Cow genome map
| Conread name: | Pig3-SRG8022L11 |
| Conread position: | 172-293 |
| Cow position: | chr8:45925630-45925750 (view UCSC Genome Browser custom track) |
| Alignm length: | 122 |
| Alignm identity: | 94 |
| Alignm E-value: | 3e-21 |
| Alignm gaps (pig, cow): | 81, 0 |
| Conread position: | 172-295 |
| Cow position: | chr8:20107780-20107655 (view UCSC Genome Browser custom track) |
| Alignm length: | 127 |
| Alignm identity: | 98 |
| Alignm E-value: | 9e-21 |
| Alignm gaps (pig, cow): | 39, 86 |
| Conread position: | 172-354 |
| Cow position: | chr8:3914602-3914774 (view UCSC Genome Browser custom track) |
| Alignm length: | 186 |
| Alignm identity: | 139 |
| Alignm E-value: | 9e-22 |
| Alignm gaps (pig, cow): | 39, 86 |
| Conread position: | 172-369 |
| Cow position: | chr8:23179530-23179337 (view UCSC Genome Browser custom track) |
| Alignm length: | 200 |
| Alignm identity: | 143 |
| Alignm E-value: | 4e-24 |
| Alignm gaps (pig, cow): | 145, 35 |
| Conread position: | 172-417 |
| Cow position: | chr8:45126224-45125976 (view UCSC Genome Browser custom track) |
| Alignm length: | 254 |
| Alignm identity: | 177 |
| Alignm E-value: | 2e-27 |
| Alignm gaps (pig, cow): | 39, 86 |
| Conread position: | 172-427 |
| Cow position: | chr8:47169955-47170214 (view UCSC Genome Browser custom track) |
| Alignm length: | 262 |
| Alignm identity: | 174 |
| Alignm E-value: | 4e-25 |
| Alignm gaps (pig, cow): | 35, 86 |
| Conread position: | 174-284 |
| Cow position: | chr8:20073167-20073055 (view UCSC Genome Browser custom track) |
| Alignm length: | 114 |
| Alignm identity: | 92 |
| Alignm E-value: | 3e-21 |
| Alignm gaps (pig, cow): | 34, 84 |
| Conread position: | 174-286 |
| Cow position: | chr8:55070730-55070844 (view UCSC Genome Browser custom track) |
| Alignm length: | 116 |
| Alignm identity: | 93 |
| Alignm E-value: | 3e-21 |
| Alignm gaps (pig, cow): | 37, 82 |
| Conread position: | 174-289 |
| Cow position: | chr8:33432272-33432389 (view UCSC Genome Browser custom track) |
| Alignm length: | 119 |
| Alignm identity: | 95 |
| Alignm E-value: | 3e-21 |
| Alignm gaps (pig, cow): | 17, 82 |
| Conread position: | 174-292 |
| Cow position: | chr8:37855387-37855504 (view UCSC Genome Browser custom track) |
| Alignm length: | 119 |
| Alignm identity: | 92 |
| Alignm E-value: | 9e-21 |
| Alignm gaps (pig, cow): | 79, 0 |
| Conread position: | 174-294 |
| Cow position: | chr8:53587304-53587185 (view UCSC Genome Browser custom track) |
| Alignm length: | 121 |
| Alignm identity: | 97 |
| Alignm E-value: | 1e-24 |
| Alignm gaps (pig, cow): | 81, 0 |
| Conread position: | 174-294 |
| Cow position: | chr8:61556940-61556819 (view UCSC Genome Browser custom track) |
| Alignm length: | 123 |
| Alignm identity: | 97 |
| Alignm E-value: | 3e-22 |
| Alignm gaps (pig, cow): | 38, 83 |
| Conread position: | 174-295 |
| Cow position: | chr8:10081918-10082038 (view UCSC Genome Browser custom track) |
| Alignm length: | 123 |
| Alignm identity: | 101 |
| Alignm E-value: | 1e-25 |
| Alignm gaps (pig, cow): | 98, 81 |
| Conread position: | 174-295 |
| Cow position: | chr8:42762418-42762295 (view UCSC Genome Browser custom track) |
| Alignm length: | 125 |
| Alignm identity: | 100 |
| Alignm E-value: | 1e-23 |
