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Cow genome map

           
Conread name:
           
Pig3-SRG8023H08
        

               
Conread position:
               
2-220
               

               
Cow position:
               
chr24:13173481-13173250 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
234
               

               
Alignm identity:
               
167
               

               
Alignm E-value:
               
4e-26
               

               
Alignm gaps (pig, cow):
               
42, 30
               

               
Conread position:
               
2-222
               

               
Cow position:
               
chr24:39123538-39123766 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
231
               

               
Alignm identity:
               
165
               

               
Alignm E-value:
               
2e-28
               

               
Alignm gaps (pig, cow):
               
29, 101
               

               
Conread position:
               
2-229
               

               
Cow position:
               
chr24:7001394-7001158 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
239
               

               
Alignm identity:
               
176
               

               
Alignm E-value:
               
1e-35
               

               
Alignm gaps (pig, cow):
               
70, 226
               

               
Conread position:
               
2-269
               

               
Cow position:
               
chr24:42007421-42007690 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
271
               

               
Alignm identity:
               
209
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
183, 72
               

               
Conread position:
               
2-281
               

               
Cow position:
               
chr24:22193400-22193687 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
292
               

               
Alignm identity:
               
208
               

               
Alignm E-value:
               
2e-38
               

               
Alignm gaps (pig, cow):
               
143, 232
               

               
Conread position:
               
2-396
               

               
Cow position:
               
chr24:11005337-11005749 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
418
               

               
Alignm identity:
               
276
               

               
Alignm E-value:
               
2e-32
               

               
Alignm gaps (pig, cow):
               
143, 275
               

               
Conread position:
               
2-422
               

               
Cow position:
               
chr24:15057066-15057496 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
442
               

               
Alignm identity:
               
300
               

               
Alignm E-value:
               
1.99965e-42
               

               
Alignm gaps (pig, cow):
               
33, 69
               

               
Conread position:
               
2-428
               

               
Cow position:
               
chr24:201958-201528 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
443
               

               
Alignm identity:
               
307
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
143, 81
               

               
Conread position:
               
2-430
               

               
Cow position:
               
chr24:11045872-11045453 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
438
               

               
Alignm identity:
               
282
               

               
Alignm E-value:
               
6e-30
               

               
Alignm gaps (pig, cow):
               
147, 26
               

               
Conread position:
               
3-182
               

               
Cow position:
               
chr24:15666734-15666545 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
190
               

               
Alignm identity:
               
150
               

               
Alignm E-value:
               
1e-36
               

               
Alignm gaps (pig, cow):
               
36, 0
               

               
Conread position:
               
3-195
               

               
Cow position:
               
chr24:30766549-30766751 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
204
               

               
Alignm identity:
               
145
               

               
Alignm E-value:
               
1e-23
               

               
Alignm gaps (pig, cow):
               
138, 71
               

               
Conread position:
               
3-198
               

               
Cow position:
               
chr24:38643312-38643516 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
206
               

               
Alignm identity:
               
148
               

               
Alignm E-value:
               
1e-25
               

               
Alignm gaps (pig, cow):
               
142, 71
               

               
Conread position:
               
3-204
               

               
Cow position:
               
chr24:15288533-15288743 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
212
               

               
Alignm identity:
               
163
               

               
Alignm E-value:
               
5e-38
               

               
Alignm gaps (pig, cow):
               
142, 202
               

               
Conread position:
               
3-206
               

               
Cow position:
               
chr24:37975394-37975186 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
214
               

               
Alignm identity:
               
155
               

               
Alignm E-value:
               
1e-26
               

               
Alignm gaps (pig, cow):
               
140, 79
               

               
Conread position:
               
3-228
               

               
Cow position:
               
chr24:634666-634892 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
228
               

               
Alignm identity:
               
168
               

               
Alignm E-value:
               
6e-40
               

               
Alignm gaps (pig, cow):
               
162, 71
               

               
Conread position:
               
3-228
               

               
Cow position:
               
chr24:29027728-29027951 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
230
               

               
Alignm identity:
               
163
               

               
Alignm E-value:
               
6e-30
               

               
Alignm gaps (pig, cow):
               
142, 25
               

               
Conread position:
               
3-235
               

               
Cow position:
               
chr24:5849731-5849484 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
252
               

               
Alignm identity:
               
176
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
39, 20
               

               
Conread position:
               
3-237
               

               
Cow position:
               
chr24:21264830-21264592 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
244
               

               
Alignm identity:
               
182
               

               
Alignm E-value:
               
2e-38
               

               
Alignm gaps (pig, cow):
               
146, 54
               

               
Conread position:
               
3-237
               

               
Cow position:
               
chr24:38374964-38375201 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
242
               

               
Alignm identity:
               
184
               

               
Alignm E-value:
               
2.99878e-43
               

               
Alignm gaps (pig, cow):
               
127, 25
               

               
Conread position:
               
3-252
               

               
Cow position:
               
chr24:19658223-19658490 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
268
               

               
Alignm identity:
               
207
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
55, 0
               

               
Conread position:
               
3-256
               

               
Cow position:
               
chr24:28332602-28332334 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
269
               

               
Alignm identity:
               
184
               

               
Alignm E-value:
               
1e-25
               

               
Alignm gaps (pig, cow):
               
34, 0
               

               
Conread position:
               
3-259
               

               
Cow position:
               
chr24:27720073-27719815 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
265
               

               
Alignm identity:
               
196
               

               
Alignm E-value:
               
1.99993e-41
               

               
Alignm gaps (pig, cow):
               
149, 20
               

               
Conread position:
               
3-259
               

               
Cow position:
               
chr24:43733646-43733911 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
267
               

               
Alignm identity:
               
189
               

               
Alignm E-value:
               
3e-35
               

               
Alignm gaps (pig, cow):
               
149, 29
               

               
Conread position:
               
3-260
               

               
Cow position:
               
chr24:40908692-40908963 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
273
               

               
Alignm identity:
               
207
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
140, 117
               

               
Conread position:
               
3-263
               

               
Cow position:
               
chr24:27267314-27267578 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
269
               

               
Alignm identity:
               
205
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
70, 25
               

               
Conread position:
               
3-263
               

               
Cow position:
               
chr24:27270471-27270727 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
268
               

               
Alignm identity:
               
193
               

               
Alignm E-value:
               
1e-34
               

               
Alignm gaps (pig, cow):
               
148, 33
               

               
Conread position:
               
3-263
               

               
Cow position:
               
chr24:27809855-27810131 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
277
               

               
Alignm identity:
               
196
               

               
Alignm E-value:
               
3e-35
               

               
Alignm gaps (pig, cow):
               
45, 0
               

               
Conread position:
               
3-266
               

               
Cow position:
               
chr24:38347355-38347632 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
279
               

               
Alignm identity:
               
220
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
65, 264
               

               
Conread position:
               
3-268
               

               
Cow position:
               
chr24:25677708-25677988 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
282
               

               
Alignm identity:
               
204
               

               
Alignm E-value:
               
1e-37
               

               
Alignm gaps (pig, cow):
               
45, 118
               

               
Conread position:
               
3-270
               

               
Cow position:
               
chr24:27543800-27543527 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
276
               

               
Alignm identity:
               
210
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
146, 255
               

               
Conread position:
               
3-270
               

               
Cow position:
               
chr24:34315035-34315305 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
274
               

               
Alignm identity:
               
208
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
154, 32
               

               
Conread position:
               
3-273
               

               
Cow position:
               
chr24:5435365-5435091 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
282
               

               
Alignm identity:
               
204
               

               
Alignm E-value:
               
1e-37
               

               
Alignm gaps (pig, cow):
               
144, 25
               

               
Conread position:
               
3-273
               

               
Cow position:
               
chr24:39219170-39218887 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
285
               

               
Alignm identity:
               
213
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
133, 73
               

               
Conread position:
               
3-274
               

               
Cow position:
               
chr24:39900645-39900367 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
280
               

               
Alignm identity:
               
185
               

               
Alignm E-value:
               
