Cow genome map
| Conread name: | Pig3-SRG8027B03 |
| Conread position: | 1-330 |
| Cow position: | chr28:10293503-10293166 (view UCSC Genome Browser custom track) |
| Alignm length: | 340 |
| Alignm identity: | 240 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 46, 277 |
| Conread position: | 1-502 |
| Cow position: | chr28:12152359-12151857 (view UCSC Genome Browser custom track) |
| Alignm length: | 515 |
| Alignm identity: | 367 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 45, 31 |
| Conread position: | 2-485 |
| Cow position: | chr28:21361534-21361047 (view UCSC Genome Browser custom track) |
| Alignm length: | 497 |
| Alignm identity: | 342 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 5, 133 |
| Conread position: | 2-490 |
| Cow position: | chr28:6777901-6778391 (view UCSC Genome Browser custom track) |
| Alignm length: | 503 |
| Alignm identity: | 368 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 10, 212 |
| Conread position: | 2-505 |
| Cow position: | chr28:18099460-18099967 (view UCSC Genome Browser custom track) |
| Alignm length: | 527 |
| Alignm identity: | 360 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 10, 240 |
| Conread position: | 4-310 |
| Cow position: | chr28:8785468-8785168 (view UCSC Genome Browser custom track) |
| Alignm length: | 312 |
| Alignm identity: | 239 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 151, 33 |
| Conread position: | 4-310 |
| Cow position: | chr28:17631136-17630826 (view UCSC Genome Browser custom track) |
| Alignm length: | 315 |
| Alignm identity: | 244 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 43, 209 |
| Conread position: | 4-328 |
| Cow position: | chr28:307804-308131 (view UCSC Genome Browser custom track) |
| Alignm length: | 334 |
| Alignm identity: | 251 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 43, 210 |
| Conread position: | 4-381 |
| Cow position: | chr28:9180897-9180532 (view UCSC Genome Browser custom track) |
| Alignm length: | 387 |
| Alignm identity: | 273 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 43, 8 |
| Conread position: | 4-405 |
| Cow position: | chr28:5568187-5567783 (view UCSC Genome Browser custom track) |
| Alignm length: | 409 |
| Alignm identity: | 293 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 145, 38 |
| Conread position: | 4-428 |
| Cow position: | chr28:28440772-28440349 (view UCSC Genome Browser custom track) |
| Alignm length: | 436 |
| Alignm identity: | 304 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 46, 203 |
| Conread position: | 4-430 |
| Cow position: | chr28:10471682-10471276 (view UCSC Genome Browser custom track) |
| Alignm length: | 433 |
| Alignm identity: | 306 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 42, 95 |
| Conread position: | 4-441 |
| Cow position: | chr28:24884882-24884449 (view UCSC Genome Browser custom track) |
| Alignm length: | 444 |
| Alignm identity: | 320 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 43, 209 |
| Conread position: | 4-452 |
| Cow position: | chr28:21322751-21322308 (view UCSC Genome Browser custom track) |
| Alignm length: | 457 |
| Alignm identity: | 303 |
| Alignm E-value: | 1.96182e-44 |
| Alignm gaps (pig, cow): | 43, 56 |
| Conread position: | 4-469 |
| Cow position: | chr28:34201622-34202083 (view UCSC Genome Browser custom track) |
| Alignm length: | 474 |
| Alignm identity: | 336 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 36, 117 |
| Conread position: | 4-471 |
| Cow position: | chr28:6350862-6350392 (view UCSC Genome Browser custom track) |
| Alignm length: | 481 |
| Alignm identity: | 330 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 48, 11 |
| Conread position: | 4-480 |
| Cow position: | chr28:22259117-22259595 (view UCSC Genome Browser custom track) |
| Alignm length: | 486 |
| Alignm identity: | 345 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 42, 271 |
| Conread position: | 4-483 |
