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Cow genome map

           
Conread name:
           
Pig3-SRG8023H08
        

               
Conread position:
               
1-228
               

               
Cow position:
               
chr18:30248462-30248232 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
234
               

               
Alignm identity:
               
170
               

               
Alignm E-value:
               
1e-34
               

               
Alignm gaps (pig, cow):
               
22, 76
               

               
Conread position:
               
1-280
               

               
Cow position:
               
chr18:3209387-3209666 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
288
               

               
Alignm identity:
               
199
               

               
Alignm E-value:
               
9e-32
               

               
Alignm gaps (pig, cow):
               
148, 29
               

               
Conread position:
               
1-384
               

               
Cow position:
               
chr18:11779331-11779707 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
389
               

               
Alignm identity:
               
265
               

               
Alignm E-value:
               
1.4013e-45
               

               
Alignm gaps (pig, cow):
               
44, 127
               

               
Conread position:
               
1-393
               

               
Cow position:
               
chr18:55552631-55553030 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
411
               

               
Alignm identity:
               
300
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
142, 247
               

               
Conread position:
               
1-428
               

               
Cow position:
               
chr18:6881671-6881256 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
434
               

               
Alignm identity:
               
293
               

               
Alignm E-value:
               
9.94922e-44
               

               
Alignm gaps (pig, cow):
               
137, 16
               

               
Conread position:
               
2-262
               

               
Cow position:
               
chr18:18627660-18627387 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
274
               

               
Alignm identity:
               
205
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
143, 0
               

               
Conread position:
               
2-270
               

               
Cow position:
               
chr18:41270754-41271031 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
285
               

               
Alignm identity:
               
215
               

               
Alignm E-value:
               
9.94922e-44
               

               
Alignm gaps (pig, cow):
               
54, 49
               

               
Conread position:
               
2-275
               

               
Cow position:
               
chr18:36750167-36750414 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
276
               

               
Alignm identity:
               
195
               

               
Alignm E-value:
               
1e-23
               

               
Alignm gaps (pig, cow):
               
178, 41
               

               
Conread position:
               
2-428
               

               
Cow position:
               
chr18:45904225-45903798 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
434
               

               
Alignm identity:
               
292
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
134, 255
               

               
Conread position:
               
2-520
               

               
Cow position:
               
chr18:36458601-36459114 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
529
               

               
Alignm identity:
               
366
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
151, 270
               

               
Conread position:
               
3-202
               

               
Cow position:
               
chr18:35535617-35535410 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
209
               

               
Alignm identity:
               
157
               

               
Alignm E-value:
               
1e-33
               

               
Alignm gaps (pig, cow):
               
135, 71
               

               
Conread position:
               
3-218
               

               
Cow position:
               
chr18:11811645-11811865 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
222
               

               
Alignm identity:
               
171
               

               
Alignm E-value:
               
1.00053e-42
               

               
Alignm gaps (pig, cow):
               
39, 100
               

               
Conread position:
               
3-224
               

               
Cow position:
               
chr18:9007817-9008037 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
223
               

               
Alignm identity:
               
169
               

               
Alignm E-value:
               
1.00053e-42
               

               
Alignm gaps (pig, cow):
               
152, 98
               

               
Conread position:
               
3-224
               

               
Cow position:
               
chr18:50637792-50637564 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
232
               

               
Alignm identity:
               
171
               

               
Alignm E-value:
               
1e-34
               

               
Alignm gaps (pig, cow):
               
142, 27
               

               
Conread position:
               
3-227
               

               
Cow position:
               
chr18:7649660-7649895 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
237
               

               
Alignm identity:
               
173
               

               
Alignm E-value:
               
1e-34
               

               
Alignm gaps (pig, cow):
               
32, 126
               

               
Conread position:
               
3-227
               

               
Cow position:
               
chr18:21810613-21810378 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
237
               

               
Alignm identity:
               
171
               

               
Alignm E-value:
               
3e-31
               

               
Alignm gaps (pig, cow):
               
142, 36
               

               
Conread position:
               
3-227
               

               
Cow position:
               
chr18:29768582-29768813 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
233
               

               
Alignm identity:
               
167
               

               
Alignm E-value:
               
8e-31
               

               
Alignm gaps (pig, cow):
               
145, 71
               

               
Conread position:
               
3-227
               

               
Cow position:
               
chr18:54646159-54646377 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
225
               

               
Alignm identity:
               
164
               

               
Alignm E-value:
               
1e-35
               

               
Alignm gaps (pig, cow):
               
25, 0
               

               
Conread position:
               
3-228
               

               
Cow position:
               
chr18:7930475-7930241 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
239
               

               
Alignm identity:
               
175
               

               
Alignm E-value:
               
1e-33
               

               
Alignm gaps (pig, cow):
               
149, 66
               

               
Conread position:
               
3-229
               

               
Cow position:
               
chr18:13293177-13293410 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
235
               

               
Alignm identity:
               
179
               

               
Alignm E-value:
               
3.00018e-42
               

               
Alignm gaps (pig, cow):
               
24, 72
               

               
Conread position:
               
3-229
               

               
Cow position:
               
chr18:48407457-48407691 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
237
               

               
Alignm identity:
               
180
               

               
Alignm E-value:
               
3.00004e-41
               

               
Alignm gaps (pig, cow):
               
142, 228
               

               
Conread position:
               
3-229
               

               
Cow position:
               
chr18:55782758-55782518 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
241
               

               
Alignm identity:
               
179
               

               
Alignm E-value:
               
2e-36
               

               
Alignm gaps (pig, cow):
               
66, 0
               

               
Conread position:
               
3-248
               

               
Cow position:
               
chr18:4624761-4624510 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
254
               

               
Alignm identity:
               
184
               

               
Alignm E-value:
               
6e-38
               

               
Alignm gaps (pig, cow):
               
151, 73
               

               
Conread position:
               
3-254
               

               
Cow position:
               
chr18:9818508-9818765 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
262
               

               
Alignm identity:
               
189
               

               
Alignm E-value:
               
4e-35
               

               
Alignm gaps (pig, cow):
               
146, 24
               

               
Conread position:
               
3-258
               

               
Cow position:
               
chr18:11867021-11867267 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
256
               

               
Alignm identity:
               
197
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
30, 0
               

               
Conread position:
               
3-259
               

               
Cow position:
               
chr18:29796764-29796493 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
273
               

               
Alignm identity:
               
194
               

               
Alignm E-value:
               
3e-31
               

               
Alignm gaps (pig, cow):
               
33, 23
               

               
Conread position:
               
3-259
               

               
Cow position:
               
chr18:35058012-35058271 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
265
               

               
Alignm identity:
               
191
               

               
Alignm E-value:
               
5e-37
               

               
Alignm gaps (pig, cow):
               
139, 31
               

               
Conread position:
               
3-260
               

               
Cow position:
               
chr18:3098644-3098385 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
265
               

               
Alignm identity:
               
206
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
136, 56
               

               
Conread position:
               
3-260
               

               
Cow position:
               
chr18:5190011-5189755 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
270
               

               
Alignm identity:
               
209
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
146, 69
               

               
Conread position:
               
3-261
               

               
Cow position:
               
chr18:6290452-6290720 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
270
               

               
Alignm identity:
               
202
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
142, 102
               

               
Conread position:
               
3-262
               

               
Cow position:
               
chr18:20864655-20864924 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
275
               

               
Alignm identity:
               
210
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
142, 41
               

               
Conread position:
               
3-263
               

               
Cow position:
               
chr18:32121393-32121126 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
270
               

               
Alignm identity:
               
195
               

               
Alignm E-value:
               
2e-40
               

               
Alignm gaps (pig, cow):
               
27, 56
               

               
Conread position:
               
3-266
               

               
Cow position:
               
chr18:1584537-1584292 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
264
               

               
Alignm identity:
               
183
               

               
Alignm E-value:
               
6e-27
               

               
Alignm gaps (pig, cow):
               
16, 0
               

               
Conread position:
               
3-269
               

               
Cow position:
               
chr18:43563896-43564171 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
279
               

               
Alignm identity:
               
198
               

               
Alignm E-value:
               
4e-35
               

               
Alignm gaps (pig, cow):
               
112, 49
               

               
Conread position:
               
3-270
               

               
Cow position:
               
chr18:7486920-7487194 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
280
               

               
Alignm identity:
               
207
               

               
Alignm E-value:
               
9.94922e-44
               

               
Alignm gaps (pig, cow):
               
97, 233
               

               
Conread position:
               
3-270
               

               
Cow position:
               
chr18:20998946-20998679 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
278
               

               
Alignm identity:
               
208
               

               
Alignm E-value:
               
3.00018e-42
               

               
Alignm gaps (pig, cow):
               
142, 56
               

               
Conread position:
               
3-272
               

               
Cow position:
               
chr18:51485603-51485883 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
281
               

               
Alignm identity:
               
191
               

               
Alignm E-value:
               
3e-30
               

               
Alignm gaps (pig, cow):
               
