Cow genome map
| Conread name: | Pig3-SRG8022L11 |
| Conread position: | 167-312 |
| Cow position: | chr27:17918756-17918902 (view UCSC Genome Browser custom track) |
| Alignm length: | 149 |
| Alignm identity: | 113 |
| Alignm E-value: | 5e-23 |
| Alignm gaps (pig, cow): | 34, 89 |
| Conread position: | 172-293 |
| Cow position: | chr27:299425-299547 (view UCSC Genome Browser custom track) |
| Alignm length: | 124 |
| Alignm identity: | 100 |
| Alignm E-value: | 2e-24 |
| Alignm gaps (pig, cow): | 38, 83 |
| Conread position: | 172-304 |
| Cow position: | chr27:23594277-23594145 (view UCSC Genome Browser custom track) |
| Alignm length: | 136 |
| Alignm identity: | 109 |
| Alignm E-value: | 2e-25 |
| Alignm gaps (pig, cow): | 39, 49 |
| Conread position: | 172-370 |
| Cow position: | chr27:12710205-12710014 (view UCSC Genome Browser custom track) |
| Alignm length: | 204 |
| Alignm identity: | 148 |
| Alignm E-value: | 2e-22 |
| Alignm gaps (pig, cow): | 34, 84 |
| Conread position: | 174-295 |
| Cow position: | chr27:17397500-17397623 (view UCSC Genome Browser custom track) |
| Alignm length: | 125 |
| Alignm identity: | 100 |
| Alignm E-value: | 6e-24 |
| Alignm gaps (pig, cow): | 37, 85 |
| Conread position: | 174-295 |
| Cow position: | chr27:24305388-24305269 (view UCSC Genome Browser custom track) |
| Alignm length: | 122 |
| Alignm identity: | 98 |
| Alignm E-value: | 2e-24 |
| Alignm gaps (pig, cow): | 45, 0 |
| Conread position: | 174-296 |
| Cow position: | chr27:426923-426799 (view UCSC Genome Browser custom track) |
| Alignm length: | 126 |
| Alignm identity: | 98 |
| Alignm E-value: | 4e-21 |
| Alignm gaps (pig, cow): | 33, 83 |
| Conread position: | 174-296 |
| Cow position: | chr27:6106654-6106533 (view UCSC Genome Browser custom track) |
| Alignm length: | 124 |
| Alignm identity: | 101 |
| Alignm E-value: | 2e-25 |
| Alignm gaps (pig, cow): | 107, 33 |
| Conread position: | 174-296 |
| Cow position: | chr27:13204413-13204290 (view UCSC Genome Browser custom track) |
| Alignm length: | 125 |
| Alignm identity: | 97 |
| Alignm E-value: | 1e-21 |
| Alignm gaps (pig, cow): | 37, 81 |
| Conread position: | 174-296 |
| Cow position: | chr27:22171251-22171130 (view UCSC Genome Browser custom track) |
| Alignm length: | 123 |
| Alignm identity: | 104 |
| Alignm E-value: | 1e-30 |
| Alignm gaps (pig, cow): | 81, 0 |
| Conread position: | 174-304 |
| Cow position: | chr27:16103761-16103635 (view UCSC Genome Browser custom track) |
| Alignm length: | 131 |
| Alignm identity: | 108 |
| Alignm E-value: | 9e-28 |
| Alignm gaps (pig, cow): | 40, 0 |
| Conread position: | 174-310 |
| Cow position: | chr27:19508967-19508831 (view UCSC Genome Browser custom track) |
| Alignm length: | 140 |
| Alignm identity: | 111 |
| Alignm E-value: | 2e-25 |
| Alignm gaps (pig, cow): | 37, 84 |
| Conread position: | 174-350 |
| Cow position: | chr27:590808-590975 (view UCSC Genome Browser custom track) |
| Alignm length: | 180 |
| Alignm identity: | 134 |
| Alignm E-value: | 2e-22 |
| Alignm gaps (pig, cow): | 16, 82 |
| Conread position: | 174-350 |
| Cow position: | chr27:19717869-19717692 (view UCSC Genome Browser custom track) |
| Alignm length: | 181 |
| Alignm identity: | 137 |
| Alignm E-value: | 1e-29 |
| Alignm gaps (pig, cow): | 37, 84 |
| Conread position: | 174-351 |
| Cow position: | chr27:788843-789017 (view UCSC Genome Browser custom track) |
| Alignm length: | 182 |
| Alignm identity: | 136 |
| Alignm E-value: | 2e-25 |
| Alignm gaps (pig, cow): | 34, 84 |
| Conread position: | 174-351 |
| Cow position: | chr27:6674233-6674061 (view UCSC Genome Browser custom track) |
| Alignm length: | 179 |
| Alignm identity: | 136 |
| Alignm E-value: | 1e-29 |
| Alignm gaps (pig, cow): | 37, 83 |
| Conread position: | 174-351 |
| Cow position: | chr27:7212759-7212937 (view UCSC Genome Browser custom track) |
| Alignm length: | 183 |
| Alignm identity: | 133 |
| Alignm E-value: | 5e-23 |
| Alignm gaps (pig, cow): | 37, 84 |
| Conread position: | 174-354 |
| Cow position: | chr27:30489456-30489637 (view UCSC Genome Browser custom track) |
| Alignm length: | 185 |
| Alignm identity: | 145 |
| Alignm E-value: | 2e-35 |
| Alignm gaps (pig, cow): | 37, 82 |
| Conread position: | 174-357 |
| Cow position: | chr27:26643639-26643462 (view UCSC Genome Browser custom track) |