| Cow position: | chr28:8381073-8380593 (view UCSC Genome Browser custom track) |
| Alignm length: | 493 |
| Alignm identity: | 359 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 42, 123 |
| Conread position: | 4-484 |
| Cow position: | chr28:7004033-7003551 (view UCSC Genome Browser custom track) |
| Alignm length: | 491 |
| Alignm identity: | 353 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 42, 136 |
| Conread position: | 4-485 |
| Cow position: | chr28:1165861-1166340 (view UCSC Genome Browser custom track) |
| Alignm length: | 493 |
| Alignm identity: | 355 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 42, 136 |
| Conread position: | 4-485 |
| Cow position: | chr28:1506897-1506420 (view UCSC Genome Browser custom track) |
| Alignm length: | 494 |
| Alignm identity: | 363 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 42, 73 |
| Conread position: | 4-485 |
| Cow position: | chr28:5939518-5939042 (view UCSC Genome Browser custom track) |
| Alignm length: | 489 |
| Alignm identity: | 343 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 42, 156 |
| Conread position: | 4-485 |
| Cow position: | chr28:7027745-7028228 (view UCSC Genome Browser custom track) |
| Alignm length: | 491 |
| Alignm identity: | 335 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 10, 212 |
| Conread position: | 4-485 |
| Cow position: | chr28:12408186-12408671 (view UCSC Genome Browser custom track) |
| Alignm length: | 493 |
| Alignm identity: | 355 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 42, 270 |
| Conread position: | 4-485 |
| Cow position: | chr28:15034074-15034557 (view UCSC Genome Browser custom track) |
| Alignm length: | 492 |
| Alignm identity: | 349 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 42, 136 |
| Conread position: | 4-485 |
| Cow position: | chr28:17390439-17389955 (view UCSC Genome Browser custom track) |
| Alignm length: | 491 |
| Alignm identity: | 354 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 42, 28 |
| Conread position: | 4-485 |
| Cow position: | chr28:33638576-33638098 (view UCSC Genome Browser custom track) |
| Alignm length: | 489 |
| Alignm identity: | 358 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 42, 213 |
| Conread position: | 4-486 |
| Cow position: | chr28:33254346-33253867 (view UCSC Genome Browser custom track) |
| Alignm length: | 500 |
| Alignm identity: | 349 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 42, 74 |
| Conread position: | 4-490 |
| Cow position: | chr28:483557-484044 (view UCSC Genome Browser custom track) |
| Alignm length: | 500 |
| Alignm identity: | 363 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 43, 187 |
| Conread position: | 4-490 |
| Cow position: | chr28:784699-784207 (view UCSC Genome Browser custom track) |
| Alignm length: | 504 |
| Alignm identity: | 373 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 42, 215 |
| Conread position: | 4-490 |
| Cow position: | chr28:1460132-1459645 (view UCSC Genome Browser custom track) |
| Alignm length: | 500 |
| Alignm identity: | 371 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 43, 209 |
| Conread position: | 4-490 |
| Cow position: | chr28:22231255-22231738 (view UCSC Genome Browser custom track) |
| Alignm length: | 495 |
| Alignm identity: | 348 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 46, 201 |
| Conread position: | 4-490 |
| Cow position: | chr28:24590889-24590407 (view UCSC Genome Browser custom track) |
| Alignm length: | 497 |
| Alignm identity: | 353 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 227, 28 |
| Conread position: | 4-498 |
| Cow position: | chr28:8718928-8719416 (view UCSC Genome Browser custom track) |
| Alignm length: | 508 |
| Alignm identity: | 365 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 42, 137 |
| Conread position: | 4-502 |
| Cow position: | chr28:2086498-2085997 (view UCSC Genome Browser custom track) |
| Alignm length: | 513 |