4e-27
               

               
Alignm gaps (pig, cow):
               
149, 63
               

               
Conread position:
               
3-276
               

               
Cow position:
               
chr24:37205200-37204920 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
284
               

               
Alignm identity:
               
203
               

               
Alignm E-value:
               
5e-38
               

               
Alignm gaps (pig, cow):
               
146, 47
               

               
Conread position:
               
3-281
               

               
Cow position:
               
chr24:37246542-37246245 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
299
               

               
Alignm identity:
               
219
               

               
Alignm E-value:
               
6.99949e-42
               

               
Alignm gaps (pig, cow):
               
142, 262
               

               
Conread position:
               
3-283
               

               
Cow position:
               
chr24:39492973-39493259 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
289
               

               
Alignm identity:
               
218
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
65, 19
               

               
Conread position:
               
3-312
               

               
Cow position:
               
chr24:18266496-18266175 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
326
               

               
Alignm identity:
               
240
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
142, 245
               

               
Conread position:
               
3-333
               

               
Cow position:
               
chr24:36555152-36554826 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
338
               

               
Alignm identity:
               
256
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
145, 71
               

               
Conread position:
               
3-337
               

               
Cow position:
               
chr24:27052815-27052482 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
345
               

               
Alignm identity:
               
248
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
150, 17
               

               
Conread position:
               
3-348
               

               
Cow position:
               
chr24:6160408-6160064 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
353
               

               
Alignm identity:
               
246
               

               
Alignm E-value:
               
2.8026e-45
               

               
Alignm gaps (pig, cow):
               
152, 96
               

               
Conread position:
               
3-372
               

               
Cow position:
               
chr24:211657-212038 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
386
               

               
Alignm identity:
               
269
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
133, 264
               

               
Conread position:
               
3-377
               

               
Cow position:
               
chr24:29180577-29180942 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
380
               

               
Alignm identity:
               
260
               

               
Alignm E-value:
               
1.99965e-42
               

               
Alignm gaps (pig, cow):
               
230, 71
               

               
Conread position:
               
3-378
               

               
Cow position:
               
chr24:11886838-11887214 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
388
               

               
Alignm identity:
               
280
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
142, 56
               

               
Conread position:
               
3-378
               

               
Cow position:
               
chr24:40300832-40301216 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
392
               

               
Alignm identity:
               
264
               

               
Alignm E-value:
               
4e-37
               

               
Alignm gaps (pig, cow):
               
124, 23
               

               
Conread position:
               
3-380
               

               
Cow position:
               
chr24:39159868-39159491 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
386
               

               
Alignm identity:
               
268
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
147, 100
               

               
Conread position:
               
3-396
               

               
Cow position:
               
chr24:6141280-6140876 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
410
               

               
Alignm identity:
               
280
               

               
Alignm E-value:
               
1.4013e-45
               

               
Alignm gaps (pig, cow):
               
70, 122
               

               
Conread position:
               
3-396
               

               
Cow position:
               
chr24:11839856-11840262 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
418
               

               
Alignm identity:
               
290
               

               
Alignm E-value:
               
2.8026e-45
               

               
Alignm gaps (pig, cow):
               
47, 30
               

               
Conread position:
               
3-396
               

               
Cow position:
               
chr24:23556652-23556259 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
412
               

               
Alignm identity:
               
282
               

               
Alignm E-value:
               
2e-38
               

               
Alignm gaps (pig, cow):
               
142, 14
               

               
Conread position:
               
3-396
               

               
Cow position:
               
chr24:26929273-26928869 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
409
               

               
Alignm identity:
               
281
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
142, 269
               

               
Conread position:
               
3-397
               

               
Cow position:
               
chr24:9070759-9070371 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
403
               

               
Alignm identity:
               
283
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
91, 212
               

               
Conread position:
               
3-400
               

               
Cow position:
               
chr24:33621810-33621402 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
418
               

               
Alignm identity:
               
294
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
142, 208
               

               
Conread position:
               
3-401
               

               
Cow position:
               
chr24:32370235-32369834 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
410
               

               
Alignm identity:
               
292
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
66, 138
               

               
Conread position:
               
3-401
               

               
Cow position:
               
chr24:32609314-32609727 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
416
               

               
Alignm identity:
               
288
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
142, 296
               

               
Conread position:
               
3-402
               

               
Cow position:
               
chr24:28553870-28553482 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
410
               

               
Alignm identity:
               
296
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
43, 76
               

               
Conread position:
               
3-403
               

               
Cow position:
               
chr24:38814650-38815049 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
413
               

               
Alignm identity:
               
295
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
149, 25
               

               
Conread position:
               
3-404
               

               
Cow position:
               
chr24:25320668-25321068 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
419
               

               
Alignm identity:
               
295
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
142, 25
               

               
Conread position:
               
3-417
               

               
Cow position:
               
chr24:23616371-23616793 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
430
               

               
Alignm identity:
               
293
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
150, 71
               

               
Conread position:
               
3-417
               

               
Cow position:
               
chr24:24250400-24250819 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
428
               

               
Alignm identity:
               
291
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
39, 270
               

               
Conread position:
               
3-419
               

               
Cow position:
               
chr24:30235554-30235968 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
430
               

               
Alignm identity:
               
290
               

               
Alignm E-value:
               
8.96831e-44
               

               
Alignm gaps (pig, cow):
               
142, 82
               

               
Conread position:
               
3-422
               

               
Cow position:
               
chr24:32054347-32054762 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
429
               

               
Alignm identity:
               
307
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
66, 152
               

               
Conread position:
               
3-424
               

               
Cow position:
               
chr24:31811863-31812292 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
439
               

               
Alignm identity:
               
303
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
142, 41
               

               
Conread position:
               
3-425
               

               
Cow position:
               
chr24:19466257-19465813 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
448
               

               
Alignm identity:
               
314
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
142, 91
               

               
Conread position:
               
3-425
               

               
Cow position:
               
chr24:27149083-27149488 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
431
               

               
Alignm identity:
               
300
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
149, 35
               

               
Conread position:
               
3-426
               

               
Cow position:
               
chr24:3493569-3493990 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
435
               

               
Alignm identity:
               
298
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
150, 84
               

               
Conread position:
               
3-427
               

               
Cow position:
               
chr24:2402701-2402263 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
449
               

               
Alignm identity:
               
303
               

               
Alignm E-value:
               
6.99949e-42
               

               
Alignm gaps (pig, cow):
               
30, 73
               

               
Conread position:
               
3-427
               

               
Cow position:
               
chr24:27906104-27906545 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
450
               

               
Alignm identity:
               
321
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
65, 217
               

               
Conread position:
               
3-427
               

               
Cow position:
               
chr24:29679636-29679204 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
446
               

               
Alignm identity:
               
307
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
69, 218
               

               
Conread position:
               
3-427
               

               
Cow position:
               
chr24:44987698-44987268 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
440
               

               
Alignm identity:
               
317
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
71, 121
               

               
Conread position:
               
3-428
               

               
Cow position:
               
chr24:5141610-5142049 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
451
               

               
Alignm identity:
               
306
               

               
Alignm E-value:
               
6.99949e-42
               

               
Alignm gaps (pig, cow):
               
34, 77
               

               
Conread position:
               
3-428
               

               
Cow position:
               
chr24:17104888-17104462 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
434
               

               
Alignm identity:
               
303
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
71, 22
               

               
Conread position:
               
3-428
               

               
Cow position:
               
chr24:17407072-17407500 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
448
               

               
Alignm identity:
               
309
               

               
Alignm E-value:
               
2.99878e-43
               

               
Alignm gaps (pig, cow):
               
134, 25
               

               
Conread position:
               
3-428
               

               
Cow position:
               
chr24:20874356-20874789 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
444
               

               
Alignm identity:
               
295
               

               
Alignm E-value:
               
6e-40
               

               
Alignm gaps (pig, cow):
               
142, 6
               

               
Conread position:
               
3-428
               

               
Cow position:
               
chr24:27290556-27290979 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
435
               

