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Cow genome map

           
Conread name:
           
Pig3-SRG8023H08
        

               
Conread position:
               
2-195
               

               
Cow position:
               
chr13:12521498-12521691 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
198
               

               
Alignm identity:
               
139
               

               
Alignm E-value:
               
4e-23
               

               
Alignm gaps (pig, cow):
               
100, 71
               

               
Conread position:
               
2-220
               

               
Cow position:
               
chr13:60436597-60436824 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
228
               

               
Alignm identity:
               
178
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
146, 0
               

               
Conread position:
               
2-370
               

               
Cow position:
               
chr13:17613632-17613252 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
385
               

               
Alignm identity:
               
292
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
146, 262
               

               
Conread position:
               
2-377
               

               
Cow position:
               
chr13:12614548-12614158 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
395
               

               
Alignm identity:
               
269
               

               
Alignm E-value:
               
3.9937e-43
               

               
Alignm gaps (pig, cow):
               
31, 287
               

               
Conread position:
               
2-384
               

               
Cow position:
               
chr13:18835472-18835102 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
387
               

               
Alignm identity:
               
275
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
150, 157
               

               
Conread position:
               
2-385
               

               
Cow position:
               
chr13:50690106-50690501 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
402
               

               
Alignm identity:
               
288
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
143, 271
               

               
Conread position:
               
2-396
               

               
Cow position:
               
chr13:9907022-9906617 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
415
               

               
Alignm identity:
               
284
               

               
Alignm E-value:
               
9.80909e-45
               

               
Alignm gaps (pig, cow):
               
143, 26
               

               
Conread position:
               
2-424
               

               
Cow position:
               
chr13:37483984-37484422 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
440
               

               
Alignm identity:
               
308
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
143, 278
               

               
Conread position:
               
2-430
               

               
Cow position:
               
chr13:21276141-21275710 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
443
               

               
Alignm identity:
               
314
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
151, 214
               

               
Conread position:
               
2-432
               

               
Cow position:
               
chr13:45353328-45352880 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
453
               

               
Alignm identity:
               
320
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
151, 75
               

               
Conread position:
               
3-184
               

               
Cow position:
               
chr13:24373690-24373496 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
195
               

               
Alignm identity:
               
143
               

               
Alignm E-value:
               
2e-25
               

               
Alignm gaps (pig, cow):
               
34, 0
               

               
Conread position:
               
3-220
               

               
Cow position:
               
chr13:3649088-3648861 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
228
               

               
Alignm identity:
               
162
               

               
Alignm E-value:
               
3e-30
               

               
Alignm gaps (pig, cow):
               
142, 0
               

               
Conread position:
               
3-220
               

               
Cow position:
               
chr13:51856352-51856583 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
234
               

               
Alignm identity:
               
175
               

               
Alignm E-value:
               
1e-34
               

               
Alignm gaps (pig, cow):
               
115, 89
               

               
Conread position:
               
3-226
               

               
Cow position:
               
chr13:11834198-11834420 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
230
               

               
Alignm identity:
               
161
               

               
Alignm E-value:
               
1e-23
               

               
Alignm gaps (pig, cow):
               
32, 73
               

               
Conread position:
               
3-228
               

               
Cow position:
               
chr13:6189346-6189562 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
226
               

               
Alignm identity:
               
162
               

               
Alignm E-value:
               
3e-31
               

               
Alignm gaps (pig, cow):
               
54, 0
               

               
Conread position:
               
3-228
               

               
Cow position:
               
chr13:21402510-21402742 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
236
               

               
Alignm identity:
               
169
               

               
Alignm E-value:
               
3e-30
               

               
Alignm gaps (pig, cow):
               
139, 210
               

               
Conread position:
               
3-228
               

               
Cow position:
               
chr13:51528161-51528397 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
237
               

               
Alignm identity:
               
180
               

               
Alignm E-value:
               
8e-40
               

               
Alignm gaps (pig, cow):
               
134, 0
               

               
Conread position:
               
3-230
               

               
Cow position:
               
chr13:3015885-3016119 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
238
               

               
Alignm identity:
               
164
               

               
Alignm E-value:
               
1e-23
               

               
Alignm gaps (pig, cow):
               
111, 35
               

               
Conread position:
               
3-239
               

               
Cow position:
               
chr13:26382946-26383197 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
252
               

               
Alignm identity:
               
188
               

               
Alignm E-value:
               
6e-38
               

               
Alignm gaps (pig, cow):
               
143, 0
               

               
Conread position:
               
3-242
               

               
Cow position:
               
chr13:14927522-14927275 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
250
               

               
Alignm identity:
               
191
               

               
Alignm E-value:
               
5.60519e-45
               

               
Alignm gaps (pig, cow):
               
142, 54
               

               
Conread position:
               
3-249
               

               
Cow position:
               
chr13:20683231-20682975 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
258
               

               
Alignm identity:
               
189
               

               
Alignm E-value:
               
2e-38
               

               
Alignm gaps (pig, cow):
               
115, 133
               

               
Conread position:
               
3-257
               

               
Cow position:
               
chr13:20820553-20820811 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
260
               

               
Alignm identity:
               
188
               

               
Alignm E-value:
               
8.99998e-41
               

               
Alignm gaps (pig, cow):
               
25, 74
               

               
Conread position:
               
3-258
               

               
Cow position:
               
chr13:36948885-36949151 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
267
               

               
Alignm identity:
               
195
               

               
Alignm E-value:
               
3.00018e-42
               

               
Alignm gaps (pig, cow):
               
142, 0
               

               
Conread position:
               
3-260
               

               
Cow position:
               
chr13:311717-311450 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
268
               

               
Alignm identity:
               
195
               

               
Alignm E-value:
               
9.99967e-42
               

               
Alignm gaps (pig, cow):
               
46, 0
               

               
Conread position:
               
3-260
               

               
Cow position:
               
chr13:15446329-15446061 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
271
               

               
Alignm identity:
               
198
               

               
Alignm E-value:
               
3e-40
               

               
Alignm gaps (pig, cow):
               
123, 15
               

               
Conread position:
               
3-260
               

               
Cow position:
               
chr13:21155206-21155474 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
271
               

               
Alignm identity:
               
205
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
142, 39
               

               
Conread position:
               
3-260
               

               
Cow position:
               
chr13:32017238-32017506 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
270
               

               
Alignm identity:
               
211
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
131, 71
               

               
Conread position:
               
3-263
               

               
Cow position:
               
chr13:17158579-17158858 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
281
               

               
Alignm identity:
               
206
               

               
Alignm E-value:
               
7e-39
               

               
Alignm gaps (pig, cow):
               
45, 206
               

               
Conread position:
               
3-269
               

               
Cow position:
               
chr13:25434844-25435110 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
270
               

               
Alignm identity:
               
211
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
235, 150
               

               
Conread position:
               
3-269
               

               
Cow position:
               
chr13:61170439-61170711 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
282
               

               
Alignm identity:
               
213
               

               
Alignm E-value:
               
3.9937e-43
               

               
Alignm gaps (pig, cow):
               
128, 39
               

               
Conread position:
               
3-270
               

               
Cow position:
               
chr13:55843769-55843489 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
281
               

               
Alignm identity:
               
199
               

               
Alignm E-value:
               
2e-36
               

               
Alignm gaps (pig, cow):
               
87, 0
               

               
Conread position:
               
3-274
               

               
Cow position:
               
chr13:37945935-37946201 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
277
               

               
Alignm identity:
               
210
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
182, 56
               

               
Conread position:
               
3-274
               

               
Cow position:
               
chr13:43119593-43119317 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
283
               

               
Alignm identity:
               
198
               

               
Alignm E-value:
               
1e-31
               

               
Alignm gaps (pig, cow):
               
142, 54
               

               
Conread position:
               
3-294
               

               
Cow position:
               
chr13:25248859-25249166 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
312
               

               
Alignm identity:
               
231
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
142, 81
               

               
Conread position:
               
3-296
               

               
Cow position:
               
chr13:6759505-6759813 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
310
               

               
Alignm identity:
               
212
               

               
Alignm E-value:
               
3e-32
               

               
Alignm gaps (pig, cow):
               
142, 94
               

               
Conread position:
               
3-296
               

               
Cow position:
               
chr13:47313188-47312901 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
300
               

               
Alignm identity:
               
214
               

               
Alignm E-value:
               
2e-38
               

               
Alignm gaps (pig, cow):
               
236, 67
               

               
Conread position:
               
3-298
               

               
Cow position:
               
chr13:3003729-3003425 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
310
               

               
Alignm identity:
               
221
               

               
Alignm E-value:
               
3e-40
               

               
Alignm gaps (pig, cow):
               
142, 25
               

               
Conread position:
               
3-298
               

               
Cow position:
               
chr13:13266086-13265794 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
299
               

               
Alignm identity:
               
213
               

               
Alignm E-value:
               
4.06377e-44
               

               
Alignm gaps (pig, cow):
               
154, 71
               

               
Conread position:
               
3-323
               

               
Cow position:
               
chr13:12682258-12682583 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
332
               

               
Alignm identity:
               
233
               

               
Alignm E-value:
               
3.9937e-43
               

               
Alignm gaps (pig, cow):
               
142, 30
               

               
Conread position:
               
3-323
               

               
Cow position:
               
chr13:18215714-18215407 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
329
               

               
Alignm identity:
               
236
               

               
Alignm E-value:
               
3e-40
               

               
Alignm gaps (pig, cow):
               
71, 194
               

               
Conread position:
               
3-335
               

               
Cow position:
               
chr13:19178558-19178223 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
343
               

               
Alignm identity:
               
250
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
146, 31
               

               
Conread position:
               
3-337
               

               
Cow position:
               
chr13:20440316-20440632 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
338
               

               
Alignm identity:
               
238
               

               
Alignm E-value:
               
8e-40
               

               
Alignm gaps (pig, cow):
               
42, 82
               

               
Conread position:
               
3-358
               

               
Cow position:
               
chr13:21039318-21039675 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
370
               

               
Alignm identity:
               
258
               

               
Alignm E-value:
               
8.99998e-41
               

               
Alignm gaps (pig, cow):
               
27, 33
               

               
Conread position:
               
3-369
               

               
Cow position:
               
chr13:889899-890256 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
369
               

               
Alignm identity:
               
252
               

               
Alignm E-value:
               
1.4013e-45
               

               
Alignm gaps (pig, cow):
               
313, 21
               

               
Conread position:
               
3-370
               

               
Cow position:
               
chr13:56686716-56686346 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
378
               

               
Alignm identity:
               
265
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
43, 133
               

               
Conread position:
               
3-373
               

               
Cow position:
               
chr13:25062700-25062322 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
389
               

               
Alignm identity:
               
265
               

               
Alignm E-value:
               
3e-40
               

               
Alignm gaps (pig, cow):
               
32, 245
               

               
Conread position:
               
3-379
               

               
Cow position:
               
chr13:22085475-22085843 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
384
               

               
Alignm identity:
               
270
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
232, 25
               

               
Conread position:
               
3-384
               

               
Cow position:
               
chr13:13261300-13260901 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
403
               

               
Alignm identity:
               
269
               

               
Alignm E-value:
               
2e-37
               

               
Alignm gaps (pig, cow):
               
31, 281
               

               
Conread position:
               
