Cow genome map
| Conread name: | Pig3-SRG8027B03 |
| Conread position: | 1-454 |
| Cow position: | chr24:42583684-42584147 (view UCSC Genome Browser custom track) |
| Alignm length: | 470 |
| Alignm identity: | 325 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 11, 26 |
| Conread position: | 1-502 |
| Cow position: | chr24:19703579-19703067 (view UCSC Genome Browser custom track) |
| Alignm length: | 525 |
| Alignm identity: | 376 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 11, 202 |
| Conread position: | 4-296 |
| Cow position: | chr24:37319606-37319882 (view UCSC Genome Browser custom track) |
| Alignm length: | 300 |
| Alignm identity: | 211 |
| Alignm E-value: | 5e-29 |
| Alignm gaps (pig, cow): | 101, 21 |
| Conread position: | 4-310 |
| Cow position: | chr24:5991087-5991396 (view UCSC Genome Browser custom track) |
| Alignm length: | 312 |
| Alignm identity: | 230 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 43, 150 |
| Conread position: | 4-351 |
| Cow position: | chr24:40550700-40550351 (view UCSC Genome Browser custom track) |
| Alignm length: | 356 |
| Alignm identity: | 268 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 43, 209 |
| Conread position: | 4-375 |
| Cow position: | chr24:9073246-9073623 (view UCSC Genome Browser custom track) |
| Alignm length: | 382 |
| Alignm identity: | 260 |
| Alignm E-value: | 8.40779e-45 |
| Alignm gaps (pig, cow): | 43, 25 |
| Conread position: | 4-395 |
| Cow position: | chr24:23096692-23097081 (view UCSC Genome Browser custom track) |
| Alignm length: | 402 |
| Alignm identity: | 293 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 42, 126 |
| Conread position: | 4-399 |
| Cow position: | chr24:208930-209330 (view UCSC Genome Browser custom track) |
| Alignm length: | 407 |
| Alignm identity: | 295 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 43, 78 |
| Conread position: | 4-405 |
| Cow position: | chr24:19184242-19183836 (view UCSC Genome Browser custom track) |
| Alignm length: | 408 |
| Alignm identity: | 303 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 52, 312 |
| Conread position: | 4-432 |
| Cow position: | chr24:23093954-23094379 (view UCSC Genome Browser custom track) |
| Alignm length: | 438 |
| Alignm identity: | 318 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 42, 28 |
| Conread position: | 4-432 |
| Cow position: | chr24:39679399-39678956 (view UCSC Genome Browser custom track) |
| Alignm length: | 448 |
| Alignm identity: | 315 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 43, 33 |
| Conread position: | 4-444 |
| Cow position: | chr24:36557492-36557929 (view UCSC Genome Browser custom track) |
| Alignm length: | 449 |
| Alignm identity: | 308 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 44, 271 |
| Conread position: | 4-450 |
| Cow position: | chr24:17299835-17300278 (view UCSC Genome Browser custom track) |
| Alignm length: | 455 |
| Alignm identity: | 318 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 45, 125 |
| Conread position: | 4-472 |
| Cow position: | chr24:6667693-6668151 (view UCSC Genome Browser custom track) |
| Alignm length: | 476 |
| Alignm identity: | 331 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 46, 85 |
| Conread position: | 4-473 |
| Cow position: | chr24:37214935-37215404 (view UCSC Genome Browser custom track) |
| Alignm length: | 479 |
| Alignm identity: | 312 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 43, 231 |
| Conread position: | 4-475 |
| Cow position: | chr24:19468532-19469003 (view UCSC Genome Browser custom track) |
| Alignm length: | 481 |
| Alignm identity: | 346 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 43, 123 |
| Conread position: | 4-476 |
| Cow position: | chr24:36299483-36299010 (view UCSC Genome Browser custom track) |
| Alignm length: | 485 |
| Alignm identity: | 363 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 44, 102 |
| Conread position: | 4-483 |
| Cow position: | chr24:38639621-38639119 (view UCSC Genome Browser custom track) |
| Alignm length: | 515 |
| Alignm identity: | 344 |
