Cow genome map
| Conread name: | Pig3-SRG8027B03 |
| Conread position: | 1-485 |
| Cow position: | chr13:21603487-21602998 (view UCSC Genome Browser custom track) |
| Alignm length: | 497 |
| Alignm identity: | 335 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 42, 31 |
| Conread position: | 1-485 |
| Cow position: | chr13:33334546-33335026 (view UCSC Genome Browser custom track) |
| Alignm length: | 495 |
| Alignm identity: | 347 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 11, 151 |
| Conread position: | 1-485 |
| Cow position: | chr13:34343684-34343195 (view UCSC Genome Browser custom track) |
| Alignm length: | 497 |
| Alignm identity: | 358 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 9, 276 |
| Conread position: | 2-484 |
| Cow position: | chr13:3482061-3482544 (view UCSC Genome Browser custom track) |
| Alignm length: | 502 |
| Alignm identity: | 344 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 108, 12 |
| Conread position: | 2-502 |
| Cow position: | chr13:11796933-11797440 (view UCSC Genome Browser custom track) |
| Alignm length: | 519 |
| Alignm identity: | 365 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 10, 90 |
| Conread position: | 4-262 |
| Cow position: | chr13:61084687-61084428 (view UCSC Genome Browser custom track) |
| Alignm length: | 261 |
| Alignm identity: | 182 |
| Alignm E-value: | 5e-37 |
| Alignm gaps (pig, cow): | 42, 226 |
| Conread position: | 4-292 |
| Cow position: | chr13:12566686-12566965 (view UCSC Genome Browser custom track) |
| Alignm length: | 298 |
| Alignm identity: | 205 |
| Alignm E-value: | 2e-27 |
| Alignm gaps (pig, cow): | 42, 32 |
| Conread position: | 4-381 |
| Cow position: | chr13:11388977-11388598 (view UCSC Genome Browser custom track) |
| Alignm length: | 386 |
| Alignm identity: | 283 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 45, 209 |
| Conread position: | 4-401 |
| Cow position: | chr13:53552756-53553155 (view UCSC Genome Browser custom track) |
| Alignm length: | 409 |
| Alignm identity: | 291 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 43, 175 |
| Conread position: | 4-414 |
| Cow position: | chr13:26845982-26845584 (view UCSC Genome Browser custom track) |
| Alignm length: | 419 |
| Alignm identity: | 307 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 43, 8 |
| Conread position: | 4-419 |
| Cow position: | chr13:3759857-3760277 (view UCSC Genome Browser custom track) |
| Alignm length: | 429 |
| Alignm identity: | 323 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 43, 209 |
| Conread position: | 4-432 |
| Cow position: | chr13:11246381-11246797 (view UCSC Genome Browser custom track) |
| Alignm length: | 437 |
| Alignm identity: | 287 |
| Alignm E-value: | 1e-33 |
| Alignm gaps (pig, cow): | 42, 59 |
| Conread position: | 4-435 |
| Cow position: | chr13:34050474-34050045 (view UCSC Genome Browser custom track) |
| Alignm length: | 437 |
| Alignm identity: | 342 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 44, 202 |
| Conread position: | 4-441 |
| Cow position: | chr13:34031364-34030927 (view UCSC Genome Browser custom track) |
| Alignm length: | 443 |
| Alignm identity: | 310 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 225, 216 |
| Conread position: | 4-479 |
| Cow position: | chr13:34939207-34938733 (view UCSC Genome Browser custom track) |
| Alignm length: | 485 |
| Alignm identity: | 347 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 43, 189 |
| Conread position: | 4-484 |
| Cow position: | chr13:42089924-42090403 (view UCSC Genome Browser custom track) |
| Alignm length: | 487 |
| Alignm identity: | 321 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 43, 129 |
| Conread position: | 4-485 |
| Cow position: | chr13:729001-728518 (view UCSC Genome Browser custom track) |
| Alignm length: | 494 |
| Alignm identity: | 338 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 46, 6 |
| Conread position: | 4-485 |
| Cow position: | chr13:4943157-4942674 (view UCSC Genome Browser custom track) |
| Alignm length: | 491 |
