map
| Conread name: | Pig3-SRG8022L11 |
| Conread position: | 171-383 |
| Cow position: | chr23:23114059-23114281 (view UCSC Genome Browser custom track) |
| Alignm length: | 224 |
| Alignm identity: | 158 |
| Alignm E-value: | 3e-24 |
| Alignm gaps (pig, cow): | 14, 86 |
| Conread position: | 172-295 |
| Cow position: | chr23:1194489-1194364 (view UCSC Genome Browser custom track) |
| Alignm length: | 127 |
| Alignm identity: | 99 |
| Alignm E-value: | 6e-22 |
| Alignm gaps (pig, cow): | 39, 86 |
| Conread position: | 172-295 |
| Cow position: | chr23:39330290-39330164 (view UCSC Genome Browser custom track) |
| Alignm length: | 127 |
| Alignm identity: | 97 |
| Alignm E-value: | 6e-21 |
| Alignm gaps (pig, cow): | 38, 0 |
| Conread position: | 172-349 |
| Cow position: | chr23:13674029-13673849 (view UCSC Genome Browser custom track) |
| Alignm length: | 183 |
| Alignm identity: | 133 |
| Alignm E-value: | 9e-25 |
| Alignm gaps (pig, cow): | 35, 86 |
| Conread position: | 172-349 |
| Cow position: | chr23:21336481-21336305 (view UCSC Genome Browser custom track) |
| Alignm length: | 182 |
| Alignm identity: | 131 |
| Alignm E-value: | 6e-21 |
| Alignm gaps (pig, cow): | 33, 79 |
| Conread position: | 172-497 |
| Cow position: | chr23:4336072-4336391 (view UCSC Genome Browser custom track) |
| Alignm length: | 328 |
| Alignm identity: | 207 |
| Alignm E-value: | 2e-23 |
| Alignm gaps (pig, cow): | 126, 81 |
| Conread position: | 174-287 |
| Cow position: | chr23:29459094-29458979 (view UCSC Genome Browser custom track) |
| Alignm length: | 117 |
| Alignm identity: | 94 |
| Alignm E-value: | 6e-22 |
| Alignm gaps (pig, cow): | 37, 82 |
| Conread position: | 174-289 |
| Cow position: | chr23:348943-348826 (view UCSC Genome Browser custom track) |
| Alignm length: | 119 |
| Alignm identity: | 95 |
| Alignm E-value: | 6e-22 |
| Alignm gaps (pig, cow): | 37, 84 |
| Conread position: | 174-292 |
| Cow position: | chr23:18902047-18901930 (view UCSC Genome Browser custom track) |
| Alignm length: | 119 |
| Alignm identity: | 95 |
| Alignm E-value: | 8e-24 |
| Alignm gaps (pig, cow): | 81, 0 |
| Conread position: | 174-294 |
| Cow position: | chr23:23197351-23197470 (view UCSC Genome Browser custom track) |
| Alignm length: | 121 |
| Alignm identity: | 95 |
| Alignm E-value: | 7e-23 |
| Alignm gaps (pig, cow): | 80, 0 |
| Conread position: | 174-295 |
| Cow position: | chr23:5881513-5881390 (view UCSC Genome Browser custom track) |
| Alignm length: | 125 |
| Alignm identity: | 97 |
| Alignm E-value: | 6e-21 |
| Alignm gaps (pig, cow): | 37, 84 |
| Conread position: | 174-295 |
| Cow position: | chr23:8917667-8917551 (view UCSC Genome Browser custom track) |
| Alignm length: | 122 |
| Alignm identity: | 96 |
| Alignm E-value: | 6e-21 |
| Alignm gaps (pig, cow): | 66, 0 |
| Conread position: | 174-296 |
| Cow position: | chr23:1981654-1981534 (view UCSC Genome Browser custom track) |
| Alignm length: | 123 |
| Alignm identity: | 98 |
| Alignm E-value: | 8e-24 |
| Alignm gaps (pig, cow): | 81, 0 |
| Conread position: | 174-296 |
| Cow position: | chr23:5706998-5707122 (view UCSC Genome Browser custom track) |
| Alignm length: | 126 |
| Alignm identity: | 99 |
| Alignm E-value: | 2e-22 |
| Alignm gaps (pig, cow): | 37, 84 |
| Conread position: | 174-296 |
