Cow genome map
| Conread name: | Pig3-SRG8027B03 |
| Conread position: | 1-490 |
| Cow position: | chr12:14660358-14660845 (view UCSC Genome Browser custom track) |
| Alignm length: | 495 |
| Alignm identity: | 342 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 11, 131 |
| Conread position: | 1-505 |
| Cow position: | chr12:29445720-29445221 (view UCSC Genome Browser custom track) |
| Alignm length: | 513 |
| Alignm identity: | 349 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 6, 197 |
| Conread position: | 2-458 |
| Cow position: | chr12:22518987-22519447 (view UCSC Genome Browser custom track) |
| Alignm length: | 469 |
| Alignm identity: | 337 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 10, 126 |
| Conread position: | 2-470 |
| Cow position: | chr12:21310254-21310715 (view UCSC Genome Browser custom track) |
| Alignm length: | 473 |
| Alignm identity: | 315 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 233, 10 |
| Conread position: | 2-476 |
| Cow position: | chr12:30677628-30677155 (view UCSC Genome Browser custom track) |
| Alignm length: | 488 |
| Alignm identity: | 327 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 36, 14 |
| Conread position: | 2-485 |
| Cow position: | chr12:19870874-19870397 (view UCSC Genome Browser custom track) |
| Alignm length: | 490 |
| Alignm identity: | 334 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 45, 89 |
| Conread position: | 2-505 |
| Cow position: | chr12:21091743-21092241 (view UCSC Genome Browser custom track) |
| Alignm length: | 518 |
| Alignm identity: | 352 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 45, 123 |
| Conread position: | 4-297 |
| Cow position: | chr12:32065853-32065568 (view UCSC Genome Browser custom track) |
| Alignm length: | 295 |
| Alignm identity: | 206 |
| Alignm E-value: | 2e-39 |
| Alignm gaps (pig, cow): | 42, 129 |
| Conread position: | 4-361 |
| Cow position: | chr12:18465853-18465517 (view UCSC Genome Browser custom track) |
| Alignm length: | 359 |
| Alignm identity: | 253 |
| Alignm E-value: | 2.8026e-45 |
| Alignm gaps (pig, cow): | 49, 90 |
| Conread position: | 4-394 |
| Cow position: | chr12:25267420-25267814 (view UCSC Genome Browser custom track) |
| Alignm length: | 399 |
| Alignm identity: | 288 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 43, 269 |
| Conread position: | 4-432 |
| Cow position: | chr12:43054479-43054895 (view UCSC Genome Browser custom track) |
| Alignm length: | 437 |
| Alignm identity: | 289 |
| Alignm E-value: | 4e-38 |
| Alignm gaps (pig, cow): | 43, 112 |
| Conread position: | 4-438 |
| Cow position: | chr12:21427601-21428040 (view UCSC Genome Browser custom track) |
| Alignm length: | 448 |
| Alignm identity: | 329 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 43, 199 |
| Conread position: | 4-484 |
| Cow position: | chr12:11100228-11099736 (view UCSC Genome Browser custom track) |
| Alignm length: | 499 |
| Alignm identity: | 353 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 42, 272 |
| Conread position: | 4-484 |
| Cow position: | chr12:27853973-27854455 (view UCSC Genome Browser custom track) |
| Alignm length: | 489 |
| Alignm identity: | 356 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 42, 312 |
| Conread position: | 4-484 |
| Cow position: | chr12:30685727-30685250 (view UCSC Genome Browser custom track) |
| Alignm length: | 491 |
| Alignm identity: | 342 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 42, 84 |
| Conread position: | 4-485 |
| Cow position: | chr12:1775961-1776454 (view UCSC Genome Browser custom track) |
| Alignm length: | 507 |
| Alignm identity: | 345 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 126, 43 |
| Conread position: | 4-485 |
| Cow position: | chr12:20461241-20461721 (view UCSC Genome Browser custom track) |
| Alignm length: | 487 |