               
Alignm identity:
               
297
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
184, 25
               

               
Conread position:
               
3-428
               

               
Cow position:
               
chr24:29673195-29673630 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
440
               

               
Alignm identity:
               
310
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
146, 278
               

               
Conread position:
               
3-428
               

               
Cow position:
               
chr24:42103046-42103473 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
444
               

               
Alignm identity:
               
305
               

               
Alignm E-value:
               
9.80909e-45
               

               
Alignm gaps (pig, cow):
               
32, 60
               

               
Conread position:
               
3-432
               

               
Cow position:
               
chr24:32205120-32204683 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
445
               

               
Alignm identity:
               
314
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
56, 260
               

               
Conread position:
               
3-433
               

               
Cow position:
               
chr24:5754517-5754947 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
439
               

               
Alignm identity:
               
294
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
120, 131
               

               
Conread position:
               
3-520
               

               
Cow position:
               
chr24:29596135-29595629 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
537
               

               
Alignm identity:
               
362
               

               
Alignm E-value:
               
1.4013e-45
               

               
Alignm gaps (pig, cow):
               
125, 77
               

               
Conread position:
               
3-520
               

               
Cow position:
               
chr24:38684427-38683905 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
534
               

               
Alignm identity:
               
342
               

               
Alignm E-value:
               
5.99994e-41
               

               
Alignm gaps (pig, cow):
               
149, 73
               

               
Conread position:
               
3-524
               

               
Cow position:
               
chr24:2675006-2675511 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
528
               

               
Alignm identity:
               
362
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
15, 78
               

               
Conread position:
               
3-525
               

               
Cow position:
               
chr24:18405628-18405101 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
540
               

               
Alignm identity:
               
371
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
175, 70
               

               
Conread position:
               
3-527
               

               
Cow position:
               
chr24:33153461-33153980 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
533
               

               
Alignm identity:
               
358
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
152, 24
               

               
Conread position:
               
3-529
               

               
Cow position:
               
chr24:15692695-15693230 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
552
               

               
Alignm identity:
               
354
               

               
Alignm E-value:
               
2e-30
               

               
Alignm gaps (pig, cow):
               
70, 29
               

               
Conread position:
               
4-337
               

               
Cow position:
               
chr24:7917692-7917349 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
351
               

               
Alignm identity:
               
252
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
37, 70
               

               
Conread position:
               
4-396
               

               
Cow position:
               
chr24:34272479-34272885 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
417
               

               
Alignm identity:
               
287
               

               
Alignm E-value:
               
1.99965e-42
               

               
Alignm gaps (pig, cow):
               
125, 160
               

               
Conread position:
               
4-428
               

               
Cow position:
               
chr24:28496911-28496475 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
442
               

               
Alignm identity:
               
296
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
98, 70
               

               
Conread position:
               
4-445
               

               
Cow position:
               
chr24:15508866-15508420 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
460
               

               
Alignm identity:
               
309
               

               
Alignm E-value:
               
8.96831e-44
               

               
Alignm gaps (pig, cow):
               
33, 79
               

               
Conread position:
               
4-508
               

               
Cow position:
               
chr24:18485323-18484811 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
520
               

               
Alignm identity:
               
357
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
141, 272
               

               
Conread position:
               
5-228
               

               
Cow position:
               
chr24:20923280-20923493 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
224
               

               
Alignm identity:
               
170
               

               
Alignm E-value:
               
5e-38
               

               
Alignm gaps (pig, cow):
               
23, 0
               

               
Conread position:
               
5-229
               

               
Cow position:
               
chr24:27465891-27465669 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
227
               

               
Alignm identity:
               
169
               

               
Alignm E-value:
               
5e-39
               

               
Alignm gaps (pig, cow):
               
62, 23
               

               
Conread position:
               
5-263
               

               
Cow position:
               
chr24:17309425-17309173 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
266
               

               
Alignm identity:
               
196
               

               
Alignm E-value:
               
4e-36
               

               
Alignm gaps (pig, cow):
               
95, 143
               

               
Conread position:
               
6-524
               

               
Cow position:
               
chr24:18732439-18731906 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
549
               

               
Alignm identity:
               
361
               

               
Alignm E-value:
               
2e-40
               

               
Alignm gaps (pig, cow):
               
122, 22
               

               
Conread position:
               
8-226
               

               
Cow position:
               
chr24:15919383-15919614 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
234
               

               
Alignm identity:
               
168
               

               
Alignm E-value:
               
1e-24
               

               
Alignm gaps (pig, cow):
               
28, 48
               

               
Conread position:
               
8-229
               

               
Cow position:
               
chr24:18257389-18257165 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
228
               

               
Alignm identity:
               
173
               

               
Alignm E-value:
               
5.99994e-41
               

               
Alignm gaps (pig, cow):
               
144, 178
               

               
Conread position:
               
8-256
               

               
Cow position:
               
chr24:20970111-20969862 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
251
               

               
Alignm identity:
               
199
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
230, 149
               

               
Conread position:
               
8-259
               

               
Cow position:
               
chr24:814581-814331 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
258
               

               
Alignm identity:
               
199
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
145, 20
               

               
Conread position:
               
8-281
               

               
Cow position:
               
chr24:6340698-6340973 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
279
               

               
Alignm identity:
               
214
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
147, 233
               

               
Conread position:
               
8-358
               

               
Cow position:
               
chr24:20024288-20024650 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
373
               

               
Alignm identity:
               
275
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
137, 262
               

               
Conread position:
               
8-370
               

               
Cow position:
               
chr24:6149711-6150072 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
370
               

               
Alignm identity:
               
248
               

               
Alignm E-value:
               
2e-38
               

               
Alignm gaps (pig, cow):
               
146, 79
               

               
Conread position:
               
8-422
               

               
Cow position:
               
chr24:28721561-28721986 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
439
               

               
Alignm identity:
               
297
               

               
Alignm E-value:
               
2e-40
               

               
Alignm gaps (pig, cow):
               
40, 94
               

               
Conread position:
               
8-428
               

               
Cow position:
               
chr24:33098806-33098365 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
443
               

               
Alignm identity:
               
306
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
146, 38
               

               
Conread position:
               
8-429
               

               
Cow position:
               
chr24:29781843-29782268 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
437
               

               
Alignm identity:
               
301
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
128, 66
               

               
Conread position:
               
8-453
               

               
Cow position:
               
chr24:18970807-18970374 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
456
               

               
Alignm identity:
               
323
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
178, 30
               

               
Conread position:
               
9-250
               

               
Cow position:
               
chr24:11006896-11007151 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
256
               

               
Alignm identity:
               
187
               

               
Alignm E-value:
               
1e-37
               

               
Alignm gaps (pig, cow):
               
39, 0
               

               
Conread position:
               
9-384
               

               
Cow position:
               
chr24:3165502-3165881 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
390
               

               
Alignm identity:
               
269
               

               
Alignm E-value:
               
8.00141e-43
               

               
Alignm gaps (pig, cow):
               
17, 191
               

               
Conread position:
               
10-187
               

               
Cow position:
               
chr24:13238092-13238269 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
180
               

               
Alignm identity:
               
128
               

               
Alignm E-value:
               
1e-23
               

               
Alignm gaps (pig, cow):
               
143, 125
               

               
Conread position:
               
10-328
               

               
Cow position:
               
chr24:35795059-35794732 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
331
               

               
Alignm identity:
               
228
               

               
Alignm E-value:
               
6e-40
               

               
Alignm gaps (pig, cow):
               
18, 288
               

               
Conread position:
               
11-221
               

               
Cow position:
               
chr24:39842165-39841949 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
220
               

               
Alignm identity:
               
151
               

               
Alignm E-value:
               
7e-21
               

               
Alignm gaps (pig, cow):
               
51, 97
               

               
Conread position:
               
11-228
               

               
Cow position:
               
chr24:6436476-6436702 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
229
               

               
Alignm identity:
               
161
               

               
Alignm E-value:
               
3e-24
               

               
Alignm gaps (pig, cow):
               