| Alignm identity: | 359 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 42, 270 |
| Conread position: | 4-485 |
| Cow position: | chr13:6666367-6666850 (view UCSC Genome Browser custom track) |
| Alignm length: | 490 |
| Alignm identity: | 351 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 44, 312 |
| Conread position: | 4-485 |
| Cow position: | chr13:13901636-13901157 (view UCSC Genome Browser custom track) |
| Alignm length: | 490 |
| Alignm identity: | 350 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 42, 213 |
| Conread position: | 4-485 |
| Cow position: | chr13:14401332-14401819 (view UCSC Genome Browser custom track) |
| Alignm length: | 494 |
| Alignm identity: | 349 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 42, 274 |
| Conread position: | 4-485 |
| Cow position: | chr13:43591082-43590608 (view UCSC Genome Browser custom track) |
| Alignm length: | 491 |
| Alignm identity: | 345 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 42, 167 |
| Conread position: | 4-485 |
| Cow position: | chr13:49494407-49494891 (view UCSC Genome Browser custom track) |
| Alignm length: | 497 |
| Alignm identity: | 360 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 46, 209 |
| Conread position: | 4-488 |
| Cow position: | chr13:11762868-11763346 (view UCSC Genome Browser custom track) |
| Alignm length: | 491 |
| Alignm identity: | 348 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 46, 115 |
| Conread position: | 4-489 |
| Cow position: | chr13:11739682-11739200 (view UCSC Genome Browser custom track) |
| Alignm length: | 499 |
| Alignm identity: | 327 |
| Alignm E-value: | 8.00001e-41 |
| Alignm gaps (pig, cow): | 42, 83 |
| Conread position: | 4-490 |
| Cow position: | chr13:5500226-5500714 (view UCSC Genome Browser custom track) |
| Alignm length: | 496 |
| Alignm identity: | 357 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 35, 270 |
| Conread position: | 4-490 |
| Cow position: | chr13:6358894-6358409 (view UCSC Genome Browser custom track) |
| Alignm length: | 499 |
| Alignm identity: | 364 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 43, 8 |
| Conread position: | 4-490 |
| Cow position: | chr13:13326692-13326212 (view UCSC Genome Browser custom track) |
| Alignm length: | 495 |
| Alignm identity: | 363 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 42, 56 |
| Conread position: | 4-490 |
| Cow position: | chr13:33524187-33524671 (view UCSC Genome Browser custom track) |
| Alignm length: | 496 |
| Alignm identity: | 358 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 43, 66 |
| Conread position: | 4-490 |
| Cow position: | chr13:49975448-49974951 (view UCSC Genome Browser custom track) |
| Alignm length: | 508 |
| Alignm identity: | 340 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 35, 155 |
| Conread position: | 4-490 |
| Cow position: | chr13:50111231-50110738 (view UCSC Genome Browser custom track) |
| Alignm length: | 503 |
| Alignm identity: | 367 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 43, 28 |
| Conread position: | 4-491 |
| Cow position: | chr13:22183560-22184057 (view UCSC Genome Browser custom track) |
| Alignm length: | 507 |
| Alignm identity: | 366 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 44, 209 |
| Conread position: | 4-500 |
| Cow position: | chr13:32735422-32735917 (view UCSC Genome Browser custom track) |
| Alignm length: | 507 |
| Alignm identity: | 370 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 227, 50 |
| Conread position: | 4-505 |
| Cow position: | chr13:21838441-21838943 (view UCSC Genome Browser custom track) |
| Alignm length: | 518 |
| Alignm identity: | 370 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 43, 94 |
| Conread position: | 4-505 |
| Cow position: | chr13:35759050-35758550 (view UCSC Genome Browser custom track) |
| Alignm length: | 511 |
| Alignm identity: | 364 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 42, 191 |
| Conread position: | 5-432 |
| Cow position: | chr13:19127875-19128295 (view UCSC Genome Browser custom track) |
| Alignm length: | 436 |