| Alignm identity: | 364 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 42, 136 |
| Conread position: | 4-502 |
| Cow position: | chr28:13461998-13461503 (view UCSC Genome Browser custom track) |
| Alignm length: | 508 |
| Alignm identity: | 355 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 42, 228 |
| Conread position: | 6-485 |
| Cow position: | chr28:24669625-24669152 (view UCSC Genome Browser custom track) |
| Alignm length: | 492 |
| Alignm identity: | 352 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 44, 6 |
| Conread position: | 7-490 |
| Cow position: | chr28:6536772-6537260 (view UCSC Genome Browser custom track) |
| Alignm length: | 500 |
| Alignm identity: | 359 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 40, 9 |
| Conread position: | 11-478 |
| Cow position: | chr28:11504208-11504680 (view UCSC Genome Browser custom track) |
| Alignm length: | 481 |
| Alignm identity: | 345 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 10, 205 |
| Conread position: | 11-490 |
| Cow position: | chr28:1955387-1954905 (view UCSC Genome Browser custom track) |
| Alignm length: | 493 |
| Alignm identity: | 354 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 36, 204 |
| Conread position: | 12-485 |
| Cow position: | chr28:1215812-1216281 (view UCSC Genome Browser custom track) |
| Alignm length: | 479 |
| Alignm identity: | 350 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 34, 118 |
| Conread position: | 14-485 |
| Cow position: | chr28:32304224-32304692 (view UCSC Genome Browser custom track) |
| Alignm length: | 481 |
| Alignm identity: | 344 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 24, 64 |
| Conread position: | 16-470 |
| Cow position: | chr28:24542072-24541635 (view UCSC Genome Browser custom track) |
| Alignm length: | 461 |
| Alignm identity: | 297 |
| Alignm E-value: | 5e-32 |
| Alignm gaps (pig, cow): | 30, 100 |
| Conread position: | 16-485 |
| Cow position: | chr28:7706665-7707139 (view UCSC Genome Browser custom track) |
| Alignm length: | 495 |
| Alignm identity: | 342 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 141, 16 |
| Conread position: | 16-490 |
| Cow position: | chr28:31591582-31591109 (view UCSC Genome Browser custom track) |
| Alignm length: | 487 |
| Alignm identity: | 348 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 33, 157 |
| Conread position: | 21-412 |
| Cow position: | chr28:15999123-15998728 (view UCSC Genome Browser custom track) |
| Alignm length: | 404 |
| Alignm identity: | 301 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 26, 192 |
| Conread position: | 22-485 |
| Cow position: | chr28:1765996-1765536 (view UCSC Genome Browser custom track) |
| Alignm length: | 475 |
| Alignm identity: | 335 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 28, 179 |
| Conread position: | 26-502 |
| Cow position: | chr28:10614995-10615469 (view UCSC Genome Browser custom track) |
| Alignm length: | 491 |
| Alignm identity: | 344 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 204, 55 |
| Conread position: | 28-485 |
| Cow position: | chr28:23024233-23023780 (view UCSC Genome Browser custom track) |
| Alignm length: | 470 |
| Alignm identity: | 331 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 22, 173 |
| Conread position: | 54-295 |
| Cow position: | chr28:14231285-14231529 (view UCSC Genome Browser custom track) |
| Alignm length: | 250 |
| Alignm identity: | 179 |
| Alignm E-value: | 2e-32 |
| Alignm gaps (pig, cow): | 61, 36 |
| Conread position: | 62-426 |
| Cow position: | chr28:25092844-25093198 (view UCSC Genome Browser custom track) |
| Alignm length: | 367 |
| Alignm identity: | 238 |
| Alignm E-value: | 1e-30 |
| Alignm gaps (pig, cow): | 178, 31 |
| Conread position: | 63-336 |
| Cow position: | chr28:13604935-13604659 (view UCSC Genome Browser custom track) |
| Alignm length: | 277 |
| Alignm identity: | 202 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 227, 0 |
| Conread position: | 72-490 |