| Alignm E-value: | 5e-40 |
| Alignm gaps (pig, cow): | 46, 130 |
| Conread position: | 4-484 |
| Cow position: | chr24:38585058-38585539 (view UCSC Genome Browser custom track) |
| Alignm length: | 489 |
| Alignm identity: | 347 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 46, 306 |
| Conread position: | 4-485 |
| Cow position: | chr24:146532-147017 (view UCSC Genome Browser custom track) |
| Alignm length: | 491 |
| Alignm identity: | 350 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 42, 270 |
| Conread position: | 4-485 |
| Cow position: | chr24:5776335-5776807 (view UCSC Genome Browser custom track) |
| Alignm length: | 493 |
| Alignm identity: | 324 |
| Alignm E-value: | 6.00036e-42 |
| Alignm gaps (pig, cow): | 237, 28 |
| Conread position: | 4-485 |
| Cow position: | chr24:12127017-12127516 (view UCSC Genome Browser custom track) |
| Alignm length: | 510 |
| Alignm identity: | 334 |
| Alignm E-value: | 4e-38 |
| Alignm gaps (pig, cow): | 70, 215 |
| Conread position: | 4-485 |
| Cow position: | chr24:17410525-17410050 (view UCSC Genome Browser custom track) |
| Alignm length: | 493 |
| Alignm identity: | 339 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 47, 162 |
| Conread position: | 4-485 |
| Cow position: | chr24:19835478-19835001 (view UCSC Genome Browser custom track) |
| Alignm length: | 490 |
| Alignm identity: | 352 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 46, 116 |
| Conread position: | 4-485 |
| Cow position: | chr24:22973142-22972659 (view UCSC Genome Browser custom track) |
| Alignm length: | 491 |
| Alignm identity: | 349 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 42, 270 |
| Conread position: | 4-485 |
| Cow position: | chr24:33935465-33934982 (view UCSC Genome Browser custom track) |
| Alignm length: | 490 |
| Alignm identity: | 343 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 43, 312 |
| Conread position: | 4-490 |
| Cow position: | chr24:12149212-12149704 (view UCSC Genome Browser custom track) |
| Alignm length: | 506 |
| Alignm identity: | 368 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 35, 28 |
| Conread position: | 4-490 |
| Cow position: | chr24:13043551-13044037 (view UCSC Genome Browser custom track) |
| Alignm length: | 499 |
| Alignm identity: | 368 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 43, 177 |
| Conread position: | 4-490 |
| Cow position: | chr24:13190243-13189763 (view UCSC Genome Browser custom track) |
| Alignm length: | 498 |
| Alignm identity: | 344 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 35, 148 |
| Conread position: | 4-491 |
| Cow position: | chr24:6962674-6963161 (view UCSC Genome Browser custom track) |
| Alignm length: | 497 |
| Alignm identity: | 362 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 43, 8 |
| Conread position: | 4-500 |
| Cow position: | chr24:14870248-14870755 (view UCSC Genome Browser custom track) |
| Alignm length: | 515 |
| Alignm identity: | 378 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 42, 156 |
| Conread position: | 4-502 |
| Cow position: | chr24:12333651-12334158 (view UCSC Genome Browser custom track) |
| Alignm length: | 522 |
| Alignm identity: | 354 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 42, 275 |
| Conread position: | 4-502 |
| Cow position: | chr24:17322752-17322264 (view UCSC Genome Browser custom track) |
| Alignm length: | 514 |
| Alignm identity: | 368 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 43, 8 |
| Conread position: | 4-502 |
| Cow position: | chr24:29189366-29188859 (view UCSC Genome Browser custom track) |
| Alignm length: | 518 |
| Alignm identity: | 383 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 42, 201 |
| Conread position: | 6-302 |
| Cow position: | chr24:17031971-17032257 (view UCSC Genome Browser custom track) |
| Alignm length: | 302 |
| Alignm identity: | 217 |
| Alignm E-value: | 2e-39 |
| Alignm gaps (pig, cow): | 44, 6 |
| Conread position: | 6-484 |
| Cow position: | chr24:12204286-12204748 (view UCSC Genome Browser custom track) |
| Alignm length: | 491 |
| Alignm identity: | 318 |
