Cow genome map
| Conread name: | Pig3-SRG8027B03 |
| Conread position: | 1-485 |
| Cow position: | chr18:29864522-29865008 (view UCSC Genome Browser custom track) |
| Alignm length: | 495 |
| Alignm identity: | 361 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 8, 274 |
| Conread position: | 1-485 |
| Cow position: | chr18:51482943-51482458 (view UCSC Genome Browser custom track) |
| Alignm length: | 499 |
| Alignm identity: | 366 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 12, 201 |
| Conread position: | 4-296 |
| Cow position: | chr18:9722709-9722413 (view UCSC Genome Browser custom track) |
| Alignm length: | 301 |
| Alignm identity: | 231 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 43, 209 |
| Conread position: | 4-297 |
| Cow position: | chr18:27836000-27836297 (view UCSC Genome Browser custom track) |
| Alignm length: | 299 |
| Alignm identity: | 222 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 42, 270 |
| Conread position: | 4-298 |
| Cow position: | chr18:37701407-37701705 (view UCSC Genome Browser custom track) |
| Alignm length: | 300 |
| Alignm identity: | 225 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 43, 269 |
| Conread position: | 4-304 |
| Cow position: | chr18:16464776-16465080 (view UCSC Genome Browser custom track) |
| Alignm length: | 309 |
| Alignm identity: | 233 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 43, 209 |
| Conread position: | 4-310 |
| Cow position: | chr18:5078017-5078321 (view UCSC Genome Browser custom track) |
| Alignm length: | 309 |
| Alignm identity: | 245 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 43, 150 |
| Conread position: | 4-310 |
| Cow position: | chr18:12238506-12238216 (view UCSC Genome Browser custom track) |
| Alignm length: | 312 |
| Alignm identity: | 219 |
| Alignm E-value: | 1e-33 |
| Alignm gaps (pig, cow): | 44, 20 |
| Conread position: | 4-310 |
| Cow position: | chr18:35290736-35290429 (view UCSC Genome Browser custom track) |
| Alignm length: | 316 |
| Alignm identity: | 244 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 42, 178 |
| Conread position: | 4-314 |
| Cow position: | chr18:34044903-34044601 (view UCSC Genome Browser custom track) |
| Alignm length: | 317 |
| Alignm identity: | 224 |
| Alignm E-value: | 2e-39 |
| Alignm gaps (pig, cow): | 48, 123 |
| Conread position: | 4-327 |
| Cow position: | chr18:999537-999222 (view UCSC Genome Browser custom track) |
| Alignm length: | 331 |
| Alignm identity: | 244 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 44, 120 |
| Conread position: | 4-342 |
| Cow position: | chr18:18853301-18852962 (view UCSC Genome Browser custom track) |
| Alignm length: | 345 |
| Alignm identity: | 239 |
| Alignm E-value: | 4.2039e-45 |
| Alignm gaps (pig, cow): | 42, 18 |
| Conread position: | 4-351 |
| Cow position: | chr18:37583822-37584171 (view UCSC Genome Browser custom track) |
| Alignm length: | 357 |
| Alignm identity: | 274 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 43, 209 |
| Conread position: | 4-368 |
| Cow position: | chr18:52713133-52712769 (view UCSC Genome Browser custom track) |
| Alignm length: | 373 |
| Alignm identity: | 248 |
| Alignm E-value: | 2e-37 |
| Alignm gaps (pig, cow): | 47, 209 |
| Conread position: | 4-415 |
| Cow position: | chr18:46875287-46875698 (view UCSC Genome Browser custom track) |
| Alignm length: | 422 |
| Alignm identity: | 317 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 43, 67 |
| Conread position: | 4-428 |
| Cow position: | chr18:23660413-23660844 (view UCSC Genome Browser custom track) |
| Alignm length: | 440 |
| Alignm identity: | 325 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 35, 212 |
| Conread position: | 4-471 |
| Cow position: | chr18:32165844-32166307 (view UCSC Genome Browser custom track) |
| Alignm length: | 475 |
| Alignm identity: | 339 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 43, 284 |
| Conread position: | 4-471 |
| Cow position: | chr18:37664372-37663925 (view UCSC Genome Browser custom track) |
| Alignm length: | 474 |
| Alignm identity: | 332 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 46, 117 |
| Conread position: | 4-471 |
| Cow position: | chr18:38347107-38346642 (view UCSC Genome Browser custom track) |
| Alignm length: | 479 |
| Alignm identity: | 316 |
| Alignm E-value: | 3.00018e-42 |
| Alignm gaps (pig, cow): | 42, 94 |
| Conread position: | 4-473 |
| Cow position: | chr18:14422352-14421890 (view UCSC Genome Browser custom track) |
| Alignm length: | 479 |
| Alignm identity: | 315 |
| Alignm E-value: | 2.94273e-44 |
| Alignm gaps (pig, cow): | 33, 37 |