142, 0
               

               
Conread position:
               
3-273
               

               
Cow position:
               
chr18:16418025-16417757 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
279
               

               
Alignm identity:
               
201
               

               
Alignm E-value:
               
5e-37
               

               
Alignm gaps (pig, cow):
               
142, 25
               

               
Conread position:
               
3-273
               

               
Cow position:
               
chr18:42966506-42966811 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
306
               

               
Alignm identity:
               
227
               

               
Alignm E-value:
               
8.00001e-41
               

               
Alignm gaps (pig, cow):
               
87, 0
               

               
Conread position:
               
3-274
               

               
Cow position:
               
chr18:9010400-9010665 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
273
               

               
Alignm identity:
               
203
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
232, 71
               

               
Conread position:
               
3-274
               

               
Cow position:
               
chr18:19850076-19849807 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
278
               

               
Alignm identity:
               
207
               

               
Alignm E-value:
               
1.4013e-45
               

               
Alignm gaps (pig, cow):
               
155, 39
               

               
Conread position:
               
3-274
               

               
Cow position:
               
chr18:35797289-35797572 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
286
               

               
Alignm identity:
               
189
               

               
Alignm E-value:
               
3e-22
               

               
Alignm gaps (pig, cow):
               
34, 75
               

               
Conread position:
               
3-277
               

               
Cow position:
               
chr18:601502-601234 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
279
               

               
Alignm identity:
               
203
               

               
Alignm E-value:
               
7e-39
               

               
Alignm gaps (pig, cow):
               
144, 69
               

               
Conread position:
               
3-280
               

               
Cow position:
               
chr18:1594261-1593989 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
282
               

               
Alignm identity:
               
195
               

               
Alignm E-value:
               
9e-32
               

               
Alignm gaps (pig, cow):
               
66, 92
               

               
Conread position:
               
3-297
               

               
Cow position:
               
chr18:18340285-18340002 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
296
               

               
Alignm identity:
               
206
               

               
Alignm E-value:
               
5e-36
               

               
Alignm gaps (pig, cow):
               
223, 56
               

               
Conread position:
               
3-323
               

               
Cow position:
               
chr18:10861748-10861440 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
323
               

               
Alignm identity:
               
224
               

               
Alignm E-value:
               
2e-37
               

               
Alignm gaps (pig, cow):
               
235, 27
               

               
Conread position:
               
3-323
               

               
Cow position:
               
chr18:33606298-33606620 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
331
               

               
Alignm identity:
               
239
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
20, 61
               

               
Conread position:
               
3-324
               

               
Cow position:
               
chr18:34621696-34621370 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
336
               

               
Alignm identity:
               
241
               

               
Alignm E-value:
               
9.94922e-44
               

               
Alignm gaps (pig, cow):
               
140, 74
               

               
Conread position:
               
3-337
               

               
Cow position:
               
chr18:23766754-23766407 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
354
               

               
Alignm identity:
               
244
               

               
Alignm E-value:
               
2e-38
               

               
Alignm gaps (pig, cow):
               
38, 111
               

               
Conread position:
               
3-338
               

               
Cow position:
               
chr18:4796637-4796976 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
346
               

               
Alignm identity:
               
229
               

               
Alignm E-value:
               
3e-32
               

               
Alignm gaps (pig, cow):
               
142, 112
               

               
Conread position:
               
3-361
               

               
Cow position:
               
chr18:55462041-55461675 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
371
               

               
Alignm identity:
               
246
               

               
Alignm E-value:
               
2e-36
               

               
Alignm gaps (pig, cow):
               
65, 239
               

               
Conread position:
               
3-392
               

               
Cow position:
               
chr18:1585436-1585051 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
398
               

               
Alignm identity:
               
263
               

               
Alignm E-value:
               
1e-35
               

               
Alignm gaps (pig, cow):
               
98, 79
               

               
Conread position:
               
3-393
               

               
Cow position:
               
chr18:27078516-27078927 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
414
               

               
Alignm identity:
               
282
               

               
Alignm E-value:
               
4.2039e-45
               

               
Alignm gaps (pig, cow):
               
38, 114
               

               
Conread position:
               
3-396
               

               
Cow position:
               
chr18:14586808-14586404 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
418
               

               
Alignm identity:
               
295
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
112, 79
               

               
Conread position:
               
3-396
               

               
Cow position:
               
chr18:28794398-28794006 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
400
               

               
Alignm identity:
               
271
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
153, 267
               

               
Conread position:
               
3-404
               

               
Cow position:
               
chr18:45570692-45571087 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
408
               

               
Alignm identity:
               
287
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
232, 25
               

               
Conread position:
               
3-404
               

               
Cow position:
               
chr18:49200315-49200707 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
420
               

               
Alignm identity:
               
283
               

               
Alignm E-value:
               
8e-30
               

               
Alignm gaps (pig, cow):
               
142, 33
               

               
Conread position:
               
3-407
               

               
Cow position:
               
chr18:49100701-49100290 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
420
               

               
Alignm identity:
               
287
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
65, 25
               

               
Conread position:
               
3-409
               

               
Cow position:
               
chr18:56165651-56166060 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
425
               

               
Alignm identity:
               
279
               

               
Alignm E-value:
               
8e-31
               

               
Alignm gaps (pig, cow):
               
121, 187
               

               
Conread position:
               
3-411
               

               
Cow position:
               
chr18:47183617-47183209 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
424
               

               
Alignm identity:
               
287
               

               
Alignm E-value:
               
8.00001e-41
               

               
Alignm gaps (pig, cow):
               
55, 246
               

               
Conread position:
               
3-416
               

               
Cow position:
               
chr18:20125974-20126392 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
427
               

               
Alignm identity:
               
291
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
142, 25
               

               
Conread position:
               
3-423
               

               
Cow position:
               
chr18:52635413-52634975 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
441
               

               
Alignm identity:
               
313
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
128, 71
               

               
Conread position:
               
3-424
               

               
Cow position:
               
chr18:20174462-20174036 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
435
               

               
Alignm identity:
               
299
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
150, 271
               

               
Conread position:
               
3-424
               

               
Cow position:
               
chr18:38606904-38607316 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
428
               

               
Alignm identity:
               
285
               

               
Alignm E-value:
               
3.00018e-42
               

               
Alignm gaps (pig, cow):
               
243, 111
               

               
Conread position:
               
3-425
               

               
Cow position:
               
chr18:19193677-19193269 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
430
               

               
Alignm identity:
               
304
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
232, 25
               

               
Conread position:
               
3-427
               

               
Cow position:
               
chr18:28101294-28101731 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
444
               

               
Alignm identity:
               
301
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
142, 260
               

               
Conread position:
               
3-427
               

               
Cow position:
               
chr18:43950507-43950923 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
439
               

               
Alignm identity:
               
295
               

               
Alignm E-value:
               
6e-38
               

               
Alignm gaps (pig, cow):
               
40, 100
               

               
Conread position:
               
3-428
               

               
Cow position:
               
chr18:9974657-9974230 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
439
               

               
Alignm identity:
               
301
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
143, 71
               

               
Conread position:
               
3-428
               

               
Cow position:
               
chr18:12118177-12117753 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
439
               

               
Alignm identity:
               
292
               

               
Alignm E-value:
               
2e-40
               

               
Alignm gaps (pig, cow):
               
71, 197
               

               
Conread position:
               
3-428
               

               
Cow position:
               
chr18:39662445-39662877 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
444
               

               
Alignm identity:
               
306
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
29, 121
               

               
Conread position:
               
3-430
               

               
Cow position:
               
chr18:37002299-37002733 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
443
               

               
Alignm identity:
               
295
               

               
Alignm E-value:
               
4.06377e-44
               

               
Alignm gaps (pig, cow):
               
142, 22
               

               
Conread position:
               
3-432
               

               
Cow position:
               
chr18:7955816-7956251 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
447
               

               
Alignm identity:
               
308
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
133, 64
               

               
Conread position:
               
3-493
               

               
Cow position:
               
chr18:15881186-15880688 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
513
               

               
Alignm identity:
               
338
               

               
Alignm E-value:
               
1.00053e-42
               

               
Alignm gaps (pig, cow):
               
146, 25
               

               
Conread position:
               
3-497
               

               
Cow position:
               
chr18:11790600-11791094 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
512
               

               
Alignm identity:
               
320
               

               
Alignm E-value:
               
1e-25
               

               
Alignm gaps (pig, cow):
               
52, 96
               

               
Conread position:
               
4-242
               

               
Cow position:
               
chr18:32244345-32244107 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
243
               

               
Alignm identity:
               
181
               

               
Alignm E-value:
               
8.00001e-41
               

               
Alignm gaps (pig, cow):
               
64, 24
               

               
Conread position:
               
4-263
               

               
Cow position:
               
chr18:13172856-13172585 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
275
               

               
Alignm identity:
               
209
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
44, 259
               

               
Conread position:
               
