Cow genome map
| Conread name: | Pig3-SRG8022L11 |
| Conread position: | 171-362 |
| Cow position: | chr9:9406023-9406207 (view UCSC Genome Browser custom track) |
| Alignm length: | 196 |
| Alignm identity: | 148 |
| Alignm E-value: | 6e-27 |
| Alignm gaps (pig, cow): | 37, 87 |
| Conread position: | 172-304 |
| Cow position: | chr9:34286828-34286695 (view UCSC Genome Browser custom track) |
| Alignm length: | 136 |
| Alignm identity: | 111 |
| Alignm E-value: | 6e-28 |
| Alignm gaps (pig, cow): | 37, 84 |
| Conread position: | 172-323 |
| Cow position: | chr9:6293624-6293473 (view UCSC Genome Browser custom track) |
| Alignm length: | 156 |
| Alignm identity: | 126 |
| Alignm E-value: | 8e-30 |
| Alignm gaps (pig, cow): | 39, 87 |
| Conread position: | 172-340 |
| Cow position: | chr9:17310536-17310698 (view UCSC Genome Browser custom track) |
| Alignm length: | 169 |
| Alignm identity: | 125 |
| Alignm E-value: | 1e-23 |
| Alignm gaps (pig, cow): | 81, 0 |
| Conread position: | 172-417 |
| Cow position: | chr9:8562849-8562606 (view UCSC Genome Browser custom track) |
| Alignm length: | 249 |
| Alignm identity: | 184 |
| Alignm E-value: | 2e-40 |
| Alignm gaps (pig, cow): | 36, 84 |
| Conread position: | 172-418 |
| Cow position: | chr9:26279140-26279371 (view UCSC Genome Browser custom track) |
| Alignm length: | 250 |
| Alignm identity: | 178 |
| Alignm E-value: | 2e-27 |
| Alignm gaps (pig, cow): | 39, 86 |
| Conread position: | 174-286 |
| Cow position: | chr9:5219143-5219259 (view UCSC Genome Browser custom track) |
| Alignm length: | 118 |
| Alignm identity: | 98 |
| Alignm E-value: | 1e-23 |
| Alignm gaps (pig, cow): | 26, 86 |
| Conread position: | 174-295 |
| Cow position: | chr9:3738197-3738320 (view UCSC Genome Browser custom track) |
| Alignm length: | 125 |
| Alignm identity: | 98 |
| Alignm E-value: | 1e-21 |
| Alignm gaps (pig, cow): | 37, 85 |
| Conread position: | 174-296 |
| Cow position: | chr9:36628145-36628022 (view UCSC Genome Browser custom track) |
| Alignm length: | 126 |
| Alignm identity: | 102 |
| Alignm E-value: | 4e-24 |
| Alignm gaps (pig, cow): | 32, 84 |
| Conread position: | 174-296 |
| Cow position: | chr9:42586529-42586652 (view UCSC Genome Browser custom track) |
| Alignm length: | 126 |
| Alignm identity: | 100 |
| Alignm E-value: | 3e-22 |
| Alignm gaps (pig, cow): | 36, 82 |
| Conread position: | 174-297 |
| Cow position: | chr9:29006584-29006460 (view UCSC Genome Browser custom track) |
| Alignm length: | 127 |
| Alignm identity: | 102 |
| Alignm E-value: | 1e-23 |
| Alignm gaps (pig, cow): | 37, 84 |
| Conread position: | 174-307 |
| Cow position: | chr9:34024726-34024593 (view UCSC Genome Browser custom track) |
| Alignm length: | 137 |
| Alignm identity: | 108 |
| Alignm E-value: | 1e-23 |
| Alignm gaps (pig, cow): | 37, 82 |
| Conread position: | 174-317 |
| Cow position: | chr9:34374897-34375040 (view UCSC Genome Browser custom track) |
| Alignm length: | 147 |
| Alignm identity: | 113 |
| Alignm E-value: | 1e-23 |
| Alignm gaps (pig, cow): | 38, 82 |
| Conread position: | 174-331 |
| Cow position: | chr9:39758545-39758391 (view UCSC Genome Browser custom track) |
| Alignm length: | 161 |
| Alignm identity: | 126 |
| Alignm E-value: | 6e-27 |
