Cow genome map
| Conread name: | Pig3-SRG8022L11 |
| Conread position: | 172-296 |
| Cow position: | chr28:7350659-7350785 (view UCSC Genome Browser custom track) |
| Alignm length: | 128 |
| Alignm identity: | 106 |
| Alignm E-value: | 3e-28 |
| Alignm gaps (pig, cow): | 39, 87 |
| Conread position: | 172-304 |
| Cow position: | chr28:777680-777813 (view UCSC Genome Browser custom track) |
| Alignm length: | 136 |
| Alignm identity: | 105 |
| Alignm E-value: | 2e-22 |
| Alignm gaps (pig, cow): | 38, 119 |
| Conread position: | 172-314 |
| Cow position: | chr28:7498142-7497998 (view UCSC Genome Browser custom track) |
| Alignm length: | 147 |
| Alignm identity: | 114 |
| Alignm E-value: | 7e-25 |
| Alignm gaps (pig, cow): | 37, 86 |
| Conread position: | 172-379 |
| Cow position: | chr28:32179702-32179912 (view UCSC Genome Browser custom track) |
| Alignm length: | 216 |
| Alignm identity: | 150 |
| Alignm E-value: | 5e-21 |
| Alignm gaps (pig, cow): | 152, 35 |
| Conread position: | 174-286 |
| Cow position: | chr28:3147489-3147599 (view UCSC Genome Browser custom track) |
| Alignm length: | 113 |
| Alignm identity: | 93 |
| Alignm E-value: | 7e-24 |
| Alignm gaps (pig, cow): | 79, 0 |
| Conread position: | 174-289 |
| Cow position: | chr28:7132080-7131964 (view UCSC Genome Browser custom track) |
| Alignm length: | 118 |
| Alignm identity: | 98 |
| Alignm E-value: | 8e-26 |
| Alignm gaps (pig, cow): | 47, 83 |
| Conread position: | 174-289 |
| Cow position: | chr28:25596638-25596750 (view UCSC Genome Browser custom track) |
| Alignm length: | 116 |
| Alignm identity: | 93 |
| Alignm E-value: | 5e-22 |
| Alignm gaps (pig, cow): | 80, 0 |
| Conread position: | 174-296 |
| Cow position: | chr28:5204202-5204326 (view UCSC Genome Browser custom track) |
| Alignm length: | 126 |
| Alignm identity: | 103 |
| Alignm E-value: | 3e-26 |
| Alignm gaps (pig, cow): | 37, 84 |
| Conread position: | 174-296 |
| Cow position: | chr28:7619143-7619019 (view UCSC Genome Browser custom track) |
| Alignm length: | 126 |
| Alignm identity: | 98 |
| Alignm E-value: | 2e-21 |
| Alignm gaps (pig, cow): | 35, 82 |
| Conread position: | 174-296 |
| Cow position: | chr28:9636450-9636326 (view UCSC Genome Browser custom track) |
| Alignm length: | 126 |
| Alignm identity: | 98 |
| Alignm E-value: | 2e-21 |
| Alignm gaps (pig, cow): | 37, 84 |
| Conread position: | 174-296 |
| Cow position: | chr28:16879580-16879704 (view UCSC Genome Browser custom track) |
| Alignm length: | 126 |
| Alignm identity: | 102 |
| Alignm E-value: | 2e-25 |
| Alignm gaps (pig, cow): | 37, 84 |
| Conread position: | 174-296 |
| Cow position: | chr28:29850808-29850684 (view UCSC Genome Browser custom track) |
| Alignm length: | 126 |
| Alignm identity: | 100 |
| Alignm E-value: | 2e-23 |
| Alignm gaps (pig, cow): | 37, 84 |
| Conread position: | 174-296 |
| Cow position: | chr28:30902133-30902257 (view UCSC Genome Browser custom track) |
| Alignm length: | 126 |
| Alignm identity: | 102 |
| Alignm E-value: | 2e-25 |
| Alignm gaps (pig, cow): | 36, 84 |
| Conread position: | 174-303 |
| Cow position: | chr28:5805678-5805804 (view UCSC Genome Browser custom track) |
| Alignm length: | 130 |
| Alignm identity: | 100 |
| Alignm E-value: | 2e-21 |
| Alignm gaps (pig, cow): | 33, 0 |
| Conread position: | 174-304 |
| Cow position: | chr28:17739832-17739962 (view UCSC Genome Browser custom track) |
| Alignm length: | 133 |
| Alignm identity: | 102 |
| Alignm E-value: | 5e-21 |
| Alignm gaps (pig, cow): | 22, 28 |
| Conread position: | 174-314 |
| Cow position: | chr28:2131917-2131775 (view UCSC Genome Browser custom track) |
| Alignm length: | 145 |
| Alignm identity: | 113 |
| Alignm E-value: | 7e-25 |
| Alignm gaps (pig, cow): | 38, 84 |
| Conread position: | 174-342 |
| Cow position: | chr28:6971341-6971172 (view UCSC Genome Browser custom track) |