4-273
               

               
Cow position:
               
chr18:33793373-33793649 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
279
               

               
Alignm identity:
               
202
               

               
Alignm E-value:
               
3.00018e-42
               

               
Alignm gaps (pig, cow):
               
48, 249
               

               
Conread position:
               
4-278
               

               
Cow position:
               
chr18:52382366-52382651 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
290
               

               
Alignm identity:
               
211
               

               
Alignm E-value:
               
9.00054e-42
               

               
Alignm gaps (pig, cow):
               
29, 125
               

               
Conread position:
               
4-280
               

               
Cow position:
               
chr18:29387896-29388171 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
279
               

               
Alignm identity:
               
205
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
229, 70
               

               
Conread position:
               
4-428
               

               
Cow position:
               
chr18:29058823-29058402 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
438
               

               
Alignm identity:
               
299
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
122, 24
               

               
Conread position:
               
4-524
               

               
Cow position:
               
chr18:37023887-37023371 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
538
               

               
Alignm identity:
               
363
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
141, 68
               

               
Conread position:
               
5-229
               

               
Cow position:
               
chr18:21721610-21721377 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
234
               

               
Alignm identity:
               
182
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
148, 0
               

               
Conread position:
               
5-298
               

               
Cow position:
               
chr18:55396987-55397274 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
303
               

               
Alignm identity:
               
206
               

               
Alignm E-value:
               
4e-25
               

               
Alignm gaps (pig, cow):
               
162, 23
               

               
Conread position:
               
5-331
               

               
Cow position:
               
chr18:45104776-45104444 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
342
               

               
Alignm identity:
               
243
               

               
Alignm E-value:
               
2.99878e-43
               

               
Alignm gaps (pig, cow):
               
122, 71
               

               
Conread position:
               
5-340
               

               
Cow position:
               
chr18:35636681-35636340 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
347
               

               
Alignm identity:
               
249
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
24, 277
               

               
Conread position:
               
5-392
               

               
Cow position:
               
chr18:7950783-7951177 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
405
               

               
Alignm identity:
               
276
               

               
Alignm E-value:
               
8.00001e-41
               

               
Alignm gaps (pig, cow):
               
138, 190
               

               
Conread position:
               
5-396
               

               
Cow position:
               
chr18:17004920-17005326 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
411
               

               
Alignm identity:
               
291
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
142, 276
               

               
Conread position:
               
5-420
               

               
Cow position:
               
chr18:11322259-11322687 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
438
               

               
Alignm identity:
               
296
               

               
Alignm E-value:
               
3.00004e-41
               

               
Alignm gaps (pig, cow):
               
82, 217
               

               
Conread position:
               
5-421
               

               
Cow position:
               
chr18:7359407-7359837 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
440
               

               
Alignm identity:
               
303
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
135, 23
               

               
Conread position:
               
5-422
               

               
Cow position:
               
chr18:10575782-10576203 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
435
               

               
Alignm identity:
               
309
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
147, 73
               

               
Conread position:
               
5-426
               

               
Cow position:
               
chr18:28658242-28657814 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
438
               

               
Alignm identity:
               
287
               

               
Alignm E-value:
               
2e-36
               

               
Alignm gaps (pig, cow):
               
140, 15
               

               
Conread position:
               
5-428
               

               
Cow position:
               
chr18:3180090-3180510 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
435
               

               
Alignm identity:
               
306
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
50, 16
               

               
Conread position:
               
6-229
               

               
Cow position:
               
chr18:81427-81656 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
231
               

               
Alignm identity:
               
174
               

               
Alignm E-value:
               
8.00001e-41
               

               
Alignm gaps (pig, cow):
               
139, 223
               

               
Conread position:
               
6-384
               

               
Cow position:
               
chr18:9365583-9365975 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
397
               

               
Alignm identity:
               
277
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
139, 276
               

               
Conread position:
               
6-384
               

               
Cow position:
               
chr18:34527439-34527041 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
406
               

               
Alignm identity:
               
272
               

               
Alignm E-value:
               
3e-33
               

               
Alignm gaps (pig, cow):
               
29, 64
               

               
Conread position:
               
6-426
               

               
Cow position:
               
chr18:51406224-51405814 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
433
               

               
Alignm identity:
               
306
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
174, 34
               

               
Conread position:
               
7-338
               

               
Cow position:
               
chr18:11831810-11832124 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
332
               

               
Alignm identity:
               
242
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
147, 0
               

               
Conread position:
               
7-370
               

               
Cow position:
               
chr18:29958474-29958124 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
368
               

               
Alignm identity:
               
262
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
331, 67
               

               
Conread position:
               
7-539
               

               
Cow position:
               
chr18:35012634-35012094 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
555
               

               
Alignm identity:
               
378
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
136, 203
               

               
Conread position:
               
8-219
               

               
Cow position:
               
chr18:45395666-45395896 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
231
               

               
Alignm identity:
               
180
               

               
Alignm E-value:
               
2e-39
               

               
Alignm gaps (pig, cow):
               
20, 0
               

               
Conread position:
               
8-250
               

               
Cow position:
               
chr18:39709563-39709812 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
252
               

               
Alignm identity:
               
191
               

               
Alignm E-value:
               
1.4013e-45
               

               
Alignm gaps (pig, cow):
               
137, 212
               

               
Conread position:
               
8-259
               

               
Cow position:
               
chr18:47314625-47314357 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
269
               

               
Alignm identity:
               
197
               

               
Alignm E-value:
               
2e-38
               

               
Alignm gaps (pig, cow):
               
34, 0
               

               
Conread position:
               
8-262
               

               
Cow position:
               
chr18:56168244-56167985 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
264
               

               
Alignm identity:
               
186
               

               
Alignm E-value:
               
9e-32
               

               
Alignm gaps (pig, cow):
               
141, 32
               

               
Conread position:
               
8-269
               

               
Cow position:
               
chr18:16045327-16045060 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
269
               

               
Alignm identity:
               
191
               

               
Alignm E-value:
               
7e-39
               

               
Alignm gaps (pig, cow):
               
162, 145
               

               
Conread position:
               
8-270
               

               
Cow position:
               
chr18:19159291-19159028 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
268
               

               
Alignm identity:
               
208
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
146, 66
               

               
Conread position:
               
8-273
               

               
Cow position:
               
chr18:4315972-4316256 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
286
               

               
Alignm identity:
               
211
               

               
Alignm E-value:
               
3.00004e-41
               

               
Alignm gaps (pig, cow):
               
26, 130
               

               
Conread position:
               
8-372
               

               
Cow position:
               
chr18:39002122-39001765 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
371
               

               
Alignm identity:
               
267
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
65, 105
               

               
Conread position:
               
8-379
               

               
Cow position:
               
chr18:4540199-4539833 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
381
               

               
Alignm identity:
               
268
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
145, 66
               

               
Conread position:
               
8-396
               

               
Cow position:
               
chr18:22121207-22120819 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
402
               

               
Alignm identity:
               
300
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
128, 34
               

               
Conread position:
               
8-396
               

               
Cow position:
               
chr18:47511667-47512072 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
411
               

               
Alignm identity:
               
283
               

               
Alignm E-value:
               
4.2039e-45
               

               
Alignm gaps (pig, cow):
               
64, 265
               

               
Conread position:
               
8-424
               

               
Cow position:
               
chr18:9089378-9089794 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
427
               

               
Alignm identity:
               
286
               

               
Alignm E-value:
               
9.80909e-45
               

               
Alignm gaps (pig, cow):
               
137, 66
               

               
Conread position:
               
8-426
               

               
Cow position:
               
chr18:56181782-56181359 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
434
               

               
Alignm identity:
               
307
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
149, 169
               

               
Conread position:
               
11-277
               

               
Cow position:
               
chr18:24342301-24342568 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
271
               

               
Alignm identity:
               
208
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
82, 148
               

               
Conread position:
               
11-280
               

               
Cow position:
               
chr18:10954155-10954430 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
283
               

               
Alignm identity:
               
189
               

               
Alignm E-value:
               
3e-22
               

               
Alignm gaps (pig, cow):
               
133, 22
               

               
Conread position:
               
11-283
               

               
Cow position:
               
chr18:11618158-11618430 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
281
               

               
Alignm identity:
               
194
               

               
Alignm E-value:
               
8e-31
               

               
Alignm gaps (pig, cow):
               
114, 73
               

               
Conread position:
               
11-298
               

               
Cow position:
               
chr18:56150980-56150679 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
303
               

               
Alignm identity:
               
226
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
115, 275
               

               
Conread position:
               
11-305
               

               
Cow position:
               
chr18:8105267-8104971 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
304
               

               
Alignm identity:
               
222
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
57, 90
               

               
Conread position:
               
11-399
               

               
Cow position:
               
chr18:52637858-52637460 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
412
               

               
Alignm identity:
               
288
               

               
Alignm E-value:
               
9.80909e-45
               

               
Alignm gaps (pig, cow):
               
32, 240
               

               
Conread position:
               
