Cow genome map
| Conread name: | Pig3-SRG8022L11 |
| Conread position: | 165-286 |
| Cow position: | chr7:9733974-9734098 (view UCSC Genome Browser custom track) |
| Alignm length: | 126 |
| Alignm identity: | 101 |
| Alignm E-value: | 4e-23 |
| Alignm gaps (pig, cow): | 13, 94 |
| Conread position: | 169-296 |
| Cow position: | chr7:68170560-68170432 (view UCSC Genome Browser custom track) |
| Alignm length: | 130 |
| Alignm identity: | 99 |
| Alignm E-value: | 9e-21 |
| Alignm gaps (pig, cow): | 38, 98 |
| Conread position: | 170-294 |
| Cow position: | chr7:28917131-28917257 (view UCSC Genome Browser custom track) |
| Alignm length: | 128 |
| Alignm identity: | 101 |
| Alignm E-value: | 4e-23 |
| Alignm gaps (pig, cow): | 41, 88 |
| Conread position: | 171-363 |
| Cow position: | chr7:14867633-14867435 (view UCSC Genome Browser custom track) |
| Alignm length: | 201 |
| Alignm identity: | 152 |
| Alignm E-value: | 3e-32 |
| Alignm gaps (pig, cow): | 135, 84 |
| Conread position: | 172-289 |
| Cow position: | chr7:36996404-36996520 (view UCSC Genome Browser custom track) |
| Alignm length: | 121 |
| Alignm identity: | 99 |
| Alignm E-value: | 4e-22 |
| Alignm gaps (pig, cow): | 39, 86 |
| Conread position: | 172-324 |
| Cow position: | chr7:50857994-50858149 (view UCSC Genome Browser custom track) |
| Alignm length: | 159 |
| Alignm identity: | 120 |
| Alignm E-value: | 1e-21 |
| Alignm gaps (pig, cow): | 22, 85 |
| Conread position: | 172-408 |
| Cow position: | chr7:24460993-24461238 (view UCSC Genome Browser custom track) |
| Alignm length: | 248 |
| Alignm identity: | 167 |
| Alignm E-value: | 1e-21 |
| Alignm gaps (pig, cow): | 35, 84 |
| Conread position: | 172-427 |
| Cow position: | chr7:11015724-11015977 (view UCSC Genome Browser custom track) |
| Alignm length: | 260 |
| Alignm identity: | 178 |
| Alignm E-value: | 2e-28 |
| Alignm gaps (pig, cow): | 35, 84 |
| Conread position: | 174-283 |
| Cow position: | chr7:18288222-18288115 (view UCSC Genome Browser custom track) |
| Alignm length: | 110 |
| Alignm identity: | 89 |
| Alignm E-value: | 3e-21 |
| Alignm gaps (pig, cow): | 20, 0 |
| Conread position: | 174-285 |
| Cow position: | chr7:29121947-29122057 (view UCSC Genome Browser custom track) |
| Alignm length: | 112 |
| Alignm identity: | 92 |
| Alignm E-value: | 4e-24 |
| Alignm gaps (pig, cow): | 81, 0 |
| Conread position: | 174-287 |
| Cow position: | chr7:15559731-15559846 (view UCSC Genome Browser custom track) |
| Alignm length: | 117 |
| Alignm identity: | 96 |
| Alignm E-value: | 1e-23 |
| Alignm gaps (pig, cow): | 36, 84 |
| Conread position: | 174-293 |
| Cow position: | chr7:11487628-11487509 (view UCSC Genome Browser custom track) |
| Alignm length: | 122 |
| Alignm identity: | 100 |
| Alignm E-value: | 4e-24 |
| Alignm gaps (pig, cow): | 35, 83 |
| Conread position: | 174-293 |
| Cow position: | chr7:31523589-31523710 (view UCSC Genome Browser custom track) |
| Alignm length: | 123 |
| Alignm identity: | 97 |
| Alignm E-value: | 1e-21 |