136, 128
               

               
Conread position:
               
11-229
               

               
Cow position:
               
chr24:18374470-18374686 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
229
               

               
Alignm identity:
               
169
               

               
Alignm E-value:
               
2e-29
               

               
Alignm gaps (pig, cow):
               
134, 31
               

               
Conread position:
               
11-280
               

               
Cow position:
               
chr24:39440873-39440592 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
283
               

               
Alignm identity:
               
216
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
57, 10
               

               
Conread position:
               
11-385
               

               
Cow position:
               
chr24:9222692-9222320 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
389
               

               
Alignm identity:
               
270
               

               
Alignm E-value:
               
8.00141e-43
               

               
Alignm gaps (pig, cow):
               
134, 239
               

               
Conread position:
               
11-400
               

               
Cow position:
               
chr24:13625973-13626362 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
404
               

               
Alignm identity:
               
262
               

               
Alignm E-value:
               
4e-26
               

               
Alignm gaps (pig, cow):
               
58, 84
               

               
Conread position:
               
11-414
               

               
Cow position:
               
chr24:39483160-39483570 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
420
               

               
Alignm identity:
               
287
               

               
Alignm E-value:
               
1.4013e-45
               

               
Alignm gaps (pig, cow):
               
134, 42
               

               
Conread position:
               
11-428
               

               
Cow position:
               
chr24:18741887-18741464 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
432
               

               
Alignm identity:
               
304
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
133, 256
               

               
Conread position:
               
11-440
               

               
Cow position:
               
chr24:34564812-34565237 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
440
               

               
Alignm identity:
               
300
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
150, 62
               

               
Conread position:
               
11-513
               

               
Cow position:
               
chr24:20741006-20741505 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
514
               

               
Alignm identity:
               
340
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
138, 179
               

               
Conread position:
               
12-263
               

               
Cow position:
               
chr24:35572172-35572430 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
263
               

               
Alignm identity:
               
198
               

               
Alignm E-value:
               
2.99878e-43
               

               
Alignm gaps (pig, cow):
               
131, 45
               

               
Conread position:
               
13-270
               

               
Cow position:
               
chr24:43635117-43635388 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
277
               

               
Alignm identity:
               
201
               

               
Alignm E-value:
               
2e-32
               

               
Alignm gaps (pig, cow):
               
35, 65
               

               
Conread position:
               
14-339
               

               
Cow position:
               
chr24:30177923-30178255 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
333
               

               
Alignm identity:
               
237
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
120, 0
               

               
Conread position:
               
14-425
               

               
Cow position:
               
chr24:15861910-15861489 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
428
               

               
Alignm identity:
               
297
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
139, 26
               

               
Conread position:
               
14-426
               

               
Cow position:
               
chr24:30484247-30483835 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
428
               

               
Alignm identity:
               
298
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
172, 20
               

               
Conread position:
               
14-524
               

               
Cow position:
               
chr24:34532810-34533312 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
526
               

               
Alignm identity:
               
352
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
131, 242
               

               
Conread position:
               
15-428
               

               
Cow position:
               
chr24:35332407-35332835 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
433
               

               
Alignm identity:
               
296
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
133, 72
               

               
Conread position:
               
16-270
               

               
Cow position:
               
chr24:36486370-36486107 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
267
               

               
Alignm identity:
               
204
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
120, 58
               

               
Conread position:
               
16-426
               

               
Cow position:
               
chr24:44041321-44040902 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
424
               

               
Alignm identity:
               
302
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
51, 257
               

               
Conread position:
               
17-370
               

               
Cow position:
               
chr24:31323974-31324334 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
374
               

               
Alignm identity:
               
262
               

               
Alignm E-value:
               
2e-38
               

               
Alignm gaps (pig, cow):
               
27, 50
               

               
Conread position:
               
18-400
               

               
Cow position:
               
chr24:44808936-44809329 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
400
               

               
Alignm identity:
               
267
               

               
Alignm E-value:
               
5e-38
               

               
Alignm gaps (pig, cow):
               
127, 28
               

               
Conread position:
               
18-428
               

               
Cow position:
               
chr24:28062632-28063055 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
436
               

               
Alignm identity:
               
306
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
21, 260
               

               
Conread position:
               
19-432
               

               
Cow position:
               
chr24:43683765-43683350 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
426
               

               
Alignm identity:
               
274
               

               
Alignm E-value:
               
7e-31
               

               
Alignm gaps (pig, cow):
               
12, 64
               

               
Conread position:
               
20-524
               

               
Cow position:
               
chr24:31159319-31159805 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
515
               

               
Alignm identity:
               
346
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
12, 115
               

               
Conread position:
               
21-267
               

               
Cow position:
               
chr24:6154518-6154759 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
249
               

               
Alignm identity:
               
182
               

               
Alignm E-value:
               
6e-40
               

               
Alignm gaps (pig, cow):
               
221, 137
               

               
Conread position:
               
22-204
               

               
Cow position:
               
chr24:19804381-19804574 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
194
               

               
Alignm identity:
               
151
               

               
Alignm E-value:
               
3e-35
               

               
Alignm gaps (pig, cow):
               
9, 0
               

               
Conread position:
               
22-236
               

               
Cow position:
               
chr24:28600918-28600699 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
223
               

               
Alignm identity:
               
170
               

               
Alignm E-value:
               
5e-39
               

               
Alignm gaps (pig, cow):
               
28, 120
               

               
Conread position:
               
23-400
               

               
Cow position:
               
chr24:42345312-42344918 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
398
               

               
Alignm identity:
               
270
               

               
Alignm E-value:
               
8.00141e-43
               

               
Alignm gaps (pig, cow):
               
122, 30
               

               
Conread position:
               
26-415
               

               
Cow position:
               
chr24:28600155-28599763 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
404
               

               
Alignm identity:
               
273
               

               
Alignm E-value:
               
2e-40
               

               
Alignm gaps (pig, cow):
               
129, 91
               

               
Conread position:
               
26-421
               

               
Cow position:
               
chr24:24755156-24755546 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
404
               

               
Alignm identity:
               
269
               

               
Alignm E-value:
               
5e-39
               

               
Alignm gaps (pig, cow):
               
126, 9
               

               
Conread position:
               
26-427
               

               
Cow position:
               
chr24:19535545-19535149 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
411
               

               
Alignm identity:
               
277
               

               
Alignm E-value:
               
2e-40
               

               
Alignm gaps (pig, cow):
               
131, 60
               

               
Conread position:
               
26-531
               

               
Cow position:
               
chr24:8770283-8770779 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
517
               

               
Alignm identity:
               
335
               

               
Alignm E-value:
               
2e-40
               

               
Alignm gaps (pig, cow):
               
126, 216
               

               
Conread position:
               
29-207
               

               
Cow position:
               
chr24:40974710-40974886 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
180
               

               
Alignm identity:
               
133
               

               
Alignm E-value:
               
5e-28
               

               
Alignm gaps (pig, cow):
               
7, 18
               

               
Conread position:
               
29-218
               

               
Cow position:
               
chr24:17763549-17763364 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
191
               

               
Alignm identity:
               
135
               

               
Alignm E-value:
               
3e-24
               

               
Alignm gaps (pig, cow):
               
175, 105
               

               
Conread position:
               
29-372
               

               
Cow position:
               
chr24:41985679-41986046 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
370
               

               
Alignm identity:
               
257
               

               
Alignm E-value:
               
6e-40
               

               
Alignm gaps (pig, cow):
               
116, 6
               

               
Conread position:
               
32-524
               

               
Cow position:
               
chr24:39905753-39905251 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
517
               

               
Alignm identity:
               
338
               

               
Alignm E-value:
               
6.99949e-42
               

               
Alignm gaps (pig, cow):
               
121, 38
               

               
Conread position:
               
34-259
               

               
Cow position:
               
chr24:43432509-43432733 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
229
               

               
Alignm identity:
               
178
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
146, 40
               

               
Conread position:
               
34-420
               

               
Cow position:
               
chr24:40129832-40130229 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
406
               

