Cow genome map
Conread name: | Pig3-SRG8027B03 |
Conread position: | 1-452 |
Cow position: | chr17:1882145-1881690 (view UCSC Genome Browser custom track) |
Alignm length: | 463 |
Alignm identity: | 325 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 11, 137 |
Conread position: | 2-296 |
Cow position: | chr17:1388175-1388467 (view UCSC Genome Browser custom track) |
Alignm length: | 301 |
Alignm identity: | 196 |
Alignm E-value: | 9e-24 |
Alignm gaps (pig, cow): | 44, 122 |
Conread position: | 2-441 |
Cow position: | chr17:4345713-4346144 (view UCSC Genome Browser custom track) |
Alignm length: | 446 |
Alignm identity: | 329 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 10, 130 |
Conread position: | 4-347 |
Cow position: | chr17:8210518-8210173 (view UCSC Genome Browser custom track) |
Alignm length: | 353 |
Alignm identity: | 266 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 43, 209 |
Conread position: | 4-369 |
Cow position: | chr17:34574620-34574254 (view UCSC Genome Browser custom track) |
Alignm length: | 375 |
Alignm identity: | 284 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 43, 209 |
Conread position: | 4-398 |
Cow position: | chr17:14215162-14215563 (view UCSC Genome Browser custom track) |
Alignm length: | 410 |
Alignm identity: | 289 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 43, 278 |
Conread position: | 4-399 |
Cow position: | chr17:45271242-45271641 (view UCSC Genome Browser custom track) |
Alignm length: | 408 |
Alignm identity: | 307 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 43, 209 |
Conread position: | 4-417 |
Cow position: | chr17:19266967-19267386 (view UCSC Genome Browser custom track) |
Alignm length: | 425 |
Alignm identity: | 314 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 42, 271 |
Conread position: | 4-417 |
Cow position: | chr17:34159605-34159187 (view UCSC Genome Browser custom track) |
Alignm length: | 424 |
Alignm identity: | 312 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 42, 272 |
Conread position: | 4-447 |
Cow position: | chr17:19980262-19980706 (view UCSC Genome Browser custom track) |
Alignm length: | 453 |
Alignm identity: | 328 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 43, 209 |
Conread position: | 4-459 |
Cow position: | chr17:14294679-14295139 (view UCSC Genome Browser custom track) |
Alignm length: | 472 |
Alignm identity: | 309 |
Alignm E-value: | 5e-39 |
Alignm gaps (pig, cow): | 46, 71 |
Conread position: | 4-469 |
Cow position: | chr17:2554398-2554865 (view UCSC Genome Browser custom track) |
Alignm length: | 477 |
Alignm identity: | 343 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 43, 65 |
Conread position: | 4-484 |
Cow position: | chr17:15327154-15326674 (view UCSC Genome Browser custom track) |
Alignm length: | 492 |
Alignm identity: | 348 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 42, 131 |
Conread position: | 4-485 |
Cow position: | chr17:4083880-4083413 (view UCSC Genome Browser custom track) |
Alignm length: | 493 |
Alignm identity: | 332 |
Alignm E-value: | 1.4013e-45 |
Alignm gaps (pig, cow): | 47, 20 |
Conread position: | 4-485 |
Cow position: | chr17:6070406-6069937 (view UCSC Genome Browser custom track) |
Alignm length: | 487 |
Alignm identity: | 352 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 42, 209 |
Conread position: | 4-485 |
Cow position: | chr17:15437661-15437178 (view UCSC Genome Browser custom track) |
Alignm length: | 492 |
Alignm identity: | 353 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 43, 209 |
Conread position: | 4-485 |
Cow position: | chr17:20490185-20489707 (view UCSC Genome Browser custom track) |
Alignm length: | 499 |
Alignm identity: | 355 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 33, 121 |
Conread position: | 4-485 |
Cow position: | chr17:28026630-28027110 (view UCSC Genome Browser custom track) |
Alignm length: | 491 |
Alignm identity: | 349 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 46, 270 |