| Alignm gaps (pig, cow): | 36, 84 |
| Conread position: | 174-295 |
| Cow position: | chr7:9660321-9660441 (view UCSC Genome Browser custom track) |
| Alignm length: | 122 |
| Alignm identity: | 99 |
| Alignm E-value: | 5e-26 |
| Alignm gaps (pig, cow): | 81, 0 |
| Conread position: | 174-295 |
| Cow position: | chr7:12495076-12494953 (view UCSC Genome Browser custom track) |
| Alignm length: | 125 |
| Alignm identity: | 97 |
| Alignm E-value: | 9e-21 |
| Alignm gaps (pig, cow): | 37, 84 |
| Conread position: | 174-295 |
| Cow position: | chr7:27079671-27079796 (view UCSC Genome Browser custom track) |
| Alignm length: | 127 |
| Alignm identity: | 101 |
| Alignm E-value: | 1e-21 |
| Alignm gaps (pig, cow): | 33, 84 |
| Conread position: | 174-295 |
| Cow position: | chr7:46856919-46856797 (view UCSC Genome Browser custom track) |
| Alignm length: | 125 |
| Alignm identity: | 99 |
| Alignm E-value: | 1e-21 |
| Alignm gaps (pig, cow): | 37, 83 |
| Conread position: | 174-295 |
| Cow position: | chr7:53785936-53785811 (view UCSC Genome Browser custom track) |
| Alignm length: | 127 |
| Alignm identity: | 100 |
| Alignm E-value: | 9e-21 |
| Alignm gaps (pig, cow): | 33, 87 |
| Conread position: | 174-296 |
| Cow position: | chr7:5199504-5199384 (view UCSC Genome Browser custom track) |
| Alignm length: | 123 |
| Alignm identity: | 97 |
| Alignm E-value: | 1e-22 |
| Alignm gaps (pig, cow): | 81, 0 |
| Conread position: | 174-296 |
| Cow position: | chr7:17750798-17750674 (view UCSC Genome Browser custom track) |
| Alignm length: | 126 |
| Alignm identity: | 102 |
| Alignm E-value: | 5e-25 |
| Alignm gaps (pig, cow): | 37, 85 |
| Conread position: | 174-296 |
| Cow position: | chr7:26263609-26263481 (view UCSC Genome Browser custom track) |
| Alignm length: | 129 |
| Alignm identity: | 108 |
| Alignm E-value: | 2e-27 |
| Alignm gaps (pig, cow): | 16, 0 |
| Conread position: | 174-296 |
| Cow position: | chr7:29505159-29505283 (view UCSC Genome Browser custom track) |
| Alignm length: | 126 |
| Alignm identity: | 98 |
| Alignm E-value: | 3e-21 |
| Alignm gaps (pig, cow): | 32, 82 |
| Conread position: | 174-296 |
| Cow position: | chr7:39415954-39416078 (view UCSC Genome Browser custom track) |
| Alignm length: | 126 |
| Alignm identity: | 98 |
| Alignm E-value: | 3e-21 |
| Alignm gaps (pig, cow): | 36, 84 |
| Conread position: | 174-303 |
| Cow position: | chr7:26737302-26737172 (view UCSC Genome Browser custom track) |
| Alignm length: | 133 |
| Alignm identity: | 103 |
| Alignm E-value: | 1e-21 |
| Alignm gaps (pig, cow): | 37, 82 |
| Conread position: | 174-304 |
| Cow position: | chr7:11796858-11796727 (view UCSC Genome Browser custom track) |
| Alignm length: | 134 |
| Alignm identity: | 105 |
| Alignm E-value: | 4e-23 |
| Alignm gaps (pig, cow): | 37, 84 |
| Conread position: | 174-323 |
| Cow position: | chr7:3256301-3256151 (view UCSC Genome Browser custom track) |
| Alignm length: | 154 |
| Alignm identity: | 122 |
| Alignm E-value: | 7e-28 |
| Alignm gaps (pig, cow): | 37, 86 |