               
Alignm identity:
               
281
               

               
Alignm E-value:
               
1.4013e-45
               

               
Alignm gaps (pig, cow):
               
118, 39
               

               
Conread position:
               
35-233
               

               
Cow position:
               
chr24:31293441-31293236 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
206
               

               
Alignm identity:
               
142
               

               
Alignm E-value:
               
9e-23
               

               
Alignm gaps (pig, cow):
               
117, 0
               

               
Conread position:
               
35-298
               

               
Cow position:
               
chr24:34369298-34369027 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
278
               

               
Alignm identity:
               
187
               

               
Alignm E-value:
               
8e-22
               

               
Alignm gaps (pig, cow):
               
110, 42
               

               
Conread position:
               
35-396
               

               
Cow position:
               
chr24:18974909-18975284 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
377
               

               
Alignm identity:
               
258
               

               
Alignm E-value:
               
8.96831e-44
               

               
Alignm gaps (pig, cow):
               
114, 37
               

               
Conread position:
               
35-486
               

               
Cow position:
               
chr24:18331444-18331881 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
462
               

               
Alignm identity:
               
319
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
70, 100
               

               
Conread position:
               
35-548
               

               
Cow position:
               
chr24:14648627-14648126 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
525
               

               
Alignm identity:
               
348
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
301, 105
               

               
Conread position:
               
36-226
               

               
Cow position:
               
chr24:2730863-2730664 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
200
               

               
Alignm identity:
               
157
               

               
Alignm E-value:
               
5e-39
               

               
Alignm gaps (pig, cow):
               
12, 0
               

               
Conread position:
               
36-231
               

               
Cow position:
               
chr24:16268394-16268205 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
197
               

               
Alignm identity:
               
144
               

               
Alignm E-value:
               
1e-27
               

               
Alignm gaps (pig, cow):
               
98, 38
               

               
Conread position:
               
36-260
               

               
Cow position:
               
chr24:30545148-30544918 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
231
               

               
Alignm identity:
               
169
               

               
Alignm E-value:
               
1e-36
               

               
Alignm gaps (pig, cow):
               
12, 0
               

               
Conread position:
               
36-260
               

               
Cow position:
               
chr24:40184332-40184566 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
239
               

               
Alignm identity:
               
172
               

               
Alignm E-value:
               
5e-28
               

               
Alignm gaps (pig, cow):
               
38, 13
               

               
Conread position:
               
36-270
               

               
Cow position:
               
chr24:24137142-24136908 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
239
               

               
Alignm identity:
               
179
               

               
Alignm E-value:
               
1.99993e-41
               

               
Alignm gaps (pig, cow):
               
120, 78
               

               
Conread position:
               
36-271
               

               
Cow position:
               
chr24:44702687-44702929 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
244
               

               
Alignm identity:
               
175
               

               
Alignm E-value:
               
3e-34
               

               
Alignm gaps (pig, cow):
               
101, 38
               

               
Conread position:
               
36-276
               

               
Cow position:
               
chr24:6508054-6507813 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
247
               

               
Alignm identity:
               
167
               

               
Alignm E-value:
               
3e-23
               

               
Alignm gaps (pig, cow):
               
117, 38
               

               
Conread position:
               
36-277
               

               
Cow position:
               
chr24:37386631-37386394 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
245
               

               
Alignm identity:
               
168
               

               
Alignm E-value:
               
4e-26
               

               
Alignm gaps (pig, cow):
               
98, 38
               

               
Conread position:
               
36-387
               

               
Cow position:
               
chr24:39350499-39350150 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
361
               

               
Alignm identity:
               
238
               

               
Alignm E-value:
               
2e-30
               

               
Alignm gaps (pig, cow):
               
34, 82
               

               
Conread position:
               
36-425
               

               
Cow position:
               
chr24:6102542-6102932 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
400
               

               
Alignm identity:
               
266
               

               
Alignm E-value:
               
2e-38
               

               
Alignm gaps (pig, cow):
               
38, 60
               

               
Conread position:
               
36-428
               

               
Cow position:
               
chr24:34742458-34742861 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
414
               

               
Alignm identity:
               
284
               

               
Alignm E-value:
               
1.99993e-41
               

               
Alignm gaps (pig, cow):
               
29, 39
               

               
Conread position:
               
37-322
               

               
Cow position:
               
chr24:14729119-14729400 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
289
               

               
Alignm identity:
               
199
               

               
Alignm E-value:
               
1e-34
               

               
Alignm gaps (pig, cow):
               
142, 37
               

               
Conread position:
               
37-385
               

               
Cow position:
               
chr24:34761604-34761957 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
364
               

               
Alignm identity:
               
245
               

               
Alignm E-value:
               
2e-30
               

               
Alignm gaps (pig, cow):
               
10, 24
               

               
Conread position:
               
38-263
               

               
Cow position:
               
chr24:591621-591857 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
238
               

               
Alignm identity:
               
179
               

               
Alignm E-value:
               
2e-38
               

               
Alignm gaps (pig, cow):
               
77, 227
               

               
Conread position:
               
38-263
               

               
Cow position:
               
chr24:29388961-29389185 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
229
               

               
Alignm identity:
               
170
               

               
Alignm E-value:
               
5e-39
               

               
Alignm gaps (pig, cow):
               
109, 22
               

               
Conread position:
               
39-261
               

               
Cow position:
               
chr24:28699769-28699993 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
232
               

               
Alignm identity:
               
169
               

               
Alignm E-value:
               
6e-30
               

               
Alignm gaps (pig, cow):
               
30, 44
               

               
Conread position:
               
39-380
               

               
Cow position:
               
chr24:27726292-27725953 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
350
               

               
Alignm identity:
               
230
               

               
Alignm E-value:
               
6e-30
               

               
Alignm gaps (pig, cow):
               
95, 105
               

               
Conread position:
               
40-229
               

               
Cow position:
               
chr24:16267505-16267686 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
190
               

               
Alignm identity:
               
145
               

               
Alignm E-value:
               
8e-33
               

               
Alignm gaps (pig, cow):
               
89, 0
               

               
Conread position:
               
40-258
               

               
Cow position:
               
chr24:27941295-27941070 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
228
               

               
Alignm identity:
               
171
               

               
Alignm E-value:
               
4e-37
               

               
Alignm gaps (pig, cow):
               
105, 74
               

               
Conread position:
               
40-361
               

               
Cow position:
               
chr24:3430448-3430773 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
334
               

               
Alignm identity:
               
237
               

               
Alignm E-value:
               
6.99949e-42
               

               
Alignm gaps (pig, cow):
               
113, 87
               

               
Conread position:
               
40-390
               

               
Cow position:
               
chr24:43200561-43200205 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
361
               

               
Alignm identity:
               
254
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
66, 173
               

               
Conread position:
               
41-384
               

               
Cow position:
               
chr24:30229180-30229536 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
362
               

               
Alignm identity:
               
255
               

               
Alignm E-value:
               
2.99878e-43
               

               
Alignm gaps (pig, cow):
               
27, 185
               

               
Conread position:
               
42-256
               

               
Cow position:
               
chr24:18324329-18324559 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
231
               

               
Alignm identity:
               
173
               

               
Alignm E-value:
               
3e-34
               

               
Alignm gaps (pig, cow):
               
6, 0
               

               
Conread position:
               
42-270
               

               
Cow position:
               
chr24:35073807-35074043 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
238
               

               
Alignm identity:
               
179
               

               
Alignm E-value:
               
5.99994e-41
               

               
Alignm gaps (pig, cow):
               
102, 232
               

               
Conread position:
               
42-426
               

               
Cow position:
               
chr24:37650385-37650785 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
404
               

               
Alignm identity:
               
267
               

               
Alignm E-value:
               
1e-36
               

               
Alignm gaps (pig, cow):
               
111, 220
               

               
Conread position:
               
42-520
               

               
Cow position:
               
chr24:11118995-11119465 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
495
               

               
Alignm identity:
               