| Cow position: | chr23:11045492-11045614 (view UCSC Genome Browser custom track) |
| Alignm length: | 125 |
| Alignm identity: | 98 |
| Alignm E-value: | 6e-21 |
| Alignm gaps (pig, cow): | 56, 83 |
| Conread position: | 174-296 |
| Cow position: | chr23:27849001-27849126 (view UCSC Genome Browser custom track) |
| Alignm length: | 127 |
| Alignm identity: | 101 |
| Alignm E-value: | 7e-23 |
| Alignm gaps (pig, cow): | 37, 84 |
| Conread position: | 174-296 |
| Cow position: | chr23:36022780-36022660 (view UCSC Genome Browser custom track) |
| Alignm length: | 123 |
| Alignm identity: | 98 |
| Alignm E-value: | 8e-24 |
| Alignm gaps (pig, cow): | 33, 0 |
| Conread position: | 174-297 |
| Cow position: | chr23:20002262-20002385 (view UCSC Genome Browser custom track) |
| Alignm length: | 125 |
| Alignm identity: | 96 |
| Alignm E-value: | 6e-21 |
| Alignm gaps (pig, cow): | 113, 79 |
| Conread position: | 174-306 |
| Cow position: | chr23:2282174-2282043 (view UCSC Genome Browser custom track) |
| Alignm length: | 134 |
| Alignm identity: | 104 |
| Alignm E-value: | 2e-23 |
| Alignm gaps (pig, cow): | 126, 81 |
| Conread position: | 174-310 |
| Cow position: | chr23:8698425-8698561 (view UCSC Genome Browser custom track) |
| Alignm length: | 140 |
| Alignm identity: | 113 |
| Alignm E-value: | 1e-26 |
| Alignm gaps (pig, cow): | 31, 83 |
| Conread position: | 174-324 |
| Cow position: | chr23:33717536-33717387 (view UCSC Genome Browser custom track) |
| Alignm length: | 154 |
| Alignm identity: | 115 |
| Alignm E-value: | 6e-21 |
| Alignm gaps (pig, cow): | 36, 83 |
| Conread position: | 174-325 |
| Cow position: | chr23:21439994-21439846 (view UCSC Genome Browser custom track) |
| Alignm length: | 153 |
| Alignm identity: | 118 |
| Alignm E-value: | 1e-25 |
| Alignm gaps (pig, cow): | 111, 82 |
| Conread position: | 174-351 |
| Cow position: | chr23:1760841-1760667 (view UCSC Genome Browser custom track) |
| Alignm length: | 181 |
| Alignm identity: | 136 |
| Alignm E-value: | 1e-26 |
| Alignm gaps (pig, cow): | 31, 84 |
| Conread position: | 174-351 |
| Cow position: | chr23:3282117-3281944 (view UCSC Genome Browser custom track) |
| Alignm length: | 181 |
| Alignm identity: | 136 |
| Alignm E-value: | 1e-26 |
| Alignm gaps (pig, cow): | 36, 84 |
| Conread position: | 174-351 |
| Cow position: | chr23:22105566-22105747 (view UCSC Genome Browser custom track) |
| Alignm length: | 184 |
| Alignm identity: | 133 |
| Alignm E-value: | 7e-23 |
| Alignm gaps (pig, cow): | 39, 47 |
| Conread position: | 174-353 |
| Cow position: | chr23:1290302-1290474 (view UCSC Genome Browser custom track) |
| Alignm length: | 183 |
| Alignm identity: | 134 |
| Alignm E-value: | 2e-21 |
| Alignm gaps (pig, cow): | 37, 84 |
| Conread position: | 174-374 |
| Cow position: | chr23:40995178-40995380 (view UCSC Genome Browser custom track) |
| Alignm length: | 205 |
| Alignm identity: | 141 |
| Alignm E-value: | 6e-22 |
| Alignm gaps (pig, cow): | 122, 79 |
| Conread position: | 174-398 |
| Cow position: | chr23:22238817-22238606 (view UCSC Genome Browser custom track) |
| Alignm length: | 229 |
| Alignm identity: | 166 |
| Alignm E-value: | 1e-25 |
| Alignm gaps (pig, cow): | 39, 84 |
| Conread position: | 174-403 |
| Cow position: | chr23:20744588-20744364 (view UCSC Genome Browser custom track) |
| Alignm length: | 235 |
| Alignm identity: | 173 |