| Conread position: | 174-324 |
| Cow position: | chr7:43307219-43307370 (view UCSC Genome Browser custom track) |
| Alignm length: | 155 |
| Alignm identity: | 121 |
| Alignm E-value: | 2e-26 |
| Alignm gaps (pig, cow): | 35, 84 |
| Conread position: | 174-351 |
| Cow position: | chr7:17713427-17713257 (view UCSC Genome Browser custom track) |
| Alignm length: | 181 |
| Alignm identity: | 139 |
| Alignm E-value: | 2e-27 |
| Alignm gaps (pig, cow): | 35, 84 |
| Conread position: | 174-351 |
| Cow position: | chr7:41315389-41315220 (view UCSC Genome Browser custom track) |
| Alignm length: | 178 |
| Alignm identity: | 130 |
| Alignm E-value: | 1e-23 |
| Alignm gaps (pig, cow): | 81, 0 |
| Conread position: | 174-363 |
| Cow position: | chr7:62733231-62733411 (view UCSC Genome Browser custom track) |
| Alignm length: | 190 |
| Alignm identity: | 135 |
| Alignm E-value: | 3e-21 |
| Alignm gaps (pig, cow): | 26, 0 |
| Conread position: | 174-373 |
| Cow position: | chr7:22793388-22793591 (view UCSC Genome Browser custom track) |
| Alignm length: | 205 |
| Alignm identity: | 140 |
| Alignm E-value: | 1e-21 |
| Alignm gaps (pig, cow): | 37, 84 |
| Conread position: | 174-411 |
| Cow position: | chr7:57243188-57242962 (view UCSC Genome Browser custom track) |
| Alignm length: | 241 |
| Alignm identity: | 167 |
| Alignm E-value: | 3e-21 |
| Alignm gaps (pig, cow): | 34, 84 |
| Conread position: | 174-420 |
| Cow position: | chr7:8025397-8025628 (view UCSC Genome Browser custom track) |
| Alignm length: | 247 |
| Alignm identity: | 173 |
| Alignm E-value: | 2e-26 |
| Alignm gaps (pig, cow): | 33, 0 |
| Conread position: | 175-294 |
| Cow position: | chr7:20534917-20535039 (view UCSC Genome Browser custom track) |
| Alignm length: | 124 |
| Alignm identity: | 99 |
| Alignm E-value: | 1e-21 |
| Alignm gaps (pig, cow): | 30, 83 |
| Conread position: | 175-295 |
| Cow position: | chr7:9077765-9077642 (view UCSC Genome Browser custom track) |
| Alignm length: | 124 |
| Alignm identity: | 99 |
| Alignm E-value: | 4e-24 |
| Alignm gaps (pig, cow): | 33, 0 |
| Conread position: | 175-295 |
| Cow position: | chr7:53053358-53053236 (view UCSC Genome Browser custom track) |
| Alignm length: | 124 |
| Alignm identity: | 101 |
| Alignm E-value: | 5e-25 |
| Alignm gaps (pig, cow): | 36, 83 |
| Conread position: | 175-296 |
| Cow position: | chr7:8658560-8658683 (view UCSC Genome Browser custom track) |
| Alignm length: | 125 |
| Alignm identity: | 100 |
| Alignm E-value: | 1e-23 |
| Alignm gaps (pig, cow): | 31, 83 |
| Conread position: | 175-297 |
| Cow position: | chr7:50021413-50021289 (view UCSC Genome Browser custom track) |
| Alignm length: | 127 |
| Alignm identity: | 100 |
| Alignm E-value: | 9e-21 |
| Alignm gaps (pig, cow): | 30, 83 |
| Conread position: | 175-304 |
| Cow position: | chr7:63121367-63121240 (view UCSC Genome Browser custom track) |
| Alignm length: | 131 |
| Alignm identity: | 101 |
| Alignm E-value: | 9e-21 |
| Alignm gaps (pig, cow): | 97, 10 |
| Conread position: | 175-330 |