330
               

               
Alignm E-value:
               
5.99994e-41
               

               
Alignm gaps (pig, cow):
               
31, 233
               

               
Conread position:
               
44-533
               

               
Cow position:
               
chr24:25885441-25884966 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
499
               

               
Alignm identity:
               
345
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
85, 214
               

               
Conread position:
               
45-275
               

               
Cow position:
               
chr24:27821361-27821144 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
232
               

               
Alignm identity:
               
161
               

               
Alignm E-value:
               
3e-22
               

               
Alignm gaps (pig, cow):
               
135, 81
               

               
Conread position:
               
45-396
               

               
Cow position:
               
chr24:25229339-25228988 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
364
               

               
Alignm identity:
               
241
               

               
Alignm E-value:
               
1e-27
               

               
Alignm gaps (pig, cow):
               
108, 29
               

               
Conread position:
               
45-422
               

               
Cow position:
               
chr24:24491296-24490916 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
393
               

               
Alignm identity:
               
257
               

               
Alignm E-value:
               
2e-29
               

               
Alignm gaps (pig, cow):
               
23, 195
               

               
Conread position:
               
45-428
               

               
Cow position:
               
chr24:7913716-7914112 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
402
               

               
Alignm identity:
               
280
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
98, 237
               

               
Conread position:
               
46-304
               

               
Cow position:
               
chr24:17567109-17567364 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
265
               

               
Alignm identity:
               
190
               

               
Alignm E-value:
               
9e-34
               

               
Alignm gaps (pig, cow):
               
109, 88
               

               
Conread position:
               
46-380
               

               
Cow position:
               
chr24:1269523-1269842 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
338
               

               
Alignm identity:
               
232
               

               
Alignm E-value:
               
4e-36
               

               
Alignm gaps (pig, cow):
               
105, 109
               

               
Conread position:
               
46-518
               

               
Cow position:
               
chr24:43364082-43364572 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
497
               

               
Alignm identity:
               
343
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
111, 220
               

               
Conread position:
               
47-231
               

               
Cow position:
               
chr24:6900544-6900737 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
194
               

               
Alignm identity:
               
142
               

               
Alignm E-value:
               
5e-28
               

               
Alignm gaps (pig, cow):
               
106, 0
               

               
Conread position:
               
48-214
               

               
Cow position:
               
chr24:25424784-25424956 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
173
               

               
Alignm identity:
               
131
               

               
Alignm E-value:
               
5e-29
               

               
Alignm gaps (pig, cow):
               
97, 0
               

               
Conread position:
               
48-370
               

               
Cow position:
               
chr24:35675264-35675588 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
337
               

               
Alignm identity:
               
225
               

               
Alignm E-value:
               
4e-26
               

               
Alignm gaps (pig, cow):
               
97, 214
               

               
Conread position:
               
48-403
               

               
Cow position:
               
chr24:27748375-27748723 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
365
               

               
Alignm identity:
               
241
               

               
Alignm E-value:
               
6e-30
               

               
Alignm gaps (pig, cow):
               
107, 32
               

               
Conread position:
               
48-524
               

               
Cow position:
               
chr24:40849885-40850363 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
500
               

               
Alignm identity:
               
335
               

               
Alignm E-value:
               
1.99993e-41
               

               
Alignm gaps (pig, cow):
               
96, 25
               

               
Conread position:
               
50-294
               

               
Cow position:
               
chr24:27967803-27968053 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
253
               

               
Alignm identity:
               
187
               

               
Alignm E-value:
               
2e-40
               

               
Alignm gaps (pig, cow):
               
104, 157
               

               
Conread position:
               
50-379
               

               
Cow position:
               
chr24:36404424-36404086 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
347
               

               
Alignm identity:
               
243
               

               
Alignm E-value:
               
5e-38
               

               
Alignm gaps (pig, cow):
               
93, 32
               

               
Conread position:
               
50-432
               

               
Cow position:
               
chr24:17294464-17294086 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
388
               

               
Alignm identity:
               
272
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
100, 106
               

               
Conread position:
               
52-190
               

               
Cow position:
               
chr24:42380977-42380834 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
145
               

               
Alignm identity:
               
109
               

               
Alignm E-value:
               
7e-21
               

               
Alignm gaps (pig, cow):
               
101, 40
               

               
Conread position:
               
52-270
               

               
Cow position:
               
chr24:18390563-18390338 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
228
               

               
Alignm identity:
               
173
               

               
Alignm E-value:
               
2e-38
               

               
Alignm gaps (pig, cow):
               
101, 29
               

               
Conread position:
               
52-322
               

               
Cow position:
               
chr24:17363920-17363651 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
279
               

               
Alignm identity:
               
193
               

               
Alignm E-value:
               
6e-30
               

               
Alignm gaps (pig, cow):
               
83, 21
               

               
Conread position:
               
53-229
               

               
Cow position:
               
chr24:43370974-43371155 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
182
               

               
Alignm identity:
               
135
               

               
Alignm E-value:
               
5e-29
               

               
Alignm gaps (pig, cow):
               
103, 0
               

               
Conread position:
               
53-385
               

               
Cow position:
               
chr24:19769224-19769553 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
343
               

               
Alignm identity:
               
239
               

               
Alignm E-value:
               
2e-38
               

               
Alignm gaps (pig, cow):
               
104, 81
               

               
Conread position:
               
54-270
               

               
Cow position:
               
chr24:17955720-17955490 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
232
               

               
Alignm identity:
               
173
               

               
Alignm E-value:
               
2e-32
               

               
Alignm gaps (pig, cow):
               
47, 5
               

               
Conread position:
               
54-305
               

               
Cow position:
               
chr24:21860493-21860242 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
258
               

               
Alignm identity:
               
184
               

               
Alignm E-value:
               
3e-34
               

               
Alignm gaps (pig, cow):
               
101, 20
               

               
Conread position:
               
55-400
               

               
Cow position:
               
chr24:41980934-41980582 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
359
               

               
Alignm identity:
               
233
               

               
Alignm E-value:
               
5e-28
               

               
Alignm gaps (pig, cow):
               
102, 18
               

               
Conread position:
               
56-278
               

               
Cow position:
               
chr24:12992784-12993016 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
237
               

               
Alignm identity:
               
164
               

               
Alignm E-value:
               
7e-21
               

               
Alignm gaps (pig, cow):
               
89, 153
               

               
Conread position:
               
57-396
               

               
Cow position:
               
chr24:16994624-16994956 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
348
               

               
Alignm identity:
               
236
               

               
Alignm E-value:
               
8e-33
               

               
Alignm gaps (pig, cow):
               
96, 20
               

               
Conread position:
               
59-278
               

               
Cow position:
               
chr24:5151967-5152193 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
231
               

               
Alignm identity:
               
177
               

               
Alignm E-value:
               
5e-38
               

               
Alignm gaps (pig, cow):
               
86, 15
               

               
Conread position:
               
60-524
               

               
Cow position:
               
chr24:6450248-6450684 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
470
               

               
Alignm identity:
               
324
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
126, 14
               

               
Conread position:
               
61-425
               

               
Cow position:
               
chr24:32124908-32124539 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
380
               

               
Alignm identity:
               
244
               

               
Alignm E-value:
               
3e-22
               

               
Alignm gaps (pig, cow):
               
45, 185
               

               
Conread position:
               
64-275
               

               
Cow position:
               
chr24:2970870-2970649 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
222
               

               
Alignm identity:
               
158
               

               
Alignm E-value:
               
1e-27
               

               
Alignm gaps (pig, cow):
               
65, 0
               

               
Conread position:
               
65-365
               

               
Cow position:
               
chr24:23442843-23442537 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
313
               

               
Alignm identity:
               
212
               

               
Alignm E-value:
               
5e-29
               

               
Alignm gaps (pig, cow):
               
78, 52
               

               
Conread position:
               
66-270
               

               
Cow position:
               
chr24:42825759-42825544 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
217
               

               
Alignm identity:
               
157
               

               
Alignm E-value:
               