11-428
               

               
Cow position:
               
chr18:43284075-43283654 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
436
               

               
Alignm identity:
               
304
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
142, 19
               

               
Conread position:
               
11-457
               

               
Cow position:
               
chr18:19273423-19272972 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
467
               

               
Alignm identity:
               
331
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
132, 31
               

               
Conread position:
               
12-228
               

               
Cow position:
               
chr18:49161779-49161544 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
236
               

               
Alignm identity:
               
185
               

               
Alignm E-value:
               
3.00018e-42
               

               
Alignm gaps (pig, cow):
               
124, 0
               

               
Conread position:
               
13-337
               

               
Cow position:
               
chr18:44549226-44548909 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
327
               

               
Alignm identity:
               
225
               

               
Alignm E-value:
               
8.00001e-41
               

               
Alignm gaps (pig, cow):
               
222, 15
               

               
Conread position:
               
14-304
               

               
Cow position:
               
chr18:21195660-21195371 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
300
               

               
Alignm identity:
               
222
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
58, 195
               

               
Conread position:
               
14-426
               

               
Cow position:
               
chr18:52693153-52693553 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
416
               

               
Alignm identity:
               
261
               

               
Alignm E-value:
               
5e-26
               

               
Alignm gaps (pig, cow):
               
225, 58
               

               
Conread position:
               
14-428
               

               
Cow position:
               
chr18:31672824-31672414 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
423
               

               
Alignm identity:
               
305
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
172, 45
               

               
Conread position:
               
14-429
               

               
Cow position:
               
chr18:11183621-11184040 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
431
               

               
Alignm identity:
               
276
               

               
Alignm E-value:
               
7e-29
               

               
Alignm gaps (pig, cow):
               
131, 63
               

               
Conread position:
               
15-256
               

               
Cow position:
               
chr18:56361922-56361674 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
251
               

               
Alignm identity:
               
186
               

               
Alignm E-value:
               
7e-40
               

               
Alignm gaps (pig, cow):
               
58, 185
               

               
Conread position:
               
15-260
               

               
Cow position:
               
chr18:26286595-26286843 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
254
               

               
Alignm identity:
               
191
               

               
Alignm E-value:
               
3.00018e-42
               

               
Alignm gaps (pig, cow):
               
109, 9
               

               
Conread position:
               
15-404
               

               
Cow position:
               
chr18:50082557-50082182 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
400
               

               
Alignm identity:
               
278
               

               
Alignm E-value:
               
3.00018e-42
               

               
Alignm gaps (pig, cow):
               
59, 13
               

               
Conread position:
               
16-284
               

               
Cow position:
               
chr18:7947056-7947346 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
291
               

               
Alignm identity:
               
213
               

               
Alignm E-value:
               
8.00001e-41
               

               
Alignm gaps (pig, cow):
               
97, 0
               

               
Conread position:
               
16-384
               

               
Cow position:
               
chr18:4380976-4381347 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
381
               

               
Alignm identity:
               
252
               

               
Alignm E-value:
               
1e-32
               

               
Alignm gaps (pig, cow):
               
136, 37
               

               
Conread position:
               
16-453
               

               
Cow position:
               
chr18:21103076-21102651 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
449
               

               
Alignm identity:
               
302
               

               
Alignm E-value:
               
9.00054e-42
               

               
Alignm gaps (pig, cow):
               
62, 10
               

               
Conread position:
               
16-520
               

               
Cow position:
               
chr18:10656127-10656616 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
517
               

               
Alignm identity:
               
361
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
129, 58
               

               
Conread position:
               
17-263
               

               
Cow position:
               
chr18:13359748-13360000 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
260
               

               
Alignm identity:
               
206
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
128, 17
               

               
Conread position:
               
17-276
               

               
Cow position:
               
chr18:3133060-3132805 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
262
               

               
Alignm identity:
               
188
               

               
Alignm E-value:
               
2e-38
               

               
Alignm gaps (pig, cow):
               
236, 65
               

               
Conread position:
               
17-422
               

               
Cow position:
               
chr18:20641803-20641403 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
413
               

               
Alignm identity:
               
274
               

               
Alignm E-value:
               
9.00054e-42
               

               
Alignm gaps (pig, cow):
               
194, 216
               

               
Conread position:
               
18-230
               

               
Cow position:
               
chr18:26391370-26391584 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
218
               

               
Alignm identity:
               
149
               

               
Alignm E-value:
               
3e-22
               

               
Alignm gaps (pig, cow):
               
56, 184
               

               
Conread position:
               
19-221
               

               
Cow position:
               
chr18:1733507-1733301 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
208
               

               
Alignm identity:
               
157
               

               
Alignm E-value:
               
5e-37
               

               
Alignm gaps (pig, cow):
               
115, 55
               

               
Conread position:
               
19-274
               

               
Cow position:
               
chr18:35552077-35551813 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
267
               

               
Alignm identity:
               
186
               

               
Alignm E-value:
               
3e-31
               

               
Alignm gaps (pig, cow):
               
126, 225
               

               
Conread position:
               
20-197
               

               
Cow position:
               
chr18:5742750-5742568 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
185
               

               
Alignm identity:
               
136
               

               
Alignm E-value:
               
1e-25
               

               
Alignm gaps (pig, cow):
               
97, 10
               

               
Conread position:
               
20-220
               

               
Cow position:
               
chr18:54513822-54514019 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
201
               

               
Alignm identity:
               
138
               

               
Alignm E-value:
               
4e-24
               

               
Alignm gaps (pig, cow):
               
15, 0
               

               
Conread position:
               
20-227
               

               
Cow position:
               
chr18:27388239-27388451 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
218
               

               
Alignm identity:
               
169
               

               
Alignm E-value:
               
2e-37
               

               
Alignm gaps (pig, cow):
               
116, 16
               

               
Conread position:
               
20-275
               

               
Cow position:
               
chr18:38344489-38344754 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
272
               

               
Alignm identity:
               
187
               

               
Alignm E-value:
               
4e-23
               

               
Alignm gaps (pig, cow):
               
8, 16
               

               
Conread position:
               
21-404
               

               
Cow position:
               
chr18:12113681-12113290 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
396
               

               
Alignm identity:
               
259
               

               
Alignm E-value:
               
5e-36
               

               
Alignm gaps (pig, cow):
               
222, 84
               

               
Conread position:
               
22-191
               

               
Cow position:
               
chr18:44484071-44483893 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
180
               

               
Alignm identity:
               
138
               

               
Alignm E-value:
               
7e-29
               

               
Alignm gaps (pig, cow):
               
121, 67
               

               
Conread position:
               
22-272
               

               
Cow position:
               
chr18:45572791-45573053 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
270
               

               
Alignm identity:
               
195
               

               
Alignm E-value:
               
2e-28
               

               
Alignm gaps (pig, cow):
               
20, 6
               

               
Conread position:
               
22-274
               

               
Cow position:
               
chr18:36445119-36445384 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
269
               

               
Alignm identity:
               
207
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
100, 159
               

               
Conread position:
               
23-270
               

               
Cow position:
               
chr18:35827726-35827467 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
262
               

               
Alignm identity:
               
192
               

               
Alignm E-value:
               
5e-36
               

               
Alignm gaps (pig, cow):
               
114, 9
               

               
Conread position:
               
23-428
               

               
Cow position:
               
chr18:54572610-54572190 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
429
               

               
Alignm identity:
               
285
               

               
Alignm E-value:
               
1e-34
               

               
Alignm gaps (pig, cow):
               
8, 102
               

               
Conread position:
               
25-191
               

               
Cow position:
               
chr18:21095262-21095097 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
168
               

               
Alignm identity:
               
123
               

               
Alignm E-value:
               
1e-25
               

               
Alignm gaps (pig, cow):
               
12, 29
               

               
Conread position:
               
26-230
               

               
Cow position:
               
chr18:15172724-15172934 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
212
               

               
Alignm identity:
               
157
               

               
Alignm E-value:
               
3e-33
               

               
Alignm gaps (pig, cow):
               
127, 56
               

               
Conread position:
               
26-260
               

               
Cow position:
               
chr18:24022075-24022309 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
242
               

               
Alignm identity:
               
189
               

               
Alignm E-value:
               
1.4013e-45
               

               
Alignm gaps (pig, cow):
               
22, 12
               

               
Conread position:
               
26-273
               

               
Cow position:
               
chr18:48036471-48036724 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
258
               

               
Alignm identity:
               
175
               

               
Alignm E-value:
               
1e-24
               

               
Alignm gaps (pig, cow):
               
23, 52
               

               
Conread position:
               
26-427
               

               
Cow position:
               
chr18:23447395-23446964 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
433
               

               
Alignm identity:
               
303
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
14, 417
               

               
Conread position:
               
29-420
               

               
Cow position:
               
chr18:29356938-29356533 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
411
               

               
Alignm identity:
               
282
               

               
Alignm E-value:
               
