Cow genome map
| Conread name: | Pig3-SRG8022L11 |
| Conread position: | 171-296 |
| Cow position: | chr29:19949307-19949431 (view UCSC Genome Browser custom track) |
| Alignm length: | 126 |
| Alignm identity: | 104 |
| Alignm E-value: | 5e-29 |
| Alignm gaps (pig, cow): | 84, 0 |
| Conread position: | 172-296 |
| Cow position: | chr29:22735107-22734983 (view UCSC Genome Browser custom track) |
| Alignm length: | 126 |
| Alignm identity: | 105 |
| Alignm E-value: | 5e-29 |
| Alignm gaps (pig, cow): | 112, 84 |
| Conread position: | 172-296 |
| Cow position: | chr29:36781306-36781180 (view UCSC Genome Browser custom track) |
| Alignm length: | 128 |
| Alignm identity: | 101 |
| Alignm E-value: | 3e-23 |
| Alignm gaps (pig, cow): | 39, 84 |
| Conread position: | 172-347 |
| Cow position: | chr29:2262994-2262823 (view UCSC Genome Browser custom track) |
| Alignm length: | 176 |
| Alignm identity: | 125 |
| Alignm E-value: | 2e-22 |
| Alignm gaps (pig, cow): | 81, 0 |
| Conread position: | 172-372 |
| Cow position: | chr29:10156303-10156106 (view UCSC Genome Browser custom track) |
| Alignm length: | 203 |
| Alignm identity: | 147 |
| Alignm E-value: | 1e-27 |
| Alignm gaps (pig, cow): | 135, 18 |
| Conread position: | 172-444 |
| Cow position: | chr29:13028442-13028703 (view UCSC Genome Browser custom track) |
| Alignm length: | 274 |
| Alignm identity: | 180 |
| Alignm E-value: | 6e-21 |
| Alignm gaps (pig, cow): | 207, 36 |
| Conread position: | 174-293 |
| Cow position: | chr29:36217115-36217233 (view UCSC Genome Browser custom track) |
| Alignm length: | 120 |
| Alignm identity: | 93 |
| Alignm E-value: | 2e-21 |
| Alignm gaps (pig, cow): | 81, 0 |
| Conread position: | 174-295 |
| Cow position: | chr29:19762271-19762391 (view UCSC Genome Browser custom track) |
| Alignm length: | 122 |
| Alignm identity: | 94 |
| Alignm E-value: | 2e-21 |
| Alignm gaps (pig, cow): | 77, 0 |
| Conread position: | 174-295 |
| Cow position: | chr29:22723601-22723724 (view UCSC Genome Browser custom track) |
| Alignm length: | 125 |
| Alignm identity: | 97 |
| Alignm E-value: | 6e-21 |
| Alignm gaps (pig, cow): | 32, 84 |
| Conread position: | 174-296 |
| Cow position: | chr29:17109960-17110081 (view UCSC Genome Browser custom track) |
| Alignm length: | 123 |
| Alignm identity: | 99 |
| Alignm E-value: | 1e-25 |
| Alignm gaps (pig, cow): | 79, 0 |
| Conread position: | 174-296 |
| Cow position: | chr29:23825210-23825086 (view UCSC Genome Browser custom track) |
| Alignm length: | 126 |
| Alignm identity: | 100 |
| Alignm E-value: | 3e-23 |
| Alignm gaps (pig, cow): | 36, 84 |
| Conread position: | 174-296 |
| Cow position: | chr29:41112879-41112757 (view UCSC Genome Browser custom track) |
| Alignm length: | 126 |
| Alignm identity: | 102 |
| Alignm E-value: | 9e-24 |
| Alignm gaps (pig, cow): | 33, 21 |
| Conread position: | 174-308 |
| Cow position: | chr29:34358978-34358843 (view UCSC Genome Browser custom track) |
| Alignm length: | 138 |
| Alignm identity: | 105 |
| Alignm E-value: | 2e-21 |
| Alignm gaps (pig, cow): | 37, 84 |
| Conread position: | 174-315 |
| Cow position: | chr29:32211066-32210927 (view UCSC Genome Browser custom track) |
| Alignm length: | 143 |
| Alignm identity: | 108 |
| Alignm E-value: | 7e-22 |
| Alignm gaps (pig, cow): | 123, 26 |
| Conread position: | 174-324 |
| Cow position: | chr29:23243878-23243725 (view UCSC Genome Browser custom track) |
| Alignm length: | 156 |
| Alignm identity: | 116 |
| Alignm E-value: | 2e-21 |
| Alignm gaps (pig, cow): | 34, 84 |
| Conread position: | 174-325 |
| Cow position: | chr29:26559243-26559094 (view UCSC Genome Browser custom track) |