1e-27
               

               
Alignm gaps (pig, cow):
               
70, 211
               

               
Conread position:
               
67-426
               

               
Cow position:
               
chr24:27608358-27608002 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
371
               

               
Alignm identity:
               
246
               

               
Alignm E-value:
               
2e-29
               

               
Alignm gaps (pig, cow):
               
27, 37
               

               
Conread position:
               
74-237
               

               
Cow position:
               
chr24:30776921-30776749 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
173
               

               
Alignm identity:
               
128
               

               
Alignm E-value:
               
1e-23
               

               
Alignm gaps (pig, cow):
               
71, 0
               

               
Conread position:
               
74-269
               

               
Cow position:
               
chr24:27207448-27207242 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
207
               

               
Alignm identity:
               
150
               

               
Alignm E-value:
               
4e-27
               

               
Alignm gaps (pig, cow):
               
79, 0
               

               
Conread position:
               
74-427
               

               
Cow position:
               
chr24:10498955-10499320 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
373
               

               
Alignm identity:
               
244
               

               
Alignm E-value:
               
4e-26
               

               
Alignm gaps (pig, cow):
               
10, 144
               

               
Conread position:
               
75-385
               

               
Cow position:
               
chr24:18771435-18771116 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
326
               

               
Alignm identity:
               
224
               

               
Alignm E-value:
               
7e-32
               

               
Alignm gaps (pig, cow):
               
78, 13
               

               
Conread position:
               
76-366
               

               
Cow position:
               
chr24:2096140-2095837 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
306
               

               
Alignm identity:
               
208
               

               
Alignm E-value:
               
2e-30
               

               
Alignm gaps (pig, cow):
               
77, 115
               

               
Conread position:
               
77-377
               

               
Cow position:
               
chr24:43374642-43374340 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
311
               

               
Alignm identity:
               
201
               

               
Alignm E-value:
               
7e-21
               

               
Alignm gaps (pig, cow):
               
65, 9
               

               
Conread position:
               
77-428
               

               
Cow position:
               
chr24:20942919-20943269 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
364
               

               
Alignm identity:
               
252
               

               
Alignm E-value:
               
5e-39
               

               
Alignm gaps (pig, cow):
               
64, 37
               

               
Conread position:
               
78-337
               

               
Cow position:
               
chr24:6487671-6487931 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
270
               

               
Alignm identity:
               
183
               

               
Alignm E-value:
               
1e-23
               

               
Alignm gaps (pig, cow):
               
67, 45
               

               
Conread position:
               
78-415
               

               
Cow position:
               
chr24:27824215-27824557 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
350
               

               
Alignm identity:
               
225
               

               
Alignm E-value:
               
3e-24
               

               
Alignm gaps (pig, cow):
               
65, 54
               

               
Conread position:
               
84-400
               

               
Cow position:
               
chr24:17943408-17943102 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
321
               

               
Alignm identity:
               
208
               

               
Alignm E-value:
               
3e-22
               

               
Alignm gaps (pig, cow):
               
74, 69
               

               
Conread position:
               
89-429
               

               
Cow position:
               
chr24:33222178-33221827 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
356
               

               
Alignm identity:
               
232
               

               
Alignm E-value:
               
1e-27
               

               
Alignm gaps (pig, cow):
               
65, 170
               

               
Conread position:
               
91-260
               

               
Cow position:
               
chr24:18695385-18695561 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
177
               

               
Alignm identity:
               
134
               

               
Alignm E-value:
               
2e-29
               

               
Alignm gaps (pig, cow):
               
62, 0
               

               
Conread position:
               
91-400
               

               
Cow position:
               
chr24:18343812-18344142 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
332
               

               
Alignm identity:
               
230
               

               
Alignm E-value:
               
1e-35
               

               
Alignm gaps (pig, cow):
               
56, 194
               

               
Conread position:
               
93-270
               

               
Cow position:
               
chr24:21918453-21918273 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
183
               

               
Alignm identity:
               
137
               

               
Alignm E-value:
               
5e-28
               

               
Alignm gaps (pig, cow):
               
12, 147
               

               
Conread position:
               
97-260
               

               
Cow position:
               
chr24:31388304-31388473 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
173
               

               
Alignm identity:
               
132
               

               
Alignm E-value:
               
4e-25
               

               
Alignm gaps (pig, cow):
               
48, 94
               

               
Conread position:
               
99-337
               

               
Cow position:
               
chr24:10841444-10841195 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
256
               

               
Alignm identity:
               
177
               

               
Alignm E-value:
               
8e-22
               

               
Alignm gaps (pig, cow):
               
41, 30
               

               
Conread position:
               
99-424
               

               
Cow position:
               
chr24:16509744-16510081 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
340
               

               
Alignm identity:
               
225
               

               
Alignm E-value:
               
6e-30
               

               
Alignm gaps (pig, cow):
               
39, 173
               

               
Conread position:
               
100-427
               

               
Cow position:
               
chr24:28327310-28326975 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
339
               

               
Alignm identity:
               
224
               

               
Alignm E-value:
               
2e-31
               

               
Alignm gaps (pig, cow):
               
54, 165
               

               
Conread position:
               
103-278
               

               
Cow position:
               
chr24:31382684-31382857 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
179
               

               
Alignm identity:
               
133
               

               
Alignm E-value:
               
1e-25
               

               
Alignm gaps (pig, cow):
               
136, 48
               

               
Conread position:
               
103-396
               

               
Cow position:
               
chr24:22224953-22225262 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
317
               

               
Alignm identity:
               
222
               

               
Alignm E-value:
               
1e-27
               

               
Alignm gaps (pig, cow):
               
42, 165
               

               
Conread position:
               
103-411
               

               
Cow position:
               
chr24:31036133-31036441 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
321
               

               
Alignm identity:
               
215
               

               
Alignm E-value:
               
4e-25
               

               
Alignm gaps (pig, cow):
               
54, 104
               

               
Conread position:
               
104-381
               

               
Cow position:
               
chr24:20250127-20249836 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
297
               

               
Alignm identity:
               
200
               

               
Alignm E-value:
               
1e-23
               

               
Alignm gaps (pig, cow):
               
41, 164
               

               
Conread position:
               
105-520
               

               
Cow position:
               
chr24:24457469-24457071 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
428
               

               
Alignm identity:
               
293
               

               
Alignm E-value:
               
5e-39
               

               
Alignm gaps (pig, cow):
               
28, 136
               

               
Conread position:
               
109-503
               

               
Cow position:
               
chr24:33465819-33465441 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
399
               

               
Alignm identity:
               
264
               

               
Alignm E-value:
               
1e-35
               

               
Alignm gaps (pig, cow):
               
77, 44
               

               
Conread position:
               
111-527
               

               
Cow position:
               
chr24:15373193-15373606 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
431
               

               
Alignm identity:
               
301
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
38, 81
               

               
Conread position:
               
112-408
               

               
Cow position:
               
chr24:30897747-30897450 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
304
               

               
Alignm identity:
               
201
               

               
Alignm E-value:
               
1e-26
               

               
Alignm gaps (pig, cow):
               
26, 15
               

               
Conread position:
               
113-270
               

               
Cow position:
               
chr24:41423402-41423561 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
162
               

               
Alignm identity:
               
122
               

               
Alignm E-value:
               
1e-24
               

               
Alignm gaps (pig, cow):
               
38, 16
               

               
Conread position:
               
113-400
               

               
Cow position:
               
chr24:7476564-7476275 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
299
               

               
Alignm identity:
               
198
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
36, 25
               

               
Conread position:
               
114-524
               

               
Cow position:
               
chr24:16895646-16895250 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
418
               

               
Alignm identity:
               
270
               

               
Alignm E-value:
               
7e-31
               

               
Alignm gaps (pig, cow):
               
13, 151
               

               
Conread position:
               
115-396
               

               
Cow position:
               
chr24:16645534-16645245 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
294
               

               
Alignm identity:
               
201
               

               
Alignm E-value:
               
7e-31
               

               
Alignm gaps (pig, cow):
               