| Alignm E-value: | 2e-29 |
| Alignm gaps (pig, cow): | 41, 6 |
| Conread position: | 6-496 |
| Cow position: | chr24:6130870-6130391 (view UCSC Genome Browser custom track) |
| Alignm length: | 500 |
| Alignm identity: | 344 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 96, 6 |
| Conread position: | 11-381 |
| Cow position: | chr24:11151058-11151428 (view UCSC Genome Browser custom track) |
| Alignm length: | 380 |
| Alignm identity: | 284 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 36, 162 |
| Conread position: | 11-400 |
| Cow position: | chr24:16082429-16082823 (view UCSC Genome Browser custom track) |
| Alignm length: | 402 |
| Alignm identity: | 293 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 36, 193 |
| Conread position: | 11-480 |
| Cow position: | chr24:40469305-40469769 (view UCSC Genome Browser custom track) |
| Alignm length: | 476 |
| Alignm identity: | 327 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 39, 171 |
| Conread position: | 11-500 |
| Cow position: | chr24:35868545-35869004 (view UCSC Genome Browser custom track) |
| Alignm length: | 500 |
| Alignm identity: | 335 |
| Alignm E-value: | 1e-37 |
| Alignm gaps (pig, cow): | 220, 38 |
| Conread position: | 12-489 |
| Cow position: | chr24:6338452-6337973 (view UCSC Genome Browser custom track) |
| Alignm length: | 489 |
| Alignm identity: | 344 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 38, 203 |
| Conread position: | 12-490 |
| Cow position: | chr24:7063607-7063133 (view UCSC Genome Browser custom track) |
| Alignm length: | 492 |
| Alignm identity: | 365 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 35, 108 |
| Conread position: | 12-496 |
| Cow position: | chr24:14382551-14383047 (view UCSC Genome Browser custom track) |
| Alignm length: | 506 |
| Alignm identity: | 354 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 38, 271 |
| Conread position: | 12-501 |
| Cow position: | chr24:9089992-9090478 (view UCSC Genome Browser custom track) |
| Alignm length: | 499 |
| Alignm identity: | 349 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 35, 108 |
| Conread position: | 12-505 |
| Cow position: | chr24:13234317-13233828 (view UCSC Genome Browser custom track) |
| Alignm length: | 503 |
| Alignm identity: | 353 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 35, 262 |
| Conread position: | 17-427 |
| Cow position: | chr24:24074231-24074626 (view UCSC Genome Browser custom track) |
| Alignm length: | 414 |
| Alignm identity: | 266 |
| Alignm E-value: | 2e-33 |
| Alignm gaps (pig, cow): | 30, 124 |
| Conread position: | 18-485 |
| Cow position: | chr24:12088264-12087794 (view UCSC Genome Browser custom track) |
| Alignm length: | 480 |
| Alignm identity: | 340 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 34, 188 |
| Conread position: | 28-507 |
| Cow position: | chr24:38726305-38726772 (view UCSC Genome Browser custom track) |
| Alignm length: | 488 |
| Alignm identity: | 314 |
| Alignm E-value: | 3e-34 |
| Alignm gaps (pig, cow): | 18, 41 |
| Conread position: | 38-490 |
| Cow position: | chr24:23503817-23504269 (view UCSC Genome Browser custom track) |
| Alignm length: | 462 |
| Alignm identity: | 340 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 183, 234 |
| Conread position: | 53-414 |
| Cow position: | chr24:2724103-2723746 (view UCSC Genome Browser custom track) |
| Alignm length: | 375 |
| Alignm identity: | 251 |
| Alignm E-value: | 5e-29 |
| Alignm gaps (pig, cow): | 182, 73 |
| Conread position: | 58-503 |
| Cow position: | chr24:17957509-17957975 (view UCSC Genome Browser custom track) |
| Alignm length: | 470 |
| Alignm identity: | 343 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 178, 407 |
| Conread position: | 59-505 |
| Cow position: | chr24:5887239-5887680 (view UCSC Genome Browser custom track) |
| Alignm length: | 455 |
| Alignm identity: | 286 |
| Alignm E-value: | 2e-31 |
| Alignm gaps (pig, cow): | 176, 17 |
| Conread position: | 62-414 |
| Cow position: | chr24:5943663-5943320 (view UCSC Genome Browser custom track) |
