Cow genome map
| Conread name: | Pig3-SRG8027B03 |
| Conread position: | 1-485 |
| Cow position: | chr20:5536987-5536512 (view UCSC Genome Browser custom track) |
| Alignm length: | 492 |
| Alignm identity: | 354 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 11, 177 |
| Conread position: | 1-491 |
| Cow position: | chr20:35126718-35126223 (view UCSC Genome Browser custom track) |
| Alignm length: | 509 |
| Alignm identity: | 365 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 8, 281 |
| Conread position: | 1-502 |
| Cow position: | chr20:15095837-15096348 (view UCSC Genome Browser custom track) |
| Alignm length: | 520 |
| Alignm identity: | 360 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 8, 37 |
| Conread position: | 2-328 |
| Cow position: | chr20:12693113-12692784 (view UCSC Genome Browser custom track) |
| Alignm length: | 338 |
| Alignm identity: | 252 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 5, 94 |
| Conread position: | 2-361 |
| Cow position: | chr20:8215214-8215554 (view UCSC Genome Browser custom track) |
| Alignm length: | 362 |
| Alignm identity: | 252 |
| Alignm E-value: | 1.99993e-41 |
| Alignm gaps (pig, cow): | 39, 10 |
| Conread position: | 3-429 |
| Cow position: | chr20:5226481-5226892 (view UCSC Genome Browser custom track) |
| Alignm length: | 431 |
| Alignm identity: | 291 |
| Alignm E-value: | 8.40779e-45 |
| Alignm gaps (pig, cow): | 47, 72 |
| Conread position: | 3-485 |
| Cow position: | chr20:10853311-10853782 (view UCSC Genome Browser custom track) |
| Alignm length: | 488 |
| Alignm identity: | 340 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 47, 34 |
| Conread position: | 4-309 |
| Cow position: | chr20:38707357-38707049 (view UCSC Genome Browser custom track) |
| Alignm length: | 310 |
| Alignm identity: | 212 |
| Alignm E-value: | 2e-40 |
| Alignm gaps (pig, cow): | 22, 203 |
| Conread position: | 4-311 |
| Cow position: | chr20:32350296-32349988 (view UCSC Genome Browser custom track) |
| Alignm length: | 316 |
| Alignm identity: | 225 |
| Alignm E-value: | 2.00386e-43 |
| Alignm gaps (pig, cow): | 27, 142 |
| Conread position: | 4-381 |
| Cow position: | chr20:27339194-27338828 (view UCSC Genome Browser custom track) |
| Alignm length: | 383 |
| Alignm identity: | 271 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 44, 165 |
| Conread position: | 4-409 |
| Cow position: | chr20:32121375-32120968 (view UCSC Genome Browser custom track) |
| Alignm length: | 428 |
| Alignm identity: | 288 |
| Alignm E-value: | 6e-32 |
| Alignm gaps (pig, cow): | 26, 59 |
| Conread position: | 4-432 |
| Cow position: | chr20:16177698-16178129 (view UCSC Genome Browser custom track) |
| Alignm length: | 438 |
| Alignm identity: | 305 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 42, 192 |
| Conread position: | 4-435 |
| Cow position: | chr20:8365677-8366110 (view UCSC Genome Browser custom track) |
| Alignm length: | 444 |
| Alignm identity: | 304 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 46, 36 |
| Conread position: | 4-470 |
| Cow position: | chr20:30687628-30687170 (view UCSC Genome Browser custom track) |
| Alignm length: | 474 |
| Alignm identity: | 331 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 42, 136 |
| Conread position: | 4-480 |
| Cow position: | chr20:23800936-23800456 (view UCSC Genome Browser custom track) |
| Alignm length: | 487 |
| Alignm identity: | 342 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 42, 212 |
| Conread position: | 4-484 |
| Cow position: | chr20:28162866-28162394 (view UCSC Genome Browser custom track) |
| Alignm length: | 490 |
| Alignm identity: | 340 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 42, 136 |
| Conread position: | 4-485 |
| Cow position: | chr20:13764944-13764463 (view UCSC Genome Browser custom track) |
| Alignm length: | 494 |
| Alignm identity: | 357 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 42, 18 |
| Conread position: | 4-485 |
| Cow position: | chr20:17659692-17660177 (view UCSC Genome Browser custom track) |
| Alignm length: | 491 |