| Alignm identity: | 357 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 42, 267 |
| Conread position: | 4-485 |
| Cow position: | chr12:20882103-20881614 (view UCSC Genome Browser custom track) |
| Alignm length: | 498 |
| Alignm identity: | 329 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 46, 80 |
| Conread position: | 4-485 |
| Cow position: | chr12:27930912-27931400 (view UCSC Genome Browser custom track) |
| Alignm length: | 497 |
| Alignm identity: | 356 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 25, 177 |
| Conread position: | 4-485 |
| Cow position: | chr12:35346505-35346039 (view UCSC Genome Browser custom track) |
| Alignm length: | 493 |
| Alignm identity: | 333 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 121, 37 |
| Conread position: | 4-485 |
| Cow position: | chr12:42857545-42858026 (view UCSC Genome Browser custom track) |
| Alignm length: | 492 |
| Alignm identity: | 347 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 42, 133 |
| Conread position: | 4-485 |
| Cow position: | chr12:48470905-48471378 (view UCSC Genome Browser custom track) |
| Alignm length: | 487 |
| Alignm identity: | 338 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 42, 188 |
| Conread position: | 4-490 |
| Cow position: | chr12:21252592-21253081 (view UCSC Genome Browser custom track) |
| Alignm length: | 497 |
| Alignm identity: | 352 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 37, 272 |
| Conread position: | 4-490 |
| Cow position: | chr12:21430000-21429513 (view UCSC Genome Browser custom track) |
| Alignm length: | 499 |
| Alignm identity: | 364 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 43, 209 |
| Conread position: | 4-490 |
| Cow position: | chr12:24993990-24994458 (view UCSC Genome Browser custom track) |
| Alignm length: | 500 |
| Alignm identity: | 356 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 43, 132 |
| Conread position: | 4-490 |
| Cow position: | chr12:25098487-25098969 (view UCSC Genome Browser custom track) |
| Alignm length: | 493 |
| Alignm identity: | 339 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 42, 199 |
| Conread position: | 4-490 |
| Cow position: | chr12:25261527-25262008 (view UCSC Genome Browser custom track) |
| Alignm length: | 499 |
| Alignm identity: | 362 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 46, 193 |
| Conread position: | 4-490 |
| Cow position: | chr12:34175335-34174847 (view UCSC Genome Browser custom track) |
| Alignm length: | 500 |
| Alignm identity: | 370 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 43, 209 |
| Conread position: | 4-490 |
| Cow position: | chr12:37560992-37560518 (view UCSC Genome Browser custom track) |
| Alignm length: | 493 |
| Alignm identity: | 352 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 43, 67 |
| Conread position: | 4-490 |
| Cow position: | chr12:42606260-42606746 (view UCSC Genome Browser custom track) |
| Alignm length: | 499 |
| Alignm identity: | 366 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 43, 28 |
| Conread position: | 4-498 |
| Cow position: | chr12:35633526-35634021 (view UCSC Genome Browser custom track) |
| Alignm length: | 505 |
| Alignm identity: | 333 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 46, 238 |
| Conread position: | 4-501 |
| Cow position: | chr12:3362924-3362430 (view UCSC Genome Browser custom track) |
| Alignm length: | 506 |
| Alignm identity: | 367 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 43, 218 |
| Conread position: | 4-502 |
| Cow position: | chr12:6404647-6405149 (view UCSC Genome Browser custom track) |
| Alignm length: | 510 |
| Alignm identity: | 363 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 42, 273 |
| Conread position: | 4-502 |
| Cow position: | chr12:21210655-21210151 (view UCSC Genome Browser custom track) |