3-384
               

               
Cow position:
               
chr13:43762458-43762066 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
397
               

               
Alignm identity:
               
271
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
35, 270
               

               
Conread position:
               
3-388
               

               
Cow position:
               
chr13:46324504-46324894 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
399
               

               
Alignm identity:
               
272
               

               
Alignm E-value:
               
9.94922e-44
               

               
Alignm gaps (pig, cow):
               
36, 22
               

               
Conread position:
               
3-390
               

               
Cow position:
               
chr13:23269928-23270313 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
393
               

               
Alignm identity:
               
277
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
150, 264
               

               
Conread position:
               
3-392
               

               
Cow position:
               
chr13:1155423-1155813 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
402
               

               
Alignm identity:
               
288
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
145, 206
               

               
Conread position:
               
3-393
               

               
Cow position:
               
chr13:25531505-25531901 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
405
               

               
Alignm identity:
               
291
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
42, 62
               

               
Conread position:
               
3-393
               

               
Cow position:
               
chr13:41918881-41919267 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
403
               

               
Alignm identity:
               
278
               

               
Alignm E-value:
               
9.80909e-45
               

               
Alignm gaps (pig, cow):
               
146, 60
               

               
Conread position:
               
3-396
               

               
Cow position:
               
chr13:15872734-15872327 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
409
               

               
Alignm identity:
               
291
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
142, 276
               

               
Conread position:
               
3-396
               

               
Cow position:
               
chr13:17622569-17622174 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
408
               

               
Alignm identity:
               
292
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
133, 116
               

               
Conread position:
               
3-396
               

               
Cow position:
               
chr13:20893357-20893754 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
406
               

               
Alignm identity:
               
281
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
65, 133
               

               
Conread position:
               
3-399
               

               
Cow position:
               
chr13:42860288-42860687 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
414
               

               
Alignm identity:
               
288
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
142, 31
               

               
Conread position:
               
3-400
               

               
Cow position:
               
chr13:15167101-15166699 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
414
               

               
Alignm identity:
               
288
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
139, 30
               

               
Conread position:
               
3-400
               

               
Cow position:
               
chr13:34035653-34035249 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
416
               

               
Alignm identity:
               
295
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
134, 247
               

               
Conread position:
               
3-400
               

               
Cow position:
               
chr13:60429794-60430196 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
406
               

               
Alignm identity:
               
289
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
154, 71
               

               
Conread position:
               
3-404
               

               
Cow position:
               
chr13:33875947-33875553 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
410
               

               
Alignm identity:
               
292
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
146, 185
               

               
Conread position:
               
3-406
               

               
Cow position:
               
chr13:11820862-11820474 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
408
               

               
Alignm identity:
               
283
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
297, 56
               

               
Conread position:
               
3-409
               

               
Cow position:
               
chr13:7663144-7663549 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
414
               

               
Alignm identity:
               
285
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
65, 79
               

               
Conread position:
               
3-413
               

               
Cow position:
               
chr13:21176038-21176451 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
426
               

               
Alignm identity:
               
286
               

               
Alignm E-value:
               
2e-39
               

               
Alignm gaps (pig, cow):
               
45, 14
               

               
Conread position:
               
3-416
               

               
Cow position:
               
chr13:17820975-17821405 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
437
               

               
Alignm identity:
               
298
               

               
Alignm E-value:
               
1.4013e-45
               

               
Alignm gaps (pig, cow):
               
127, 71
               

               
Conread position:
               
3-419
               

               
Cow position:
               
chr13:9142567-9142143 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
431
               

               
Alignm identity:
               
299
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
181, 69
               

               
Conread position:
               
3-422
               

               
Cow position:
               
chr13:24754169-24753746 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
435
               

               
Alignm identity:
               
309
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
136, 270
               

               
Conread position:
               
3-424
               

               
Cow position:
               
chr13:8362461-8362886 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
439
               

               
Alignm identity:
               
311
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
133, 243
               

               
Conread position:
               
3-426
               

               
Cow position:
               
chr13:13089308-13088885 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
441
               

               
Alignm identity:
               
313
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
141, 71
               

               
Conread position:
               
3-426
               

               
Cow position:
               
chr13:19882754-19883181 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
439
               

               
Alignm identity:
               
291
               

               
Alignm E-value:
               
2e-39
               

               
Alignm gaps (pig, cow):
               
135, 25
               

               
Conread position:
               
3-426
               

               
Cow position:
               
chr13:25817798-25817382 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
430
               

               
Alignm identity:
               
302
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
232, 154
               

               
Conread position:
               
3-426
               

               
Cow position:
               
chr13:38329918-38329471 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
448
               

               
Alignm identity:
               
312
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
51, 0
               

               
Conread position:
               
3-426
               

               
Cow position:
               
chr13:61976680-61977105 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
439
               

               
Alignm identity:
               
299
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
142, 81
               

               
Conread position:
               
3-428
               

               
Cow position:
               
chr13:6974450-6974015 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
444
               

               
Alignm identity:
               
315
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
70, 131
               

               
Conread position:
               
3-428
               

               
Cow position:
               
chr13:26479932-26480351 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
436
               

               
Alignm identity:
               
295
               

               
Alignm E-value:
               
5.60519e-45
               

               
Alignm gaps (pig, cow):
               
139, 25
               

               
Conread position:
               
3-428
               

               
Cow position:
               
chr13:36771137-36771568 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
439
               

               
Alignm identity:
               
314
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
57, 132
               

               
Conread position:
               
3-428
               

               
Cow position:
               
chr13:41807060-41806625 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
444
               

               
Alignm identity:
               
308
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
141, 71
               

               
Conread position:
               
3-428
               

               
Cow position:
               
chr13:51821603-51822021 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
438
               

               
Alignm identity:
               
301
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
74, 33
               

               
Conread position:
               
3-429
               

               
Cow position:
               
chr13:13321065-13320649 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
436
               

               
Alignm identity:
               
285
               

               
Alignm E-value:
               
1e-34
               

               
Alignm gaps (pig, cow):
               
71, 102
               

               
Conread position:
               
3-438
               

               
Cow position:
               
chr13:17977619-17977197 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
443
               

               
Alignm identity:
               
289
               

               
Alignm E-value:
               
6e-37
               

               
Alignm gaps (pig, cow):
               
30, 77
               

               
Conread position:
               
3-469
               

               
Cow position:
               
chr13:46182060-46181607 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
483
               

               
Alignm identity:
               
332
               

               
Alignm E-value:
               
4.06377e-44
               

               
Alignm gaps (pig, cow):
               
150, 30
               

               
Conread position:
               
3-504
               

               
Cow position:
               
chr13:1042671-1043188 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
524
               

               
Alignm identity:
               
368
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
132, 277
               

               
Conread position:
               
3-516
               

               
Cow position:
               
chr13:40943528-40943016 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
531
               

               
Alignm identity:
               
353
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
142, 71
               

               
Conread position:
               
3-519
               

               
Cow position:
               
chr13:6086616-6087122 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
533
               

               
Alignm identity:
               
350
               

               
Alignm E-value:
               
9.99967e-42
               

               
Alignm gaps (pig, cow):
               
139, 71
               

               
Conread position:
               
3-520
               

               
Cow position:
               
chr13:52585738-52586271 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
543
               

               
Alignm identity:
               
356
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
141, 41
               

               
Conread position:
               
3-522
               

               
Cow position:
               
chr13:37382096-37381563 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
544
               

               
Alignm identity:
               
374
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
71, 277
               

               
Conread position:
               
3-523
               

               
Cow position:
               
chr13:51941014-51940497 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
528
               

               
Alignm identity:
               
350
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
149, 70
               

               
Conread position:
               
3-524
               

               
Cow position:
               
chr13:8609266-8609783 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
541
               

               
Alignm identity:
               
360
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
44, 57
               

               
Conread position:
               
3-524
               

               
Cow position:
               
chr13:20683838-20684364 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
539
               

               
Alignm identity:
               
360
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
146, 78
               

               
Conread position:
               
3-524
               

               
Cow position:
               
chr13:38562229-38561715 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
536
               

               
Alignm identity:
               
362
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
140, 84
               

               
Conread position:
               
3-525
               

               
Cow position:
               
chr13:52057823-52057326 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
532
               

               
Alignm identity:
               
352
               

               
Alignm E-value:
               
9.94922e-44
               

               
Alignm gaps (pig, cow):
               
77, 25
               

               
Conread position:
               
3-537
               

               
Cow position:
               
chr13:185789-185279 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
540
               

               
Alignm identity:
               
348
               

               
Alignm E-value:
               
8.99998e-41
               

               
Alignm gaps (pig, cow):
               
342, 56
               

               
Conread position:
               
3-557
               

               
Cow position:
               
chr13:60974360-60973818 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
562
               

               
Alignm identity:
               
380
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
154, 70
               

               
Conread position:
               
4-184
               

               
Cow position:
               
chr13:62018806-62018997 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
192
               

               
Alignm identity:
               
137
               

               
Alignm E-value:
               
4e-22
               

               
Alignm gaps (pig, cow):
               
39, 0
               

               
Conread position:
               
4-270
               

               
Cow position:
               
chr13:59687584-59687871 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
289
               

               
Alignm identity:
               
196
               

               
Alignm E-value:
               
4e-23
               

               
Alignm gaps (pig, cow):
               
44, 268
               

               
Conread position:
               
4-414
               

               
Cow position:
               
chr13:57493900-57494320 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
428
               

               
Alignm identity:
               
291
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
149, 70
               

               
Conread position:
               
4-428
               

               
Cow position:
               
chr13:38283700-38284126 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
439
               

               
Alignm identity:
               
300
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
141, 204
               

               
Conread position:
               
5-276
               

               
Cow position:
               
chr13:37516851-37517131 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
283
               

               
Alignm identity:
               
227
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
43, 266
               

               
Conread position:
               
5-290
               

               
Cow position:
               
chr13:8824549-8824260 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
291
               

               
Alignm identity:
               
212
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
41, 278
               

               
Conread position:
               
5-290
               

               
Cow position:
               
chr13:23266012-23265720 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
297
               

               
Alignm identity:
               
210
               

               
Alignm E-value:
               
7e-39
               

               
Alignm gaps (pig, cow):
               
183, 127
               

               
Conread position:
               
5-295
               

               
Cow position:
               
chr13:15172126-15172423 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
304
               

               
Alignm identity:
               
228
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
135, 39
               

               
Conread position:
               
5-297
               

               
Cow position:
               
chr13:20863735-20864027 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
304
               

               
Alignm identity:
               
220
               

               
Alignm E-value:
               
7e-39
               

               
Alignm gaps (pig, cow):
               
21, 69
               

               
Conread position:
               
5-337
               

               
Cow position:
               
chr13:6153496-6153835 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
345
               

               
Alignm identity:
               
253
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
139, 272
               

               
Conread position:
               
5-426
               

               
Cow position:
               
chr13:11260533-11260130 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
426
               

               
Alignm identity:
               
291
               

               
Alignm E-value:
               
5.60519e-45
               

               
Alignm gaps (pig, cow):
               
175, 25
               

               
Conread position:
               
5-427
               

               
Cow position:
               
chr13:32283406-32282982 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
436
               

               
Alignm identity:
               
291
               

               
Alignm E-value:
               