| Alignm identity: | 300 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 45, 7 |
| Conread position: | 7-386 |
| Cow position: | chr13:39166725-39166349 (view UCSC Genome Browser custom track) |
| Alignm length: | 387 |
| Alignm identity: | 244 |
| Alignm E-value: | 1e-24 |
| Alignm gaps (pig, cow): | 40, 7 |
| Conread position: | 11-316 |
| Cow position: | chr13:61953023-61952716 (view UCSC Genome Browser custom track) |
| Alignm length: | 313 |
| Alignm identity: | 237 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 39, 58 |
| Conread position: | 11-490 |
| Cow position: | chr13:60648040-60648520 (view UCSC Genome Browser custom track) |
| Alignm length: | 494 |
| Alignm identity: | 362 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 36, 204 |
| Conread position: | 12-485 |
| Cow position: | chr13:30304960-30304486 (view UCSC Genome Browser custom track) |
| Alignm length: | 484 |
| Alignm identity: | 346 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 34, 146 |
| Conread position: | 12-490 |
| Cow position: | chr13:34869726-34869257 (view UCSC Genome Browser custom track) |
| Alignm length: | 486 |
| Alignm identity: | 341 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 35, 116 |
| Conread position: | 13-362 |
| Cow position: | chr13:14523387-14523722 (view UCSC Genome Browser custom track) |
| Alignm length: | 352 |
| Alignm identity: | 254 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 37, 57 |
| Conread position: | 16-500 |
| Cow position: | chr13:48359370-48358897 (view UCSC Genome Browser custom track) |
| Alignm length: | 501 |
| Alignm identity: | 348 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 31, 52 |
| Conread position: | 23-505 |
| Cow position: | chr13:14177113-14177590 (view UCSC Genome Browser custom track) |
| Alignm length: | 498 |
| Alignm identity: | 344 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 27, 74 |
| Conread position: | 26-441 |
| Cow position: | chr13:36348399-36348806 (view UCSC Genome Browser custom track) |
| Alignm length: | 427 |
| Alignm identity: | 304 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 21, 111 |
| Conread position: | 32-485 |
| Cow position: | chr13:34040592-34041045 (view UCSC Genome Browser custom track) |
| Alignm length: | 464 |
| Alignm identity: | 332 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 18, 88 |
| Conread position: | 33-489 |
| Cow position: | chr13:31729163-31729616 (view UCSC Genome Browser custom track) |
| Alignm length: | 463 |
| Alignm identity: | 329 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 13, 239 |
| Conread position: | 34-297 |
| Cow position: | chr13:26408574-26408315 (view UCSC Genome Browser custom track) |
| Alignm length: | 270 |
| Alignm identity: | 182 |
| Alignm E-value: | 4e-24 |
| Alignm gaps (pig, cow): | 16, 92 |
| Conread position: | 49-490 |
| Cow position: | chr13:32983618-32984059 (view UCSC Genome Browser custom track) |
| Alignm length: | 449 |
| Alignm identity: | 319 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 172, 268 |
| Conread position: | 53-493 |
| Cow position: | chr13:43981374-43981807 (view UCSC Genome Browser custom track) |
| Alignm length: | 451 |
| Alignm identity: | 319 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 17, 59 |
| Conread position: | 54-371 |
| Cow position: | chr13:21851617-21851296 (view UCSC Genome Browser custom track) |
| Alignm length: | 328 |
| Alignm identity: | 216 |
| Alignm E-value: | 2e-26 |
| Alignm gaps (pig, cow): | 40, 175 |
| Conread position: | 56-327 |
| Cow position: | chr13:1634815-1634543 (view UCSC Genome Browser custom track) |
| Alignm length: | 278 |
| Alignm identity: | 201 |
| Alignm E-value: | 3.00004e-41 |
| Alignm gaps (pig, cow): | 60, 157 |
| Conread position: | 62-485 |
| Cow position: | chr13:50661959-50661564 (view UCSC Genome Browser custom track) |
| Alignm length: | 432 |
| Alignm identity: | 292 |
| Alignm E-value: | 9e-32 |
| Alignm gaps (pig, cow): | 64, 19 |
| Conread position: | 66-502 |
| Cow position: | chr13:60424448-60424022 (view UCSC Genome Browser custom track) |
