Cow genome map
| Conread name: | Pig3-SRG8027B03 |
| Conread position: | 1-375 |
| Cow position: | chr23:1339812-1340189 (view UCSC Genome Browser custom track) |
| Alignm length: | 386 |
| Alignm identity: | 279 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 45, 11 |
| Conread position: | 1-485 |
| Cow position: | chr23:2759892-2759403 (view UCSC Genome Browser custom track) |
| Alignm length: | 497 |
| Alignm identity: | 362 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 8, 276 |
| Conread position: | 1-485 |
| Cow position: | chr23:15217909-15218383 (view UCSC Genome Browser custom track) |
| Alignm length: | 496 |
| Alignm identity: | 347 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 8, 122 |
| Conread position: | 1-485 |
| Cow position: | chr23:15527573-15527082 (view UCSC Genome Browser custom track) |
| Alignm length: | 497 |
| Alignm identity: | 366 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 8, 275 |
| Conread position: | 1-485 |
| Cow position: | chr23:16055767-16055278 (view UCSC Genome Browser custom track) |
| Alignm length: | 502 |
| Alignm identity: | 364 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 11, 186 |
| Conread position: | 1-502 |
| Cow position: | chr23:2793277-2793775 (view UCSC Genome Browser custom track) |
| Alignm length: | 512 |
| Alignm identity: | 352 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 15, 279 |
| Conread position: | 2-310 |
| Cow position: | chr23:617490-617798 (view UCSC Genome Browser custom track) |
| Alignm length: | 312 |
| Alignm identity: | 228 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 10, 26 |
| Conread position: | 2-490 |
| Cow position: | chr23:16497264-16497743 (view UCSC Genome Browser custom track) |
| Alignm length: | 495 |
| Alignm identity: | 336 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 10, 126 |
| Conread position: | 3-485 |
| Cow position: | chr23:31648061-31648527 (view UCSC Genome Browser custom track) |
| Alignm length: | 491 |
| Alignm identity: | 337 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 45, 80 |
| Conread position: | 4-298 |
| Cow position: | chr23:10874611-10874913 (view UCSC Genome Browser custom track) |
| Alignm length: | 307 |
| Alignm identity: | 232 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 43, 213 |
| Conread position: | 4-310 |
| Cow position: | chr23:7357225-7356915 (view UCSC Genome Browser custom track) |
| Alignm length: | 314 |
| Alignm identity: | 237 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 46, 201 |
| Conread position: | 4-310 |
| Cow position: | chr23:25676973-25677278 (view UCSC Genome Browser custom track) |
| Alignm length: | 317 |
| Alignm identity: | 227 |
| Alignm E-value: | 1.99993e-41 |
| Alignm gaps (pig, cow): | 43, 95 |
| Conread position: | 4-316 |
| Cow position: | chr23:2319190-2319498 (view UCSC Genome Browser custom track) |
| Alignm length: | 315 |
| Alignm identity: | 218 |
| Alignm E-value: | 6.00036e-42 |
| Alignm gaps (pig, cow): | 43, 123 |
| Conread position: | 4-325 |
| Cow position: | chr23:11978178-11977855 (view UCSC Genome Browser custom track) |
| Alignm length: | 334 |
| Alignm identity: | 238 |
| Alignm E-value: | 1.99965e-42 |
| Alignm gaps (pig, cow): | 37, 94 |
| Conread position: | 4-375 |
| Cow position: | chr23:38579655-38579290 (view UCSC Genome Browser custom track) |
| Alignm length: | 380 |
| Alignm identity: | 269 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 42, 120 |
| Conread position: | 4-441 |
| Cow position: | chr23:13513063-13512632 (view UCSC Genome Browser custom track) |
| Alignm length: | 449 |
| Alignm identity: | 308 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 54, 178 |
| Conread position: | 4-484 |
| Cow position: | chr23:5872582-5873066 (view UCSC Genome Browser custom track) |
| Alignm length: | 494 |
| Alignm identity: | 356 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 42, 211 |
| Conread position: | 4-485 |
| Cow position: | chr23:1021971-1022455 (view UCSC Genome Browser custom track) |
| Alignm length: | 496 |
| Alignm identity: | 329 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 43, 80 |