| Cow position: | chr28:7058700-7059118 (view UCSC Genome Browser custom track) |
| Alignm length: | 431 |
| Alignm identity: | 320 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 159, 140 |
| Conread position: | 79-430 |
| Cow position: | chr28:10067102-10067455 (view UCSC Genome Browser custom track) |
| Alignm length: | 361 |
| Alignm identity: | 242 |
| Alignm E-value: | 8e-36 |
| Alignm gaps (pig, cow): | 160, 50 |
| Conread position: | 90-496 |
| Cow position: | chr28:29821920-29821532 (view UCSC Genome Browser custom track) |
| Alignm length: | 413 |
| Alignm identity: | 286 |
| Alignm E-value: | 1.4013e-45 |
| Alignm gaps (pig, cow): | 264, 98 |
| Conread position: | 99-493 |
| Cow position: | chr28:9288887-9288494 (view UCSC Genome Browser custom track) |
| Alignm length: | 406 |
| Alignm identity: | 289 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 132, 27 |
| Conread position: | 111-502 |
| Cow position: | chr28:15587993-15587604 (view UCSC Genome Browser custom track) |
| Alignm length: | 404 |
| Alignm identity: | 274 |
| Alignm E-value: | 4.00001e-41 |
| Alignm gaps (pig, cow): | 120, 89 |
| Conread position: | 125-485 |
| Cow position: | chr28:34596146-34595786 (view UCSC Genome Browser custom track) |
| Alignm length: | 371 |
| Alignm identity: | 260 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 106, 87 |
| Conread position: | 128-502 |
| Cow position: | chr28:24559512-24559137 (view UCSC Genome Browser custom track) |
| Alignm length: | 385 |
| Alignm identity: | 268 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 113, 84 |
| Conread position: | 134-485 |
| Cow position: | chr28:33958896-33959249 (view UCSC Genome Browser custom track) |
| Alignm length: | 357 |
| Alignm identity: | 217 |
| Alignm E-value: | 5e-21 |
| Alignm gaps (pig, cow): | 85, 195 |
| Conread position: | 140-398 |
| Cow position: | chr28:3018807-3019071 (view UCSC Genome Browser custom track) |
| Alignm length: | 267 |
| Alignm identity: | 187 |
| Alignm E-value: | 6e-34 |
| Alignm gaps (pig, cow): | 99, 90 |
| Conread position: | 144-414 |
| Cow position: | chr28:5815105-5814832 (view UCSC Genome Browser custom track) |
| Alignm length: | 284 |
| Alignm identity: | 195 |
| Alignm E-value: | 7e-25 |
| Alignm gaps (pig, cow): | 13, 55 |
| Conread position: | 154-485 |
| Cow position: | chr28:22457652-22457328 (view UCSC Genome Browser custom track) |
| Alignm length: | 335 |
| Alignm identity: | 218 |
| Alignm E-value: | 3e-28 |
| Alignm gaps (pig, cow): | 209, 75 |
| Conread position: | 163-502 |
| Cow position: | chr28:7827855-7827517 (view UCSC Genome Browser custom track) |
| Alignm length: | 354 |
| Alignm identity: | 244 |
| Alignm E-value: | 6e-33 |
| Alignm gaps (pig, cow): | 78, 49 |
| Conread position: | 247-483 |
| Cow position: | chr28:10645648-10645880 (view UCSC Genome Browser custom track) |
| Alignm length: | 241 |
| Alignm identity: | 172 |
| Alignm E-value: | 4e-29 |
| Alignm gaps (pig, cow): | 14, 22 |
| Conread position: | 248-498 |
| Cow position: | chr28:9295570-9295815 (view UCSC Genome Browser custom track) |
| Alignm length: | 253 |
| Alignm identity: | 190 |
| Alignm E-value: | 6.02558e-44 |
| Alignm gaps (pig, cow): | 182, 46 |
| Conread position: | 307-485 |
| Cow position: | chr28:5803750-5803574 (view UCSC Genome Browser custom track) |
| Alignm length: | 182 |
| Alignm identity: | 137 |
| Alignm E-value: | 1e-28 |
| Alignm gaps (pig, cow): | 55, 85 |
| Conread position: | 314-490 |
| Cow position: | chr28:31850227-31850402 (view UCSC Genome Browser custom track) |
| Alignm length: | 181 |
| Alignm identity: | 138 |
| Alignm E-value: | 1e-29 |
| Alignm gaps (pig, cow): | 48, 35 |
| Conread position: | 331-505 |
| Cow position: | chr28:13604464-13604291 (view UCSC Genome Browser custom track) |
| Alignm length: | 178 |
| Alignm identity: | 129 |
| Alignm E-value: | 6e-23 |
| Alignm gaps (pig, cow): | 99, 67 |
Show alignments to all cow chromosomes.