65, 40
               

               
Conread position:
               
115-428
               

               
Cow position:
               
chr24:34008793-34008465 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
333
               

               
Alignm identity:
               
227
               

               
Alignm E-value:
               
2e-31
               

               
Alignm gaps (pig, cow):
               
24, 171
               

               
Conread position:
               
116-379
               

               
Cow position:
               
chr24:28253495-28253763 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
274
               

               
Alignm identity:
               
185
               

               
Alignm E-value:
               
1e-24
               

               
Alignm gaps (pig, cow):
               
33, 135
               

               
Conread position:
               
116-396
               

               
Cow position:
               
chr24:22079245-22079535 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
296
               

               
Alignm identity:
               
196
               

               
Alignm E-value:
               
9e-23
               

               
Alignm gaps (pig, cow):
               
27, 151
               

               
Conread position:
               
119-390
               

               
Cow position:
               
chr24:352813-352538 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
281
               

               
Alignm identity:
               
185
               

               
Alignm E-value:
               
9e-23
               

               
Alignm gaps (pig, cow):
               
34, 128
               

               
Conread position:
               
120-428
               

               
Cow position:
               
chr24:28990358-28990671 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
322
               

               
Alignm identity:
               
213
               

               
Alignm E-value:
               
3e-23
               

               
Alignm gaps (pig, cow):
               
25, 99
               

               
Conread position:
               
120-538
               

               
Cow position:
               
chr24:15707650-15707221 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
442
               

               
Alignm identity:
               
290
               

               
Alignm E-value:
               
2e-29
               

               
Alignm gaps (pig, cow):
               
28, 151
               

               
Conread position:
               
121-261
               

               
Cow position:
               
chr24:885889-885745 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
146
               

               
Alignm identity:
               
111
               

               
Alignm E-value:
               
3e-22
               

               
Alignm gaps (pig, cow):
               
32, 67
               

               
Conread position:
               
125-266
               

               
Cow position:
               
chr24:30226742-30226889 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
148
               

               
Alignm identity:
               
110
               

               
Alignm E-value:
               
7e-21
               

               
Alignm gaps (pig, cow):
               
30, 0
               

               
Conread position:
               
126-269
               

               
Cow position:
               
chr24:34579158-34579011 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
149
               

               
Alignm identity:
               
112
               

               
Alignm E-value:
               
8e-22
               

               
Alignm gaps (pig, cow):
               
30, 8
               

               
Conread position:
               
126-298
               

               
Cow position:
               
chr24:29708005-29707821 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
188
               

               
Alignm identity:
               
138
               

               
Alignm E-value:
               
7e-21
               

               
Alignm gaps (pig, cow):
               
27, 142
               

               
Conread position:
               
126-390
               

               
Cow position:
               
chr24:6132069-6131803 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
268
               

               
Alignm identity:
               
176
               

               
Alignm E-value:
               
4e-27
               

               
Alignm gaps (pig, cow):
               
12, 128
               

               
Conread position:
               
127-385
               

               
Cow position:
               
chr24:5633228-5632967 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
268
               

               
Alignm identity:
               
183
               

               
Alignm E-value:
               
1e-25
               

               
Alignm gaps (pig, cow):
               
11, 29
               

               
Conread position:
               
137-457
               

               
Cow position:
               
chr24:32070782-32071097 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
329
               

               
Alignm identity:
               
218
               

               
Alignm E-value:
               
4e-25
               

               
Alignm gaps (pig, cow):
               
14, 18
               

               
Conread position:
               
139-427
               

               
Cow position:
               
chr24:18017044-18017334 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
298
               

               
Alignm identity:
               
205
               

               
Alignm E-value:
               
2e-32
               

               
Alignm gaps (pig, cow):
               
9, 127
               

               
Conread position:
               
142-393
               

               
Cow position:
               
chr24:39143429-39143681 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
261
               

               
Alignm identity:
               
179
               

               
Alignm E-value:
               
1e-24
               

               
Alignm gaps (pig, cow):
               
44, 116
               

               
Conread position:
               
143-522
               

               
Cow position:
               
chr24:14171874-14171467 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
414
               

               
Alignm identity:
               
270
               

               
Alignm E-value:
               
3e-22
               

               
Alignm gaps (pig, cow):
               
13, 127
               

               
Conread position:
               
144-393
               

               
Cow position:
               
chr24:25092353-25092593 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
258
               

               
Alignm identity:
               
181
               

               
Alignm E-value:
               
4e-25
               

               
Alignm gaps (pig, cow):
               
40, 117
               

               
Conread position:
               
145-421
               

               
Cow position:
               
chr24:18357228-18356951 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
283
               

               
Alignm identity:
               
189
               

               
Alignm E-value:
               
1e-27
               

               
Alignm gaps (pig, cow):
               
90, 9
               

               
Conread position:
               
163-393
               

               
Cow position:
               
chr24:29586835-29587072 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
241
               

               
Alignm identity:
               
170
               

               
Alignm E-value:
               
4e-27
               

               
Alignm gaps (pig, cow):
               
21, 70
               

               
Conread position:
               
163-396
               

               
Cow position:
               
chr24:26554759-26554522 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
243
               

               
Alignm identity:
               
168
               

               
Alignm E-value:
               
3e-24
               

               
Alignm gaps (pig, cow):
               
22, 107
               

               
Conread position:
               
164-529
               

               
Cow position:
               
chr24:28289405-28289052 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
372
               

               
Alignm identity:
               
239
               

               
Alignm E-value:
               
1e-24
               

               
Alignm gaps (pig, cow):
               
74, 21
               

               
Conread position:
               
165-458
               

               
Cow position:
               
chr24:8006155-8006443 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
298
               

               
Alignm identity:
               
192
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
83, 70
               

               
Conread position:
               
179-425
               

               
Cow position:
               
chr24:28233907-28234146 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
251
               

               
Alignm identity:
               
171
               

               
Alignm E-value:
               
9e-23
               

               
Alignm gaps (pig, cow):
               
103, 56
               

               
Conread position:
               
196-428
               

               
Cow position:
               
chr24:39523572-39523341 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
240
               

               
Alignm identity:
               
165
               

               
Alignm E-value:
               
3e-22
               

               
Alignm gaps (pig, cow):
               
43, 70
               

               
Conread position:
               
196-529
               

               
Cow position:
               
chr24:39791414-39791742 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
341
               

               
Alignm identity:
               
227
               

               
Alignm E-value:
               
5e-29
               

               
Alignm gaps (pig, cow):
               
43, 72
               

               
Conread position:
               
218-520
               

               
Cow position:
               
chr24:30308660-30308355 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
309
               

               
Alignm identity:
               
196
               

               
Alignm E-value:
               
3e-23
               

               
Alignm gaps (pig, cow):
               
16, 39
               

               
Conread position:
               
325-524
               

               
Cow position:
               
chr24:39345372-39345169 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
207
               

               
Alignm identity:
               
143
               

               
Alignm E-value:
               
7e-21
               

               
Alignm gaps (pig, cow):
               
14, 24
               

               
Conread position:
               
348-532
               

               
Cow position:
               
chr24:40983157-40983341 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
186
               

               
Alignm identity:
               
135
               

               
Alignm E-value:
               
5e-29
               

               
Alignm gaps (pig, cow):
               
142, 101
               

               
Conread position:
               
396-524
               

               
Cow position:
               
chr24:7751124-7750998 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
129
               

               
Alignm identity:
               
98
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
39, 0
               

               
Conread position:
               
400-529
               

               
Cow position:
               
chr24:11960681-11960810 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
130
               

               
Alignm identity:
               
97
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
405-520
               

               
Cow position:
               
chr24:216810-216925 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
116
               

               
Alignm identity:
               
90
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
405-525
               

               
Cow position:
               
chr24:20839334-20839451 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
121
               

               
Alignm identity:
               
97
               

               
Alignm E-value:
               
3e-23
               

               
Alignm gaps (pig, cow):
               
86, 0
               
Show alignments to all cow chromosomes.