Cow genome map

Conread name: Pig3-SRG8022L11

Conread position: 137-373
Cow position: chr5:36822876-36823110 (view UCSC Genome Browser custom track)
Alignm length: 241
Alignm identity: 164
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 11, 15

Conread position: 170-304
Cow position: chr5:34288226-34288095 (view UCSC Genome Browser custom track)
Alignm length: 136
Alignm identity: 115
Alignm E-value: 3e-31
Alignm gaps (pig, cow): 107, 86

Conread position: 172-293
Cow position: chr5:17104879-17104999 (view UCSC Genome Browser custom track)
Alignm length: 122
Alignm identity: 102
Alignm E-value: 8e-29
Alignm gaps (pig, cow): 82, 0

Conread position: 172-294
Cow position: chr5:54375476-54375352 (view UCSC Genome Browser custom track)
Alignm length: 126
Alignm identity: 99
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 30, 86

Conread position: 172-296
Cow position: chr5:69636250-69636376 (view UCSC Genome Browser custom track)
Alignm length: 128
Alignm identity: 99
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 41, 86

Conread position: 172-303
Cow position: chr5:17602178-17602047 (view UCSC Genome Browser custom track)
Alignm length: 135
Alignm identity: 109
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 35, 27

Conread position: 172-328
Cow position: chr5:43992350-43992505 (view UCSC Genome Browser custom track)
Alignm length: 160
Alignm identity: 118
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 39, 84

Conread position: 172-349
Cow position: chr5:58555163-58555344 (view UCSC Genome Browser custom track)
Alignm length: 183
Alignm identity: 131
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 34, 84

Conread position: 172-379
Cow position: chr5:57489919-57489715 (view UCSC Genome Browser custom track)
Alignm length: 212
Alignm identity: 149
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 127, 76

Conread position: 172-412
Cow position: chr5:23678673-23678426 (view UCSC Genome Browser custom track)
Alignm length: 250
Alignm identity: 169
Alignm E-value: 5e-24
Alignm gaps (pig, cow): 114, 76

Conread position: 174-288
Cow position: chr5:35982710-35982591 (view UCSC Genome Browser custom track)
Alignm length: 121
Alignm identity: 98
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 36, 85

Conread position: 174-289
Cow position: chr5:29148919-29149033 (view UCSC Genome Browser custom track)
Alignm length: 116
Alignm identity: 95
Alignm E-value: 5e-25
Alignm gaps (pig, cow): 80, 0

Conread position: 174-294
Cow position: chr5:44446837-44446715 (view UCSC Genome Browser custom track)
Alignm length: 124
Alignm identity: 101
Alignm E-value: 5e-25
Alignm gaps (pig, cow): 36, 84

Conread position: 174-295
Cow position: chr5:30276718-30276841 (view UCSC Genome Browser custom track)
Alignm length: 125
Alignm identity: 102
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 38, 84

Conread position: 174-295
Cow position: chr5:57686709-57686586 (view UCSC Genome Browser custom track)
Alignm length: 125
Alignm identity: 99
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 38, 82

Conread position: 174-296
Cow position: chr5:16893743-16893620 (view UCSC Genome Browser custom track)
Alignm length: 126
Alignm identity: 99
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 36, 84

Conread position: 174-296
Cow position: chr5:40109521-40109644 (view UCSC Genome Browser custom track)
Alignm length: 126
Alignm identity: 105
Alignm E-value: 7e-27
Alignm gaps (pig, cow): 37, 47

Conread position: 174-296
Cow position: chr5:45397601-45397721 (view UCSC Genome Browser custom track)
Alignm length: 123
Alignm identity: 97
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 52, 0

Conread position: 174-296
Cow position: chr5:45845663-45845536 (view UCSC Genome Browser custom track)
Alignm length: 130
Alignm identity: 104
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 31, 88

Conread position: 174-296
Cow position: chr5:47601840-47601964 (view UCSC Genome Browser custom track)
Alignm length: 126
Alignm identity: 99
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 38, 85

Conread position: 174-296
Cow position: chr5:51289563-51289443 (view UCSC Genome Browser custom track)
Alignm length: 123
Alignm identity: 96
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 81, 0

Conread position: 174-296
Cow position: chr5:60523763-60523885 (view UCSC Genome Browser custom track)
Alignm length: 124
Alignm identity: 100
Alignm E-value: 5e-25
Alignm gaps (pig, cow): 117, 78

Conread position: 174-297
Cow position: chr5:57101751-57101630 (view UCSC Genome Browser custom track)
Alignm length: 125
Alignm identity: 98
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 67, 82

Conread position: 174-304
Cow position: chr5:54312629-54312760 (view UCSC Genome Browser custom track)
Alignm length: 134
Alignm identity: 103
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 34, 82

Conread position: 174-305
Cow position: chr5:64592067-64591935 (view UCSC Genome Browser custom track)
Alignm length: 135
Alignm identity: 104
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 37, 84

Conread position: 174-314
Cow position: chr5:66551869-66551727 (view UCSC Genome Browser custom track)
Alignm length: 145
Alignm identity: 110
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 34, 85

Conread position: 174-315
Cow position: chr5:4710123-4709979 (view UCSC Genome Browser custom track)
Alignm length: 146
Alignm identity: 110
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 31, 81

Conread position: 174-331
Cow position: chr5:43929707-43929552 (view UCSC Genome Browser custom track)
Alignm length: 161
Alignm identity: 121
Alignm E-value: 4e-22
Alignm gaps (pig, cow): 15, 36