| Alignm length: | 355 |
| Alignm identity: | 236 |
| Alignm E-value: | 4e-37 |
| Alignm gaps (pig, cow): | 181, 162 |
| Conread position: | 64-310 |
| Cow position: | chr24:19641891-19641638 (view UCSC Genome Browser custom track) |
| Alignm length: | 259 |
| Alignm identity: | 176 |
| Alignm E-value: | 2e-22 |
| Alignm gaps (pig, cow): | 25, 68 |
| Conread position: | 78-375 |
| Cow position: | chr24:9080816-9081118 (view UCSC Genome Browser custom track) |
| Alignm length: | 309 |
| Alignm identity: | 220 |
| Alignm E-value: | 1.99993e-41 |
| Alignm gaps (pig, cow): | 55, 75 |
| Conread position: | 91-468 |
| Cow position: | chr24:40469163-40468781 (view UCSC Genome Browser custom track) |
| Alignm length: | 390 |
| Alignm identity: | 283 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 124, 183 |
| Conread position: | 99-490 |
| Cow position: | chr24:14755980-14755589 (view UCSC Genome Browser custom track) |
| Alignm length: | 399 |
| Alignm identity: | 278 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 121, 216 |
| Conread position: | 101-485 |
| Cow position: | chr24:20285933-20286318 (view UCSC Genome Browser custom track) |
| Alignm length: | 392 |
| Alignm identity: | 275 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 129, 172 |
| Conread position: | 120-432 |
| Cow position: | chr24:25438561-25438247 (view UCSC Genome Browser custom track) |
| Alignm length: | 323 |
| Alignm identity: | 230 |
| Alignm E-value: | 1.99965e-42 |
| Alignm gaps (pig, cow): | 122, 18 |
| Conread position: | 152-441 |
| Cow position: | chr24:12107637-12107930 (view UCSC Genome Browser custom track) |
| Alignm length: | 300 |
| Alignm identity: | 198 |
| Alignm E-value: | 8e-24 |
| Alignm gaps (pig, cow): | 79, 48 |
| Conread position: | 185-480 |
| Cow position: | chr24:37199022-37199314 (view UCSC Genome Browser custom track) |
| Alignm length: | 304 |
| Alignm identity: | 208 |
| Alignm E-value: | 1e-28 |
| Alignm gaps (pig, cow): | 30, 116 |
| Conread position: | 198-440 |
| Cow position: | chr24:35840006-35840258 (view UCSC Genome Browser custom track) |
| Alignm length: | 257 |
| Alignm identity: | 183 |
| Alignm E-value: | 2e-30 |
| Alignm gaps (pig, cow): | 27, 77 |
| Conread position: | 208-484 |
| Cow position: | chr24:29351985-29352256 (view UCSC Genome Browser custom track) |
| Alignm length: | 282 |
| Alignm identity: | 189 |
| Alignm E-value: | 3e-26 |
| Alignm gaps (pig, cow): | 32, 94 |
| Conread position: | 239-485 |
| Cow position: | chr24:9545894-9545649 (view UCSC Genome Browser custom track) |
| Alignm length: | 252 |
| Alignm identity: | 173 |
| Alignm E-value: | 3e-26 |
| Alignm gaps (pig, cow): | 25, 31 |
| Conread position: | 239-490 |
| Cow position: | chr24:6023250-6023497 (view UCSC Genome Browser custom track) |
| Alignm length: | 256 |
| Alignm identity: | 177 |
| Alignm E-value: | 1e-27 |
| Alignm gaps (pig, cow): | 26, 31 |
| Conread position: | 247-505 |
| Cow position: | chr24:6061239-6060987 (view UCSC Genome Browser custom track) |
| Alignm length: | 262 |
| Alignm identity: | 187 |
| Alignm E-value: | 3e-34 |
| Alignm gaps (pig, cow): | 17, 23 |
| Conread position: | 268-502 |
| Cow position: | chr24:6658685-6658912 (view UCSC Genome Browser custom track) |
| Alignm length: | 239 |
| Alignm identity: | 167 |
| Alignm E-value: | 3e-23 |
| Alignm gaps (pig, cow): | 71, 47 |
| Conread position: | 273-480 |
| Cow position: | chr24:6036793-6036588 (view UCSC Genome Browser custom track) |
| Alignm length: | 212 |
| Alignm identity: | 148 |
| Alignm E-value: | 8e-23 |
| Alignm gaps (pig, cow): | 82, 41 |
| Conread position: | 276-490 |
| Cow position: | chr24:44019310-44019099 (view UCSC Genome Browser custom track) |
| Alignm length: | 220 |
| Alignm identity: | 159 |
| Alignm E-value: | 1e-26 |
| Alignm gaps (pig, cow): | 60, 38 |
| Conread position: | 314-490 |
| Cow position: | chr24:310633-310458 (view UCSC Genome Browser custom track) |
| Alignm length: | 181 |
| Alignm identity: | 130 |
| Alignm E-value: | 6e-21 |
| Alignm gaps (pig, cow): | 49, 77 |
Show alignments to all cow chromosomes.