| Conread position: | 4-485 |
| Cow position: | chr23:4890674-4890191 (view UCSC Genome Browser custom track) |
| Alignm length: | 494 |
| Alignm identity: | 346 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 42, 316 |
| Conread position: | 4-485 |
| Cow position: | chr23:14960967-14961447 (view UCSC Genome Browser custom track) |
| Alignm length: | 492 |
| Alignm identity: | 349 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 42, 94 |
| Conread position: | 4-485 |
| Cow position: | chr23:28304903-28304420 (view UCSC Genome Browser custom track) |
| Alignm length: | 491 |
| Alignm identity: | 353 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 42, 270 |
| Conread position: | 4-485 |
| Cow position: | chr23:36029401-36029875 (view UCSC Genome Browser custom track) |
| Alignm length: | 491 |
| Alignm identity: | 356 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 42, 122 |
| Conread position: | 4-488 |
| Cow position: | chr23:3708392-3707904 (view UCSC Genome Browser custom track) |
| Alignm length: | 497 |
| Alignm identity: | 351 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 44, 28 |
| Conread position: | 4-488 |
| Cow position: | chr23:23283514-23283027 (view UCSC Genome Browser custom track) |
| Alignm length: | 501 |
| Alignm identity: | 344 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 46, 24 |
| Conread position: | 4-490 |
| Cow position: | chr23:608700-608216 (view UCSC Genome Browser custom track) |
| Alignm length: | 495 |
| Alignm identity: | 364 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 45, 270 |
| Conread position: | 4-490 |
| Cow position: | chr23:964514-964994 (view UCSC Genome Browser custom track) |
| Alignm length: | 494 |
| Alignm identity: | 355 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 42, 232 |
| Conread position: | 4-490 |
| Cow position: | chr23:7314899-7314411 (view UCSC Genome Browser custom track) |
| Alignm length: | 501 |
| Alignm identity: | 373 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 43, 210 |
| Conread position: | 4-490 |
| Cow position: | chr23:11713878-11714365 (view UCSC Genome Browser custom track) |
| Alignm length: | 499 |
| Alignm identity: | 367 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 43, 201 |
| Conread position: | 4-490 |
| Cow position: | chr23:22145318-22145805 (view UCSC Genome Browser custom track) |
| Alignm length: | 494 |
| Alignm identity: | 346 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 43, 306 |
| Conread position: | 4-493 |
| Cow position: | chr23:19491538-19491046 (view UCSC Genome Browser custom track) |
| Alignm length: | 504 |
| Alignm identity: | 366 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 42, 208 |
| Conread position: | 4-496 |
| Cow position: | chr23:20154234-20154735 (view UCSC Genome Browser custom track) |
| Alignm length: | 512 |
| Alignm identity: | 365 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 42, 214 |
| Conread position: | 4-502 |
| Cow position: | chr23:2439310-2439799 (view UCSC Genome Browser custom track) |
| Alignm length: | 511 |
| Alignm identity: | 340 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 46, 103 |
| Conread position: | 4-502 |
| Cow position: | chr23:28219422-28218908 (view UCSC Genome Browser custom track) |
| Alignm length: | 522 |
| Alignm identity: | 379 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 43, 187 |
| Conread position: | 4-502 |
| Cow position: | chr23:30238257-30237767 (view UCSC Genome Browser custom track) |
| Alignm length: | 514 |
| Alignm identity: | 370 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 43, 147 |
| Conread position: | 7-485 |
| Cow position: | chr23:18126257-18126747 (view UCSC Genome Browser custom track) |
| Alignm length: | 501 |
| Alignm identity: | 333 |
| Alignm E-value: | 8.40779e-45 |
| Alignm gaps (pig, cow): | 42, 80 |
| Conread position: | 11-417 |
| Cow position: | chr23:2577608-2577198 (view UCSC Genome Browser custom track) |
| Alignm length: | 418 |
| Alignm identity: | 303 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 11, 138 |
| Conread position: | 11-434 |