9.80909e-45
               

               
Alignm gaps (pig, cow):
               
6, 48
               

               
Conread position:
               
32-328
               

               
Cow position:
               
chr18:4858212-4857899 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
315
               

               
Alignm identity:
               
205
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
53, 98
               

               
Conread position:
               
33-267
               

               
Cow position:
               
chr18:16044456-16044214 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
246
               

               
Alignm identity:
               
166
               

               
Alignm E-value:
               
3e-21
               

               
Alignm gaps (pig, cow):
               
93, 132
               

               
Conread position:
               
34-427
               

               
Cow position:
               
chr18:3115159-3115551 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
411
               

               
Alignm identity:
               
289
               

               
Alignm E-value:
               
1.4013e-45
               

               
Alignm gaps (pig, cow):
               
114, 40
               

               
Conread position:
               
34-525
               

               
Cow position:
               
chr18:39875561-39875078 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
506
               

               
Alignm identity:
               
355
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
16, 80
               

               
Conread position:
               
35-274
               

               
Cow position:
               
chr18:52658119-52658357 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
244
               

               
Alignm identity:
               
191
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
9, 79
               

               
Conread position:
               
35-368
               

               
Cow position:
               
chr18:19143816-19143472 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
354
               

               
Alignm identity:
               
240
               

               
Alignm E-value:
               
3e-30
               

               
Alignm gaps (pig, cow):
               
110, 39
               

               
Conread position:
               
35-387
               

               
Cow position:
               
chr18:21175880-21176244 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
371
               

               
Alignm identity:
               
245
               

               
Alignm E-value:
               
7e-29
               

               
Alignm gaps (pig, cow):
               
33, 273
               

               
Conread position:
               
36-222
               

               
Cow position:
               
chr18:3422421-3422614 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
194
               

               
Alignm identity:
               
148
               

               
Alignm E-value:
               
1e-33
               

               
Alignm gaps (pig, cow):
               
92, 0
               

               
Conread position:
               
36-228
               

               
Cow position:
               
chr18:54029568-54029769 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
203
               

               
Alignm identity:
               
151
               

               
Alignm E-value:
               
2e-29
               

               
Alignm gaps (pig, cow):
               
109, 29
               

               
Conread position:
               
36-250
               

               
Cow position:
               
chr18:5646951-5647171 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
225
               

               
Alignm identity:
               
171
               

               
Alignm E-value:
               
2e-37
               

               
Alignm gaps (pig, cow):
               
109, 41
               

               
Conread position:
               
36-260
               

               
Cow position:
               
chr18:46048466-46048692 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
231
               

               
Alignm identity:
               
170
               

               
Alignm E-value:
               
4e-35
               

               
Alignm gaps (pig, cow):
               
119, 24
               

               
Conread position:
               
36-260
               

               
Cow position:
               
chr18:47931159-47930932 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
228
               

               
Alignm identity:
               
170
               

               
Alignm E-value:
               
9.00054e-42
               

               
Alignm gaps (pig, cow):
               
102, 0
               

               
Conread position:
               
36-268
               

               
Cow position:
               
chr18:4649034-4648802 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
236
               

               
Alignm identity:
               
170
               

               
Alignm E-value:
               
5e-36
               

               
Alignm gaps (pig, cow):
               
150, 95
               

               
Conread position:
               
36-275
               

               
Cow position:
               
chr18:11680421-11680670 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
252
               

               
Alignm identity:
               
186
               

               
Alignm E-value:
               
2e-37
               

               
Alignm gaps (pig, cow):
               
100, 241
               

               
Conread position:
               
36-281
               

               
Cow position:
               
chr18:43463706-43463451 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
256
               

               
Alignm identity:
               
171
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
44, 0
               

               
Conread position:
               
36-397
               

               
Cow position:
               
chr18:51211883-51212250 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
380
               

               
Alignm identity:
               
259
               

               
Alignm E-value:
               
4e-34
               

               
Alignm gaps (pig, cow):
               
60, 38
               

               
Conread position:
               
36-420
               

               
Cow position:
               
chr18:33157522-33157906 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
393
               

               
Alignm identity:
               
267
               

               
Alignm E-value:
               
9.94922e-44
               

               
Alignm gaps (pig, cow):
               
119, 181
               

               
Conread position:
               
36-430
               

               
Cow position:
               
chr18:20271319-20270913 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
413
               

               
Alignm identity:
               
278
               

               
Alignm E-value:
               
3.00004e-41
               

               
Alignm gaps (pig, cow):
               
111, 230
               

               
Conread position:
               
36-523
               

               
Cow position:
               
chr18:25647548-25647053 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
505
               

               
Alignm identity:
               
359
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
109, 38
               

               
Conread position:
               
37-358
               

               
Cow position:
               
chr18:4369078-4368751 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
334
               

               
Alignm identity:
               
224
               

               
Alignm E-value:
               
3e-32
               

               
Alignm gaps (pig, cow):
               
97, 203
               

               
Conread position:
               
38-263
               

               
Cow position:
               
chr18:11166682-11166917 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
236
               

               
Alignm identity:
               
181
               

               
Alignm E-value:
               
2.99878e-43
               

               
Alignm gaps (pig, cow):
               
115, 0
               

               
Conread position:
               
38-286
               

               
Cow position:
               
chr18:23808170-23807912 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
259
               

               
Alignm identity:
               
195
               

               
Alignm E-value:
               
1.4013e-45
               

               
Alignm gaps (pig, cow):
               
115, 0
               

               
Conread position:
               
38-324
               

               
Cow position:
               
chr18:52632702-52632417 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
299
               

               
Alignm identity:
               
214
               

               
Alignm E-value:
               
4e-35
               

               
Alignm gaps (pig, cow):
               
30, 160
               

               
Conread position:
               
38-424
               

               
Cow position:
               
chr18:5766132-5766508 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
394
               

               
Alignm identity:
               
268
               

               
Alignm E-value:
               
3.00018e-42
               

               
Alignm gaps (pig, cow):
               
201, 99
               

               
Conread position:
               
39-289
               

               
Cow position:
               
chr18:9557685-9557943 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
264
               

               
Alignm identity:
               
188
               

               
Alignm E-value:
               
3e-31
               

               
Alignm gaps (pig, cow):
               
106, 34
               

               
Conread position:
               
39-393
               

               
Cow position:
               
chr18:42455316-42454959 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
367
               

               
Alignm identity:
               
254
               

               
Alignm E-value:
               
1.00053e-42
               

               
Alignm gaps (pig, cow):
               
109, 56
               

               
Conread position:
               
39-424
               

               
Cow position:
               
chr18:56159169-56159556 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
397
               

               
Alignm identity:
               
286
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
118, 55
               

               
Conread position:
               
39-437
               

               
Cow position:
               
chr18:1144489-1144079 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
422
               

               
Alignm identity:
               
284
               

               
Alignm E-value:
               
2e-36
               

               
Alignm gaps (pig, cow):
               
106, 35
               

               
Conread position:
               
40-427
               

               
Cow position:
               
chr18:42479874-42479489 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
405
               

               
Alignm identity:
               
270
               

               
Alignm E-value:
               
2e-29
               

               
Alignm gaps (pig, cow):
               
105, 5
               

               
Conread position:
               
40-518
               

               
Cow position:
               
chr18:42747301-42747759 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
491
               

               
Alignm identity:
               
324
               

               
Alignm E-value:
               
5e-36
               

               
Alignm gaps (pig, cow):
               
113, 34
               

               
Conread position:
               
41-430
               

               
Cow position:
               
chr18:50381963-50382347 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
401
               

               
Alignm identity:
               
277
               

               
Alignm E-value:
               
4.06377e-44
               

               
Alignm gaps (pig, cow):
               
74, 171
               

               
Conread position:
               
42-229
               

               
Cow position:
               
chr18:39115437-39115239 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
199
               

               
Alignm identity:
               
153
               

               
Alignm E-value:
               
1e-34
               

               
Alignm gaps (pig, cow):
               
103, 0
               

               
Conread position:
               
42-260
               

               
Cow position:
               
chr18:49655422-49655633 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
219
               

               
Alignm identity:
               
166
               

               
Alignm E-value:
               
2e-38
               

               
Alignm gaps (pig, cow):
               
39, 0
               

               
Conread position:
               
42-266
               

               
Cow position:
               
chr18:16847405-16847632 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
230
               

               
Alignm identity:
               
171
               

               
Alignm E-value:
               
2e-37
               

               
Alignm gaps (pig, cow):
               
77, 102
               

               
Conread position:
               
42-270
               

               
Cow position:
               
chr18:23476963-23476746 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
233
               

               
Alignm identity:
               
165
               

               
Alignm E-value:
               
4e-24
               

               
Alignm gaps (pig, cow):
               
112, 23
               

               
Conread position:
               
42-270
               

               
Cow position:
               
chr18:55789285-55789049 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
238
               

               
Alignm identity:
               
176
               

               
Alignm E-value:
               
6e-38
               

               
Alignm gaps (pig, cow):
               