| Alignm gaps (pig, cow): | 37, 85 |
| Conread position: | 174-295 |
| Cow position: | chr8:48527953-48527826 (view UCSC Genome Browser custom track) |
| Alignm length: | 130 |
| Alignm identity: | 104 |
| Alignm E-value: | 9e-21 |
| Alignm gaps (pig, cow): | 32, 89 |
| Conread position: | 174-296 |
| Cow position: | chr8:6224421-6224301 (view UCSC Genome Browser custom track) |
| Alignm length: | 124 |
| Alignm identity: | 101 |
| Alignm E-value: | 4e-24 |
| Alignm gaps (pig, cow): | 99, 79 |
| Conread position: | 174-296 |
| Cow position: | chr8:34060149-34060024 (view UCSC Genome Browser custom track) |
| Alignm length: | 127 |
| Alignm identity: | 100 |
| Alignm E-value: | 9e-22 |
| Alignm gaps (pig, cow): | 37, 84 |
| Conread position: | 174-296 |
| Cow position: | chr8:35580622-35580498 (view UCSC Genome Browser custom track) |
| Alignm length: | 126 |
| Alignm identity: | 98 |
| Alignm E-value: | 3e-21 |
| Alignm gaps (pig, cow): | 37, 85 |
| Conread position: | 174-296 |
| Cow position: | chr8:38572253-38572132 (view UCSC Genome Browser custom track) |
| Alignm length: | 123 |
| Alignm identity: | 99 |
| Alignm E-value: | 1e-25 |
| Alignm gaps (pig, cow): | 81, 0 |
| Conread position: | 174-296 |
| Cow position: | chr8:49305736-49305614 (view UCSC Genome Browser custom track) |
| Alignm length: | 126 |
| Alignm identity: | 102 |
| Alignm E-value: | 4e-23 |
| Alignm gaps (pig, cow): | 35, 17 |
| Conread position: | 174-306 |
| Cow position: | chr8:41219341-41219474 (view UCSC Genome Browser custom track) |
| Alignm length: | 136 |
| Alignm identity: | 107 |
| Alignm E-value: | 4e-24 |
| Alignm gaps (pig, cow): | 36, 85 |
| Conread position: | 174-312 |
| Cow position: | chr8:32198127-32197990 (view UCSC Genome Browser custom track) |
| Alignm length: | 141 |
| Alignm identity: | 109 |
| Alignm E-value: | 4e-23 |
| Alignm gaps (pig, cow): | 44, 81 |
| Conread position: | 174-312 |
| Cow position: | chr8:42794309-42794169 (view UCSC Genome Browser custom track) |
| Alignm length: | 143 |
| Alignm identity: | 111 |
| Alignm E-value: | 1e-23 |
| Alignm gaps (pig, cow): | 38, 84 |
| Conread position: | 174-315 |
| Cow position: | chr8:39174230-39174086 (view UCSC Genome Browser custom track) |
| Alignm length: | 147 |
| Alignm identity: | 118 |
| Alignm E-value: | 2e-27 |
| Alignm gaps (pig, cow): | 37, 86 |
| Conread position: | 174-323 |
| Cow position: | chr8:54147679-54147828 (view UCSC Genome Browser custom track) |
| Alignm length: | 153 |
| Alignm identity: | 118 |
| Alignm E-value: | 1e-25 |
| Alignm gaps (pig, cow): | 37, 85 |
| Conread position: | 174-324 |
| Cow position: | chr8:6531426-6531581 (view UCSC Genome Browser custom track) |
| Alignm length: | 157 |
| Alignm identity: | 118 |
| Alignm E-value: | 4e-23 |
| Alignm gaps (pig, cow): | 32, 84 |
| Conread position: | 174-324 |
| Cow position: | chr8:50709067-50709218 (view UCSC Genome Browser custom track) |
| Alignm length: | 155 |
| Alignm identity: | 116 |
| Alignm E-value: | 9e-22 |
| Alignm gaps (pig, cow): | 34, 81 |
| Conread position: | 174-332 |
| Cow position: | chr8:17167583-17167744 (view UCSC Genome Browser custom track) |
| Alignm length: | 164 |
| Alignm identity: | 128 |
| Alignm E-value: | 7e-29 |
| Alignm gaps (pig, cow): | 37, 84 |