Conread position: | 4-485 |
Cow position: | chr17:40806683-40806201 (view UCSC Genome Browser custom track) |
Alignm length: | 490 |
Alignm identity: | 354 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 42, 136 |
Conread position: | 4-490 |
Cow position: | chr17:40317-39830 (view UCSC Genome Browser custom track) |
Alignm length: | 500 |
Alignm identity: | 375 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 43, 209 |
Conread position: | 4-490 |
Cow position: | chr17:11784744-11784248 (view UCSC Genome Browser custom track) |
Alignm length: | 504 |
Alignm identity: | 360 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 43, 209 |
Conread position: | 4-490 |
Cow position: | chr17:14936096-14936581 (view UCSC Genome Browser custom track) |
Alignm length: | 499 |
Alignm identity: | 364 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 43, 210 |
Conread position: | 4-490 |
Cow position: | chr17:23322571-23323058 (view UCSC Genome Browser custom track) |
Alignm length: | 499 |
Alignm identity: | 369 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 43, 209 |
Conread position: | 4-490 |
Cow position: | chr17:24784038-24783552 (view UCSC Genome Browser custom track) |
Alignm length: | 496 |
Alignm identity: | 362 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 43, 123 |
Conread position: | 4-498 |
Cow position: | chr17:6121663-6121167 (view UCSC Genome Browser custom track) |
Alignm length: | 506 |
Alignm identity: | 372 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 43, 209 |
Conread position: | 4-500 |
Cow position: | chr17:20085904-20086399 (view UCSC Genome Browser custom track) |
Alignm length: | 511 |
Alignm identity: | 353 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 122, 33 |
Conread position: | 4-500 |
Cow position: | chr17:20098612-20099102 (view UCSC Genome Browser custom track) |
Alignm length: | 508 |
Alignm identity: | 348 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 43, 115 |
Conread position: | 4-502 |
Cow position: | chr17:136503-136002 (view UCSC Genome Browser custom track) |
Alignm length: | 513 |
Alignm identity: | 367 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 46, 126 |
Conread position: | 4-502 |
Cow position: | chr17:183448-182945 (view UCSC Genome Browser custom track) |
Alignm length: | 516 |
Alignm identity: | 374 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 43, 209 |
Conread position: | 4-502 |
Cow position: | chr17:2246212-2246714 (view UCSC Genome Browser custom track) |
Alignm length: | 512 |
Alignm identity: | 359 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 43, 125 |
Conread position: | 4-502 |
Cow position: | chr17:6261725-6261233 (view UCSC Genome Browser custom track) |
Alignm length: | 512 |
Alignm identity: | 364 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 46, 78 |
Conread position: | 4-502 |
Cow position: | chr17:27792909-27793409 (view UCSC Genome Browser custom track) |
Alignm length: | 511 |
Alignm identity: | 373 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 35, 8 |
Conread position: | 4-502 |
Cow position: | chr17:43990371-43989874 (view UCSC Genome Browser custom track) |
Alignm length: | 517 |
Alignm identity: | 369 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 43, 50 |
Conread position: | 6-310 |
Cow position: | chr17:240139-239833 (view UCSC Genome Browser custom track) |
Alignm length: | 312 |
Alignm identity: | 219 |
Alignm E-value: | 7.00649e-43 |
Alignm gaps (pig, cow): | 44, 6 |
Conread position: | 6-490 |
Cow position: | chr17:2170293-2169810 (view UCSC Genome Browser custom track) |
Alignm length: | 500 |
Alignm identity: | 362 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 206, 6 |
Conread position: | 6-490 |
Cow position: | chr17:4782939-4783432 (view UCSC Genome Browser custom track) |
Alignm length: | 506 |
Alignm identity: | 355 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 54, 6 |
Conread position: | 11-324 |