| Alignm identity: | 349 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 42, 271 |
| Conread position: | 4-485 |
| Cow position: | chr20:21916685-21916205 (view UCSC Genome Browser custom track) |
| Alignm length: | 489 |
| Alignm identity: | 355 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 226, 64 |
| Conread position: | 4-485 |
| Cow position: | chr20:23467617-23468098 (view UCSC Genome Browser custom track) |
| Alignm length: | 491 |
| Alignm identity: | 356 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 42, 269 |
| Conread position: | 4-485 |
| Cow position: | chr20:25848765-25849261 (view UCSC Genome Browser custom track) |
| Alignm length: | 507 |
| Alignm identity: | 366 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 42, 226 |
| Conread position: | 4-485 |
| Cow position: | chr20:28563528-28564012 (view UCSC Genome Browser custom track) |
| Alignm length: | 491 |
| Alignm identity: | 346 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 226, 43 |
| Conread position: | 4-485 |
| Cow position: | chr20:29950574-29950093 (view UCSC Genome Browser custom track) |
| Alignm length: | 493 |
| Alignm identity: | 358 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 42, 69 |
| Conread position: | 4-485 |
| Cow position: | chr20:37582215-37581736 (view UCSC Genome Browser custom track) |
| Alignm length: | 490 |
| Alignm identity: | 349 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 46, 90 |
| Conread position: | 4-490 |
| Cow position: | chr20:824829-824331 (view UCSC Genome Browser custom track) |
| Alignm length: | 511 |
| Alignm identity: | 360 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 43, 220 |
| Conread position: | 4-490 |
| Cow position: | chr20:19439965-19439480 (view UCSC Genome Browser custom track) |
| Alignm length: | 498 |
| Alignm identity: | 357 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 43, 96 |
| Conread position: | 4-490 |
| Cow position: | chr20:26053640-26054126 (view UCSC Genome Browser custom track) |
| Alignm length: | 499 |
| Alignm identity: | 367 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 43, 209 |
| Conread position: | 4-493 |
| Cow position: | chr20:25899739-25899246 (view UCSC Genome Browser custom track) |
| Alignm length: | 505 |
| Alignm identity: | 378 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 43, 209 |
| Conread position: | 5-489 |
| Cow position: | chr20:20752775-20753249 (view UCSC Genome Browser custom track) |
| Alignm length: | 492 |
| Alignm identity: | 317 |
| Alignm E-value: | 1e-39 |
| Alignm gaps (pig, cow): | 42, 66 |
| Conread position: | 6-296 |
| Cow position: | chr20:31497352-31497646 (view UCSC Genome Browser custom track) |
| Alignm length: | 296 |
| Alignm identity: | 211 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 44, 6 |
| Conread position: | 6-407 |
| Cow position: | chr20:22696974-22697372 (view UCSC Genome Browser custom track) |
| Alignm length: | 406 |
| Alignm identity: | 286 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 44, 81 |
| Conread position: | 11-381 |
| Cow position: | chr20:18322912-18323278 (view UCSC Genome Browser custom track) |
| Alignm length: | 382 |
| Alignm identity: | 278 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 31, 98 |
| Conread position: | 11-485 |
| Cow position: | chr20:41363601-41364079 (view UCSC Genome Browser custom track) |
| Alignm length: | 489 |
| Alignm identity: | 339 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 36, 188 |
| Conread position: | 11-498 |
| Cow position: | chr20:30430313-30429828 (view UCSC Genome Browser custom track) |
| Alignm length: | 498 |
| Alignm identity: | 353 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 116, 21 |
| Conread position: | 12-463 |
| Cow position: | chr20:18968523-18968068 (view UCSC Genome Browser custom track) |
| Alignm length: | 464 |
| Alignm identity: | 325 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 34, 214 |
| Conread position: | 12-485 |
| Cow position: | chr20:925378-925844 (view UCSC Genome Browser custom track) |
