Cow genome map

Conread name: Pig3-SRG8027B03

Conread position: 1-366
Cow position: chr14:20705168-20704813 (view UCSC Genome Browser custom track)
Alignm length: 376
Alignm identity: 270
Alignm E-value: 0
Alignm gaps (pig, cow): 49, 72

Conread position: 1-432
Cow position: chr14:44690826-44690395 (view UCSC Genome Browser custom track)
Alignm length: 438
Alignm identity: 307
Alignm E-value: 0
Alignm gaps (pig, cow): 11, 203

Conread position: 1-467
Cow position: chr14:34998767-34998304 (view UCSC Genome Browser custom track)
Alignm length: 478
Alignm identity: 342
Alignm E-value: 0
Alignm gaps (pig, cow): 6, 175

Conread position: 1-485
Cow position: chr14:22029821-22030285 (view UCSC Genome Browser custom track)
Alignm length: 491
Alignm identity: 338
Alignm E-value: 0
Alignm gaps (pig, cow): 45, 109

Conread position: 1-499
Cow position: chr14:2295918-2295415 (view UCSC Genome Browser custom track)
Alignm length: 515
Alignm identity: 363
Alignm E-value: 0
Alignm gaps (pig, cow): 48, 36

Conread position: 2-324
Cow position: chr14:9520936-9521259 (view UCSC Genome Browser custom track)
Alignm length: 329
Alignm identity: 220
Alignm E-value: 9e-34
Alignm gaps (pig, cow): 11, 102

Conread position: 2-475
Cow position: chr14:41411397-41410922 (view UCSC Genome Browser custom track)
Alignm length: 490
Alignm identity: 341
Alignm E-value: 0
Alignm gaps (pig, cow): 10, 195

Conread position: 2-485
Cow position: chr14:44380998-44380513 (view UCSC Genome Browser custom track)
Alignm length: 497
Alignm identity: 342
Alignm E-value: 0
Alignm gaps (pig, cow): 10, 199

Conread position: 4-310
Cow position: chr14:22361641-22361345 (view UCSC Genome Browser custom track)
Alignm length: 308
Alignm identity: 214
Alignm E-value: 6e-40
Alignm gaps (pig, cow): 43, 66

Conread position: 4-378
Cow position: chr14:44228937-44228564 (view UCSC Genome Browser custom track)
Alignm length: 388
Alignm identity: 256
Alignm E-value: 2e-31
Alignm gaps (pig, cow): 43, 95

Conread position: 4-382
Cow position: chr14:30761266-30761661 (view UCSC Genome Browser custom track)
Alignm length: 399
Alignm identity: 283
Alignm E-value: 0
Alignm gaps (pig, cow): 45, 202

Conread position: 4-398
Cow position: chr14:13580004-13579616 (view UCSC Genome Browser custom track)
Alignm length: 405
Alignm identity: 286
Alignm E-value: 0
Alignm gaps (pig, cow): 43, 155

Conread position: 4-431
Cow position: chr14:25364875-25365294 (view UCSC Genome Browser custom track)
Alignm length: 434
Alignm identity: 292
Alignm E-value: 0
Alignm gaps (pig, cow): 46, 203

Conread position: 4-439
Cow position: chr14:33490478-33490045 (view UCSC Genome Browser custom track)
Alignm length: 446
Alignm identity: 342
Alignm E-value: 0
Alignm gaps (pig, cow): 107, 33

Conread position: 4-444
Cow position: chr14:33392277-33392723 (view UCSC Genome Browser custom track)
Alignm length: 454
Alignm identity: 333
Alignm E-value: 0
Alignm gaps (pig, cow): 43, 209

Conread position: 4-444
Cow position: chr14:42121935-42122375 (view UCSC Genome Browser custom track)
Alignm length: 449
Alignm identity: 336
Alignm E-value: 0
Alignm gaps (pig, cow): 42, 33

Conread position: 4-460
Cow position: chr14:30704500-30704974 (view UCSC Genome Browser custom track)
Alignm length: 480
Alignm identity: 332
Alignm E-value: 0
Alignm gaps (pig, cow): 43, 201

Conread position: 4-468
Cow position: chr14:30594707-30595171 (view UCSC Genome Browser custom track)
Alignm length: 477
Alignm identity: 338
Alignm E-value: 0
Alignm gaps (pig, cow): 44, 199