| Alignm length: | 153 |
| Alignm identity: | 113 |
| Alignm E-value: | 7e-22 |
| Alignm gaps (pig, cow): | 146, 81 |
| Conread position: | 174-349 |
| Cow position: | chr29:11527789-11527610 (view UCSC Genome Browser custom track) |
| Alignm length: | 181 |
| Alignm identity: | 132 |
| Alignm E-value: | 1e-24 |
| Alignm gaps (pig, cow): | 124, 81 |
| Conread position: | 174-351 |
| Cow position: | chr29:8926461-8926285 (view UCSC Genome Browser custom track) |
| Alignm length: | 181 |
| Alignm identity: | 140 |
| Alignm E-value: | 2e-32 |
| Alignm gaps (pig, cow): | 33, 85 |
| Conread position: | 174-351 |
| Cow position: | chr29:19125322-19125492 (view UCSC Genome Browser custom track) |
| Alignm length: | 181 |
| Alignm identity: | 134 |
| Alignm E-value: | 8e-23 |
| Alignm gaps (pig, cow): | 38, 84 |
| Conread position: | 174-389 |
| Cow position: | chr29:25737414-25737204 (view UCSC Genome Browser custom track) |
| Alignm length: | 219 |
| Alignm identity: | 154 |
| Alignm E-value: | 9e-24 |
| Alignm gaps (pig, cow): | 34, 84 |
| Conread position: | 175-283 |
| Cow position: | chr29:22028951-22028844 (view UCSC Genome Browser custom track) |
| Alignm length: | 109 |
| Alignm identity: | 87 |
| Alignm E-value: | 6e-21 |
| Alignm gaps (pig, cow): | 78, 0 |
| Conread position: | 175-295 |
| Cow position: | chr29:36530868-36530991 (view UCSC Genome Browser custom track) |
| Alignm length: | 125 |
| Alignm identity: | 98 |
| Alignm E-value: | 6e-21 |
| Alignm gaps (pig, cow): | 34, 83 |
| Conread position: | 175-345 |
| Cow position: | chr29:36210147-36210304 (view UCSC Genome Browser custom track) |
| Alignm length: | 171 |
| Alignm identity: | 134 |
| Alignm E-value: | 4e-28 |
| Alignm gaps (pig, cow): | 36, 0 |
| Conread position: | 175-350 |
| Cow position: | chr29:34687836-34688016 (view UCSC Genome Browser custom track) |
| Alignm length: | 182 |
| Alignm identity: | 134 |
| Alignm E-value: | 4e-26 |
| Alignm gaps (pig, cow): | 36, 83 |
| Conread position: | 175-374 |
| Cow position: | chr29:38980073-38979867 (view UCSC Genome Browser custom track) |
| Alignm length: | 210 |
| Alignm identity: | 148 |
| Alignm E-value: | 6e-21 |
| Alignm gaps (pig, cow): | 18, 83 |
| Conread position: | 175-415 |
| Cow position: | chr29:28840157-28840396 (view UCSC Genome Browser custom track) |
| Alignm length: | 245 |
| Alignm identity: | 170 |
| Alignm E-value: | 1e-28 |
| Alignm gaps (pig, cow): | 30, 83 |
| Conread position: | 176-349 |
| Cow position: | chr29:29324418-29324260 (view UCSC Genome Browser custom track) |
| Alignm length: | 174 |
| Alignm identity: | 137 |
| Alignm E-value: | 4e-28 |
| Alignm gaps (pig, cow): | 57, 0 |
| Conread position: | 181-448 |
| Cow position: | chr29:17022157-17022422 (view UCSC Genome Browser custom track) |
| Alignm length: | 271 |
| Alignm identity: | 188 |
| Alignm E-value: | 3e-34 |
| Alignm gaps (pig, cow): | 31, 78 |
| Conread position: | 182-351 |
| Cow position: | chr29:18579827-18579657 (view UCSC Genome Browser custom track) |
| Alignm length: | 173 |
| Alignm identity: | 127 |
| Alignm E-value: | 3e-25 |
| Alignm gaps (pig, cow): | 135, 25 |
| Conread position: | 190-404 |
| Cow position: | chr29:28948990-28949204 (view UCSC Genome Browser custom track) |
| Alignm length: | 221 |
| Alignm identity: | 156 |
| Alignm E-value: | 1e-24 |
| Alignm gaps (pig, cow): | 21, 65 |
| Conread position: | 196-416 |
| Cow position: | chr29:35071062-35070842 (view UCSC Genome Browser custom track) |
| Alignm length: | 226 |
| Alignm identity: | 163 |
| Alignm E-value: | 2e-29 |
| Alignm gaps (pig, cow): | 15, 62 |
Show alignments to all cow chromosomes.