| Conread position: | 174-351 |
| Cow position: | chr8:5468078-5467909 (view UCSC Genome Browser custom track) |
| Alignm length: | 181 |
| Alignm identity: | 135 |
| Alignm E-value: | 1e-23 |
| Alignm gaps (pig, cow): | 33, 84 |
| Conread position: | 174-351 |
| Cow position: | chr8:15182361-15182541 (view UCSC Genome Browser custom track) |
| Alignm length: | 182 |
| Alignm identity: | 134 |
| Alignm E-value: | 5e-27 |
| Alignm gaps (pig, cow): | 107, 91 |
| Conread position: | 174-351 |
| Cow position: | chr8:18171003-18170826 (view UCSC Genome Browser custom track) |
| Alignm length: | 182 |
| Alignm identity: | 131 |
| Alignm E-value: | 3e-22 |
| Alignm gaps (pig, cow): | 37, 85 |
| Conread position: | 174-351 |
| Cow position: | chr8:24905478-24905652 (view UCSC Genome Browser custom track) |
| Alignm length: | 181 |
| Alignm identity: | 139 |
| Alignm E-value: | 7e-30 |
| Alignm gaps (pig, cow): | 37, 83 |
| Conread position: | 174-351 |
| Cow position: | chr8:44847625-44847806 (view UCSC Genome Browser custom track) |
| Alignm length: | 185 |
| Alignm identity: | 134 |
| Alignm E-value: | 3e-22 |
| Alignm gaps (pig, cow): | 37, 85 |
| Conread position: | 174-351 |
| Cow position: | chr8:46235711-46235880 (view UCSC Genome Browser custom track) |
| Alignm length: | 178 |
| Alignm identity: | 136 |
| Alignm E-value: | 7e-30 |
| Alignm gaps (pig, cow): | 81, 0 |
| Conread position: | 174-351 |
| Cow position: | chr8:58876082-58876267 (view UCSC Genome Browser custom track) |
| Alignm length: | 188 |
| Alignm identity: | 141 |
| Alignm E-value: | 5e-26 |
| Alignm gaps (pig, cow): | 38, 86 |
| Conread position: | 174-403 |
| Cow position: | chr8:8986932-8986699 (view UCSC Genome Browser custom track) |
| Alignm length: | 239 |
| Alignm identity: | 165 |
| Alignm E-value: | 3e-22 |
| Alignm gaps (pig, cow): | 37, 80 |
| Conread position: | 174-430 |
| Cow position: | chr8:43153677-43153417 (view UCSC Genome Browser custom track) |
| Alignm length: | 264 |
| Alignm identity: | 192 |
| Alignm E-value: | 7e-40 |
| Alignm gaps (pig, cow): | 37, 84 |
| Conread position: | 174-443 |
| Cow position: | chr8:42112812-42112546 (view UCSC Genome Browser custom track) |
| Alignm length: | 275 |
| Alignm identity: | 192 |
| Alignm E-value: | 3e-32 |
| Alignm gaps (pig, cow): | 37, 82 |
| Conread position: | 174-456 |
| Cow position: | chr8:45232566-45232842 (view UCSC Genome Browser custom track) |
| Alignm length: | 285 |
| Alignm identity: | 188 |
| Alignm E-value: | 1e-25 |
| Alignm gaps (pig, cow): | 124, 38 |
| Conread position: | 175-293 |
| Cow position: | chr8:44449590-44449470 (view UCSC Genome Browser custom track) |
| Alignm length: | 122 |
| Alignm identity: | 99 |
| Alignm E-value: | 4e-24 |
| Alignm gaps (pig, cow): | 36, 113 |
| Conread position: | 175-295 |
| Cow position: | chr8:19616330-19616446 (view UCSC Genome Browser custom track) |
| Alignm length: | 121 |
| Alignm identity: | 96 |
| Alignm E-value: | 3e-21 |
| Alignm gaps (pig, cow): | 78, 0 |
| Conread position: | 175-298 |
| Cow position: | chr8:61677187-61677308 (view UCSC Genome Browser custom track) |
| Alignm length: | 127 |
| Alignm identity: | 103 |
| Alignm E-value: | 3e-22 |
| Alignm gaps (pig, cow): | 31, 63 |