1.00053e-42
               

               
Alignm gaps (pig, cow):
               
140, 21
               

               
Conread position:
               
5-428
               

               
Cow position:
               
chr13:971613-972044 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
434
               

               
Alignm identity:
               
298
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
11, 253
               

               
Conread position:
               
5-430
               

               
Cow position:
               
chr13:46516349-46515911 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
452
               

               
Alignm identity:
               
308
               

               
Alignm E-value:
               
3.9937e-43
               

               
Alignm gaps (pig, cow):
               
24, 69
               

               
Conread position:
               
6-396
               

               
Cow position:
               
chr13:12574916-12574520 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
408
               

               
Alignm identity:
               
284
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
146, 213
               

               
Conread position:
               
7-229
               

               
Cow position:
               
chr13:37947734-37947950 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
227
               

               
Alignm identity:
               
178
               

               
Alignm E-value:
               
1.00053e-42
               

               
Alignm gaps (pig, cow):
               
154, 52
               

               
Conread position:
               
7-244
               

               
Cow position:
               
chr13:12605973-12606214 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
246
               

               
Alignm identity:
               
177
               

               
Alignm E-value:
               
4e-34
               

               
Alignm gaps (pig, cow):
               
136, 52
               

               
Conread position:
               
7-275
               

               
Cow position:
               
chr13:8838716-8838984 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
276
               

               
Alignm identity:
               
198
               

               
Alignm E-value:
               
6e-37
               

               
Alignm gaps (pig, cow):
               
142, 21
               

               
Conread position:
               
7-304
               

               
Cow position:
               
chr13:37980370-37980663 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
304
               

               
Alignm identity:
               
222
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
178, 56
               

               
Conread position:
               
7-383
               

               
Cow position:
               
chr13:18852353-18851982 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
382
               

               
Alignm identity:
               
260
               

               
Alignm E-value:
               
4.06377e-44
               

               
Alignm gaps (pig, cow):
               
138, 21
               

               
Conread position:
               
7-396
               

               
Cow position:
               
chr13:30799003-30798608 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
404
               

               
Alignm identity:
               
279
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
37, 121
               

               
Conread position:
               
7-426
               

               
Cow position:
               
chr13:152223-151818 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
428
               

               
Alignm identity:
               
291
               

               
Alignm E-value:
               
4.06377e-44
               

               
Alignm gaps (pig, cow):
               
127, 57
               

               
Conread position:
               
8-183
               

               
Cow position:
               
chr13:12244736-12244917 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
182
               

               
Alignm identity:
               
136
               

               
Alignm E-value:
               
3e-29
               

               
Alignm gaps (pig, cow):
               
142, 0
               

               
Conread position:
               
8-198
               

               
Cow position:
               
chr13:15591853-15592048 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
198
               

               
Alignm identity:
               
147
               

               
Alignm E-value:
               
3e-30
               

               
Alignm gaps (pig, cow):
               
144, 89
               

               
Conread position:
               
8-228
               

               
Cow position:
               
chr13:35525934-35526156 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
224
               

               
Alignm identity:
               
169
               

               
Alignm E-value:
               
3.00018e-42
               

               
Alignm gaps (pig, cow):
               
72, 163
               

               
Conread position:
               
8-251
               

               
Cow position:
               
chr13:38485107-38484864 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
250
               

               
Alignm identity:
               
190
               

               
Alignm E-value:
               
9.94922e-44
               

               
Alignm gaps (pig, cow):
               
127, 20
               

               
Conread position:
               
8-263
               

               
Cow position:
               
chr13:30651455-30651195 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
265
               

               
Alignm identity:
               
211
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
135, 114
               

               
Conread position:
               
8-266
               

               
Cow position:
               
chr13:16015095-16014827 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
273
               

               
Alignm identity:
               
202
               

               
Alignm E-value:
               
3.00018e-42
               

               
Alignm gaps (pig, cow):
               
40, 151
               

               
Conread position:
               
8-267
               

               
Cow position:
               
chr13:15162389-15162639 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
261
               

               
Alignm identity:
               
193
               

               
Alignm E-value:
               
1.00053e-42
               

               
Alignm gaps (pig, cow):
               
181, 69
               

               
Conread position:
               
8-269
               

               
Cow position:
               
chr13:60690439-60690718 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
281
               

               
Alignm identity:
               
220
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
60, 52
               

               
Conread position:
               
8-270
               

               
Cow position:
               
chr13:16833810-16834067 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
272
               

               
Alignm identity:
               
191
               

               
Alignm E-value:
               
2e-28
               

               
Alignm gaps (pig, cow):
               
150, 65
               

               
Conread position:
               
8-274
               

               
Cow position:
               
chr13:562857-563136 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
281
               

               
Alignm identity:
               
204
               

               
Alignm E-value:
               
8.99998e-41
               

               
Alignm gaps (pig, cow):
               
58, 271
               

               
Conread position:
               
8-274
               

               
Cow position:
               
chr13:19426418-19426691 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
274
               

               
Alignm identity:
               
189
               

               
Alignm E-value:
               
2e-35
               

               
Alignm gaps (pig, cow):
               
147, 0
               

               
Conread position:
               
8-278
               

               
Cow position:
               
chr13:21235409-21235684 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
282
               

               
Alignm identity:
               
210
               

               
Alignm E-value:
               
3.9937e-43
               

               
Alignm gaps (pig, cow):
               
139, 30
               

               
Conread position:
               
8-278
               

               
Cow position:
               
chr13:54237625-54237358 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
277
               

               
Alignm identity:
               
202
               

               
Alignm E-value:
               
2e-38
               

               
Alignm gaps (pig, cow):
               
34, 19
               

               
Conread position:
               
8-293
               

               
Cow position:
               
chr13:49283062-49283361 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
305
               

               
Alignm identity:
               
207
               

               
Alignm E-value:
               
1e-24
               

               
Alignm gaps (pig, cow):
               
35, 85
               

               
Conread position:
               
8-319
               

               
Cow position:
               
chr13:5091381-5091702 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
326
               

               
Alignm identity:
               
245
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
134, 270
               

               
Conread position:
               
8-359
               

               
Cow position:
               
chr13:34375535-34375182 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
364
               

               
Alignm identity:
               
252
               

               
Alignm E-value:
               
8.99998e-41
               

               
Alignm gaps (pig, cow):
               
177, 57
               

               
Conread position:
               
8-370
               

               
Cow position:
               
chr13:34941377-34941738 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
375
               

               
Alignm identity:
               
271
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
145, 73
               

               
Conread position:
               
8-375
               

               
Cow position:
               
chr13:42114301-42113926 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
383
               

               
Alignm identity:
               
275
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
140, 257
               

               
Conread position:
               
8-385
               

               
Cow position:
               
chr13:19138717-19138337 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
390
               

               
Alignm identity:
               
279
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
152, 219
               

               
Conread position:
               
8-393
               

               
Cow position:
               
chr13:39952134-39952525 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
400
               

               
Alignm identity:
               
257
               

               
Alignm E-value:
               
8e-29
               

               
Alignm gaps (pig, cow):
               
129, 45
               

               
Conread position:
               
8-401
               

               
Cow position:
               
chr13:34281960-34281559 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
409
               

               
Alignm identity:
               
281
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
137, 257
               

               
Conread position:
               
8-421
               

               
Cow position:
               
chr13:20563278-20562853 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
430
               

               
Alignm identity:
               
308
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
50, 269
               

               
Conread position:
               
8-427
               

               
Cow position:
               
chr13:6616468-6616905 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
443
               

               
Alignm identity:
               
311
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
137, 196
               

               
Conread position:
               
8-428
               

               
Cow position:
               
chr13:16292823-16292392 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
440
               

               
Alignm identity:
               
298
               

               
Alignm E-value:
               
4.06377e-44
               

               
Alignm gaps (pig, cow):
               
137, 20
               

               
Conread position:
               
8-505
               

               
Cow position:
               
chr13:52284189-52283689 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
512
               

               
Alignm identity:
               
339
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
137, 194
               

               
Conread position:
               
11-263
               

               
Cow position:
               
chr13:2774395-2774144 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
260
               

               
Alignm identity:
               
192
               

               
Alignm E-value:
               
7e-39
               

               
Alignm gaps (pig, cow):
               
65, 17
               

               
Conread position:
               
11-316
               

               
Cow position:
               
chr13:3701709-3701408 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
312
               

               
Alignm identity:
               
223
               

               
Alignm E-value:
               
3.00018e-42
               

               
Alignm gaps (pig, cow):
               
136, 63
               

               
Conread position:
               
11-392
               

               
Cow position:
               
chr13:61047483-61047104 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
396
               

               
Alignm identity:
               
283
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
122, 90
               

               
Conread position:
               
11-396
               

               
Cow position:
               
chr13:1231927-1231526 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
406
               

               
Alignm identity:
               
276
               

               
Alignm E-value:
               
9.99967e-42
               

               
Alignm gaps (pig, cow):
               
33, 74
               

               
Conread position:
               
11-396
               

               
Cow position:
               
chr13:43138952-43139328 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
398
               

               
Alignm identity:
               
288
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
135, 70
               

               
Conread position:
               
12-207
               

               
Cow position:
               
chr13:48629266-48629068 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
200
               

               
Alignm identity:
               
159
               

               
Alignm E-value:
               
1.00053e-42
               

               
Alignm gaps (pig, cow):
               
143, 133
               

               
Conread position:
               
12-361
               

               
Cow position:
               
chr13:13306382-13306017 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
371
               

               
Alignm identity:
               
262
               

               
Alignm E-value:
               
1.4013e-45
               

               
Alignm gaps (pig, cow):
               
89, 274
               

               
Conread position:
               
12-380
               

               
Cow position:
               
chr13:43151383-43151002 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
385
               

               
Alignm identity:
               
252
               

               
Alignm E-value:
               
1e-33
               

               
Alignm gaps (pig, cow):
               
133, 233
               

               
Conread position:
               
14-271
               

               
Cow position:
               
chr13:6079145-6079407 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
266
               

               
Alignm identity:
               
194
               

               
Alignm E-value:
               
3e-40
               

               
Alignm gaps (pig, cow):
               
139, 247
               

               
Conread position:
               
14-278
               

               
Cow position:
               
chr13:1636275-1636014 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
268
               

               
Alignm identity:
               
192
               

               
Alignm E-value:
               
6e-38
               

               
Alignm gaps (pig, cow):
               
60, 85
               

               
Conread position:
               
14-283
               

               
Cow position:
               
chr13:24539766-24539484 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
287
               

               
Alignm identity:
               
201
               

               
Alignm E-value:
               
3e-29
               

               
Alignm gaps (pig, cow):
               
131, 21
               

               
Conread position:
               
14-391
               

               
Cow position:
               
chr13:1170742-1170353 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
393
               

               
Alignm identity:
               
263
               

               
Alignm E-value:
               
2e-38
               

               
Alignm gaps (pig, cow):
               
138, 262
               

               
Conread position:
               
14-426
               

               
Cow position:
               
chr13:37521460-37521887 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
436
               

               
Alignm identity:
               
280
               

               
Alignm E-value:
               
2e-27
               

               
Alignm gaps (pig, cow):
               
60, 39
               

               
Conread position:
               
14-428
               

               
Cow position:
               
chr13:27524988-27525407 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
432
               