Conread position: 4-471
Cow position: chr14:45082763-45082293 (view UCSC Genome Browser custom track)
Alignm length: 481
Alignm identity: 341
Alignm E-value: 0
Alignm gaps (pig, cow): 43, 78

Conread position: 4-476
Cow position: chr14:34862268-34861802 (view UCSC Genome Browser custom track)
Alignm length: 486
Alignm identity: 345
Alignm E-value: 0
Alignm gaps (pig, cow): 25, 135

Conread position: 4-480
Cow position: chr14:5075583-5075111 (view UCSC Genome Browser custom track)
Alignm length: 483
Alignm identity: 341
Alignm E-value: 0
Alignm gaps (pig, cow): 49, 192

Conread position: 4-483
Cow position: chr14:5530705-5530224 (view UCSC Genome Browser custom track)
Alignm length: 489
Alignm identity: 358
Alignm E-value: 0
Alignm gaps (pig, cow): 42, 270

Conread position: 4-484
Cow position: chr14:7473997-7473517 (view UCSC Genome Browser custom track)
Alignm length: 491
Alignm identity: 356
Alignm E-value: 0
Alignm gaps (pig, cow): 46, 193

Conread position: 4-485
Cow position: chr14:191696-191209 (view UCSC Genome Browser custom track)
Alignm length: 494
Alignm identity: 359
Alignm E-value: 0
Alignm gaps (pig, cow): 42, 123

Conread position: 4-485
Cow position: chr14:12741401-12741872 (view UCSC Genome Browser custom track)
Alignm length: 487
Alignm identity: 348
Alignm E-value: 0
Alignm gaps (pig, cow): 42, 126

Conread position: 4-485
Cow position: chr14:13304603-13304117 (view UCSC Genome Browser custom track)
Alignm length: 491
Alignm identity: 342
Alignm E-value: 0
Alignm gaps (pig, cow): 42, 271

Conread position: 4-485
Cow position: chr14:13780596-13780116 (view UCSC Genome Browser custom track)
Alignm length: 490
Alignm identity: 351
Alignm E-value: 0
Alignm gaps (pig, cow): 42, 163

Conread position: 4-485
Cow position: chr14:16918085-16918551 (view UCSC Genome Browser custom track)
Alignm length: 488
Alignm identity: 344
Alignm E-value: 0
Alignm gaps (pig, cow): 42, 169

Conread position: 4-485
Cow position: chr14:32702512-32702012 (view UCSC Genome Browser custom track)
Alignm length: 505
Alignm identity: 317
Alignm E-value: 6e-30
Alignm gaps (pig, cow): 43, 83

Conread position: 4-485
Cow position: chr14:33712723-33712242 (view UCSC Genome Browser custom track)
Alignm length: 494
Alignm identity: 336
Alignm E-value: 0
Alignm gaps (pig, cow): 35, 8

Conread position: 4-485
Cow position: chr14:40167015-40167514 (view UCSC Genome Browser custom track)
Alignm length: 509
Alignm identity: 342
Alignm E-value: 0
Alignm gaps (pig, cow): 42, 212

Conread position: 4-485
Cow position: chr14:48252681-48253153 (view UCSC Genome Browser custom track)
Alignm length: 489
Alignm identity: 341
Alignm E-value: 0
Alignm gaps (pig, cow): 23, 105

Conread position: 4-489
Cow position: chr14:48826918-48826435 (view UCSC Genome Browser custom track)
Alignm length: 496
Alignm identity: 349
Alignm E-value: 0
Alignm gaps (pig, cow): 46, 173

Conread position: 4-490
Cow position: chr14:1660105-1659615 (view UCSC Genome Browser custom track)
Alignm length: 502
Alignm identity: 362
Alignm E-value: 0
Alignm gaps (pig, cow): 43, 212

Conread position: 4-490
Cow position: chr14:2287912-2287427 (view UCSC Genome Browser custom track)
Alignm length: 500
Alignm identity: 366
Alignm E-value: 0
Alignm gaps (pig, cow): 43, 209

Conread position: 4-490
Cow position: chr14:13862457-13862937 (view UCSC Genome Browser custom track)
Alignm length: 500
Alignm identity: 364
Alignm E-value: 0
Alignm gaps (pig, cow): 43, 23