| Alignm gaps (pig, cow): | 37, 84 |
| Conread position: | 174-351 |
| Cow position: | chr9:19067809-19067635 (view UCSC Genome Browser custom track) |
| Alignm length: | 181 |
| Alignm identity: | 139 |
| Alignm E-value: | 2e-29 |
| Alignm gaps (pig, cow): | 33, 76 |
| Conread position: | 174-351 |
| Cow position: | chr9:55354638-55354458 (view UCSC Genome Browser custom track) |
| Alignm length: | 184 |
| Alignm identity: | 146 |
| Alignm E-value: | 1e-34 |
| Alignm gaps (pig, cow): | 37, 84 |
| Conread position: | 174-363 |
| Cow position: | chr9:9686387-9686568 (view UCSC Genome Browser custom track) |
| Alignm length: | 193 |
| Alignm identity: | 140 |
| Alignm E-value: | 3e-22 |
| Alignm gaps (pig, cow): | 37, 24 |
| Conread position: | 174-371 |
| Cow position: | chr9:33119861-33120060 (view UCSC Genome Browser custom track) |
| Alignm length: | 202 |
| Alignm identity: | 145 |
| Alignm E-value: | 6e-28 |
| Alignm gaps (pig, cow): | 36, 84 |
| Conread position: | 174-373 |
| Cow position: | chr9:41785237-41785037 (view UCSC Genome Browser custom track) |
| Alignm length: | 205 |
| Alignm identity: | 147 |
| Alignm E-value: | 2e-26 |
| Alignm gaps (pig, cow): | 37, 83 |
| Conread position: | 174-399 |
| Cow position: | chr9:39011442-39011652 (view UCSC Genome Browser custom track) |
| Alignm length: | 230 |
| Alignm identity: | 168 |
| Alignm E-value: | 5e-26 |
| Alignm gaps (pig, cow): | 38, 84 |
| Conread position: | 174-400 |
| Cow position: | chr9:52267731-52267947 (view UCSC Genome Browser custom track) |
| Alignm length: | 230 |
| Alignm identity: | 166 |
| Alignm E-value: | 2e-27 |
| Alignm gaps (pig, cow): | 184, 81 |
| Conread position: | 174-411 |
| Cow position: | chr9:9552117-9551877 (view UCSC Genome Browser custom track) |
| Alignm length: | 244 |
| Alignm identity: | 165 |
| Alignm E-value: | 4e-24 |
| Alignm gaps (pig, cow): | 34, 82 |
| Conread position: | 174-416 |
| Cow position: | chr9:18342760-18342520 (view UCSC Genome Browser custom track) |
| Alignm length: | 249 |
| Alignm identity: | 171 |
| Alignm E-value: | 4e-24 |
| Alignm gaps (pig, cow): | 37, 84 |
| Conread position: | 174-421 |
| Cow position: | chr9:4267955-4268211 (view UCSC Genome Browser custom track) |
| Alignm length: | 259 |
| Alignm identity: | 184 |
| Alignm E-value: | 3e-31 |
| Alignm gaps (pig, cow): | 33, 84 |
| Conread position: | 175-292 |
| Cow position: | chr9:34079072-34079188 (view UCSC Genome Browser custom track) |
| Alignm length: | 118 |
| Alignm identity: | 94 |
| Alignm E-value: | 4e-23 |
| Alignm gaps (pig, cow): | 80, 0 |
| Conread position: | 175-295 |
| Cow position: | chr9:21460128-21460247 (view UCSC Genome Browser custom track) |
| Alignm length: | 121 |
| Alignm identity: | 94 |
| Alignm E-value: | 1e-21 |
| Alignm gaps (pig, cow): | 80, 0 |
| Conread position: | 175-295 |
| Cow position: | chr9:41728284-41728163 (view UCSC Genome Browser custom track) |
| Alignm length: | 125 |
| Alignm identity: | 101 |
| Alignm E-value: | 3e-22 |
| Alignm gaps (pig, cow): | 31, 54 |
| Conread position: | 175-296 |
| Cow position: | chr9:43202360-43202237 (view UCSC Genome Browser custom track) |
| Alignm length: | 125 |
| Alignm identity: | 100 |
| Alignm E-value: | 1e-23 |
| Alignm gaps (pig, cow): | 36, 84 |