| Cow position: | chr7:26631768-26631610 (view UCSC Genome Browser custom track) |
| Alignm length: | 161 |
| Alignm identity: | 121 |
| Alignm E-value: | 1e-23 |
| Alignm gaps (pig, cow): | 30, 84 |
| Conread position: | 175-351 |
| Cow position: | chr7:10943515-10943338 (view UCSC Genome Browser custom track) |
| Alignm length: | 181 |
| Alignm identity: | 135 |
| Alignm E-value: | 2e-27 |
| Alignm gaps (pig, cow): | 31, 83 |
| Conread position: | 175-383 |
| Cow position: | chr7:36278344-36278553 (view UCSC Genome Browser custom track) |
| Alignm length: | 215 |
| Alignm identity: | 162 |
| Alignm E-value: | 4e-33 |
| Alignm gaps (pig, cow): | 37, 82 |
| Conread position: | 176-315 |
| Cow position: | chr7:23936157-23936295 (view UCSC Genome Browser custom track) |
| Alignm length: | 143 |
| Alignm identity: | 109 |
| Alignm E-value: | 3e-21 |
| Alignm gaps (pig, cow): | 30, 82 |
| Conread position: | 176-328 |
| Cow position: | chr7:64364482-64364329 (view UCSC Genome Browser custom track) |
| Alignm length: | 157 |
| Alignm identity: | 116 |
| Alignm E-value: | 9e-21 |
| Alignm gaps (pig, cow): | 35, 80 |
| Conread position: | 176-351 |
| Cow position: | chr7:34422220-34422048 (view UCSC Genome Browser custom track) |
| Alignm length: | 178 |
| Alignm identity: | 135 |
| Alignm E-value: | 2e-28 |
| Alignm gaps (pig, cow): | 130, 25 |
| Conread position: | 176-402 |
| Cow position: | chr7:36665371-36665587 (view UCSC Genome Browser custom track) |
| Alignm length: | 233 |
| Alignm identity: | 166 |
| Alignm E-value: | 1e-23 |
| Alignm gaps (pig, cow): | 32, 67 |
| Conread position: | 177-305 |
| Cow position: | chr7:23169880-23170009 (view UCSC Genome Browser custom track) |
| Alignm length: | 132 |
| Alignm identity: | 102 |
| Alignm E-value: | 3e-21 |
| Alignm gaps (pig, cow): | 34, 79 |
| Conread position: | 178-295 |
| Cow position: | chr7:12918529-12918412 (view UCSC Genome Browser custom track) |
| Alignm length: | 119 |
| Alignm identity: | 96 |
| Alignm E-value: | 1e-23 |
| Alignm gaps (pig, cow): | 109, 77 |
| Conread position: | 178-398 |
| Cow position: | chr7:23671800-23672021 (view UCSC Genome Browser custom track) |
| Alignm length: | 226 |
| Alignm identity: | 153 |
| Alignm E-value: | 1e-21 |
| Alignm gaps (pig, cow): | 33, 78 |
| Conread position: | 181-476 |
| Cow position: | chr7:27283729-27284015 (view UCSC Genome Browser custom track) |
| Alignm length: | 298 |
| Alignm identity: | 196 |
| Alignm E-value: | 4e-24 |
| Alignm gaps (pig, cow): | 136, 26 |
| Conread position: | 196-364 |
| Cow position: | chr7:58362998-58363164 (view UCSC Genome Browser custom track) |
| Alignm length: | 172 |
| Alignm identity: | 127 |
| Alignm E-value: | 4e-23 |
| Alignm gaps (pig, cow): | 12, 42 |
| Conread position: | 203-491 |
| Cow position: | chr7:20181122-20180826 (view UCSC Genome Browser custom track) |
| Alignm length: | 298 |
| Alignm identity: | 195 |
| Alignm E-value: | 2e-25 |
| Alignm gaps (pig, cow): | 85, 52 |
Show alignments to all cow chromosomes.