Conread position: 4-490
Cow position: chr14:16807676-16808162 (view UCSC Genome Browser custom track)
Alignm length: 498
Alignm identity: 365
Alignm E-value: 0
Alignm gaps (pig, cow): 43, 209

Conread position: 4-490
Cow position: chr14:17489693-17490178 (view UCSC Genome Browser custom track)
Alignm length: 498
Alignm identity: 359
Alignm E-value: 0
Alignm gaps (pig, cow): 44, 209

Conread position: 4-490
Cow position: chr14:23255713-23256201 (view UCSC Genome Browser custom track)
Alignm length: 498
Alignm identity: 355
Alignm E-value: 0
Alignm gaps (pig, cow): 43, 188

Conread position: 4-490
Cow position: chr14:44290710-44290224 (view UCSC Genome Browser custom track)
Alignm length: 499
Alignm identity: 350
Alignm E-value: 0
Alignm gaps (pig, cow): 47, 142

Conread position: 4-491
Cow position: chr14:29046032-29046513 (view UCSC Genome Browser custom track)
Alignm length: 495
Alignm identity: 359
Alignm E-value: 0
Alignm gaps (pig, cow): 35, 210

Conread position: 4-494
Cow position: chr14:12612037-12611565 (view UCSC Genome Browser custom track)
Alignm length: 499
Alignm identity: 356
Alignm E-value: 0
Alignm gaps (pig, cow): 43, 8

Conread position: 4-502
Cow position: chr14:16999404-16999915 (view UCSC Genome Browser custom track)
Alignm length: 516
Alignm identity: 372
Alignm E-value: 0
Alignm gaps (pig, cow): 42, 65

Conread position: 4-502
Cow position: chr14:19326616-19327120 (view UCSC Genome Browser custom track)
Alignm length: 513
Alignm identity: 372
Alignm E-value: 0
Alignm gaps (pig, cow): 42, 116

Conread position: 4-502
Cow position: chr14:37225803-37225296 (view UCSC Genome Browser custom track)
Alignm length: 512
Alignm identity: 370
Alignm E-value: 0
Alignm gaps (pig, cow): 46, 270

Conread position: 4-502
Cow position: chr14:43556599-43556119 (view UCSC Genome Browser custom track)
Alignm length: 514
Alignm identity: 345
Alignm E-value: 6e-40
Alignm gaps (pig, cow): 51, 118

Conread position: 4-505
Cow position: chr14:38813836-38814352 (view UCSC Genome Browser custom track)
Alignm length: 524
Alignm identity: 377
Alignm E-value: 0
Alignm gaps (pig, cow): 45, 201

Conread position: 6-444
Cow position: chr14:20911558-20911119 (view UCSC Genome Browser custom track)
Alignm length: 452
Alignm identity: 312
Alignm E-value: 0
Alignm gaps (pig, cow): 41, 13

Conread position: 6-489
Cow position: chr14:29223430-29223924 (view UCSC Genome Browser custom track)
Alignm length: 509
Alignm identity: 354
Alignm E-value: 0
Alignm gaps (pig, cow): 166, 8

Conread position: 11-292
Cow position: chr14:14667489-14667770 (view UCSC Genome Browser custom track)
Alignm length: 289
Alignm identity: 201
Alignm E-value: 8e-33
Alignm gaps (pig, cow): 36, 86

Conread position: 11-292
Cow position: chr14:41476392-41476111 (view UCSC Genome Browser custom track)
Alignm length: 286
Alignm identity: 204
Alignm E-value: 6.99949e-42
Alignm gaps (pig, cow): 39, 79

Conread position: 11-485
Cow position: chr14:45188173-45188644 (view UCSC Genome Browser custom track)
Alignm length: 487
Alignm identity: 332
Alignm E-value: 0
Alignm gaps (pig, cow): 42, 49

Conread position: 11-490
Cow position: chr14:752205-751727 (view UCSC Genome Browser custom track)
Alignm length: 492
Alignm identity: 354
Alignm E-value: 0
Alignm gaps (pig, cow): 37, 202

Conread position: 12-485
Cow position: chr14:47939333-47939813 (view UCSC Genome Browser custom track)
Alignm length: 500
Alignm identity: 349
Alignm E-value: 0
Alignm gaps (pig, cow): 38, 108