               
Alignm identity:
               
298
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
128, 60
               

               
Conread position:
               
14-428
               

               
Cow position:
               
chr13:34263107-34263516 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
423
               

               
Alignm identity:
               
290
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
141, 30
               

               
Conread position:
               
14-486
               

               
Cow position:
               
chr13:45726153-45725688 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
480
               

               
Alignm identity:
               
321
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
172, 60
               

               
Conread position:
               
15-224
               

               
Cow position:
               
chr13:46525171-46525388 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
220
               

               
Alignm identity:
               
165
               

               
Alignm E-value:
               
1e-34
               

               
Alignm gaps (pig, cow):
               
114, 16
               

               
Conread position:
               
15-256
               

               
Cow position:
               
chr13:6606747-6606999 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
254
               

               
Alignm identity:
               
193
               

               
Alignm E-value:
               
9.80909e-45
               

               
Alignm gaps (pig, cow):
               
58, 189
               

               
Conread position:
               
15-259
               

               
Cow position:
               
chr13:62618081-62617847 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
250
               

               
Alignm identity:
               
172
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
29, 62
               

               
Conread position:
               
15-275
               

               
Cow position:
               
chr13:47599641-47599387 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
261
               

               
Alignm identity:
               
154
               

               
Alignm E-value:
               
1e-32
               

               
Alignm gaps (pig, cow):
               
61, 0
               

               
Conread position:
               
15-380
               

               
Cow position:
               
chr13:47007466-47007817 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
370
               

               
Alignm identity:
               
260
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
329, 14
               

               
Conread position:
               
16-265
               

               
Cow position:
               
chr13:4553071-4552818 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
258
               

               
Alignm identity:
               
191
               

               
Alignm E-value:
               
9.99967e-42
               

               
Alignm gaps (pig, cow):
               
137, 95
               

               
Conread position:
               
16-270
               

               
Cow position:
               
chr13:28683630-28683374 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
258
               

               
Alignm identity:
               
190
               

               
Alignm E-value:
               
1.4013e-45
               

               
Alignm gaps (pig, cow):
               
139, 58
               

               
Conread position:
               
16-384
               

               
Cow position:
               
chr13:31814139-31813774 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
376
               

               
Alignm identity:
               
268
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
57, 38
               

               
Conread position:
               
16-427
               

               
Cow position:
               
chr13:12670173-12670597 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
429
               

               
Alignm identity:
               
297
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
129, 99
               

               
Conread position:
               
16-427
               

               
Cow position:
               
chr13:21107402-21106995 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
426
               

               
Alignm identity:
               
286
               

               
Alignm E-value:
               
2e-38
               

               
Alignm gaps (pig, cow):
               
21, 84
               

               
Conread position:
               
18-372
               

               
Cow position:
               
chr13:18244125-18243772 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
364
               

               
Alignm identity:
               
269
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
168, 17
               

               
Conread position:
               
18-396
               

               
Cow position:
               
chr13:16247922-16247534 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
395
               

               
Alignm identity:
               
281
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
137, 28
               

               
Conread position:
               
19-229
               

               
Cow position:
               
chr13:57323716-57323507 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
220
               

               
Alignm identity:
               
160
               

               
Alignm E-value:
               
2e-25
               

               
Alignm gaps (pig, cow):
               
130, 34
               

               
Conread position:
               
19-508
               

               
Cow position:
               
chr13:38277868-38278395 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
528
               

               
Alignm identity:
               
363
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
134, 0
               

               
Conread position:
               
21-290
               

               
Cow position:
               
chr13:55295359-55295629 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
276
               

               
Alignm identity:
               
210
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
114, 53
               

               
Conread position:
               
21-525
               

               
Cow position:
               
chr13:17800339-17799840 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
514
               

               
Alignm identity:
               
353
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
43, 38
               

               
Conread position:
               
22-263
               

               
Cow position:
               
chr13:46311768-46312006 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
244
               

               
Alignm identity:
               
178
               

               
Alignm E-value:
               
6e-38
               

               
Alignm gaps (pig, cow):
               
26, 64
               

               
Conread position:
               
22-334
               

               
Cow position:
               
chr13:54702456-54702138 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
325
               

               
Alignm identity:
               
234
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
123, 65
               

               
Conread position:
               
22-427
               

               
Cow position:
               
chr13:15041206-15041617 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
421
               

               
Alignm identity:
               
290
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
127, 250
               

               
Conread position:
               
22-428
               

               
Cow position:
               
chr13:18166996-18166585 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
417
               

               
Alignm identity:
               
298
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
131, 254
               

               
Conread position:
               
23-400
               

               
Cow position:
               
chr13:44626645-44626251 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
400
               

               
Alignm identity:
               
274
               

               
Alignm E-value:
               
4.06377e-44
               

               
Alignm gaps (pig, cow):
               
120, 267
               

               
Conread position:
               
25-401
               

               
Cow position:
               
chr13:56154898-56155271 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
383
               

               
Alignm identity:
               
255
               

               
Alignm E-value:
               
8e-40
               

               
Alignm gaps (pig, cow):
               
113, 209
               

               
Conread position:
               
26-237
               

               
Cow position:
               
chr13:14544384-14544162 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
223
               

               
Alignm identity:
               
174
               

               
Alignm E-value:
               
3.9937e-43
               

               
Alignm gaps (pig, cow):
               
119, 0
               

               
Conread position:
               
26-275
               

               
Cow position:
               
chr13:22115967-22115711 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
261
               

               
Alignm identity:
               
200
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
19, 50
               

               
Conread position:
               
26-284
               

               
Cow position:
               
chr13:24155804-24155536 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
272
               

               
Alignm identity:
               
202
               

               
Alignm E-value:
               
1.00053e-42
               

               
Alignm gaps (pig, cow):
               
19, 50
               

               
Conread position:
               
26-385
               

               
Cow position:
               
chr13:15234172-15233823 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
368
               

               
Alignm identity:
               
252
               

               
Alignm E-value:
               
2e-38
               

               
Alignm gaps (pig, cow):
               
128, 47
               

               
Conread position:
               
26-427
               

               
Cow position:
               
chr13:17021458-17021871 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
424
               

               
Alignm identity:
               
283
               

               
Alignm E-value:
               
2e-36
               

               
Alignm gaps (pig, cow):
               
101, 259
               

               
Conread position:
               
26-427
               

               
Cow position:
               
chr13:60508854-60509266 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
418
               

               
Alignm identity:
               
287
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
89, 205
               

               
Conread position:
               
27-281
               

               
Cow position:
               
chr13:54381674-54381936 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
266
               

               
Alignm identity:
               
197
               

               
Alignm E-value:
               
3.00018e-42
               

               
Alignm gaps (pig, cow):
               
121, 47
               

               
Conread position:
               
28-274
               

               
Cow position:
               
chr13:39948159-39948410 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
255
               

               
Alignm identity:
               
174
               

               
Alignm E-value:
               
6e-27
               

               
Alignm gaps (pig, cow):
               
115, 147
               

               
Conread position:
               
28-297
               

               
Cow position:
               
chr13:4866720-4866982 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
279
               

               
Alignm identity:
               
198
               

               
Alignm E-value:
               
3e-29
               

               
Alignm gaps (pig, cow):
               
40, 73
               

               
Conread position:
               
28-396
               

               
Cow position:
               
chr13:57002999-57002612 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
393
               

               
Alignm identity:
               
265
               

               
Alignm E-value:
               
2e-35
               

               
Alignm gaps (pig, cow):
               
38, 245
               

               
Conread position:
               
29-524
               

               
Cow position:
               
chr13:9265559-9266061 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
519
               

               
Alignm identity:
               
351
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
92, 234
               

               
Conread position:
               
30-269
               

               
Cow position:
               
chr13:11061243-11060995 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
253
               

               
Alignm identity:
               
186
               

               
Alignm E-value:
               
1e-34
               

               
Alignm gaps (pig, cow):
               
5, 31
               

               
Conread position:
               
30-397
               

               
Cow position:
               
chr13:20649726-20650102 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
383
               

               
Alignm identity:
               
276
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
5, 28
               

               
Conread position:
               
30-538
               

               
Cow position:
               
chr13:17970776-17971270 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
517
               

               
Alignm identity:
               
343
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
5, 45
               

               
Conread position:
               
34-270
               

               
Cow position:
               
chr13:41253867-41253632 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
242
               

               
Alignm identity:
               
174
               

               
Alignm E-value:
               
3e-32
               

               
Alignm gaps (pig, cow):
               
119, 19
               

               
Conread position:
               
34-505
               

               
Cow position:
               
chr13:37069601-37069124 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
486
               

               
Alignm identity:
               
326
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
119, 8
               

               
Conread position:
               
35-259
               

               
Cow position:
               
chr13:26261541-26261778 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
238
               

               
Alignm identity:
               
176
               

               
Alignm E-value:
               
2e-36
               

               
Alignm gaps (pig, cow):
               
110, 0
               

               
Conread position:
               
35-262
               

               
Cow position:
               
chr13:60330004-60329771 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
236
               

               
Alignm identity:
               
167
               

               
Alignm E-value:
               
2e-28
               

               
Alignm gaps (pig, cow):
               
13, 41
               

               
Conread position:
               
35-269
               

               
Cow position:
               
chr13:52922341-52922103 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
244
               

               
Alignm identity:
               
177
               

               
Alignm E-value:
               
4e-33
               

               
Alignm gaps (pig, cow):
               
119, 81
               

               
Conread position:
               
35-277
               

               
Cow position:
               
chr13:54095057-54094814 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
249
               

               
Alignm identity:
               
182
               

               
Alignm E-value:
               
5e-36
               

               
Alignm gaps (pig, cow):
               
21, 16
               

               
Conread position:
               
35-319
               

               
Cow position:
               
chr13:33517671-33517958 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
294
               

               
Alignm identity:
               
220
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
118, 156
               

               
Conread position:
               
35-384
               

               
Cow position:
               
chr13:48037873-48037521 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
360
               

               
Alignm identity:
               
254
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
99, 230
               

               
Conread position:
               
35-510
               

               
Cow position:
               
chr13:33352112-33352564 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
482
               

               
Alignm identity:
               
315
               

               
Alignm E-value:
               
6e-37
               

               
Alignm gaps (pig, cow):
               
10, 174
               

               
Conread position:
               
35-513
               

               
Cow position:
               
chr13:2414278-2413801 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
490
               

               
Alignm identity:
               
329
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
122, 37
               

               
Conread position:
               
35-531
               

               
Cow position:
               
chr13:45022955-45023442 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
512
               

               
Alignm identity:
               
358
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
40, 30
               

               
Conread position:
               
36-199
               

               
Cow position:
               
chr13:10859710-10859879 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
171
               

               
Alignm identity:
               
123
               

               
Alignm E-value:
               
1e-20
               

               
Alignm gaps (pig, cow):
               
6, 84
               

               
Conread position:
               
36-221
               

               
Cow position:
               
chr13:47356882-47356695 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
190
               

               
Alignm identity:
               
139
               

               
Alignm E-value:
               
6e-27
               

               
Alignm gaps (pig, cow):
               
30, 126
               

               
Conread position:
               
36-237
               

               
Cow position:
               
chr13:19556004-19555803 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
206
               

               
Alignm identity:
               
153
               

               
Alignm E-value:
               