| Alignm length: | 447 |
| Alignm identity: | 309 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 175, 44 |
| Conread position: | 83-505 |
| Cow position: | chr13:44752642-44752233 (view UCSC Genome Browser custom track) |
| Alignm length: | 426 |
| Alignm identity: | 265 |
| Alignm E-value: | 4e-25 |
| Alignm gaps (pig, cow): | 79, 41 |
| Conread position: | 109-493 |
| Cow position: | chr13:14186666-14186281 (view UCSC Genome Browser custom track) |
| Alignm length: | 395 |
| Alignm identity: | 285 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 17, 108 |
| Conread position: | 120-468 |
| Cow position: | chr13:9046404-9046065 (view UCSC Genome Browser custom track) |
| Alignm length: | 356 |
| Alignm identity: | 247 |
| Alignm E-value: | 6e-38 |
| Alignm gaps (pig, cow): | 29, 154 |
| Conread position: | 124-486 |
| Cow position: | chr13:37834670-37835039 (view UCSC Genome Browser custom track) |
| Alignm length: | 377 |
| Alignm identity: | 256 |
| Alignm E-value: | 2e-39 |
| Alignm gaps (pig, cow): | 33, 84 |
| Conread position: | 153-490 |
| Cow position: | chr13:50192776-50193110 (view UCSC Genome Browser custom track) |
| Alignm length: | 350 |
| Alignm identity: | 246 |
| Alignm E-value: | 2e-37 |
| Alignm gaps (pig, cow): | 78, 59 |
| Conread position: | 159-375 |
| Cow position: | chr13:20573802-20574024 (view UCSC Genome Browser custom track) |
| Alignm length: | 225 |
| Alignm identity: | 152 |
| Alignm E-value: | 9e-21 |
| Alignm gaps (pig, cow): | 25, 152 |
| Conread position: | 165-485 |
| Cow position: | chr13:9299057-9298735 (view UCSC Genome Browser custom track) |
| Alignm length: | 330 |
| Alignm identity: | 229 |
| Alignm E-value: | 2e-38 |
| Alignm gaps (pig, cow): | 13, 109 |
| Conread position: | 174-475 |
| Cow position: | chr13:30653824-30654131 (view UCSC Genome Browser custom track) |
| Alignm length: | 319 |
| Alignm identity: | 216 |
| Alignm E-value: | 1e-23 |
| Alignm gaps (pig, cow): | 57, 38 |
| Conread position: | 180-490 |
| Cow position: | chr13:679342-679036 (view UCSC Genome Browser custom track) |
| Alignm length: | 321 |
| Alignm identity: | 228 |
| Alignm E-value: | 1e-34 |
| Alignm gaps (pig, cow): | 50, 10 |
| Conread position: | 208-490 |
| Cow position: | chr13:21697834-21697549 (view UCSC Genome Browser custom track) |
| Alignm length: | 295 |
| Alignm identity: | 212 |
| Alignm E-value: | 4e-35 |
| Alignm gaps (pig, cow): | 23, 68 |
| Conread position: | 208-498 |
| Cow position: | chr13:5627281-5627572 (view UCSC Genome Browser custom track) |
| Alignm length: | 300 |
| Alignm identity: | 195 |
| Alignm E-value: | 9e-21 |
| Alignm gaps (pig, cow): | 32, 109 |
| Conread position: | 239-490 |
| Cow position: | chr13:42217149-42217397 (view UCSC Genome Browser custom track) |
| Alignm length: | 257 |
| Alignm identity: | 180 |
| Alignm E-value: | 7e-29 |
| Alignm gaps (pig, cow): | 97, 75 |
| Conread position: | 239-493 |
| Cow position: | chr13:11388530-11388277 (view UCSC Genome Browser custom track) |
| Alignm length: | 261 |
| Alignm identity: | 186 |
| Alignm E-value: | 3e-33 |
| Alignm gaps (pig, cow): | 26, 31 |
| Conread position: | 243-497 |
| Cow position: | chr13:3534361-3534614 (view UCSC Genome Browser custom track) |
| Alignm length: | 261 |
| Alignm identity: | 178 |
| Alignm E-value: | 5e-26 |
| Alignm gaps (pig, cow): | 63, 72 |
| Conread position: | 248-502 |
| Cow position: | chr13:11793554-11793817 (view UCSC Genome Browser custom track) |
| Alignm length: | 266 |
| Alignm identity: | 184 |
| Alignm E-value: | 2e-29 |
| Alignm gaps (pig, cow): | 114, 59 |
| Conread position: | 273-490 |
| Cow position: | chr13:17309962-17309748 (view UCSC Genome Browser custom track) |
| Alignm length: | 222 |
| Alignm identity: | 160 |
| Alignm E-value: | 2e-28 |
| Alignm gaps (pig, cow): | 63, 41 |
| Conread position: | 284-490 |
| Cow position: | chr13:60468915-60468711 (view UCSC Genome Browser custom track) |
| Alignm length: | 212 |
| Alignm identity: | 148 |
| Alignm E-value: | 9e-21 |
| Alignm gaps (pig, cow): | 52, 30 |
Show alignments to all cow chromosomes.