Conread position: 13-437
Cow position: chr14:35383991-35384413 (view UCSC Genome Browser custom track)
Alignm length: 433
Alignm identity: 305
Alignm E-value: 0
Alignm gaps (pig, cow): 225, 144

Conread position: 14-485
Cow position: chr14:20784104-20783632 (view UCSC Genome Browser custom track)
Alignm length: 481
Alignm identity: 349
Alignm E-value: 0
Alignm gaps (pig, cow): 32, 217

Conread position: 19-504
Cow position: chr14:24523554-24523080 (view UCSC Genome Browser custom track)
Alignm length: 495
Alignm identity: 328
Alignm E-value: 9.80909e-45
Alignm gaps (pig, cow): 24, 88

Conread position: 27-490
Cow position: chr14:16342277-16342741 (view UCSC Genome Browser custom track)
Alignm length: 476
Alignm identity: 343
Alignm E-value: 0
Alignm gaps (pig, cow): 20, 186

Conread position: 27-509
Cow position: chr14:45086843-45086359 (view UCSC Genome Browser custom track)
Alignm length: 499
Alignm identity: 345
Alignm E-value: 0
Alignm gaps (pig, cow): 19, 188

Conread position: 28-464
Cow position: chr14:46390007-46390444 (view UCSC Genome Browser custom track)
Alignm length: 449
Alignm identity: 324
Alignm E-value: 0
Alignm gaps (pig, cow): 19, 186

Conread position: 32-438
Cow position: chr14:45710118-45710531 (view UCSC Genome Browser custom track)
Alignm length: 420
Alignm identity: 295
Alignm E-value: 0
Alignm gaps (pig, cow): 21, 174

Conread position: 48-505
Cow position: chr14:47643889-47643429 (view UCSC Genome Browser custom track)
Alignm length: 475
Alignm identity: 309
Alignm E-value: 3e-35
Alignm gaps (pig, cow): 112, 28

Conread position: 49-485
Cow position: chr14:18418092-18417666 (view UCSC Genome Browser custom track)
Alignm length: 446
Alignm identity: 303
Alignm E-value: 0
Alignm gaps (pig, cow): 192, 20

Conread position: 53-484
Cow position: chr14:35425710-35425282 (view UCSC Genome Browser custom track)
Alignm length: 443
Alignm identity: 307
Alignm E-value: 0
Alignm gaps (pig, cow): 102, 134

Conread position: 58-501
Cow position: chr14:39298873-39298452 (view UCSC Genome Browser custom track)
Alignm length: 451
Alignm identity: 298
Alignm E-value: 9e-34
Alignm gaps (pig, cow): 173, 71

Conread position: 64-432
Cow position: chr14:42312228-42311860 (view UCSC Genome Browser custom track)
Alignm length: 373
Alignm identity: 239
Alignm E-value: 3e-34
Alignm gaps (pig, cow): 84, 26

Conread position: 65-478
Cow position: chr14:44255191-44255607 (view UCSC Genome Browser custom track)
Alignm length: 436
Alignm identity: 294
Alignm E-value: 8e-33
Alignm gaps (pig, cow): 15, 222

Conread position: 71-440
Cow position: chr14:47656961-47656592 (view UCSC Genome Browser custom track)
Alignm length: 382
Alignm identity: 275
Alignm E-value: 0
Alignm gaps (pig, cow): 21, 30

Conread position: 75-490
Cow position: chr14:45670448-45670875 (view UCSC Genome Browser custom track)
Alignm length: 437
Alignm identity: 309
Alignm E-value: 0
Alignm gaps (pig, cow): 45, 145

Conread position: 81-467
Cow position: chr14:33678632-33678245 (view UCSC Genome Browser custom track)
Alignm length: 398
Alignm identity: 269
Alignm E-value: 2e-40
Alignm gaps (pig, cow): 55, 115

Conread position: 86-485
Cow position: chr14:45677527-45677923 (view UCSC Genome Browser custom track)
Alignm length: 410
Alignm identity: 301
Alignm E-value: 0
Alignm gaps (pig, cow): 218, 126

Conread position: 89-403
Cow position: chr14:13321491-13321800 (view UCSC Genome Browser custom track)
Alignm length: 324
Alignm identity: 222
Alignm E-value: 2e-32
Alignm gaps (pig, cow): 142, 37

