Cow genome map

Conread name: Pig3-SRG8027B03

Conread position: 1-324
Cow position: chr29:32642232-32641920 (view UCSC Genome Browser custom track)
Alignm length: 330
Alignm identity: 231
Alignm E-value: 4e-37
Alignm gaps (pig, cow): 46, 28

Conread position: 1-485
Cow position: chr29:7429117-7429608 (view UCSC Genome Browser custom track)
Alignm length: 496
Alignm identity: 354
Alignm E-value: 0
Alignm gaps (pig, cow): 8, 42

Conread position: 1-485
Cow position: chr29:34797804-34798293 (view UCSC Genome Browser custom track)
Alignm length: 500
Alignm identity: 357
Alignm E-value: 0
Alignm gaps (pig, cow): 9, 215

Conread position: 1-490
Cow position: chr29:38206659-38207150 (view UCSC Genome Browser custom track)
Alignm length: 504
Alignm identity: 369
Alignm E-value: 0
Alignm gaps (pig, cow): 46, 159

Conread position: 2-441
Cow position: chr29:17407129-17406684 (view UCSC Genome Browser custom track)
Alignm length: 454
Alignm identity: 328
Alignm E-value: 0
Alignm gaps (pig, cow): 10, 213

Conread position: 2-500
Cow position: chr29:647812-647308 (view UCSC Genome Browser custom track)
Alignm length: 519
Alignm identity: 362
Alignm E-value: 0
Alignm gaps (pig, cow): 10, 117

Conread position: 3-485
Cow position: chr29:2692162-2691681 (view UCSC Genome Browser custom track)
Alignm length: 492
Alignm identity: 354
Alignm E-value: 0
Alignm gaps (pig, cow): 43, 23

Conread position: 4-268
Cow position: chr29:14082727-14082992 (view UCSC Genome Browser custom track)
Alignm length: 270
Alignm identity: 203
Alignm E-value: 0
Alignm gaps (pig, cow): 43, 136

Conread position: 4-296
Cow position: chr29:9962426-9962138 (view UCSC Genome Browser custom track)
Alignm length: 298
Alignm identity: 214
Alignm E-value: 2e-40
Alignm gaps (pig, cow): 42, 111

Conread position: 4-304
Cow position: chr29:31122832-31122525 (view UCSC Genome Browser custom track)
Alignm length: 309
Alignm identity: 225
Alignm E-value: 0
Alignm gaps (pig, cow): 43, 273

Conread position: 4-310
Cow position: chr29:18022562-18022260 (view UCSC Genome Browser custom track)
Alignm length: 312
Alignm identity: 217
Alignm E-value: 4e-38
Alignm gaps (pig, cow): 40, 120

Conread position: 4-328
Cow position: chr29:16688831-16688510 (view UCSC Genome Browser custom track)
Alignm length: 333
Alignm identity: 243
Alignm E-value: 0
Alignm gaps (pig, cow): 43, 106

Conread position: 4-366
Cow position: chr29:22951173-22951539 (view UCSC Genome Browser custom track)
Alignm length: 374
Alignm identity: 266
Alignm E-value: 0
Alignm gaps (pig, cow): 19, 210

Conread position: 4-416
Cow position: chr29:13075438-13075037 (view UCSC Genome Browser custom track)
Alignm length: 422
Alignm identity: 285
Alignm E-value: 6.00036e-42
Alignm gaps (pig, cow): 149, 32

Conread position: 4-432
Cow position: chr29:40611876-40612305 (view UCSC Genome Browser custom track)
Alignm length: 434
Alignm identity: 289
Alignm E-value: 0
Alignm gaps (pig, cow): 42, 267

Conread position: 4-434
Cow position: chr29:27032429-27032002 (view UCSC Genome Browser custom track)
Alignm length: 438
Alignm identity: 297
Alignm E-value: 0
Alignm gaps (pig, cow): 45, 207

Conread position: 4-435
Cow position: chr29:21421699-21422129 (view UCSC Genome Browser custom track)
Alignm length: 443
Alignm identity: 308
Alignm E-value: 0
Alignm gaps (pig, cow): 46, 111

Conread position: 4-441
Cow position: chr29:9081885-9082328 (view UCSC Genome Browser custom track)
Alignm length: 448
Alignm identity: 320
Alignm E-value: 0
Alignm gaps (pig, cow): 39, 57

Conread position: 4-441
Cow position: chr29:10645409-10645851 (view UCSC Genome Browser custom track)
Alignm length: 450
Alignm identity: 334
Alignm E-value: 0
Alignm gaps (pig, cow): 42, 200

Conread position: 4-465
Cow position: chr29:19621266-19621734 (view UCSC Genome Browser custom track)
Alignm length: 474
Alignm identity: 339
Alignm E-value: 0
Alignm gaps (pig, cow): 42, 270

Conread position: 4-469
Cow position: chr29:15624707-15625187 (view UCSC Genome Browser custom track)
Alignm length: 492
Alignm identity: 339
Alignm E-value: 0
Alignm gaps (pig, cow): 43, 226

Conread position: 4-480
Cow position: chr29:2839340-2839819 (view UCSC Genome Browser custom track)
Alignm length: 486
Alignm identity: 349
Alignm E-value: 0
Alignm gaps (pig, cow): 42, 253