| Alignm length: | 484 |
| Alignm identity: | 324 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 34, 113 |
| Conread position: | 12-490 |
| Cow position: | chr20:20440908-20441387 (view UCSC Genome Browser custom track) |
| Alignm length: | 491 |
| Alignm identity: | 356 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 35, 201 |
| Conread position: | 13-441 |
| Cow position: | chr20:3306907-3306499 (view UCSC Genome Browser custom track) |
| Alignm length: | 440 |
| Alignm identity: | 291 |
| Alignm E-value: | 6e-31 |
| Alignm gaps (pig, cow): | 37, 86 |
| Conread position: | 15-434 |
| Cow position: | chr20:5792315-5791900 (view UCSC Genome Browser custom track) |
| Alignm length: | 430 |
| Alignm identity: | 291 |
| Alignm E-value: | 2.8026e-45 |
| Alignm gaps (pig, cow): | 34, 79 |
| Conread position: | 30-485 |
| Cow position: | chr20:13677823-13678275 (view UCSC Genome Browser custom track) |
| Alignm length: | 463 |
| Alignm identity: | 319 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 17, 167 |
| Conread position: | 45-485 |
| Cow position: | chr20:9547655-9547215 (view UCSC Genome Browser custom track) |
| Alignm length: | 452 |
| Alignm identity: | 333 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 65, 82 |
| Conread position: | 54-366 |
| Cow position: | chr20:35106961-35106657 (view UCSC Genome Browser custom track) |
| Alignm length: | 314 |
| Alignm identity: | 218 |
| Alignm E-value: | 1.99993e-41 |
| Alignm gaps (pig, cow): | 282, 36 |
| Conread position: | 55-485 |
| Cow position: | chr20:24614908-24615337 (view UCSC Genome Browser custom track) |
| Alignm length: | 444 |
| Alignm identity: | 316 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 78, 74 |
| Conread position: | 69-378 |
| Cow position: | chr20:28304966-28304674 (view UCSC Genome Browser custom track) |
| Alignm length: | 312 |
| Alignm identity: | 203 |
| Alignm E-value: | 6e-21 |
| Alignm gaps (pig, cow): | 22, 66 |
| Conread position: | 75-471 |
| Cow position: | chr20:19214944-19214561 (view UCSC Genome Browser custom track) |
| Alignm length: | 400 |
| Alignm identity: | 262 |
| Alignm E-value: | 9e-35 |
| Alignm gaps (pig, cow): | 280, 41 |
| Conread position: | 93-505 |
| Cow position: | chr20:5195141-5195544 (view UCSC Genome Browser custom track) |
| Alignm length: | 420 |
| Alignm identity: | 270 |
| Alignm E-value: | 1e-28 |
| Alignm gaps (pig, cow): | 128, 34 |
| Conread position: | 202-483 |
| Cow position: | chr20:5466862-5466578 (view UCSC Genome Browser custom track) |
| Alignm length: | 292 |
| Alignm identity: | 198 |
| Alignm E-value: | 1e-25 |
| Alignm gaps (pig, cow): | 18, 72 |
| Conread position: | 239-441 |
| Cow position: | chr20:9344758-9344560 (view UCSC Genome Browser custom track) |
| Alignm length: | 206 |
| Alignm identity: | 145 |
| Alignm E-value: | 2e-23 |
| Alignm gaps (pig, cow): | 25, 31 |
| Conread position: | 244-490 |
| Cow position: | chr20:21718241-21717990 (view UCSC Genome Browser custom track) |
| Alignm length: | 257 |
| Alignm identity: | 182 |
| Alignm E-value: | 4e-28 |
| Alignm gaps (pig, cow): | 20, 26 |
| Conread position: | 247-497 |
| Cow position: | chr20:7572748-7573012 (view UCSC Genome Browser custom track) |
| Alignm length: | 268 |
| Alignm identity: | 189 |
| Alignm E-value: | 2e-31 |
| Alignm gaps (pig, cow): | 60, 214 |
| Conread position: | 288-485 |
| Cow position: | chr20:13499869-13499675 (view UCSC Genome Browser custom track) |
| Alignm length: | 201 |
| Alignm identity: | 157 |
| Alignm E-value: | 4e-37 |
| Alignm gaps (pig, cow): | 74, 9 |
| Conread position: | 289-502 |
| Cow position: | chr20:21395677-21395462 (view UCSC Genome Browser custom track) |
| Alignm length: | 220 |
| Alignm identity: | 152 |
| Alignm E-value: | 7e-23 |
| Alignm gaps (pig, cow): | 17, 159 |
| Conread position: | 307-476 |
| Cow position: | chr20:32349947-32349781 (view UCSC Genome Browser custom track) |
| Alignm length: | 173 |
| Alignm identity: | 129 |
| Alignm E-value: | 8e-24 |
| Alignm gaps (pig, cow): | 48, 10 |
Show alignments to all cow chromosomes.