Conread position: 93-502
Cow position: chr14:46403508-46403103 (view UCSC Genome Browser custom track)
Alignm length: 424
Alignm identity: 282
Alignm E-value: 9e-34
Alignm gaps (pig, cow): 30, 47

Conread position: 102-328
Cow position: chr14:25007631-25007418 (view UCSC Genome Browser custom track)
Alignm length: 228
Alignm identity: 158
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 212, 28

Conread position: 113-376
Cow position: chr14:13256949-13256683 (view UCSC Genome Browser custom track)
Alignm length: 272
Alignm identity: 192
Alignm E-value: 1e-34
Alignm gaps (pig, cow): 128, 31

Conread position: 114-485
Cow position: chr14:45027467-45027837 (view UCSC Genome Browser custom track)
Alignm length: 379
Alignm identity: 265
Alignm E-value: 0
Alignm gaps (pig, cow): 107, 62

Conread position: 114-500
Cow position: chr14:25693473-25693092 (view UCSC Genome Browser custom track)
Alignm length: 397
Alignm identity: 262
Alignm E-value: 9e-34
Alignm gaps (pig, cow): 127, 100

Conread position: 135-485
Cow position: chr14:11152638-11152988 (view UCSC Genome Browser custom track)
Alignm length: 360
Alignm identity: 244
Alignm E-value: 2e-38
Alignm gaps (pig, cow): 91, 77

Conread position: 136-500
Cow position: chr14:11654364-11654721 (view UCSC Genome Browser custom track)
Alignm length: 374
Alignm identity: 252
Alignm E-value: 8e-33
Alignm gaps (pig, cow): 85, 166

Conread position: 137-426
Cow position: chr14:17769628-17769913 (view UCSC Genome Browser custom track)
Alignm length: 295
Alignm identity: 193
Alignm E-value: 3e-23
Alignm gaps (pig, cow): 89, 82

Conread position: 144-502
Cow position: chr14:27978862-27978498 (view UCSC Genome Browser custom track)
Alignm length: 374
Alignm identity: 267
Alignm E-value: 0
Alignm gaps (pig, cow): 87, 68

Conread position: 178-468
Cow position: chr14:33675035-33674747 (view UCSC Genome Browser custom track)
Alignm length: 301
Alignm identity: 203
Alignm E-value: 9e-23
Alignm gaps (pig, cow): 48, 34

Conread position: 179-498
Cow position: chr14:9102998-9102683 (view UCSC Genome Browser custom track)
Alignm length: 328
Alignm identity: 220
Alignm E-value: 2e-28
Alignm gaps (pig, cow): 59, 33

Conread position: 180-485
Cow position: chr14:17610523-17610229 (view UCSC Genome Browser custom track)
Alignm length: 311
Alignm identity: 206
Alignm E-value: 3e-23
Alignm gaps (pig, cow): 146, 100

Conread position: 228-489
Cow position: chr14:26035231-26034978 (view UCSC Genome Browser custom track)
Alignm length: 265
Alignm identity: 180
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 36, 42

Conread position: 229-458
Cow position: chr14:30582982-30583212 (view UCSC Genome Browser custom track)
Alignm length: 236
Alignm identity: 165
Alignm E-value: 4e-26
Alignm gaps (pig, cow): 35, 40

Conread position: 239-479
Cow position: chr14:17687904-17687667 (view UCSC Genome Browser custom track)
Alignm length: 245
Alignm identity: 168
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 25, 31

Conread position: 239-485
Cow position: chr14:15274433-15274674 (view UCSC Genome Browser custom track)
Alignm length: 252
Alignm identity: 176
Alignm E-value: 4e-26
Alignm gaps (pig, cow): 25, 31

Conread position: 241-472
Cow position: chr14:20564241-20564465 (view UCSC Genome Browser custom track)
Alignm length: 236
Alignm identity: 162
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 95, 65

Conread position: 257-485
Cow position: chr14:37454552-37454782 (view UCSC Genome Browser custom track)
Alignm length: 236
Alignm identity: 163
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 48, 12

Conread position: 288-490
Cow position: chr14:12123823-12124022 (view UCSC Genome Browser custom track)
Alignm length: 208
Alignm identity: 148
Alignm E-value: 8e-22
Alignm gaps (pig, cow): 48, 26

Show alignments to all cow chromosomes.