| Conread position: | 176-295 |
| Cow position: | chr9:19718315-19718435 (view UCSC Genome Browser custom track) |
| Alignm length: | 123 |
| Alignm identity: | 99 |
| Alignm E-value: | 1e-22 |
| Alignm gaps (pig, cow): | 32, 80 |
| Conread position: | 176-305 |
| Cow position: | chr9:51620467-51620341 (view UCSC Genome Browser custom track) |
| Alignm length: | 130 |
| Alignm identity: | 100 |
| Alignm E-value: | 3e-21 |
| Alignm gaps (pig, cow): | 79, 0 |
| Conread position: | 176-374 |
| Cow position: | chr9:4341134-4341330 (view UCSC Genome Browser custom track) |
| Alignm length: | 204 |
| Alignm identity: | 145 |
| Alignm E-value: | 3e-22 |
| Alignm gaps (pig, cow): | 33, 82 |
| Conread position: | 177-297 |
| Cow position: | chr9:24079326-24079204 (view UCSC Genome Browser custom track) |
| Alignm length: | 125 |
| Alignm identity: | 99 |
| Alignm E-value: | 9e-21 |
| Alignm gaps (pig, cow): | 34, 52 |
| Conread position: | 177-312 |
| Cow position: | chr9:26277852-26277718 (view UCSC Genome Browser custom track) |
| Alignm length: | 138 |
| Alignm identity: | 107 |
| Alignm E-value: | 1e-22 |
| Alignm gaps (pig, cow): | 34, 25 |
| Conread position: | 178-324 |
| Cow position: | chr9:9654288-9654430 (view UCSC Genome Browser custom track) |
| Alignm length: | 147 |
| Alignm identity: | 116 |
| Alignm E-value: | 2e-27 |
| Alignm gaps (pig, cow): | 24, 0 |
| Conread position: | 178-351 |
| Cow position: | chr9:53496731-53496897 (view UCSC Genome Browser custom track) |
| Alignm length: | 174 |
| Alignm identity: | 134 |
| Alignm E-value: | 8e-30 |
| Alignm gaps (pig, cow): | 77, 0 |
| Conread position: | 180-306 |
| Cow position: | chr9:5186846-5186969 (view UCSC Genome Browser custom track) |
| Alignm length: | 127 |
| Alignm identity: | 100 |
| Alignm E-value: | 1e-22 |
| Alignm gaps (pig, cow): | 75, 0 |
| Conread position: | 185-296 |
| Cow position: | chr9:23403834-23403721 (view UCSC Genome Browser custom track) |
| Alignm length: | 115 |
| Alignm identity: | 94 |
| Alignm E-value: | 1e-22 |
| Alignm gaps (pig, cow): | 26, 71 |
| Conread position: | 196-323 |
| Cow position: | chr9:30123931-30123807 (view UCSC Genome Browser custom track) |
| Alignm length: | 128 |
| Alignm identity: | 100 |
| Alignm E-value: | 3e-22 |
| Alignm gaps (pig, cow): | 59, 0 |
| Conread position: | 197-349 |
| Cow position: | chr9:56773079-56772929 (view UCSC Genome Browser custom track) |
| Alignm length: | 155 |
| Alignm identity: | 116 |
| Alignm E-value: | 3e-22 |
| Alignm gaps (pig, cow): | 14, 66 |
| Conread position: | 204-350 |
| Cow position: | chr9:34265089-34264949 (view UCSC Genome Browser custom track) |
| Alignm length: | 147 |
| Alignm identity: | 117 |
| Alignm E-value: | 2e-27 |
| Alignm gaps (pig, cow): | 51, 0 |
| Conread position: | 205-351 |
| Cow position: | chr9:23840401-23840539 (view UCSC Genome Browser custom track) |
| Alignm length: | 147 |
| Alignm identity: | 114 |
| Alignm E-value: | 1e-23 |
| Alignm gaps (pig, cow): | 48, 0 |
| Conread position: | 208-328 |
| Cow position: | chr9:46190132-46190014 (view UCSC Genome Browser custom track) |
| Alignm length: | 122 |
| Alignm identity: | 97 |
| Alignm E-value: | 3e-21 |
| Alignm gaps (pig, cow): | 109, 48 |
Show alignments to all cow chromosomes.