| Alignm length: | 517 |
| Alignm identity: | 368 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 43, 78 |
| Conread position: | 4-509 |
| Cow position: | chr12:32655536-32655032 (view UCSC Genome Browser custom track) |
| Alignm length: | 520 |
| Alignm identity: | 367 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 43, 12 |
| Conread position: | 6-485 |
| Cow position: | chr12:15949825-15950298 (view UCSC Genome Browser custom track) |
| Alignm length: | 490 |
| Alignm identity: | 342 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 38, 6 |
| Conread position: | 16-342 |
| Cow position: | chr12:23101089-23101411 (view UCSC Genome Browser custom track) |
| Alignm length: | 328 |
| Alignm identity: | 208 |
| Alignm E-value: | 4e-27 |
| Alignm gaps (pig, cow): | 48, 78 |
| Conread position: | 16-378 |
| Cow position: | chr12:38344698-38345049 (view UCSC Genome Browser custom track) |
| Alignm length: | 368 |
| Alignm identity: | 243 |
| Alignm E-value: | 6e-31 |
| Alignm gaps (pig, cow): | 161, 36 |
| Conread position: | 26-493 |
| Cow position: | chr12:3209935-3209473 (view UCSC Genome Browser custom track) |
| Alignm length: | 473 |
| Alignm identity: | 318 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 24, 100 |
| Conread position: | 32-468 |
| Cow position: | chr12:486792-486343 (view UCSC Genome Browser custom track) |
| Alignm length: | 457 |
| Alignm identity: | 287 |
| Alignm E-value: | 1e-25 |
| Alignm gaps (pig, cow): | 102, 27 |
| Conread position: | 39-420 |
| Cow position: | chr12:33121365-33120980 (view UCSC Genome Browser custom track) |
| Alignm length: | 398 |
| Alignm identity: | 274 |
| Alignm E-value: | 1.99965e-42 |
| Alignm gaps (pig, cow): | 192, 42 |
| Conread position: | 45-502 |
| Cow position: | chr12:23160963-23161420 (view UCSC Genome Browser custom track) |
| Alignm length: | 465 |
| Alignm identity: | 317 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 185, 159 |
| Conread position: | 91-490 |
| Cow position: | chr12:22567854-22568248 (view UCSC Genome Browser custom track) |
| Alignm length: | 409 |
| Alignm identity: | 288 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 139, 182 |
| Conread position: | 108-328 |
| Cow position: | chr12:24976604-24976833 (view UCSC Genome Browser custom track) |
| Alignm length: | 232 |
| Alignm identity: | 160 |
| Alignm E-value: | 3e-24 |
| Alignm gaps (pig, cow): | 94, 18 |
| Conread position: | 113-444 |
| Cow position: | chr12:8138280-8138609 (view UCSC Genome Browser custom track) |
| Alignm length: | 341 |
| Alignm identity: | 227 |
| Alignm E-value: | 2e-30 |
| Alignm gaps (pig, cow): | 128, 91 |
| Conread position: | 127-501 |
| Cow position: | chr12:466401-466784 (view UCSC Genome Browser custom track) |
| Alignm length: | 395 |
| Alignm identity: | 272 |
| Alignm E-value: | 2e-40 |
| Alignm gaps (pig, cow): | 93, 17 |
| Conread position: | 134-305 |
| Cow position: | chr12:17980686-17980523 (view UCSC Genome Browser custom track) |
| Alignm length: | 172 |
| Alignm identity: | 128 |
| Alignm E-value: | 3e-24 |
| Alignm gaps (pig, cow): | 70, 0 |
| Conread position: | 227-502 |
| Cow position: | chr12:43913602-43913325 (view UCSC Genome Browser custom track) |
| Alignm length: | 284 |
| Alignm identity: | 197 |
| Alignm E-value: | 8e-33 |
| Alignm gaps (pig, cow): | 135, 28 |
| Conread position: | 229-485 |
| Cow position: | chr12:23140408-23140666 (view UCSC Genome Browser custom track) |
| Alignm length: | 265 |
| Alignm identity: | 180 |
| Alignm E-value: | 1e-24 |
| Alignm gaps (pig, cow): | 32, 40 |
| Conread position: | 244-485 |
| Cow position: | chr12:39038720-39038957 (view UCSC Genome Browser custom track) |
| Alignm length: | 245 |
| Alignm identity: | 169 |
| Alignm E-value: | 1e-26 |
| Alignm gaps (pig, cow): | 92, 68 |
Show alignments to all cow chromosomes.