103, 197
               

               
Conread position:
               
42-396
               

               
Cow position:
               
chr18:32873290-32873658 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
377
               

               
Alignm identity:
               
262
               

               
Alignm E-value:
               
7e-40
               

               
Alignm gaps (pig, cow):
               
103, 177
               

               
Conread position:
               
42-524
               

               
Cow position:
               
chr18:36231004-36230540 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
487
               

               
Alignm identity:
               
313
               

               
Alignm E-value:
               
2e-37
               

               
Alignm gaps (pig, cow):
               
196, 72
               

               
Conread position:
               
43-226
               

               
Cow position:
               
chr18:31082612-31082433 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
185
               

               
Alignm identity:
               
132
               

               
Alignm E-value:
               
4e-23
               

               
Alignm gaps (pig, cow):
               
91, 58
               

               
Conread position:
               
43-237
               

               
Cow position:
               
chr18:52460150-52459958 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
195
               

               
Alignm identity:
               
133
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
74, 0
               

               
Conread position:
               
44-205
               

               
Cow position:
               
chr18:11694989-11695154 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
169
               

               
Alignm identity:
               
130
               

               
Alignm E-value:
               
6e-27
               

               
Alignm gaps (pig, cow):
               
52, 39
               

               
Conread position:
               
44-266
               

               
Cow position:
               
chr18:268102-267877 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
227
               

               
Alignm identity:
               
175
               

               
Alignm E-value:
               
4.2039e-45
               

               
Alignm gaps (pig, cow):
               
113, 77
               

               
Conread position:
               
44-421
               

               
Cow position:
               
chr18:18919244-18918870 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
386
               

               
Alignm identity:
               
265
               

               
Alignm E-value:
               
4.2039e-45
               

               
Alignm gaps (pig, cow):
               
136, 158
               

               
Conread position:
               
44-437
               

               
Cow position:
               
chr18:15614135-15613754 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
399
               

               
Alignm identity:
               
264
               

               
Alignm E-value:
               
4e-35
               

               
Alignm gaps (pig, cow):
               
301, 15
               

               
Conread position:
               
45-187
               

               
Cow position:
               
chr18:18445399-18445258 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
145
               

               
Alignm identity:
               
110
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
112, 36
               

               
Conread position:
               
45-270
               

               
Cow position:
               
chr18:31586654-31586425 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
233
               

               
Alignm identity:
               
175
               

               
Alignm E-value:
               
6e-38
               

               
Alignm gaps (pig, cow):
               
104, 39
               

               
Conread position:
               
45-275
               

               
Cow position:
               
chr18:54658011-54658257 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
249
               

               
Alignm identity:
               
184
               

               
Alignm E-value:
               
3e-33
               

               
Alignm gaps (pig, cow):
               
26, 68
               

               
Conread position:
               
45-422
               

               
Cow position:
               
chr18:38985397-38985791 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
400
               

               
Alignm identity:
               
268
               

               
Alignm E-value:
               
1e-35
               

               
Alignm gaps (pig, cow):
               
100, 220
               

               
Conread position:
               
45-460
               

               
Cow position:
               
chr18:39434550-39434954 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
421
               

               
Alignm identity:
               
270
               

               
Alignm E-value:
               
3e-30
               

               
Alignm gaps (pig, cow):
               
295, 54
               

               
Conread position:
               
46-216
               

               
Cow position:
               
chr18:56163298-56163474 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
177
               

               
Alignm identity:
               
132
               

               
Alignm E-value:
               
2e-28
               

               
Alignm gaps (pig, cow):
               
107, 0
               

               
Conread position:
               
46-290
               

               
Cow position:
               
chr18:1587080-1586840 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
250
               

               
Alignm identity:
               
182
               

               
Alignm E-value:
               
1e-33
               

               
Alignm gaps (pig, cow):
               
9, 87
               

               
Conread position:
               
46-296
               

               
Cow position:
               
chr18:33407322-33407585 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
266
               

               
Alignm identity:
               
187
               

               
Alignm E-value:
               
2e-29
               

               
Alignm gaps (pig, cow):
               
99, 28
               

               
Conread position:
               
46-384
               

               
Cow position:
               
chr18:28924121-28923793 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
348
               

               
Alignm identity:
               
241
               

               
Alignm E-value:
               
5e-36
               

               
Alignm gaps (pig, cow):
               
28, 49
               

               
Conread position:
               
46-437
               

               
Cow position:
               
chr18:55498777-55499180 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
413
               

               
Alignm identity:
               
279
               

               
Alignm E-value:
               
2e-37
               

               
Alignm gaps (pig, cow):
               
101, 27
               

               
Conread position:
               
47-258
               

               
Cow position:
               
chr18:25282843-25282622 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
222
               

               
Alignm identity:
               
170
               

               
Alignm E-value:
               
7e-40
               

               
Alignm gaps (pig, cow):
               
67, 0
               

               
Conread position:
               
47-396
               

               
Cow position:
               
chr18:43806163-43806518 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
363
               

               
Alignm identity:
               
245
               

               
Alignm E-value:
               
2e-36
               

               
Alignm gaps (pig, cow):
               
98, 230
               

               
Conread position:
               
48-377
               

               
Cow position:
               
chr18:36097914-36098259 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
347
               

               
Alignm identity:
               
243
               

               
Alignm E-value:
               
2.99878e-43
               

               
Alignm gaps (pig, cow):
               
67, 29
               

               
Conread position:
               
48-428
               

               
Cow position:
               
chr18:21192697-21192314 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
398
               

               
Alignm identity:
               
271
               

               
Alignm E-value:
               
2e-37
               

               
Alignm gaps (pig, cow):
               
33, 90
               

               
Conread position:
               
49-384
               

               
Cow position:
               
chr18:5578018-5578361 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
351
               

               
Alignm identity:
               
235
               

               
Alignm E-value:
               
3e-30
               

               
Alignm gaps (pig, cow):
               
96, 18
               

               
Conread position:
               
53-228
               

               
Cow position:
               
chr18:18976802-18976988 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
189
               

               
Alignm identity:
               
145
               

               
Alignm E-value:
               
2e-29
               

               
Alignm gaps (pig, cow):
               
82, 175
               

               
Conread position:
               
53-404
               

               
Cow position:
               
chr18:56183656-56184010 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
369
               

               
Alignm identity:
               
247
               

               
Alignm E-value:
               
6e-27
               

               
Alignm gaps (pig, cow):
               
92, 19
               

               
Conread position:
               
53-424
               

               
Cow position:
               
chr18:51656335-51655948 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
394
               

               
Alignm identity:
               
261
               

               
Alignm E-value:
               
3e-32
               

               
Alignm gaps (pig, cow):
               
87, 226
               

               
Conread position:
               
54-301
               

               
Cow position:
               
chr18:52864597-52864340 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
262
               

               
Alignm identity:
               
182
               

               
Alignm E-value:
               
6e-27
               

               
Alignm gaps (pig, cow):
               
91, 215
               

               
Conread position:
               
54-524
               

               
Cow position:
               
chr18:33523950-33524417 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
488
               

               
Alignm identity:
               
318
               

               
Alignm E-value:
               
4e-34
               

               
Alignm gaps (pig, cow):
               
98, 110
               

               
Conread position:
               
56-384
               

               
Cow position:
               
chr18:11691689-11691355 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
342
               

               
Alignm identity:
               
236
               

               
Alignm E-value:
               
6e-38
               

               
Alignm gaps (pig, cow):
               
80, 16
               

               
Conread position:
               
58-422
               

               
Cow position:
               
chr18:30794157-30794519 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
374
               

               
Alignm identity:
               
253
               

               
Alignm E-value:
               
7e-40
               

               
Alignm gaps (pig, cow):
               
96, 178
               

               
Conread position:
               
59-424
               

               
Cow position:
               
chr18:2592449-2592071 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
382
               

               
Alignm identity:
               
268
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
101, 214
               

               
Conread position:
               
60-229
               

               
Cow position:
               
chr18:5711943-5711767 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
177
               

               
Alignm identity:
               
138
               

               
Alignm E-value:
               
1e-32
               

               
Alignm gaps (pig, cow):
               
15, 0
               

               
Conread position:
               
64-428
               

               
Cow position:
               
chr18:48453422-48453773 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
373
               

               
Alignm identity:
               
255
               

               
Alignm E-value:
               
5e-36
               

               
Alignm gaps (pig, cow):
               
72, 173
               

               
Conread position:
               
65-400
               

               
Cow position:
               
chr18:4628764-4629112 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
354
               

               
Alignm identity:
               
229
               

               
Alignm E-value:
               
1e-23
               

               
Alignm gaps (pig, cow):
               
83, 37
               

               
Conread position:
               
67-204
               

               
Cow position:
               
chr18:52402785-52402641 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
146
               

               
Alignm identity:
               
115
               

               
Alignm E-value:
               
4e-24
               

               
Alignm gaps (pig, cow):
               