| Alignm E-value: | 2e-31 |
| Alignm gaps (pig, cow): | 37, 84 |
| Conread position: | 174-408 |
| Cow position: | chr23:26986266-26986042 (view UCSC Genome Browser custom track) |
| Alignm length: | 240 |
| Alignm identity: | 172 |
| Alignm E-value: | 3e-26 |
| Alignm gaps (pig, cow): | 32, 52 |
| Conread position: | 174-411 |
| Cow position: | chr23:11315030-11314795 (view UCSC Genome Browser custom track) |
| Alignm length: | 242 |
| Alignm identity: | 161 |
| Alignm E-value: | 6e-21 |
| Alignm gaps (pig, cow): | 37, 129 |
| Conread position: | 174-422 |
| Cow position: | chr23:6244591-6244344 (view UCSC Genome Browser custom track) |
| Alignm length: | 253 |
| Alignm identity: | 167 |
| Alignm E-value: | 6e-22 |
| Alignm gaps (pig, cow): | 32, 83 |
| Conread position: | 174-423 |
| Cow position: | chr23:25990432-25990185 (view UCSC Genome Browser custom track) |
| Alignm length: | 256 |
| Alignm identity: | 176 |
| Alignm E-value: | 9e-25 |
| Alignm gaps (pig, cow): | 34, 46 |
| Conread position: | 175-287 |
| Cow position: | chr23:33160692-33160581 (view UCSC Genome Browser custom track) |
| Alignm length: | 113 |
| Alignm identity: | 93 |
| Alignm E-value: | 9e-25 |
| Alignm gaps (pig, cow): | 80, 0 |
| Conread position: | 175-296 |
| Cow position: | chr23:5785850-5785973 (view UCSC Genome Browser custom track) |
| Alignm length: | 125 |
| Alignm identity: | 98 |
| Alignm E-value: | 6e-22 |
| Alignm gaps (pig, cow): | 36, 83 |
| Conread position: | 175-296 |
| Cow position: | chr23:17231155-17231277 (view UCSC Genome Browser custom track) |
| Alignm length: | 125 |
| Alignm identity: | 99 |
| Alignm E-value: | 2e-21 |
| Alignm gaps (pig, cow): | 35, 82 |
| Conread position: | 176-295 |
| Cow position: | chr23:39778408-39778529 (view UCSC Genome Browser custom track) |
| Alignm length: | 123 |
| Alignm identity: | 96 |
| Alignm E-value: | 6e-21 |
| Alignm gaps (pig, cow): | 34, 83 |
| Conread position: | 176-296 |
| Cow position: | chr23:24718795-24718673 (view UCSC Genome Browser custom track) |
| Alignm length: | 124 |
| Alignm identity: | 101 |
| Alignm E-value: | 3e-25 |
| Alignm gaps (pig, cow): | 34, 82 |
| Conread position: | 177-294 |
| Cow position: | chr23:2160625-2160513 (view UCSC Genome Browser custom track) |
| Alignm length: | 118 |
| Alignm identity: | 94 |
| Alignm E-value: | 6e-21 |
| Alignm gaps (pig, cow): | 24, 0 |
| Conread position: | 180-296 |
| Cow position: | chr23:534238-534356 (view UCSC Genome Browser custom track) |
| Alignm length: | 120 |
| Alignm identity: | 95 |
| Alignm E-value: | 2e-21 |
| Alignm gaps (pig, cow): | 31, 78 |
| Conread position: | 181-351 |
| Cow position: | chr23:18354661-18354841 (view UCSC Genome Browser custom track) |
| Alignm length: | 183 |
| Alignm identity: | 135 |
| Alignm E-value: | 2e-22 |
| Alignm gaps (pig, cow): | 25, 72 |
| Conread position: | 182-283 |
| Cow position: | chr23:1653016-1653117 (view UCSC Genome Browser custom track) |
| Alignm length: | 102 |
| Alignm identity: | 83 |
| Alignm E-value: | 2e-21 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 205-416 |
| Cow position: | chr23:35199379-35199589 (view UCSC Genome Browser custom track) |
| Alignm length: | 214 |
| Alignm identity: | 119 |
| Alignm E-value: | 2e-21 |
| Alignm gaps (pig, cow): | 101, 46 |
Show alignments to all cow chromosomes.