| Conread position: | 175-325 |
| Cow position: | chr8:15569469-15569320 (view UCSC Genome Browser custom track) |
| Alignm length: | 155 |
| Alignm identity: | 117 |
| Alignm E-value: | 9e-21 |
| Alignm gaps (pig, cow): | 36, 81 |
| Conread position: | 175-369 |
| Cow position: | chr8:37672049-37672241 (view UCSC Genome Browser custom track) |
| Alignm length: | 200 |
| Alignm identity: | 152 |
| Alignm E-value: | 9e-32 |
| Alignm gaps (pig, cow): | 36, 81 |
| Conread position: | 175-403 |
| Cow position: | chr8:28987713-28987948 (view UCSC Genome Browser custom track) |
| Alignm length: | 240 |
| Alignm identity: | 169 |
| Alignm E-value: | 1e-24 |
| Alignm gaps (pig, cow): | 36, 83 |
| Conread position: | 175-427 |
| Cow position: | chr8:16653429-16653672 (view UCSC Genome Browser custom track) |
| Alignm length: | 259 |
| Alignm identity: | 184 |
| Alignm E-value: | 6e-28 |
| Alignm gaps (pig, cow): | 43, 65 |
| Conread position: | 176-296 |
| Cow position: | chr8:37559147-37559268 (view UCSC Genome Browser custom track) |
| Alignm length: | 124 |
| Alignm identity: | 99 |
| Alignm E-value: | 3e-22 |
| Alignm gaps (pig, cow): | 36, 75 |
| Conread position: | 176-296 |
| Cow position: | chr8:47410097-47410220 (view UCSC Genome Browser custom track) |
| Alignm length: | 125 |
| Alignm identity: | 98 |
| Alignm E-value: | 9e-21 |
| Alignm gaps (pig, cow): | 35, 80 |
| Conread position: | 176-351 |
| Cow position: | chr8:40032804-40032629 (view UCSC Genome Browser custom track) |
| Alignm length: | 179 |
| Alignm identity: | 131 |
| Alignm E-value: | 4e-25 |
| Alignm gaps (pig, cow): | 29, 79 |
| Conread position: | 177-295 |
| Cow position: | chr8:55716771-55716888 (view UCSC Genome Browser custom track) |
| Alignm length: | 119 |
| Alignm identity: | 92 |
| Alignm E-value: | 9e-21 |
| Alignm gaps (pig, cow): | 78, 0 |
| Conread position: | 179-296 |
| Cow position: | chr8:59766616-59766732 (view UCSC Genome Browser custom track) |
| Alignm length: | 118 |
| Alignm identity: | 93 |
| Alignm E-value: | 3e-22 |
| Alignm gaps (pig, cow): | 76, 0 |
| Conread position: | 184-363 |
| Cow position: | chr8:11927151-11927328 (view UCSC Genome Browser custom track) |
| Alignm length: | 184 |
| Alignm identity: | 135 |
| Alignm E-value: | 4e-24 |
| Alignm gaps (pig, cow): | 26, 74 |
| Conread position: | 196-296 |
| Cow position: | chr8:6160812-6160911 (view UCSC Genome Browser custom track) |
| Alignm length: | 102 |
| Alignm identity: | 86 |
| Alignm E-value: | 9e-22 |
| Alignm gaps (pig, cow): | 72, 24 |
| Conread position: | 197-340 |
| Cow position: | chr8:60585181-60585035 (view UCSC Genome Browser custom track) |
| Alignm length: | 149 |
| Alignm identity: | 118 |
| Alignm E-value: | 2e-26 |
| Alignm gaps (pig, cow): | 15, 61 |
| Conread position: | 205-337 |
| Cow position: | chr8:5546185-5546317 (view UCSC Genome Browser custom track) |
| Alignm length: | 135 |
| Alignm identity: | 103 |
| Alignm E-value: | 9e-21 |
| Alignm gaps (pig, cow): | 94, 50 |
| Conread position: | 219-421 |
| Cow position: | chr8:43017-43223 (view UCSC Genome Browser custom track) |
| Alignm length: | 212 |
| Alignm identity: | 152 |
| Alignm E-value: | 1e-24 |
| Alignm gaps (pig, cow): | 85, 37 |
Show alignments to all cow chromosomes.