Cow position: | chr17:13690529-13690860 (view UCSC Genome Browser custom track) |
Alignm length: | 336 |
Alignm identity: | 236 |
Alignm E-value: | 1e-38 |
Alignm gaps (pig, cow): | 40, 209 |
Conread position: | 12-417 |
Cow position: | chr17:22561764-22561357 (view UCSC Genome Browser custom track) |
Alignm length: | 421 |
Alignm identity: | 298 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 23, 170 |
Conread position: | 12-489 |
Cow position: | chr17:20404274-20403810 (view UCSC Genome Browser custom track) |
Alignm length: | 489 |
Alignm identity: | 343 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 13, 68 |
Conread position: | 12-490 |
Cow position: | chr17:15141481-15141965 (view UCSC Genome Browser custom track) |
Alignm length: | 493 |
Alignm identity: | 337 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 36, 313 |
Conread position: | 12-490 |
Cow position: | chr17:29302634-29302146 (view UCSC Genome Browser custom track) |
Alignm length: | 499 |
Alignm identity: | 362 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 35, 197 |
Conread position: | 12-497 |
Cow position: | chr17:5999636-6000117 (view UCSC Genome Browser custom track) |
Alignm length: | 499 |
Alignm identity: | 348 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 38, 72 |
Conread position: | 12-502 |
Cow position: | chr17:3706958-3707417 (view UCSC Genome Browser custom track) |
Alignm length: | 499 |
Alignm identity: | 330 |
Alignm E-value: | 7e-33 |
Alignm gaps (pig, cow): | 20, 27 |
Conread position: | 14-480 |
Cow position: | chr17:15373060-15372611 (view UCSC Genome Browser custom track) |
Alignm length: | 472 |
Alignm identity: | 324 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 217, 33 |
Conread position: | 15-505 |
Cow position: | chr17:9751569-9751073 (view UCSC Genome Browser custom track) |
Alignm length: | 507 |
Alignm identity: | 350 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 35, 121 |
Conread position: | 19-490 |
Cow position: | chr17:39050079-39049605 (view UCSC Genome Browser custom track) |
Alignm length: | 487 |
Alignm identity: | 364 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 28, 194 |
Conread position: | 23-372 |
Cow position: | chr17:8069752-8070101 (view UCSC Genome Browser custom track) |
Alignm length: | 358 |
Alignm identity: | 249 |
Alignm E-value: | 7.9874e-44 |
Alignm gaps (pig, cow): | 10, 48 |
Conread position: | 24-468 |
Cow position: | chr17:22236402-22235950 (view UCSC Genome Browser custom track) |
Alignm length: | 459 |
Alignm identity: | 295 |
Alignm E-value: | 1e-37 |
Alignm gaps (pig, cow): | 23, 67 |
Conread position: | 26-416 |
Cow position: | chr17:17068177-17067793 (view UCSC Genome Browser custom track) |
Alignm length: | 400 |
Alignm identity: | 275 |
Alignm E-value: | 2.00386e-43 |
Alignm gaps (pig, cow): | 24, 87 |
Conread position: | 26-440 |
Cow position: | chr17:19367128-19366694 (view UCSC Genome Browser custom track) |
Alignm length: | 440 |
Alignm identity: | 310 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 21, 103 |
Conread position: | 29-323 |
Cow position: | chr17:6077950-6077664 (view UCSC Genome Browser custom track) |
Alignm length: | 297 |
Alignm identity: | 208 |
Alignm E-value: | 1e-38 |
Alignm gaps (pig, cow): | 212, 113 |
Conread position: | 32-328 |
Cow position: | chr17:4169005-4168709 (view UCSC Genome Browser custom track) |
Alignm length: | 303 |
Alignm identity: | 204 |
Alignm E-value: | 2e-30 |
Alignm gaps (pig, cow): | 15, 68 |
Conread position: | 32-400 |
Cow position: | chr17:31534954-31534578 (view UCSC Genome Browser custom track) |
Alignm length: | 383 |
Alignm identity: | 262 |
Alignm E-value: | 1.99965e-42 |
Alignm gaps (pig, cow): | 21, 62 |
Conread position: | 66-490 |
Cow position: | chr17:17256876-17257300 (view UCSC Genome Browser custom track) |
Alignm length: | 435 |
Alignm identity: | 317 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 165, 138 |
Conread position: | 69-368 |