4e-33
               

               
Alignm gaps (pig, cow):
               
119, 171
               

               
Conread position:
               
36-260
               

               
Cow position:
               
chr13:22780197-22779981 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
226
               

               
Alignm identity:
               
164
               

               
Alignm E-value:
               
1e-31
               

               
Alignm gaps (pig, cow):
               
194, 38
               

               
Conread position:
               
36-262
               

               
Cow position:
               
chr13:48251740-48251968 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
231
               

               
Alignm identity:
               
177
               

               
Alignm E-value:
               
4.06377e-44
               

               
Alignm gaps (pig, cow):
               
145, 118
               

               
Conread position:
               
36-263
               

               
Cow position:
               
chr13:5713546-5713317 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
232
               

               
Alignm identity:
               
172
               

               
Alignm E-value:
               
8e-40
               

               
Alignm gaps (pig, cow):
               
109, 127
               

               
Conread position:
               
36-269
               

               
Cow position:
               
chr13:43629528-43629766 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
244
               

               
Alignm identity:
               
181
               

               
Alignm E-value:
               
5e-36
               

               
Alignm gaps (pig, cow):
               
144, 17
               

               
Conread position:
               
36-275
               

               
Cow position:
               
chr13:21904911-21904669 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
247
               

               
Alignm identity:
               
176
               

               
Alignm E-value:
               
1e-32
               

               
Alignm gaps (pig, cow):
               
122, 27
               

               
Conread position:
               
36-277
               

               
Cow position:
               
chr13:16343938-16343689 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
252
               

               
Alignm identity:
               
173
               

               
Alignm E-value:
               
6e-27
               

               
Alignm gaps (pig, cow):
               
109, 65
               

               
Conread position:
               
36-278
               

               
Cow position:
               
chr13:22775060-22775293 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
245
               

               
Alignm identity:
               
176
               

               
Alignm E-value:
               
9e-31
               

               
Alignm gaps (pig, cow):
               
116, 38
               

               
Conread position:
               
36-280
               

               
Cow position:
               
chr13:25261553-25261809 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
259
               

               
Alignm identity:
               
195
               

               
Alignm E-value:
               
3.00004e-41
               

               
Alignm gaps (pig, cow):
               
12, 185
               

               
Conread position:
               
36-337
               

               
Cow position:
               
chr13:30693953-30693663 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
304
               

               
Alignm identity:
               
216
               

               
Alignm E-value:
               
3e-40
               

               
Alignm gaps (pig, cow):
               
108, 196
               

               
Conread position:
               
36-370
               

               
Cow position:
               
chr13:11954861-11955205 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
352
               

               
Alignm identity:
               
239
               

               
Alignm E-value:
               
4e-34
               

               
Alignm gaps (pig, cow):
               
12, 42
               

               
Conread position:
               
36-375
               

               
Cow position:
               
chr13:33631372-33631036 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
350
               

               
Alignm identity:
               
226
               

               
Alignm E-value:
               
3e-21
               

               
Alignm gaps (pig, cow):
               
86, 154
               

               
Conread position:
               
36-384
               

               
Cow position:
               
chr13:11460877-11460531 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
365
               

               
Alignm identity:
               
251
               

               
Alignm E-value:
               
1e-33
               

               
Alignm gaps (pig, cow):
               
10, 38
               

               
Conread position:
               
36-421
               

               
Cow position:
               
chr13:46736456-46736077 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
397
               

               
Alignm identity:
               
261
               

               
Alignm E-value:
               
3e-29
               

               
Alignm gaps (pig, cow):
               
13, 90
               

               
Conread position:
               
36-428
               

               
Cow position:
               
chr13:14063276-14063668 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
404
               

               
Alignm identity:
               
265
               

               
Alignm E-value:
               
4e-34
               

               
Alignm gaps (pig, cow):
               
109, 39
               

               
Conread position:
               
36-428
               

               
Cow position:
               
chr13:23479281-23478883 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
408
               

               
Alignm identity:
               
276
               

               
Alignm E-value:
               
9.99967e-42
               

               
Alignm gaps (pig, cow):
               
109, 94
               

               
Conread position:
               
36-500
               

               
Cow position:
               
chr13:23166845-23167310 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
478
               

               
Alignm identity:
               
342
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
117, 40
               

               
Conread position:
               
37-278
               

               
Cow position:
               
chr13:57475169-57475413 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
250
               

               
Alignm identity:
               
179
               

               
Alignm E-value:
               
3e-32
               

               
Alignm gaps (pig, cow):
               
28, 5
               

               
Conread position:
               
38-227
               

               
Cow position:
               
chr13:37985501-37985704 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
205
               

               
Alignm identity:
               
150
               

               
Alignm E-value:
               
1e-24
               

               
Alignm gaps (pig, cow):
               
98, 36
               

               
Conread position:
               
38-229
               

               
Cow position:
               
chr13:23960556-23960760 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
205
               

               
Alignm identity:
               
153
               

               
Alignm E-value:
               
8e-30
               

               
Alignm gaps (pig, cow):
               
60, 0
               

               
Conread position:
               
38-229
               

               
Cow position:
               
chr13:40722460-40722655 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
198
               

               
Alignm identity:
               
149
               

               
Alignm E-value:
               
3e-32
               

               
Alignm gaps (pig, cow):
               
117, 57
               

               
Conread position:
               
38-396
               

               
Cow position:
               
chr13:25927042-25926676 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
371
               

               
Alignm identity:
               
260
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
115, 212
               

               
Conread position:
               
38-421
               

               
Cow position:
               
chr13:56148789-56148381 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
417
               

               
Alignm identity:
               
287
               

               
Alignm E-value:
               
5e-35
               

               
Alignm gaps (pig, cow):
               
106, 36
               

               
Conread position:
               
38-428
               

               
Cow position:
               
chr13:42200868-42200473 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
406
               

               
Alignm identity:
               
279
               

               
Alignm E-value:
               
5.60519e-45
               

               
Alignm gaps (pig, cow):
               
107, 36
               

               
Conread position:
               
39-269
               

               
Cow position:
               
chr13:47863450-47863689 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
240
               

               
Alignm identity:
               
171
               

               
Alignm E-value:
               
1e-32
               

               
Alignm gaps (pig, cow):
               
56, 0
               

               
Conread position:
               
40-428
               

               
Cow position:
               
chr13:23856463-23856064 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
406
               

               
Alignm identity:
               
280
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
105, 63
               

               
Conread position:
               
41-524
               

               
Cow position:
               
chr13:14783346-14782886 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
488
               

               
Alignm identity:
               
308
               

               
Alignm E-value:
               
2e-28
               

               
Alignm gaps (pig, cow):
               
145, 18
               

               
Conread position:
               
41-529
               

               
Cow position:
               
chr13:13176896-13176378 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
525
               

               
Alignm identity:
               
347
               

               
Alignm E-value:
               
1.00053e-42
               

               
Alignm gaps (pig, cow):
               
114, 91
               

               
Conread position:
               
42-237
               

               
Cow position:
               
chr13:22025457-22025664 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
210
               

               
Alignm identity:
               
159
               

               
Alignm E-value:
               
3e-31
               

               
Alignm gaps (pig, cow):
               
58, 11
               

               
Conread position:
               
42-263
               

               
Cow position:
               
chr13:34299398-34299612 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
226
               

               
Alignm identity:
               
163
               

               
Alignm E-value:
               
7e-28
               

               
Alignm gaps (pig, cow):
               
92, 31
               

               
Conread position:
               
42-264
               

               
Cow position:
               
chr13:44323149-44322920 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
232
               

               
Alignm identity:
               
173
               

               
Alignm E-value:
               
6e-38
               

               
Alignm gaps (pig, cow):
               
32, 211
               

               
Conread position:
               
42-274
               

               
Cow position:
               
chr13:37521134-37521373 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
241
               

               
Alignm identity:
               
160
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
111, 219
               

               
Conread position:
               
42-391
               

               
Cow position:
               
chr13:8201239-8201592 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
363
               

               
Alignm identity:
               
254
               

               
Alignm E-value:
               
9.94922e-44
               

               
Alignm gaps (pig, cow):
               
38, 30
               

               
Conread position:
               
42-393
               

               
Cow position:
               
chr13:60599696-60600042 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
361
               

               
Alignm identity:
               
251
               

               
Alignm E-value:
               
3.00018e-42
               

               
Alignm gaps (pig, cow):
               
107, 198
               

               
Conread position:
               
42-396
               

               
Cow position:
               
chr13:15884768-15885137 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
375
               

               
Alignm identity:
               
259
               

               
Alignm E-value:
               
9.99967e-42
               

               
Alignm gaps (pig, cow):
               
94, 32
               

               
Conread position:
               
43-198
               

               
Cow position:
               
chr13:29122597-29122752 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
156
               

               
Alignm identity:
               
115
               

               
Alignm E-value:
               
5e-26
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
43-260
               

               
Cow position:
               
chr13:15974855-15974632 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
224
               

               
Alignm identity:
               
168
               

               
Alignm E-value:
               
8e-40
               

               
Alignm gaps (pig, cow):
               
114, 0
               

               
Conread position:
               
43-263
               

               
Cow position:
               
chr13:53566841-53566612 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
233
               

               
Alignm identity:
               
172
               

               
Alignm E-value:
               
4e-33
               

               
Alignm gaps (pig, cow):
               
102, 31
               

               
Conread position:
               
43-270
               

               
Cow position:
               
chr13:12283080-12282844 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
240
               

               
Alignm identity:
               
175
               

               
Alignm E-value:
               
1e-33
               

               
Alignm gaps (pig, cow):
               
102, 30
               

               
Conread position:
               
43-278
               

               
Cow position:
               
chr13:38012606-38012358 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
249
               

               
Alignm identity:
               
186
               

               
Alignm E-value:
               
8.99998e-41
               

               
Alignm gaps (pig, cow):
               
106, 0
               

               
Conread position:
               
43-430
               

               
Cow position:
               
chr13:15622052-15621660 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
400
               

               
Alignm identity:
               
258
               

               
Alignm E-value:
               
3e-30
               

               
Alignm gaps (pig, cow):
               
84, 60
               

               
Conread position:
               
44-228
               

               
Cow position:
               
chr13:21241848-21242038 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
192
               

               
Alignm identity:
               
143
               

               
Alignm E-value:
               
3e-29
               

               
Alignm gaps (pig, cow):
               
93, 172
               

               
Conread position:
               
44-270
               

               
Cow position:
               
chr13:16024832-16024601 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
238
               

               
Alignm identity:
               
179
               

               
Alignm E-value:
               
2e-35
               

               
Alignm gaps (pig, cow):
               
110, 30
               

               
Conread position:
               
44-350
               

               
Cow position:
               
chr13:20880682-20880994 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
315
               

               
Alignm identity:
               
216
               

               
Alignm E-value:
               
2e-38
               

               
Alignm gaps (pig, cow):
               
30, 226
               

               
Conread position:
               
44-427
               

               
Cow position:
               
chr13:9587340-9587727 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
397
               

               
Alignm identity:
               
268
               

               
Alignm E-value:
               
9.99967e-42
               

               
Alignm gaps (pig, cow):
               
100, 30
               

               
Conread position:
               
45-278
               

               
Cow position:
               
chr13:43194418-43194180 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
240
               