Conread position: 174-350
Cow position: chr5:60599176-60598998 (view UCSC Genome Browser custom track)
Alignm length: 183
Alignm identity: 134
Alignm E-value: 4e-23
Alignm gaps (pig, cow): 35, 84

Conread position: 174-351
Cow position: chr5:20288235-20288068 (view UCSC Genome Browser custom track)
Alignm length: 181
Alignm identity: 136
Alignm E-value: 4e-23
Alignm gaps (pig, cow): 36, 84

Conread position: 174-385
Cow position: chr5:44028275-44028072 (view UCSC Genome Browser custom track)
Alignm length: 213
Alignm identity: 152
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 133, 33

Conread position: 174-398
Cow position: chr5:39035808-39036038 (view UCSC Genome Browser custom track)
Alignm length: 235
Alignm identity: 162
Alignm E-value: 4e-22
Alignm gaps (pig, cow): 37, 82

Conread position: 174-400
Cow position: chr5:56014759-56014990 (view UCSC Genome Browser custom track)
Alignm length: 235
Alignm identity: 164
Alignm E-value: 5e-25
Alignm gaps (pig, cow): 37, 84

Conread position: 174-419
Cow position: chr5:55849913-55850158 (view UCSC Genome Browser custom track)
Alignm length: 253
Alignm identity: 178
Alignm E-value: 9e-30
Alignm gaps (pig, cow): 126, 81

Conread position: 174-426
Cow position: chr5:55232783-55232534 (view UCSC Genome Browser custom track)
Alignm length: 255
Alignm identity: 167
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 127, 135

Conread position: 174-441
Cow position: chr5:31640453-31640729 (view UCSC Genome Browser custom track)
Alignm length: 279
Alignm identity: 182
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 32, 84

Conread position: 174-470
Cow position: chr5:15363910-15364207 (view UCSC Genome Browser custom track)
Alignm length: 303
Alignm identity: 197
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 37, 84

Conread position: 174-475
Cow position: chr5:34915025-34914724 (view UCSC Genome Browser custom track)
Alignm length: 308
Alignm identity: 202
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 36, 82

Conread position: 175-287
Cow position: chr5:9233960-9233845 (view UCSC Genome Browser custom track)
Alignm length: 117
Alignm identity: 96
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 34, 84

Conread position: 175-289
Cow position: chr5:69731532-69731645 (view UCSC Genome Browser custom track)
Alignm length: 115
Alignm identity: 91
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 78, 0

Conread position: 175-295
Cow position: chr5:35190139-35190261 (view UCSC Genome Browser custom track)
Alignm length: 124
Alignm identity: 99
Alignm E-value: 4e-23
Alignm gaps (pig, cow): 33, 83

Conread position: 175-295
Cow position: chr5:38168923-38169046 (view UCSC Genome Browser custom track)
Alignm length: 124
Alignm identity: 98
Alignm E-value: 4e-23
Alignm gaps (pig, cow): 36, 0

Conread position: 175-296
Cow position: chr5:55942350-55942227 (view UCSC Genome Browser custom track)
Alignm length: 125
Alignm identity: 98
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 30, 83

Conread position: 175-305
Cow position: chr5:22795246-22795374 (view UCSC Genome Browser custom track)
Alignm length: 131
Alignm identity: 105
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 80, 0

Conread position: 175-389
Cow position: chr5:50821812-50822038 (view UCSC Genome Browser custom track)
Alignm length: 231
Alignm identity: 163
Alignm E-value: 4e-22
Alignm gaps (pig, cow): 30, 83

Conread position: 175-400
Cow position: chr5:25495329-25495112 (view UCSC Genome Browser custom track)
Alignm length: 232
Alignm identity: 169
Alignm E-value: 7e-28
Alignm gaps (pig, cow): 36, 89

Conread position: 176-324
Cow position: chr5:56338991-56338839 (view UCSC Genome Browser custom track)
Alignm length: 154
Alignm identity: 114
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 33, 82

Conread position: 176-398
Cow position: chr5:9894093-9893874 (view UCSC Genome Browser custom track)
Alignm length: 227
Alignm identity: 160
Alignm E-value: 6e-26
Alignm gaps (pig, cow): 35, 82

Conread position: 177-295
Cow position: chr5:30253772-30253892 (view UCSC Genome Browser custom track)
Alignm length: 122
Alignm identity: 98
Alignm E-value: 4e-23
Alignm gaps (pig, cow): 34, 82

Conread position: 180-403
Cow position: chr5:38647674-38647902 (view UCSC Genome Browser custom track)
Alignm length: 232
Alignm identity: 164
Alignm E-value: 2e-27
Alignm gaps (pig, cow): 31, 78

Conread position: 181-297
Cow position: chr5:25035220-25035105 (view UCSC Genome Browser custom track)
Alignm length: 117
Alignm identity: 97
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 72, 0

Conread position: 190-324
Cow position: chr5:1090775-1090641 (view UCSC Genome Browser custom track)
Alignm length: 137
Alignm identity: 111
Alignm E-value: 2e-27
Alignm gaps (pig, cow): 109, 62

Conread position: 190-406
Cow position: chr5:46421630-46421845 (view UCSC Genome Browser custom track)
Alignm length: 223
Alignm identity: 154
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 21, 68

Conread position: 201-350
Cow position: chr5:14354133-14354284 (view UCSC Genome Browser custom track)
Alignm length: 154
Alignm identity: 121
Alignm E-value: 7e-27
Alignm gaps (pig, cow): 90, 54

Conread position: 205-348
Cow position: chr5:61875599-61875741 (view UCSC Genome Browser custom track)
Alignm length: 145
Alignm identity: 109
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 112, 48

Show alignments to all cow chromosomes.