Cow position: | chr17:33283879-33284180 (view UCSC Genome Browser custom track) |
Alignm length: | 309 |
Alignm identity: | 216 |
Alignm E-value: | 1e-37 |
Alignm gaps (pig, cow): | 61, 137 |
Conread position: | 90-491 |
Cow position: | chr17:2150167-2149790 (view UCSC Genome Browser custom track) |
Alignm length: | 402 |
Alignm identity: | 261 |
Alignm E-value: | 2e-30 |
Alignm gaps (pig, cow): | 41, 0 |
Conread position: | 100-403 |
Cow position: | chr17:44925566-44925867 (view UCSC Genome Browser custom track) |
Alignm length: | 311 |
Alignm identity: | 212 |
Alignm E-value: | 7e-33 |
Alignm gaps (pig, cow): | 52, 103 |
Conread position: | 102-309 |
Cow position: | chr17:3283571-3283375 (view UCSC Genome Browser custom track) |
Alignm length: | 210 |
Alignm identity: | 151 |
Alignm E-value: | 3e-24 |
Alignm gaps (pig, cow): | 82, 111 |
Conread position: | 114-463 |
Cow position: | chr17:6627055-6626720 (view UCSC Genome Browser custom track) |
Alignm length: | 353 |
Alignm identity: | 227 |
Alignm E-value: | 2e-21 |
Alignm gaps (pig, cow): | 150, 14 |
Conread position: | 114-490 |
Cow position: | chr17:2263905-2263529 (view UCSC Genome Browser custom track) |
Alignm length: | 385 |
Alignm identity: | 272 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 105, 159 |
Conread position: | 114-490 |
Cow position: | chr17:13967692-13967317 (view UCSC Genome Browser custom track) |
Alignm length: | 385 |
Alignm identity: | 268 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 107, 159 |
Conread position: | 116-325 |
Cow position: | chr17:1705128-1704921 (view UCSC Genome Browser custom track) |
Alignm length: | 217 |
Alignm identity: | 154 |
Alignm E-value: | 8e-23 |
Alignm gaps (pig, cow): | 114, 18 |
Conread position: | 118-375 |
Cow position: | chr17:2175683-2175423 (view UCSC Genome Browser custom track) |
Alignm length: | 267 |
Alignm identity: | 197 |
Alignm E-value: | 5e-39 |
Alignm gaps (pig, cow): | 33, 85 |
Conread position: | 119-444 |
Cow position: | chr17:20414699-20415028 (view UCSC Genome Browser custom track) |
Alignm length: | 338 |
Alignm identity: | 243 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 112, 93 |
Conread position: | 119-490 |
Cow position: | chr17:34157881-34157512 (view UCSC Genome Browser custom track) |
Alignm length: | 382 |
Alignm identity: | 278 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 112, 71 |
Conread position: | 124-505 |
Cow position: | chr17:3640149-3640534 (view UCSC Genome Browser custom track) |
Alignm length: | 393 |
Alignm identity: | 272 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 108, 149 |
Conread position: | 130-505 |
Cow position: | chr17:11085977-11086356 (view UCSC Genome Browser custom track) |
Alignm length: | 388 |
Alignm identity: | 273 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 101, 74 |
Conread position: | 133-310 |
Cow position: | chr17:18589961-18589781 (view UCSC Genome Browser custom track) |
Alignm length: | 184 |
Alignm identity: | 138 |
Alignm E-value: | 4e-28 |
Alignm gaps (pig, cow): | 107, 67 |
Conread position: | 185-490 |
Cow position: | chr17:5228317-5228013 (view UCSC Genome Browser custom track) |
Alignm length: | 315 |
Alignm identity: | 206 |
Alignm E-value: | 8e-23 |
Alignm gaps (pig, cow): | 40, 17 |
Conread position: | 239-490 |
Cow position: | chr17:9079783-9080030 (view UCSC Genome Browser custom track) |
Alignm length: | 256 |
Alignm identity: | 181 |
Alignm E-value: | 2e-31 |
Alignm gaps (pig, cow): | 26, 31 |
Conread position: | 247-485 |
Cow position: | chr17:3654659-3654895 (view UCSC Genome Browser custom track) |
Alignm length: | 243 |
Alignm identity: | 172 |
Alignm E-value: | 6e-31 |
Alignm gaps (pig, cow): | 18, 23 |
Conread position: | 247-501 |
Cow position: | chr17:42267286-42267035 (view UCSC Genome Browser custom track) |
Alignm length: | 259 |
Alignm identity: | 175 |
Alignm E-value: | 1e-24 |
Alignm gaps (pig, cow): | 17, 23 |
Show alignments to all cow chromosomes.