75, 9
               

               
Conread position:
               
67-278
               

               
Cow position:
               
chr18:19761430-19761648 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
223
               

               
Alignm identity:
               
162
               

               
Alignm E-value:
               
7e-29
               

               
Alignm gaps (pig, cow):
               
78, 172
               

               
Conread position:
               
67-396
               

               
Cow position:
               
chr18:7952378-7952704 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
343
               

               
Alignm identity:
               
230
               

               
Alignm E-value:
               
6e-28
               

               
Alignm gaps (pig, cow):
               
80, 176
               

               
Conread position:
               
68-259
               

               
Cow position:
               
chr18:21768360-21768563 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
204
               

               
Alignm identity:
               
154
               

               
Alignm E-value:
               
3e-31
               

               
Alignm gaps (pig, cow):
               
77, 0
               

               
Conread position:
               
72-275
               

               
Cow position:
               
chr18:7058966-7059167 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
211
               

               
Alignm identity:
               
151
               

               
Alignm E-value:
               
4e-23
               

               
Alignm gaps (pig, cow):
               
11, 140
               

               
Conread position:
               
73-263
               

               
Cow position:
               
chr18:10322538-10322741 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
204
               

               
Alignm identity:
               
144
               

               
Alignm E-value:
               
3e-22
               

               
Alignm gaps (pig, cow):
               
72, 0
               

               
Conread position:
               
73-263
               

               
Cow position:
               
chr18:35582364-35582165 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
200
               

               
Alignm identity:
               
152
               

               
Alignm E-value:
               
4e-34
               

               
Alignm gaps (pig, cow):
               
81, 0
               

               
Conread position:
               
74-319
               

               
Cow position:
               
chr18:24946076-24945820 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
262
               

               
Alignm identity:
               
182
               

               
Alignm E-value:
               
4e-24
               

               
Alignm gaps (pig, cow):
               
15, 166
               

               
Conread position:
               
74-392
               

               
Cow position:
               
chr18:37382359-37382031 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
335
               

               
Alignm identity:
               
230
               

               
Alignm E-value:
               
1e-33
               

               
Alignm gaps (pig, cow):
               
66, 218
               

               
Conread position:
               
75-273
               

               
Cow position:
               
chr18:12023893-12023689 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
205
               

               
Alignm identity:
               
148
               

               
Alignm E-value:
               
2e-29
               

               
Alignm gaps (pig, cow):
               
74, 0
               

               
Conread position:
               
76-426
               

               
Cow position:
               
chr18:42432349-42431992 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
362
               

               
Alignm identity:
               
232
               

               
Alignm E-value:
               
6e-27
               

               
Alignm gaps (pig, cow):
               
15, 81
               

               
Conread position:
               
78-387
               

               
Cow position:
               
chr18:22411874-22411554 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
325
               

               
Alignm identity:
               
213
               

               
Alignm E-value:
               
4e-23
               

               
Alignm gaps (pig, cow):
               
72, 205
               

               
Conread position:
               
80-261
               

               
Cow position:
               
chr18:1588858-1588677 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
185
               

               
Alignm identity:
               
130
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
155, 54
               

               
Conread position:
               
87-266
               

               
Cow position:
               
chr18:25984822-25984631 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
192
               

               
Alignm identity:
               
143
               

               
Alignm E-value:
               
2e-26
               

               
Alignm gaps (pig, cow):
               
7, 0
               

               
Conread position:
               
87-273
               

               
Cow position:
               
chr18:21205118-21205308 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
191
               

               
Alignm identity:
               
139
               

               
Alignm E-value:
               
2e-29
               

               
Alignm gaps (pig, cow):
               
70, 0
               

               
Conread position:
               
87-366
               

               
Cow position:
               
chr18:32883053-32883340 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
295
               

               
Alignm identity:
               
203
               

               
Alignm E-value:
               
6e-28
               

               
Alignm gaps (pig, cow):
               
49, 190
               

               
Conread position:
               
88-332
               

               
Cow position:
               
chr18:20482121-20481884 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
253
               

               
Alignm identity:
               
178
               

               
Alignm E-value:
               
4e-23
               

               
Alignm gaps (pig, cow):
               
50, 113
               

               
Conread position:
               
88-420
               

               
Cow position:
               
chr18:48713306-48713642 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
342
               

               
Alignm identity:
               
222
               

               
Alignm E-value:
               
7e-29
               

               
Alignm gaps (pig, cow):
               
70, 169
               

               
Conread position:
               
91-270
               

               
Cow position:
               
chr18:12809615-12809800 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
187
               

               
Alignm identity:
               
131
               

               
Alignm E-value:
               
9e-21
               

               
Alignm gaps (pig, cow):
               
53, 181
               

               
Conread position:
               
92-275
               

               
Cow position:
               
chr18:219089-219281 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
194
               

               
Alignm identity:
               
150
               

               
Alignm E-value:
               
3e-33
               

               
Alignm gaps (pig, cow):
               
61, 184
               

               
Conread position:
               
94-396
               

               
Cow position:
               
chr18:52854824-52855121 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
311
               

               
Alignm identity:
               
211
               

               
Alignm E-value:
               
2e-28
               

               
Alignm gaps (pig, cow):
               
43, 62
               

               
Conread position:
               
94-534
               

               
Cow position:
               
chr18:33007815-33008261 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
462
               

               
Alignm identity:
               
299
               

               
Alignm E-value:
               
8e-30
               

               
Alignm gaps (pig, cow):
               
51, 179
               

               
Conread position:
               
96-258
               

               
Cow position:
               
chr18:24636275-24636431 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
164
               

               
Alignm identity:
               
124
               

               
Alignm E-value:
               
4e-24
               

               
Alignm gaps (pig, cow):
               
49, 58
               

               
Conread position:
               
97-260
               

               
Cow position:
               
chr18:43020629-43020465 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
170
               

               
Alignm identity:
               
129
               

               
Alignm E-value:
               
4e-24
               

               
Alignm gaps (pig, cow):
               
8, 97
               

               
Conread position:
               
98-369
               

               
Cow position:
               
chr18:48829024-48828738 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
287
               

               
Alignm identity:
               
193
               

               
Alignm E-value:
               
6e-27
               

               
Alignm gaps (pig, cow):
               
38, 0
               

               
Conread position:
               
103-269
               

               
Cow position:
               
chr18:28823201-28823025 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
177
               

               
Alignm identity:
               
136
               

               
Alignm E-value:
               
2e-29
               

               
Alignm gaps (pig, cow):
               
50, 0
               

               
Conread position:
               
103-270
               

               
Cow position:
               
chr18:14872098-14871925 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
176
               

               
Alignm identity:
               
129
               

               
Alignm E-value:
               
3e-22
               

               
Alignm gaps (pig, cow):
               
42, 123
               

               
Conread position:
               
103-272
               

               
Cow position:
               
chr18:15340672-15340501 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
173
               

               
Alignm identity:
               
130
               

               
Alignm E-value:
               
2e-29
               

               
Alignm gaps (pig, cow):
               
137, 51
               

               
Conread position:
               
103-396
               

               
Cow position:
               
chr18:41005296-41005012 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
299
               

               
Alignm identity:
               
200
               

               
Alignm E-value:
               
1e-23
               

               
Alignm gaps (pig, cow):
               
55, 168
               

               
Conread position:
               
103-423
               

               
Cow position:
               
chr18:33896655-33896324 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
336
               

               
Alignm identity:
               
232
               

               
Alignm E-value:
               
5e-36
               

               
Alignm gaps (pig, cow):
               
49, 100
               

               
Conread position:
               
103-428
               

               
Cow position:
               
chr18:10977443-10977112 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
340
               

               
Alignm identity:
               
218
               

               
Alignm E-value:
               
3e-21
               

               
Alignm gaps (pig, cow):
               
42, 137
               

               
Conread position:
               
104-426
               

               
Cow position:
               
chr18:4496119-4495789 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
338
               

               
Alignm identity:
               
229
               

               
Alignm E-value:
               
8e-31
               

               
Alignm gaps (pig, cow):
               
44, 157
               

               
Conread position:
               
108-404
               

               
Cow position:
               
chr18:2864226-2863915 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
314
               

               
Alignm identity:
               
206
               

               
Alignm E-value:
               
4e-23
               

               
Alignm gaps (pig, cow):
               
45, 170
               

               
Conread position:
               
113-263
               

               
Cow position:
               
chr18:18815895-18815737 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
159
               

               
Alignm identity:
               
118
               

               
Alignm E-value:
               
3e-22
               

               
Alignm gaps (pig, cow):
               
44, 0
               

               
Conread position:
               
118-274
               

               
Cow position:
               
chr18:47812253-47812416 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
165
               

               
Alignm identity:
               
121
               

               
Alignm E-value:
               
3e-21
               

               
Alignm gaps (pig, cow):
               
23, 5
               

               
Conread position:
               
126-342
               

               
Cow position:
               
chr18:6103299-6103089 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
219
               

               
Alignm identity:
               