               
Alignm identity:
               
168
               

               
Alignm E-value:
               
3e-31
               

               
Alignm gaps (pig, cow):
               
97, 221
               

               
Conread position:
               
45-322
               

               
Cow position:
               
chr13:24376733-24376457 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
286
               

               
Alignm identity:
               
202
               

               
Alignm E-value:
               
1e-34
               

               
Alignm gaps (pig, cow):
               
100, 192
               

               
Conread position:
               
45-425
               

               
Cow position:
               
chr13:55673962-55674352 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
398
               

               
Alignm identity:
               
272
               

               
Alignm E-value:
               
3.9937e-43
               

               
Alignm gaps (pig, cow):
               
100, 219
               

               
Conread position:
               
45-523
               

               
Cow position:
               
chr13:41154803-41155267 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
486
               

               
Alignm identity:
               
317
               

               
Alignm E-value:
               
6e-37
               

               
Alignm gaps (pig, cow):
               
76, 80
               

               
Conread position:
               
45-538
               

               
Cow position:
               
chr13:20705960-20706452 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
511
               

               
Alignm identity:
               
338
               

               
Alignm E-value:
               
9.94922e-44
               

               
Alignm gaps (pig, cow):
               
100, 29
               

               
Conread position:
               
46-275
               

               
Cow position:
               
chr13:53536064-53536298 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
239
               

               
Alignm identity:
               
172
               

               
Alignm E-value:
               
3e-31
               

               
Alignm gaps (pig, cow):
               
101, 28
               

               
Conread position:
               
46-529
               

               
Cow position:
               
chr13:7076498-7076022 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
497
               

               
Alignm identity:
               
335
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
84, 176
               

               
Conread position:
               
47-260
               

               
Cow position:
               
chr13:2462991-2463213 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
226
               

               
Alignm identity:
               
171
               

               
Alignm E-value:
               
5e-36
               

               
Alignm gaps (pig, cow):
               
102, 6
               

               
Conread position:
               
47-524
               

               
Cow position:
               
chr13:10924665-10925159 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
504
               

               
Alignm identity:
               
330
               

               
Alignm E-value:
               
3e-40
               

               
Alignm gaps (pig, cow):
               
33, 53
               

               
Conread position:
               
48-217
               

               
Cow position:
               
chr13:27985189-27985364 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
176
               

               
Alignm identity:
               
126
               

               
Alignm E-value:
               
4e-22
               

               
Alignm gaps (pig, cow):
               
105, 0
               

               
Conread position:
               
48-226
               

               
Cow position:
               
chr13:54331259-54331071 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
189
               

               
Alignm identity:
               
138
               

               
Alignm E-value:
               
5e-25
               

               
Alignm gaps (pig, cow):
               
97, 0
               

               
Conread position:
               
48-278
               

               
Cow position:
               
chr13:20041717-20041965 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
249
               

               
Alignm identity:
               
190
               

               
Alignm E-value:
               
9.99967e-42
               

               
Alignm gaps (pig, cow):
               
29, 0
               

               
Conread position:
               
50-384
               

               
Cow position:
               
chr13:37818524-37818853 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
342
               

               
Alignm identity:
               
224
               

               
Alignm E-value:
               
6e-27
               

               
Alignm gaps (pig, cow):
               
107, 13
               

               
Conread position:
               
50-421
               

               
Cow position:
               
chr13:24586285-24585908 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
387
               

               
Alignm identity:
               
262
               

               
Alignm E-value:
               
6e-38
               

               
Alignm gaps (pig, cow):
               
65, 168
               

               
Conread position:
               
50-431
               

               
Cow position:
               
chr13:6060770-6061155 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
395
               

               
Alignm identity:
               
267
               

               
Alignm E-value:
               
8.99998e-41
               

               
Alignm gaps (pig, cow):
               
91, 24
               

               
Conread position:
               
52-248
               

               
Cow position:
               
chr13:18551684-18551476 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
209
               

               
Alignm identity:
               
157
               

               
Alignm E-value:
               
1e-32
               

               
Alignm gaps (pig, cow):
               
93, 0
               

               
Conread position:
               
53-262
               

               
Cow position:
               
chr13:34556097-34556318 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
223
               

               
Alignm identity:
               
163
               

               
Alignm E-value:
               
8e-30
               

               
Alignm gaps (pig, cow):
               
15, 213
               

               
Conread position:
               
53-265
               

               
Cow position:
               
chr13:48944895-48944685 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
217
               

               
Alignm identity:
               
162
               

               
Alignm E-value:
               
1e-34
               

               
Alignm gaps (pig, cow):
               
127, 5
               

               
Conread position:
               
53-276
               

               
Cow position:
               
chr13:17816006-17815772 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
235
               

               
Alignm identity:
               
166
               

               
Alignm E-value:
               
3e-29
               

               
Alignm gaps (pig, cow):
               
85, 0
               

               
Conread position:
               
53-427
               

               
Cow position:
               
chr13:25547358-25547728 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
382
               

               
Alignm identity:
               
253
               

               
Alignm E-value:
               
2e-36
               

               
Alignm gaps (pig, cow):
               
185, 100
               

               
Conread position:
               
54-274
               

               
Cow position:
               
chr13:20536733-20536509 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
228
               

               
Alignm identity:
               
165
               

               
Alignm E-value:
               
1e-31
               

               
Alignm gaps (pig, cow):
               
91, 7
               

               
Conread position:
               
54-424
               

               
Cow position:
               
chr13:24369819-24369439 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
390
               

               
Alignm identity:
               
272
               

               
Alignm E-value:
               
3.9937e-43
               

               
Alignm gaps (pig, cow):
               
25, 172
               

               
Conread position:
               
55-263
               

               
Cow position:
               
chr13:47963968-47964178 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
215
               

               
Alignm identity:
               
163
               

               
Alignm E-value:
               
5e-36
               

               
Alignm gaps (pig, cow):
               
90, 59
               

               
Conread position:
               
56-421
               

               
Cow position:
               
chr13:43184640-43185020 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
383
               

               
Alignm identity:
               
259
               

               
Alignm E-value:
               
2e-39
               

               
Alignm gaps (pig, cow):
               
18, 119
               

               
Conread position:
               
57-263
               

               
Cow position:
               
chr13:9884999-9884785 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
219
               

               
Alignm identity:
               
158
               

               
Alignm E-value:
               
5e-26
               

               
Alignm gaps (pig, cow):
               
79, 156
               

               
Conread position:
               
57-275
               

               
Cow position:
               
chr13:11767810-11768038 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
230
               

               
Alignm identity:
               
161
               

               
Alignm E-value:
               
1e-24
               

               
Alignm gaps (pig, cow):
               
21, 149
               

               
Conread position:
               
57-430
               

               
Cow position:
               
chr13:20497883-20497499 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
392
               

               
Alignm identity:
               
257
               

               
Alignm E-value:
               
3e-29
               

               
Alignm gaps (pig, cow):
               
88, 73
               

               
Conread position:
               
57-487
               

               
Cow position:
               
chr13:19033778-19033354 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
439
               

               
Alignm identity:
               
292
               

               
Alignm E-value:
               
3.00018e-42
               

               
Alignm gaps (pig, cow):
               
14, 78
               

               
Conread position:
               
58-396
               

               
Cow position:
               
chr13:12207273-12206933 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
349
               

               
Alignm identity:
               
230
               

               
Alignm E-value:
               
2e-28
               

               
Alignm gaps (pig, cow):
               
91, 218
               

               
Conread position:
               
59-384
               

               
Cow position:
               
chr13:43480290-43479958 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
339
               

               
Alignm identity:
               
229
               

               
Alignm E-value:
               
4e-34
               

               
Alignm gaps (pig, cow):
               
86, 212
               

               
Conread position:
               
61-424
               

               
Cow position:
               
chr13:34261459-34261088 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
382
               

               
Alignm identity:
               
269
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
92, 210
               

               
Conread position:
               
61-452
               

               
Cow position:
               
chr13:17439539-17439939 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
406
               

               
Alignm identity:
               
273
               

               
Alignm E-value:
               
9.94922e-44
               

               
Alignm gaps (pig, cow):
               
84, 213
               

               
Conread position:
               
61-525
               

               
Cow position:
               
chr13:55315962-55316437 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
484
               

               
Alignm identity:
               
331
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
94, 208
               

               
Conread position:
               
62-384
               

               
Cow position:
               
chr13:36877298-36876958 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
341
               

               
Alignm identity:
               
226
               

               
Alignm E-value:
               
3e-31
               

               
Alignm gaps (pig, cow):
               
87, 0
               

               
Conread position:
               
62-386
               

               
Cow position:
               
chr13:17347034-17346706 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
336
               

               
Alignm identity:
               
215
               

               
Alignm E-value:
               
3e-21
               

               
Alignm gaps (pig, cow):
               
8, 209
               

               
Conread position:
               
63-278
               

               
Cow position:
               
chr13:20530918-20531144 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
230
               

               
Alignm identity:
               
161
               

               
Alignm E-value:
               
4e-24
               

               
Alignm gaps (pig, cow):
               
89, 10
               

               
Conread position:
               
63-428
               

               
Cow position:
               
chr13:15192669-15193033 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
374
               

               
Alignm identity:
               
258
               

               
Alignm E-value:
               
1.4013e-45
               

               
Alignm gaps (pig, cow):
               
107, 203
               

               
Conread position:
               
64-270
               

               
Cow position:
               
chr13:20839792-20839573 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
220
               

               
Alignm identity:
               
162
               

               
Alignm E-value:
               
3e-31
               

               
Alignm gaps (pig, cow):
               
6, 0
               

               
Conread position:
               
65-264
               

               
Cow position:
               
chr13:52199312-52199102 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
212
               

               
Alignm identity:
               
150
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
80, 67
               

               
Conread position:
               
65-277
               

               
Cow position:
               
chr13:6975567-6975789 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
223
               

               
Alignm identity:
               
167
               

               
Alignm E-value:
               
6e-37
               

               
Alignm gaps (pig, cow):
               
79, 0
               

               
Conread position:
               
65-401
               

               
Cow position:
               
chr13:12202587-12202242 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
349
               

               
Alignm identity:
               
231
               

               
Alignm E-value:
               
3e-32
               

               
Alignm gaps (pig, cow):
               
88, 9
               

               
Conread position:
               
66-385
               

               
Cow position:
               
chr13:18170364-18170702 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
339
               

               
Alignm identity:
               
224
               

               
Alignm E-value:
               
2e-28
               

               
Alignm gaps (pig, cow):
               
86, 0
               

               
Conread position:
               
66-411
               

               
Cow position:
               
chr13:10845815-10845474 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
355
               

               
Alignm identity:
               
246
               

               
Alignm E-value:
               
7e-39
               

               
Alignm gaps (pig, cow):
               
79, 134
               

               
Conread position:
               
66-422
               

               
Cow position:
               
chr13:45073713-45074049 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
358
               

               
Alignm identity:
               
238
               

               
Alignm E-value:
               
3e-32
               

               
Alignm gaps (pig, cow):
               
213, 66
               

               
Conread position:
               
67-418
               

               
Cow position:
               
chr13:17745460-17745111 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
361
               

               
Alignm identity:
               
239
               

               
Alignm E-value:
               