| Conread position: | 4-483 |
| Cow position: | chr18:11272773-11273253 (view UCSC Genome Browser custom track) |
| Alignm length: | 492 |
| Alignm identity: | 357 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 43, 209 |
| Conread position: | 4-485 |
| Cow position: | chr18:5535091-5534612 (view UCSC Genome Browser custom track) |
| Alignm length: | 488 |
| Alignm identity: | 340 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 42, 26 |
| Conread position: | 4-485 |
| Cow position: | chr18:14418054-14417569 (view UCSC Genome Browser custom track) |
| Alignm length: | 494 |
| Alignm identity: | 357 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 46, 201 |
| Conread position: | 4-485 |
| Cow position: | chr18:27989271-27988788 (view UCSC Genome Browser custom track) |
| Alignm length: | 494 |
| Alignm identity: | 359 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 42, 199 |
| Conread position: | 4-485 |
| Cow position: | chr18:33270980-33270510 (view UCSC Genome Browser custom track) |
| Alignm length: | 496 |
| Alignm identity: | 353 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 43, 54 |
| Conread position: | 4-485 |
| Cow position: | chr18:35372690-35373164 (view UCSC Genome Browser custom track) |
| Alignm length: | 496 |
| Alignm identity: | 343 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 229, 43 |
| Conread position: | 4-485 |
| Cow position: | chr18:36510702-36510219 (view UCSC Genome Browser custom track) |
| Alignm length: | 490 |
| Alignm identity: | 349 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 42, 270 |
| Conread position: | 4-485 |
| Cow position: | chr18:37490907-37490430 (view UCSC Genome Browser custom track) |
| Alignm length: | 493 |
| Alignm identity: | 358 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 46, 148 |
| Conread position: | 4-485 |
| Cow position: | chr18:37508047-37507565 (view UCSC Genome Browser custom track) |
| Alignm length: | 491 |
| Alignm identity: | 358 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 42, 123 |
| Conread position: | 4-485 |
| Cow position: | chr18:40483081-40482599 (view UCSC Genome Browser custom track) |
| Alignm length: | 490 |
| Alignm identity: | 351 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 42, 298 |
| Conread position: | 4-490 |
| Cow position: | chr18:19354452-19353965 (view UCSC Genome Browser custom track) |
| Alignm length: | 496 |
| Alignm identity: | 361 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 43, 270 |
| Conread position: | 4-490 |
| Cow position: | chr18:24618218-24617731 (view UCSC Genome Browser custom track) |
| Alignm length: | 500 |
| Alignm identity: | 366 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 42, 201 |
| Conread position: | 4-496 |
| Cow position: | chr18:19486241-19485733 (view UCSC Genome Browser custom track) |
| Alignm length: | 515 |
| Alignm identity: | 361 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 46, 134 |
| Conread position: | 4-498 |
| Cow position: | chr18:54272531-54272036 (view UCSC Genome Browser custom track) |
| Alignm length: | 506 |
| Alignm identity: | 348 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 44, 123 |
| Conread position: | 4-502 |
| Cow position: | chr18:47743576-47743087 (view UCSC Genome Browser custom track) |
| Alignm length: | 511 |
| Alignm identity: | 362 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 43, 273 |
| Conread position: | 4-505 |
| Cow position: | chr18:15857268-15856779 (view UCSC Genome Browser custom track) |
| Alignm length: | 513 |
| Alignm identity: | 356 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 238, 50 |
| Conread position: | 4-505 |
| Cow position: | chr18:46866830-46867330 (view UCSC Genome Browser custom track) |
| Alignm length: | 518 |
| Alignm identity: | 372 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 24, 173 |
| Conread position: | 6-505 |
| Cow position: | chr18:16392041-16392534 (view UCSC Genome Browser custom track) |
| Alignm length: | 523 |
| Alignm identity: | 377 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 41, 78 |
| Conread position: | 11-370 |
| Cow position: | chr18:41838712-41839072 (view UCSC Genome Browser custom track) |
| Alignm length: | 365 |
| Alignm identity: | 269 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 35, 188 |
| Conread position: | 12-505 |
| Cow position: | chr18:51274008-51274503 (view UCSC Genome Browser custom track) |
| Alignm length: | 507 |
| Alignm identity: | 368 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 34, 65 |
| Conread position: | 13-323 |