| Alignm length: | 185 |
| Alignm identity: | 135 |
| Alignm E-value: | 7e-25 |
| Alignm gaps (pig, cow): | 168, 56 |
| Conread position: | 174-361 |
| Cow position: | chr27:20758084-20758268 (view UCSC Genome Browser custom track) |
| Alignm length: | 193 |
| Alignm identity: | 144 |
| Alignm E-value: | 7e-25 |
| Alignm gaps (pig, cow): | 104, 45 |
| Conread position: | 174-369 |
| Cow position: | chr27:20795744-20795544 (view UCSC Genome Browser custom track) |
| Alignm length: | 203 |
| Alignm identity: | 149 |
| Alignm E-value: | 1e-28 |
| Alignm gaps (pig, cow): | 124, 81 |
| Conread position: | 174-374 |
| Cow position: | chr27:23485163-23484958 (view UCSC Genome Browser custom track) |
| Alignm length: | 208 |
| Alignm identity: | 145 |
| Alignm E-value: | 2e-22 |
| Alignm gaps (pig, cow): | 126, 81 |
| Conread position: | 174-375 |
| Cow position: | chr27:19576369-19576571 (view UCSC Genome Browser custom track) |
| Alignm length: | 207 |
| Alignm identity: | 143 |
| Alignm E-value: | 4e-21 |
| Alignm gaps (pig, cow): | 33, 84 |
| Conread position: | 174-379 |
| Cow position: | chr27:22179815-22180018 (view UCSC Genome Browser custom track) |
| Alignm length: | 208 |
| Alignm identity: | 149 |
| Alignm E-value: | 3e-28 |
| Alignm gaps (pig, cow): | 143, 81 |
| Conread position: | 174-412 |
| Cow position: | chr27:4720161-4720397 (view UCSC Genome Browser custom track) |
| Alignm length: | 241 |
| Alignm identity: | 170 |
| Alignm E-value: | 2e-32 |
| Alignm gaps (pig, cow): | 119, 81 |
| Conread position: | 174-430 |
| Cow position: | chr27:20486012-20485756 (view UCSC Genome Browser custom track) |
| Alignm length: | 265 |
| Alignm identity: | 188 |
| Alignm E-value: | 4e-31 |
| Alignm gaps (pig, cow): | 11, 69 |
| Conread position: | 174-452 |
| Cow position: | chr27:10581483-10581214 (view UCSC Genome Browser custom track) |
| Alignm length: | 279 |
| Alignm identity: | 180 |
| Alignm E-value: | 1e-21 |
| Alignm gaps (pig, cow): | 25, 0 |
| Conread position: | 175-295 |
| Cow position: | chr27:12459237-12459118 (view UCSC Genome Browser custom track) |
| Alignm length: | 123 |
| Alignm identity: | 98 |
| Alignm E-value: | 5e-22 |
| Alignm gaps (pig, cow): | 113, 20 |
| Conread position: | 175-298 |
| Cow position: | chr27:15454161-15454039 (view UCSC Genome Browser custom track) |
| Alignm length: | 124 |
| Alignm identity: | 98 |
| Alignm E-value: | 2e-24 |
| Alignm gaps (pig, cow): | 80, 0 |
| Conread position: | 175-384 |
| Cow position: | chr27:15378526-15378725 (view UCSC Genome Browser custom track) |
| Alignm length: | 211 |
| Alignm identity: | 153 |
| Alignm E-value: | 7e-26 |
| Alignm gaps (pig, cow): | 180, 32 |
| Conread position: | 175-403 |
| Cow position: | chr27:26323401-26323187 (view UCSC Genome Browser custom track) |
| Alignm length: | 232 |
| Alignm identity: | 164 |
| Alignm E-value: | 2e-22 |
| Alignm gaps (pig, cow): | 37, 5 |
| Conread position: | 177-351 |
| Cow position: | chr27:16589751-16589930 (view UCSC Genome Browser custom track) |
| Alignm length: | 181 |
| Alignm identity: | 135 |
| Alignm E-value: | 9e-28 |
| Alignm gaps (pig, cow): | 34, 80 |
| Conread position: | 177-400 |
| Cow position: | chr27:20517609-20517393 (view UCSC Genome Browser custom track) |
| Alignm length: | 231 |
| Alignm identity: | 167 |
| Alignm E-value: | 2e-25 |
| Alignm gaps (pig, cow): | 34, 75 |
| Conread position: | 178-331 |
| Cow position: | chr27:7448111-7448264 (view UCSC Genome Browser custom track) |
| Alignm length: | 158 |
| Alignm identity: | 123 |
| Alignm E-value: | 2e-26 |
| Alignm gaps (pig, cow): | 29, 80 |
| Conread position: | 180-421 |
| Cow position: | chr27:28541164-28541416 (view UCSC Genome Browser custom track) |
| Alignm length: | 256 |
| Alignm identity: | 178 |
| Alignm E-value: | 7e-26 |
| Alignm gaps (pig, cow): | 30, 76 |
| Conread position: | 202-408 |
| Cow position: | chr27:6550387-6550193 (view UCSC Genome Browser custom track) |
| Alignm length: | 207 |
| Alignm identity: | 144 |
| Alignm E-value: | 1e-21 |
| Alignm gaps (pig, cow): | 51, 0 |
| Conread position: | 205-409 |
| Cow position: | chr27:16088724-16088529 (view UCSC Genome Browser custom track) |
| Alignm length: | 205 |
| Alignm identity: | 146 |
| Alignm E-value: | 7e-25 |
| Alignm gaps (pig, cow): | 48, 0 |
Show alignments to all cow chromosomes.