3e-32
               

               
Alignm gaps (pig, cow):
               
67, 145
               

               
Conread position:
               
68-408
               

               
Cow position:
               
chr13:26150771-26151088 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
342
               

               
Alignm identity:
               
224
               

               
Alignm E-value:
               
4e-22
               

               
Alignm gaps (pig, cow):
               
113, 51
               

               
Conread position:
               
69-393
               

               
Cow position:
               
chr13:20610991-20611319 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
341
               

               
Alignm identity:
               
229
               

               
Alignm E-value:
               
6e-27
               

               
Alignm gaps (pig, cow):
               
76, 192
               

               
Conread position:
               
69-490
               

               
Cow position:
               
chr13:18172559-18172133 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
437
               

               
Alignm identity:
               
291
               

               
Alignm E-value:
               
3.00004e-41
               

               
Alignm gaps (pig, cow):
               
76, 194
               

               
Conread position:
               
73-529
               

               
Cow position:
               
chr13:37804094-37803661 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
470
               

               
Alignm identity:
               
316
               

               
Alignm E-value:
               
1e-33
               

               
Alignm gaps (pig, cow):
               
84, 42
               

               
Conread position:
               
74-270
               

               
Cow position:
               
chr13:2192922-2192719 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
205
               

               
Alignm identity:
               
152
               

               
Alignm E-value:
               
9e-31
               

               
Alignm gaps (pig, cow):
               
79, 102
               

               
Conread position:
               
74-392
               

               
Cow position:
               
chr13:52227886-52228210 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
334
               

               
Alignm identity:
               
234
               

               
Alignm E-value:
               
2e-38
               

               
Alignm gaps (pig, cow):
               
78, 192
               

               
Conread position:
               
74-400
               

               
Cow position:
               
chr13:51014966-51015296 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
343
               

               
Alignm identity:
               
228
               

               
Alignm E-value:
               
5e-26
               

               
Alignm gaps (pig, cow):
               
71, 174
               

               
Conread position:
               
74-427
               

               
Cow position:
               
chr13:53195078-53195428 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
365
               

               
Alignm identity:
               
242
               

               
Alignm E-value:
               
3e-29
               

               
Alignm gaps (pig, cow):
               
81, 166
               

               
Conread position:
               
75-428
               

               
Cow position:
               
chr13:19022491-19022123 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
371
               

               
Alignm identity:
               
242
               

               
Alignm E-value:
               
9e-31
               

               
Alignm gaps (pig, cow):
               
64, 215
               

               
Conread position:
               
77-396
               

               
Cow position:
               
chr13:20509943-20509620 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
332
               

               
Alignm identity:
               
220
               

               
Alignm E-value:
               
2e-28
               

               
Alignm gaps (pig, cow):
               
68, 192
               

               
Conread position:
               
78-400
               

               
Cow position:
               
chr13:60341024-60340690 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
342
               

               
Alignm identity:
               
232
               

               
Alignm E-value:
               
3e-31
               

               
Alignm gaps (pig, cow):
               
67, 190
               

               
Conread position:
               
81-428
               

               
Cow position:
               
chr13:48598111-48597764 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
355
               

               
Alignm identity:
               
236
               

               
Alignm E-value:
               
5e-35
               

               
Alignm gaps (pig, cow):
               
102, 175
               

               
Conread position:
               
82-427
               

               
Cow position:
               
chr13:46112173-46111825 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
356
               

               
Alignm identity:
               
234
               

               
Alignm E-value:
               
3e-30
               

               
Alignm gaps (pig, cow):
               
71, 210
               

               
Conread position:
               
84-396
               

               
Cow position:
               
chr13:59170861-59170539 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
331
               

               
Alignm identity:
               
217
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
54, 194
               

               
Conread position:
               
84-417
               

               
Cow position:
               
chr13:9593711-9593370 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
346
               

               
Alignm identity:
               
238
               

               
Alignm E-value:
               
8.99998e-41
               

               
Alignm gaps (pig, cow):
               
44, 188
               

               
Conread position:
               
84-427
               

               
Cow position:
               
chr13:37592734-37593093 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
364
               

               
Alignm identity:
               
247
               

               
Alignm E-value:
               
2e-36
               

               
Alignm gaps (pig, cow):
               
65, 192
               

               
Conread position:
               
84-495
               

               
Cow position:
               
chr13:19223853-19223443 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
424
               

               
Alignm identity:
               
277
               

               
Alignm E-value:
               
1e-34
               

               
Alignm gaps (pig, cow):
               
61, 156
               

               
Conread position:
               
85-399
               

               
Cow position:
               
chr13:61188738-61188416 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
334
               

               
Alignm identity:
               
223
               

               
Alignm E-value:
               
1e-23
               

               
Alignm gaps (pig, cow):
               
60, 35
               

               
Conread position:
               
85-408
               

               
Cow position:
               
chr13:38033885-38033550 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
338
               

               
Alignm identity:
               
222
               

               
Alignm E-value:
               
2e-28
               

               
Alignm gaps (pig, cow):
               
70, 216
               

               
Conread position:
               
87-434
               

               
Cow position:
               
chr13:15281735-15282087 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
361
               

               
Alignm identity:
               
241
               

               
Alignm E-value:
               
3e-32
               

               
Alignm gaps (pig, cow):
               
41, 190
               

               
Conread position:
               
87-450
               

               
Cow position:
               
chr13:547689-547328 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
378
               

               
Alignm identity:
               
245
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
43, 177
               

               
Conread position:
               
88-337
               

               
Cow position:
               
chr13:15528828-15529085 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
262
               

               
Alignm identity:
               
185
               

               
Alignm E-value:
               
9e-31
               

               
Alignm gaps (pig, cow):
               
57, 184
               

               
Conread position:
               
88-427
               

               
Cow position:
               
chr13:24230413-24230067 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
358
               

               
Alignm identity:
               
245
               

               
Alignm E-value:
               
1e-33
               

               
Alignm gaps (pig, cow):
               
27, 181
               

               
Conread position:
               
88-427
               

               
Cow position:
               
chr13:52749288-52749614 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
345
               

               
Alignm identity:
               
239
               

               
Alignm E-value:
               
6e-37
               

               
Alignm gaps (pig, cow):
               
97, 15
               

               
Conread position:
               
89-403
               

               
Cow position:
               
chr13:23512558-23512248 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
323
               

               
Alignm identity:
               
219
               

               
Alignm E-value:
               
3e-29
               

               
Alignm gaps (pig, cow):
               
93, 56
               

               
Conread position:
               
89-448
               

               
Cow position:
               
chr13:26369725-26369355 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
375
               

               
Alignm identity:
               
249
               

               
Alignm E-value:
               
5e-35
               

               
Alignm gaps (pig, cow):
               
65, 186
               

               
Conread position:
               
91-396
               

               
Cow position:
               
chr13:8652240-8652556 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
321
               

               
Alignm identity:
               
228
               

               
Alignm E-value:
               
3e-40
               

               
Alignm gaps (pig, cow):
               
16, 89
               

               
Conread position:
               
96-262
               

               
Cow position:
               
chr13:5079033-5079205 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
174
               

               
Alignm identity:
               
133
               

               
Alignm E-value:
               
8e-29
               

               
Alignm gaps (pig, cow):
               
53, 16
               

               
Conread position:
               
101-403
               

               
Cow position:
               
chr13:13339051-13338735 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
322
               

               
Alignm identity:
               
215
               

               
Alignm E-value:
               
2e-25
               

               
Alignm gaps (pig, cow):
               
44, 166
               

               
Conread position:
               
102-263
               

               
Cow position:
               
chr13:47186410-47186241 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
170
               

               
Alignm identity:
               
125
               

               
Alignm E-value:
               
1e-23
               

               
Alignm gaps (pig, cow):
               
47, 0
               

               
Conread position:
               
102-400
               

               
Cow position:
               
chr13:17338620-17338311 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
311
               

               
Alignm identity:
               
212
               

               
Alignm E-value:
               
5e-35
               

               
Alignm gaps (pig, cow):
               
43, 202
               

               
Conread position:
               
103-426
               

               
Cow position:
               
chr13:15195024-15195348 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
335
               

               
Alignm identity:
               
219
               

               
Alignm E-value:
               
4e-24
               

               
Alignm gaps (pig, cow):
               
52, 31
               

               
Conread position:
               
103-431
               

               
Cow position:
               
chr13:2404928-2404606 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
341
               

               
Alignm identity:
               
229
               

               
Alignm E-value:
               
2e-25
               

               
Alignm gaps (pig, cow):
               
33, 142
               

               
Conread position:
               
103-506
               

               
Cow position:
               
chr13:14771646-14771221 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
429
               

               
Alignm identity:
               
296
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
42, 167
               

               
Conread position:
               
103-525
               

               
Cow position:
               
chr13:21283521-21283954 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
446
               

               
Alignm identity:
               
296
               

               
Alignm E-value:
               
2e-37
               

               
Alignm gaps (pig, cow):
               
32, 113
               

               
Conread position:
               
105-260
               

               
Cow position:
               
chr13:15991039-15991211 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
173
               

               
Alignm identity:
               
134
               

               
Alignm E-value:
               
2e-25
               

               
Alignm gaps (pig, cow):
               
40, 0
               

               
Conread position:
               
105-384
               

               
Cow position:
               
chr13:49503345-49503634 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
298
               

               
Alignm identity:
               
200
               

               
Alignm E-value:
               
1e-20
               

               
Alignm gaps (pig, cow):
               
40, 161
               

               
Conread position:
               
105-487
               

               
Cow position:
               
chr13:11644116-11643731 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
404
               

               
Alignm identity:
               
263
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
48, 18
               

               
Conread position:
               
106-396
               

               
Cow position:
               
chr13:23651614-23651330 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
297
               

               
Alignm identity:
               
194
               

               
Alignm E-value:
               
1e-20
               

               
Alignm gaps (pig, cow):
               
47, 123
               

               
Conread position:
               
107-422
               

               
Cow position:
               
chr13:5758164-5758484 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
327
               

               
Alignm identity:
               
229
               

               
Alignm E-value:
               
2e-39
               

               
Alignm gaps (pig, cow):
               
46, 53
               

               
Conread position:
               
108-263
               

               
Cow position:
               
chr13:39232659-39232818 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
162
               

               
Alignm identity:
               
123
               

               
Alignm E-value:
               
4e-24
               

               
Alignm gaps (pig, cow):
               
23, 44
               

               
Conread position:
               
108-378
               

               
Cow position:
               
chr13:52929880-52929615 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
280
               

               
Alignm identity:
               
191
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
26, 36
               

               
Conread position:
               
111-430
               

               
Cow position:
               
chr13:20088522-20088862 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
343
               

               
Alignm identity:
               
226
               

               
Alignm E-value:
               
4e-24
               

               
Alignm gaps (pig, cow):
               
34, 172
               

               
Conread position:
               
112-428
               

               
Cow position:
               
chr13:15110500-15110167 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
336
               

               
Alignm identity:
               
222
               

               
Alignm E-value:
               
6e-27
               

               
Alignm gaps (pig, cow):
               
33, 163
               

               
Conread position:
               
114-384
               

               
Cow position:
               
chr13:49022696-49022970 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
285
               

               
Alignm identity:
               
193
               

               
Alignm E-value:
               