| Cow position: | chr23:21821345-21821766 (view UCSC Genome Browser custom track) |
| Alignm length: | 432 |
| Alignm identity: | 302 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 40, 196 |
| Conread position: | 12-505 |
| Cow position: | chr23:14971981-14972476 (view UCSC Genome Browser custom track) |
| Alignm length: | 510 |
| Alignm identity: | 361 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 226, 35 |
| Conread position: | 15-496 |
| Cow position: | chr23:22941994-22942477 (view UCSC Genome Browser custom track) |
| Alignm length: | 502 |
| Alignm identity: | 340 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 34, 167 |
| Conread position: | 24-496 |
| Cow position: | chr23:29479172-29478709 (view UCSC Genome Browser custom track) |
| Alignm length: | 481 |
| Alignm identity: | 330 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 23, 47 |
| Conread position: | 26-328 |
| Cow position: | chr23:3316282-3316573 (view UCSC Genome Browser custom track) |
| Alignm length: | 305 |
| Alignm identity: | 209 |
| Alignm E-value: | 2e-32 |
| Alignm gaps (pig, cow): | 20, 100 |
| Conread position: | 26-490 |
| Cow position: | chr23:32350796-32351261 (view UCSC Genome Browser custom track) |
| Alignm length: | 478 |
| Alignm identity: | 353 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 21, 187 |
| Conread position: | 28-312 |
| Cow position: | chr23:11840074-11839795 (view UCSC Genome Browser custom track) |
| Alignm length: | 291 |
| Alignm identity: | 197 |
| Alignm E-value: | 4e-28 |
| Alignm gaps (pig, cow): | 16, 72 |
| Conread position: | 40-485 |
| Cow position: | chr23:17877798-17878256 (view UCSC Genome Browser custom track) |
| Alignm length: | 464 |
| Alignm identity: | 312 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 10, 38 |
| Conread position: | 48-426 |
| Cow position: | chr23:15040628-15041011 (view UCSC Genome Browser custom track) |
| Alignm length: | 389 |
| Alignm identity: | 265 |
| Alignm E-value: | 1.4013e-45 |
| Alignm gaps (pig, cow): | 85, 182 |
| Conread position: | 48-494 |
| Cow position: | chr23:35274577-35274140 (view UCSC Genome Browser custom track) |
| Alignm length: | 454 |
| Alignm identity: | 301 |
| Alignm E-value: | 7.00649e-44 |
| Alignm gaps (pig, cow): | 186, 34 |
| Conread position: | 64-370 |
| Cow position: | chr23:6221210-6220900 (view UCSC Genome Browser custom track) |
| Alignm length: | 315 |
| Alignm identity: | 241 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 161, 75 |
| Conread position: | 109-432 |
| Cow position: | chr23:26158569-26158885 (view UCSC Genome Browser custom track) |
| Alignm length: | 332 |
| Alignm identity: | 223 |
| Alignm E-value: | 4e-28 |
| Alignm gaps (pig, cow): | 197, 17 |
| Conread position: | 114-449 |
| Cow position: | chr23:11074609-11074940 (view UCSC Genome Browser custom track) |
| Alignm length: | 341 |
| Alignm identity: | 261 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 15, 91 |
| Conread position: | 114-490 |
| Cow position: | chr23:41141350-41141726 (view UCSC Genome Browser custom track) |
| Alignm length: | 385 |
| Alignm identity: | 269 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 107, 159 |
| Conread position: | 134-368 |
| Cow position: | chr23:4755581-4755351 (view UCSC Genome Browser custom track) |
| Alignm length: | 241 |
| Alignm identity: | 167 |
| Alignm E-value: | 6e-22 |
| Alignm gaps (pig, cow): | 97, 70 |
| Conread position: | 163-486 |
| Cow position: | chr23:14556637-14556311 (view UCSC Genome Browser custom track) |
| Alignm length: | 333 |
| Alignm identity: | 219 |
| Alignm E-value: | 1e-28 |
| Alignm gaps (pig, cow): | 55, 11 |
| Conread position: | 172-485 |
| Cow position: | chr23:26838646-26838322 (view UCSC Genome Browser custom track) |
| Alignm length: | 334 |
| Alignm identity: | 244 |
| Alignm E-value: | 8.40779e-45 |
| Alignm gaps (pig, cow): | 68, 32 |
| Conread position: | 208-490 |
| Cow position: | chr23:23172562-23172279 (view UCSC Genome Browser custom track) |
| Alignm length: | 295 |
| Alignm identity: | 207 |
| Alignm E-value: | 5e-30 |
| Alignm gaps (pig, cow): | 33, 68 |
Show alignments to all cow chromosomes.