| Alignm length: | 173 |
| Alignm identity: | 132 |
| Alignm E-value: | 1e-28 |
| Alignm gaps (pig, cow): | 32, 84 |
| Conread position: | 174-350 |
| Cow position: | chr28:28501240-28501408 (view UCSC Genome Browser custom track) |
| Alignm length: | 178 |
| Alignm identity: | 129 |
| Alignm E-value: | 5e-21 |
| Alignm gaps (pig, cow): | 34, 82 |
| Conread position: | 174-351 |
| Cow position: | chr28:12964577-12964750 (view UCSC Genome Browser custom track) |
| Alignm length: | 178 |
| Alignm identity: | 125 |
| Alignm E-value: | 2e-21 |
| Alignm gaps (pig, cow): | 81, 0 |
| Conread position: | 174-398 |
| Cow position: | chr28:2960824-2960597 (view UCSC Genome Browser custom track) |
| Alignm length: | 233 |
| Alignm identity: | 165 |
| Alignm E-value: | 8e-26 |
| Alignm gaps (pig, cow): | 15, 85 |
| Conread position: | 174-408 |
| Cow position: | chr28:8396342-8396572 (view UCSC Genome Browser custom track) |
| Alignm length: | 241 |
| Alignm identity: | 166 |
| Alignm E-value: | 5e-22 |
| Alignm gaps (pig, cow): | 37, 84 |
| Conread position: | 174-409 |
| Cow position: | chr28:4051205-4051458 (view UCSC Genome Browser custom track) |
| Alignm length: | 256 |
| Alignm identity: | 180 |
| Alignm E-value: | 7e-24 |
| Alignm gaps (pig, cow): | 36, 84 |
| Conread position: | 174-411 |
| Cow position: | chr28:24082277-24082516 (view UCSC Genome Browser custom track) |
| Alignm length: | 245 |
| Alignm identity: | 169 |
| Alignm E-value: | 8e-26 |
| Alignm gaps (pig, cow): | 37, 84 |
| Conread position: | 174-413 |
| Cow position: | chr28:4016538-4016783 (view UCSC Genome Browser custom track) |
| Alignm length: | 248 |
| Alignm identity: | 164 |
| Alignm E-value: | 5e-21 |
| Alignm gaps (pig, cow): | 37, 82 |
| Conread position: | 174-482 |
| Cow position: | chr28:9705660-9705968 (view UCSC Genome Browser custom track) |
| Alignm length: | 313 |
| Alignm identity: | 199 |
| Alignm E-value: | 2e-24 |
| Alignm gaps (pig, cow): | 119, 81 |
| Conread position: | 175-304 |
| Cow position: | chr28:4364814-4364688 (view UCSC Genome Browser custom track) |
| Alignm length: | 130 |
| Alignm identity: | 100 |
| Alignm E-value: | 2e-21 |
| Alignm gaps (pig, cow): | 80, 0 |
| Conread position: | 175-374 |
| Cow position: | chr28:4013092-4013291 (view UCSC Genome Browser custom track) |
| Alignm length: | 206 |
| Alignm identity: | 148 |
| Alignm E-value: | 6e-23 |
| Alignm gaps (pig, cow): | 30, 83 |
| Conread position: | 182-304 |
| Cow position: | chr28:11828944-11828822 (view UCSC Genome Browser custom track) |
| Alignm length: | 124 |
| Alignm identity: | 100 |
| Alignm E-value: | 2e-25 |
| Alignm gaps (pig, cow): | 116, 73 |
| Conread position: | 185-296 |
| Cow position: | chr28:12991160-12991273 (view UCSC Genome Browser custom track) |
| Alignm length: | 115 |
| Alignm identity: | 94 |
| Alignm E-value: | 6e-23 |
| Alignm gaps (pig, cow): | 21, 73 |
| Conread position: | 185-351 |
| Cow position: | chr28:7532566-7532403 (view UCSC Genome Browser custom track) |
| Alignm length: | 168 |
| Alignm identity: | 124 |
| Alignm E-value: | 2e-24 |
| Alignm gaps (pig, cow): | 132, 70 |
| Conread position: | 198-363 |
| Cow position: | chr28:3264077-3264240 (view UCSC Genome Browser custom track) |
| Alignm length: | 168 |
| Alignm identity: | 132 |
| Alignm E-value: | 5e-31 |
| Alignm gaps (pig, cow): | 103, 57 |
| Conread position: | 199-351 |
| Cow position: | chr28:23641231-23641071 (view UCSC Genome Browser custom track) |
| Alignm length: | 162 |
| Alignm identity: | 122 |
| Alignm E-value: | 5e-22 |
| Alignm gaps (pig, cow): | 7, 57 |
| Conread position: | 205-349 |
| Cow position: | chr28:29434387-29434241 (view UCSC Genome Browser custom track) |
| Alignm length: | 150 |
| Alignm identity: | 115 |
| Alignm E-value: | 5e-22 |
| Alignm gaps (pig, cow): | 90, 48 |
Show alignments to all cow chromosomes.