153
               

               
Alignm E-value:
               
1e-23
               

               
Alignm gaps (pig, cow):
               
8, 25
               

               
Conread position:
               
126-428
               

               
Cow position:
               
chr18:3211668-3211978 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
315
               

               
Alignm identity:
               
219
               

               
Alignm E-value:
               
1e-35
               

               
Alignm gaps (pig, cow):
               
25, 29
               

               
Conread position:
               
126-525
               

               
Cow position:
               
chr18:1954794-1954413 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
407
               

               
Alignm identity:
               
281
               

               
Alignm E-value:
               
8.00001e-41
               

               
Alignm gaps (pig, cow):
               
31, 8
               

               
Conread position:
               
135-446
               

               
Cow position:
               
chr18:16686531-16686222 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
319
               

               
Alignm identity:
               
222
               

               
Alignm E-value:
               
6e-38
               

               
Alignm gaps (pig, cow):
               
100, 132
               

               
Conread position:
               
136-422
               

               
Cow position:
               
chr18:5072606-5072317 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
294
               

               
Alignm identity:
               
191
               

               
Alignm E-value:
               
1e-23
               

               
Alignm gaps (pig, cow):
               
103, 73
               

               
Conread position:
               
136-516
               

               
Cow position:
               
chr18:19896651-19896266 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
392
               

               
Alignm identity:
               
267
               

               
Alignm E-value:
               
9.80909e-45
               

               
Alignm gaps (pig, cow):
               
21, 134
               

               
Conread position:
               
141-396
               

               
Cow position:
               
chr18:7108937-7109196 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
265
               

               
Alignm identity:
               
183
               

               
Alignm E-value:
               
6e-28
               

               
Alignm gaps (pig, cow):
               
9, 130
               

               
Conread position:
               
141-505
               

               
Cow position:
               
chr18:8299825-8300186 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
374
               

               
Alignm identity:
               
237
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
71, 142
               

               
Conread position:
               
141-560
               

               
Cow position:
               
chr18:27109485-27109053 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
441
               

               
Alignm identity:
               
288
               

               
Alignm E-value:
               
1e-33
               

               
Alignm gaps (pig, cow):
               
45, 128
               

               
Conread position:
               
143-508
               

               
Cow position:
               
chr18:46276497-46276125 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
379
               

               
Alignm identity:
               
243
               

               
Alignm E-value:
               
2e-26
               

               
Alignm gaps (pig, cow):
               
14, 118
               

               
Conread position:
               
147-422
               

               
Cow position:
               
chr18:56191154-56190869 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
288
               

               
Alignm identity:
               
196
               

               
Alignm E-value:
               
6e-28
               

               
Alignm gaps (pig, cow):
               
20, 48
               

               
Conread position:
               
152-385
               

               
Cow position:
               
chr18:25601496-25601269 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
238
               

               
Alignm identity:
               
165
               

               
Alignm E-value:
               
1e-23
               

               
Alignm gaps (pig, cow):
               
16, 85
               

               
Conread position:
               
154-393
               

               
Cow position:
               
chr18:4330779-4331024 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
248
               

               
Alignm identity:
               
171
               

               
Alignm E-value:
               
2e-27
               

               
Alignm gaps (pig, cow):
               
31, 117
               

               
Conread position:
               
154-523
               

               
Cow position:
               
chr18:18369538-18369184 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
376
               

               
Alignm identity:
               
246
               

               
Alignm E-value:
               
6e-27
               

               
Alignm gaps (pig, cow):
               
84, 110
               

               
Conread position:
               
154-524
               

               
Cow position:
               
chr18:43555700-43555347 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
377
               

               
Alignm identity:
               
259
               

               
Alignm E-value:
               
2e-37
               

               
Alignm gaps (pig, cow):
               
84, 110
               

               
Conread position:
               
156-393
               

               
Cow position:
               
chr18:31125393-31125165 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
239
               

               
Alignm identity:
               
163
               

               
Alignm E-value:
               
1e-24
               

               
Alignm gaps (pig, cow):
               
83, 7
               

               
Conread position:
               
163-375
               

               
Cow position:
               
chr18:50974462-50974249 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
220
               

               
Alignm identity:
               
152
               

               
Alignm E-value:
               
9e-21
               

               
Alignm gaps (pig, cow):
               
24, 107
               

               
Conread position:
               
163-418
               

               
Cow position:
               
chr18:30586386-30586136 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
258
               

               
Alignm identity:
               
171
               

               
Alignm E-value:
               
4e-23
               

               
Alignm gaps (pig, cow):
               
173, 46
               

               
Conread position:
               
164-411
               

               
Cow position:
               
chr18:52704018-52703763 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
260
               

               
Alignm identity:
               
179
               

               
Alignm E-value:
               
5e-26
               

               
Alignm gaps (pig, cow):
               
21, 42
               

               
Conread position:
               
168-428
               

               
Cow position:
               
chr18:35873913-35874177 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
271
               

               
Alignm identity:
               
189
               

               
Alignm E-value:
               
2e-29
               

               
Alignm gaps (pig, cow):
               
14, 110
               

               
Conread position:
               
173-400
               

               
Cow position:
               
chr18:30225701-30225460 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
242
               

               
Alignm identity:
               
167
               

               
Alignm E-value:
               
4e-24
               

               
Alignm gaps (pig, cow):
               
12, 0
               

               
Conread position:
               
174-393
               

               
Cow position:
               
chr18:19687864-19688087 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
228
               

               
Alignm identity:
               
158
               

               
Alignm E-value:
               
1e-23
               

               
Alignm gaps (pig, cow):
               
10, 82
               

               
Conread position:
               
177-547
               

               
Cow position:
               
chr18:22274988-22274619 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
381
               

               
Alignm identity:
               
245
               

               
Alignm E-value:
               
2e-27
               

               
Alignm gaps (pig, cow):
               
61, 97
               

               
Conread position:
               
178-426
               

               
Cow position:
               
chr18:51643517-51643269 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
253
               

               
Alignm identity:
               
165
               

               
Alignm E-value:
               
3e-21
               

               
Alignm gaps (pig, cow):
               
160, 88
               

               
Conread position:
               
179-411
               

               
Cow position:
               
chr18:380782-381013 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
239
               

               
Alignm identity:
               
163
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
91, 53
               

               
Conread position:
               
179-425
               

               
Cow position:
               
chr18:16997102-16997350 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
255
               

               
Alignm identity:
               
174
               

               
Alignm E-value:
               
1e-24
               

               
Alignm gaps (pig, cow):
               
23, 46
               

               
Conread position:
               
179-426
               

               
Cow position:
               
chr18:5632115-5632365 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
255
               

               
Alignm identity:
               
169
               

               
Alignm E-value:
               
3e-22
               

               
Alignm gaps (pig, cow):
               
58, 89
               

               
Conread position:
               
180-400
               

               
Cow position:
               
chr18:51644172-51643948 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
227
               

               
Alignm identity:
               
155
               

               
Alignm E-value:
               
4e-23
               

               
Alignm gaps (pig, cow):
               
102, 51
               

               
Conread position:
               
186-428
               

               
Cow position:
               
chr18:10214339-10214091 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
252
               

               
Alignm identity:
               
172
               

               
Alignm E-value:
               
4e-25
               

               
Alignm gaps (pig, cow):
               
52, 96
               

               
Conread position:
               
187-430
               

               
Cow position:
               
chr18:49841136-49841378 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
247
               

               
Alignm identity:
               
168
               

               
Alignm E-value:
               
6e-27
               

               
Alignm gaps (pig, cow):
               
48, 76
               

               
Conread position:
               
198-524
               

               
Cow position:
               
chr18:47967055-47966720 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
343
               

               
Alignm identity:
               
232
               

               
Alignm E-value:
               
3e-32
               

               
Alignm gaps (pig, cow):
               
41, 70
               

               
Conread position:
               
316-548
               

               
Cow position:
               
chr18:4088447-4088682 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
239
               

               
Alignm identity:
               
166
               

               
Alignm E-value:
               
2e-28
               

               
Alignm gaps (pig, cow):
               
31, 24
               

               
Conread position:
               
346-534
               

               
Cow position:
               
chr18:49543606-49543797 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
192
               

               
Alignm identity:
               
131
               

               
Alignm E-value:
               
3e-21
               

               
Alignm gaps (pig, cow):
               
68, 0
               

               
Conread position:
               
406-531
               

               
Cow position:
               
chr18:40356894-40356771 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
126
               

               
Alignm identity:
               
98
               

               
Alignm E-value:
               
3e-22
               

               
Alignm gaps (pig, cow):
               
7, 0
               

               
Conread position:
               
408-524
               

               
Cow position:
               
chr18:45079214-45079098 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
117
               

               
Alignm identity:
               
90
               

               
Alignm E-value:
               
9e-21
               

               
Alignm gaps (pig, cow):
               
0, 0
               
Show alignments to all cow chromosomes.