4e-23
               

               
Alignm gaps (pig, cow):
               
31, 102
               

               
Conread position:
               
118-328
               

               
Cow position:
               
chr13:7790184-7789965 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
221
               

               
Alignm identity:
               
160
               

               
Alignm E-value:
               
3e-30
               

               
Alignm gaps (pig, cow):
               
35, 75
               

               
Conread position:
               
118-524
               

               
Cow position:
               
chr13:4420517-4420088 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
438
               

               
Alignm identity:
               
295
               

               
Alignm E-value:
               
2e-36
               

               
Alignm gaps (pig, cow):
               
35, 161
               

               
Conread position:
               
120-263
               

               
Cow position:
               
chr13:22030256-22030106 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
151
               

               
Alignm identity:
               
113
               

               
Alignm E-value:
               
3e-21
               

               
Alignm gaps (pig, cow):
               
33, 0
               

               
Conread position:
               
126-393
               

               
Cow position:
               
chr13:6849087-6848815 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
278
               

               
Alignm identity:
               
188
               

               
Alignm E-value:
               
2e-25
               

               
Alignm gaps (pig, cow):
               
8, 136
               

               
Conread position:
               
126-403
               

               
Cow position:
               
chr13:7488696-7488421 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
286
               

               
Alignm identity:
               
194
               

               
Alignm E-value:
               
1e-24
               

               
Alignm gaps (pig, cow):
               
8, 101
               

               
Conread position:
               
126-428
               

               
Cow position:
               
chr13:54583034-54582727 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
311
               

               
Alignm identity:
               
204
               

               
Alignm E-value:
               
7e-28
               

               
Alignm gaps (pig, cow):
               
12, 142
               

               
Conread position:
               
128-385
               

               
Cow position:
               
chr13:27493691-27493960 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
273
               

               
Alignm identity:
               
185
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
29, 145
               

               
Conread position:
               
130-529
               

               
Cow position:
               
chr13:18696995-18696605 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
408
               

               
Alignm identity:
               
276
               

               
Alignm E-value:
               
3e-40
               

               
Alignm gaps (pig, cow):
               
8, 56
               

               
Conread position:
               
133-398
               

               
Cow position:
               
chr13:38698202-38697935 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
275
               

               
Alignm identity:
               
190
               

               
Alignm E-value:
               
7e-28
               

               
Alignm gaps (pig, cow):
               
25, 138
               

               
Conread position:
               
133-420
               

               
Cow position:
               
chr13:20473540-20473822 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
298
               

               
Alignm identity:
               
203
               

               
Alignm E-value:
               
4e-24
               

               
Alignm gaps (pig, cow):
               
23, 58
               

               
Conread position:
               
134-384
               

               
Cow position:
               
chr13:17966061-17966312 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
257
               

               
Alignm identity:
               
172
               

               
Alignm E-value:
               
4e-24
               

               
Alignm gaps (pig, cow):
               
205, 101
               

               
Conread position:
               
135-384
               

               
Cow position:
               
chr13:26698348-26698600 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
258
               

               
Alignm identity:
               
172
               

               
Alignm E-value:
               
3e-21
               

               
Alignm gaps (pig, cow):
               
22, 126
               

               
Conread position:
               
135-396
               

               
Cow position:
               
chr13:49520675-49520936 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
264
               

               
Alignm identity:
               
173
               

               
Alignm E-value:
               
2e-26
               

               
Alignm gaps (pig, cow):
               
104, 131
               

               
Conread position:
               
141-392
               

               
Cow position:
               
chr13:1363835-1363584 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
261
               

               
Alignm identity:
               
182
               

               
Alignm E-value:
               
6e-27
               

               
Alignm gaps (pig, cow):
               
44, 117
               

               
Conread position:
               
141-400
               

               
Cow position:
               
chr13:2823000-2822752 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
266
               

               
Alignm identity:
               
187
               

               
Alignm E-value:
               
5e-26
               

               
Alignm gaps (pig, cow):
               
98, 44
               

               
Conread position:
               
141-423
               

               
Cow position:
               
chr13:8374631-8374915 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
290
               

               
Alignm identity:
               
197
               

               
Alignm E-value:
               
3e-31
               

               
Alignm gaps (pig, cow):
               
98, 126
               

               
Conread position:
               
142-393
               

               
Cow position:
               
chr13:21269440-21269693 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
260
               

               
Alignm identity:
               
176
               

               
Alignm E-value:
               
1e-23
               

               
Alignm gaps (pig, cow):
               
43, 115
               

               
Conread position:
               
142-400
               

               
Cow position:
               
chr13:13954248-13954510 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
269
               

               
Alignm identity:
               
187
               

               
Alignm E-value:
               
2e-28
               

               
Alignm gaps (pig, cow):
               
43, 117
               

               
Conread position:
               
143-428
               

               
Cow position:
               
chr13:18058108-18058394 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
293
               

               
Alignm identity:
               
199
               

               
Alignm E-value:
               
8e-30
               

               
Alignm gaps (pig, cow):
               
92, 14
               

               
Conread position:
               
144-396
               

               
Cow position:
               
chr13:5910758-5911009 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
261
               

               
Alignm identity:
               
176
               

               
Alignm E-value:
               
3e-21
               

               
Alignm gaps (pig, cow):
               
42, 128
               

               
Conread position:
               
145-414
               

               
Cow position:
               
chr13:15194597-15194868 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
277
               

               
Alignm identity:
               
185
               

               
Alignm E-value:
               
2e-25
               

               
Alignm gaps (pig, cow):
               
84, 13
               

               
Conread position:
               
145-520
               

               
Cow position:
               
chr13:51115891-51116265 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
384
               

               
Alignm identity:
               
249
               

               
Alignm E-value:
               
3e-32
               

               
Alignm gaps (pig, cow):
               
94, 61
               

               
Conread position:
               
147-427
               

               
Cow position:
               
chr13:18929665-18929383 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
288
               

               
Alignm identity:
               
187
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
39, 7
               

               
Conread position:
               
147-428
               

               
Cow position:
               
chr13:20288466-20288191 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
287
               

               
Alignm identity:
               
189
               

               
Alignm E-value:
               
4e-22
               

               
Alignm gaps (pig, cow):
               
14, 109
               

               
Conread position:
               
154-267
               

               
Cow position:
               
chr13:6389508-6389392 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
117
               

               
Alignm identity:
               
93
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
83, 0
               

               
Conread position:
               
154-428
               

               
Cow position:
               
chr13:6663623-6663899 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
281
               

               
Alignm identity:
               
186
               

               
Alignm E-value:
               
6e-27
               

               
Alignm gaps (pig, cow):
               
79, 28
               

               
Conread position:
               
155-426
               

               
Cow position:
               
chr13:14576334-14576068 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
278
               

               
Alignm identity:
               
190
               

               
Alignm E-value:
               
2e-25
               

               
Alignm gaps (pig, cow):
               
9, 74
               

               
Conread position:
               
155-430
               

               
Cow position:
               
chr13:18995256-18994977 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
283
               

               
Alignm identity:
               
194
               

               
Alignm E-value:
               
3e-31
               

               
Alignm gaps (pig, cow):
               
9, 116
               

               
Conread position:
               
162-260
               

               
Cow position:
               
chr13:4514581-4514480 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
102
               

               
Alignm identity:
               
86
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
18, 0
               

               
Conread position:
               
163-525
               

               
Cow position:
               
chr13:26366000-26365653 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
366
               

               
Alignm identity:
               
236
               

               
Alignm E-value:
               
5e-26
               

               
Alignm gaps (pig, cow):
               
76, 57
               

               
Conread position:
               
164-400
               

               
Cow position:
               
chr13:27550857-27550621 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
243
               

               
Alignm identity:
               
166
               

               
Alignm E-value:
               
1e-23
               

               
Alignm gaps (pig, cow):
               
74, 27
               

               
Conread position:
               
164-428
               

               
Cow position:
               
chr13:21135782-21136054 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
280
               

               
Alignm identity:
               
190
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
42, 46
               

               
Conread position:
               
167-428
               

               
Cow position:
               
chr13:54388904-54389168 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
269
               

               
Alignm identity:
               
182
               

               
Alignm E-value:
               
2e-27
               

               
Alignm gaps (pig, cow):
               
64, 100
               

               
Conread position:
               
172-427
               

               
Cow position:
               
chr13:14967105-14967355 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
261
               

               
Alignm identity:
               
180
               

               
Alignm E-value:
               
6e-27
               

               
Alignm gaps (pig, cow):
               
12, 86
               

               
Conread position:
               
177-520
               

               
Cow position:
               
chr13:8355302-8354969 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
348
               

               
Alignm identity:
               
231
               

               
Alignm E-value:
               
3e-31
               

               
Alignm gaps (pig, cow):
               
105, 54
               

               
Conread position:
               
179-533
               

               
Cow position:
               
chr13:54128490-54128851 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
369
               

               
Alignm identity:
               
238
               

               
Alignm E-value:
               
5e-26
               

               
Alignm gaps (pig, cow):
               
55, 78
               

               
Conread position:
               
188-428
               

               
Cow position:
               
chr13:50750960-50751201 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
247
               

               
Alignm identity:
               
173
               

               
Alignm E-value:
               
8e-29
               

               
Alignm gaps (pig, cow):
               
47, 80
               

               
Conread position:
               
260-520
               

               
Cow position:
               
chr13:25450459-25450724 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
266
               

               
Alignm identity:
               
174
               

               
Alignm E-value:
               
5e-26
               

               
Alignm gaps (pig, cow):
               
22, 0
               

               
Conread position:
               
346-524
               

               
Cow position:
               
chr13:18906788-18906617 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
179
               

               
Alignm identity:
               
126
               

               
Alignm E-value:
               
1e-20
               

               
Alignm gaps (pig, cow):
               
52, 0
               

               
Conread position:
               
346-527
               

               
Cow position:
               
chr13:7208948-7208757 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
192
               

               
Alignm identity:
               
143
               

               
Alignm E-value:
               
3e-29
               

               
Alignm gaps (pig, cow):
               
53, 0
               

               
Conread position:
               
346-527
               

               
Cow position:
               
chr13:18049287-18049468 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
184
               

               
Alignm identity:
               
132
               

               
Alignm E-value:
               
2e-25
               

               
Alignm gaps (pig, cow):
               
54, 114
               

               
Conread position:
               
346-527
               

               
Cow position:
               
chr13:40409644-40409822 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
182
               

               
Alignm identity:
               
134
               

               
Alignm E-value:
               
8e-29
               

               
Alignm gaps (pig, cow):
               
52, 0
               

               
Conread position:
               
348-524
               

               
Cow position:
               
chr13:42017874-42018053 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
180
               

               
Alignm identity:
               
127
               

               
Alignm E-value:
               
4e-23
               

               
Alignm gaps (pig, cow):
               
43, 0
               

               
Conread position:
               
349-524
               

               
Cow position:
               
chr13:52199060-52198892 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
176
               

               
Alignm identity:
               
127
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
33, 0
               

               
Conread position:
               
354-531
               

               
Cow position:
               
chr13:3948431-3948255 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
179
               

               
Alignm identity:
               
130
               

               
Alignm E-value:
               
2e-26
               

               
Alignm gaps (pig, cow):
               
48, 98
               
Show alignments to all cow chromosomes.