| Cow position: | chr18:18494959-18495263 (view UCSC Genome Browser custom track) |
| Alignm length: | 314 |
| Alignm identity: | 217 |
| Alignm E-value: | 6e-39 |
| Alignm gaps (pig, cow): | 33, 98 |
| Conread position: | 19-484 |
| Cow position: | chr18:20836259-20835799 (view UCSC Genome Browser custom track) |
| Alignm length: | 480 |
| Alignm identity: | 317 |
| Alignm E-value: | 6e-39 |
| Alignm gaps (pig, cow): | 30, 5 |
| Conread position: | 26-413 |
| Cow position: | chr18:54169464-54169851 (view UCSC Genome Browser custom track) |
| Alignm length: | 406 |
| Alignm identity: | 267 |
| Alignm E-value: | 1e-25 |
| Alignm gaps (pig, cow): | 21, 118 |
| Conread position: | 31-489 |
| Cow position: | chr18:51594047-51593599 (view UCSC Genome Browser custom track) |
| Alignm length: | 465 |
| Alignm identity: | 304 |
| Alignm E-value: | 3.00018e-42 |
| Alignm gaps (pig, cow): | 18, 167 |
| Conread position: | 32-360 |
| Cow position: | chr18:1046330-1046005 (view UCSC Genome Browser custom track) |
| Alignm length: | 335 |
| Alignm identity: | 250 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 15, 93 |
| Conread position: | 32-428 |
| Cow position: | chr18:54107162-54106755 (view UCSC Genome Browser custom track) |
| Alignm length: | 411 |
| Alignm identity: | 282 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 14, 181 |
| Conread position: | 45-467 |
| Cow position: | chr18:42516664-42516246 (view UCSC Genome Browser custom track) |
| Alignm length: | 431 |
| Alignm identity: | 325 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 155, 42 |
| Conread position: | 64-484 |
| Cow position: | chr18:12993097-12992695 (view UCSC Genome Browser custom track) |
| Alignm length: | 425 |
| Alignm identity: | 289 |
| Alignm E-value: | 2.99878e-43 |
| Alignm gaps (pig, cow): | 156, 17 |
| Conread position: | 91-475 |
| Cow position: | chr18:29238882-29238495 (view UCSC Genome Browser custom track) |
| Alignm length: | 394 |
| Alignm identity: | 274 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 140, 218 |
| Conread position: | 91-505 |
| Cow position: | chr18:25365165-25364744 (view UCSC Genome Browser custom track) |
| Alignm length: | 429 |
| Alignm identity: | 288 |
| Alignm E-value: | 9.80909e-45 |
| Alignm gaps (pig, cow): | 140, 113 |
| Conread position: | 126-505 |
| Cow position: | chr18:24714225-24714609 (view UCSC Genome Browser custom track) |
| Alignm length: | 392 |
| Alignm identity: | 275 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 109, 86 |
| Conread position: | 136-490 |
| Cow position: | chr18:51343635-51343281 (view UCSC Genome Browser custom track) |
| Alignm length: | 365 |
| Alignm identity: | 260 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 95, 68 |
| Conread position: | 150-471 |
| Cow position: | chr18:48469243-48469564 (view UCSC Genome Browser custom track) |
| Alignm length: | 332 |
| Alignm identity: | 230 |
| Alignm E-value: | 1e-36 |
| Alignm gaps (pig, cow): | 88, 63 |
| Conread position: | 228-502 |
| Cow position: | chr18:51461193-51461470 (view UCSC Genome Browser custom track) |
| Alignm length: | 285 |
| Alignm identity: | 204 |
| Alignm E-value: | 1e-35 |
| Alignm gaps (pig, cow): | 36, 42 |
| Conread position: | 232-502 |
| Cow position: | chr18:28972033-28972306 (view UCSC Genome Browser custom track) |
| Alignm length: | 280 |
| Alignm identity: | 194 |
| Alignm E-value: | 7e-30 |
| Alignm gaps (pig, cow): | 32, 38 |
| Conread position: | 239-485 |
| Cow position: | chr18:16089966-16089722 (view UCSC Genome Browser custom track) |
| Alignm length: | 251 |
| Alignm identity: | 176 |
| Alignm E-value: | 7e-31 |
| Alignm gaps (pig, cow): | 115, 73 |
| Conread position: | 242-505 |
| Cow position: | chr18:51695546-51695279 (view UCSC Genome Browser custom track) |
| Alignm length: | 273 |
| Alignm identity: | 197 |
| Alignm E-value: | 2e-37 |
| Alignm gaps (pig, cow): | 94, 64 |
| Conread position: | 247-485 |
| Cow position: | chr18:35054962-35054731 (view UCSC Genome Browser custom track) |
| Alignm length: | 241 |
| Alignm identity: | 167 |
| Alignm E-value: | 1e-25 |
| Alignm gaps (pig, cow): | 17, 22 |
| Conread position: | 247-490 |
| Cow position: | chr18:27538701-27538461 (view UCSC Genome Browser custom track) |
| Alignm length: | 249 |
| Alignm identity: | 179 |
| Alignm E-value: | 8e-32 |
| Alignm gaps (pig, cow): | 17, 23 |
| Conread position: | 307-444 |
| Cow position: | chr18:12237956-12237822 (view UCSC Genome Browser custom track) |
| Alignm length: | 139 |
| Alignm identity: | 106 |
| Alignm E-value: | 3e-21 |
| Alignm gaps (pig, cow): | 122, 68 |
Show alignments to all cow chromosomes.