Conread position: 4-484
Cow position: chr29:5237016-5236540 (view UCSC Genome Browser custom track)
Alignm length: 493
Alignm identity: 353
Alignm E-value: 0
Alignm gaps (pig, cow): 121, 48

Conread position: 4-484
Cow position: chr29:13850888-13851352 (view UCSC Genome Browser custom track)
Alignm length: 491
Alignm identity: 335
Alignm E-value: 0
Alignm gaps (pig, cow): 227, 33

Conread position: 4-485
Cow position: chr29:2948373-2948862 (view UCSC Genome Browser custom track)
Alignm length: 497
Alignm identity: 336
Alignm E-value: 0
Alignm gaps (pig, cow): 39, 210

Conread position: 4-485
Cow position: chr29:4632646-4633115 (view UCSC Genome Browser custom track)
Alignm length: 490
Alignm identity: 340
Alignm E-value: 0
Alignm gaps (pig, cow): 46, 117

Conread position: 4-485
Cow position: chr29:8625191-8625690 (view UCSC Genome Browser custom track)
Alignm length: 508
Alignm identity: 354
Alignm E-value: 0
Alignm gaps (pig, cow): 42, 273

Conread position: 4-485
Cow position: chr29:14209550-14210034 (view UCSC Genome Browser custom track)
Alignm length: 492
Alignm identity: 354
Alignm E-value: 0
Alignm gaps (pig, cow): 42, 271

Conread position: 4-485
Cow position: chr29:16346202-16345730 (view UCSC Genome Browser custom track)
Alignm length: 489
Alignm identity: 359
Alignm E-value: 0
Alignm gaps (pig, cow): 42, 210

Conread position: 4-485
Cow position: chr29:19655619-19655138 (view UCSC Genome Browser custom track)
Alignm length: 491
Alignm identity: 349
Alignm E-value: 0
Alignm gaps (pig, cow): 42, 215

Conread position: 4-485
Cow position: chr29:25930518-25931003 (view UCSC Genome Browser custom track)
Alignm length: 491
Alignm identity: 353
Alignm E-value: 0
Alignm gaps (pig, cow): 42, 197

Conread position: 4-485
Cow position: chr29:32542095-32541612 (view UCSC Genome Browser custom track)
Alignm length: 492
Alignm identity: 357
Alignm E-value: 0
Alignm gaps (pig, cow): 42, 123

Conread position: 4-485
Cow position: chr29:36596079-36596555 (view UCSC Genome Browser custom track)
Alignm length: 492
Alignm identity: 344
Alignm E-value: 0
Alignm gaps (pig, cow): 10, 16

Conread position: 4-485
Cow position: chr29:38228976-38228496 (view UCSC Genome Browser custom track)
Alignm length: 490
Alignm identity: 354
Alignm E-value: 0
Alignm gaps (pig, cow): 42, 179

Conread position: 4-485
Cow position: chr29:39077711-39078193 (view UCSC Genome Browser custom track)
Alignm length: 490
Alignm identity: 355
Alignm E-value: 0
Alignm gaps (pig, cow): 42, 227

Conread position: 4-485
Cow position: chr29:40501013-40501489 (view UCSC Genome Browser custom track)
Alignm length: 488
Alignm identity: 354
Alignm E-value: 0
Alignm gaps (pig, cow): 42, 136

Conread position: 4-485
Cow position: chr29:45206508-45206041 (view UCSC Genome Browser custom track)
Alignm length: 495
Alignm identity: 344
Alignm E-value: 0
Alignm gaps (pig, cow): 50, 114

Conread position: 4-488
Cow position: chr29:409261-409742 (view UCSC Genome Browser custom track)
Alignm length: 493
Alignm identity: 345
Alignm E-value: 0
Alignm gaps (pig, cow): 42, 24

Conread position: 4-490
Cow position: chr29:608647-609134 (view UCSC Genome Browser custom track)
Alignm length: 500
Alignm identity: 369
Alignm E-value: 0
Alignm gaps (pig, cow): 43, 209

Conread position: 4-490
Cow position: chr29:2464876-2465362 (view UCSC Genome Browser custom track)
Alignm length: 498
Alignm identity: 361
Alignm E-value: 0
Alignm gaps (pig, cow): 43, 163

Conread position: 4-490
Cow position: chr29:7846391-7845904 (view UCSC Genome Browser custom track)
Alignm length: 500
Alignm identity: 371
Alignm E-value: 0
Alignm gaps (pig, cow): 43, 209

Conread position: 4-490
Cow position: chr29:10022331-10022818 (view UCSC Genome Browser custom track)
Alignm length: 500
Alignm identity: 373
Alignm E-value: 0
Alignm gaps (pig, cow): 43, 209

Conread position: 4-490
Cow position: chr29:13621857-13622344 (view UCSC Genome Browser custom track)
Alignm length: 499
Alignm identity: 355
Alignm E-value: 0
Alignm gaps (pig, cow): 43, 201

Conread position: 4-490
Cow position: chr29:35298911-35298424 (view UCSC Genome Browser custom track)
Alignm length: 500
Alignm identity: 365
Alignm E-value: 0
Alignm gaps (pig, cow): 43, 209

Conread position: 4-493
Cow position: chr29:19526285-19526778 (view UCSC Genome Browser custom track)
Alignm length: 502
Alignm identity: 365
Alignm E-value: 0
Alignm gaps (pig, cow): 43, 269

Conread position: 4-500
Cow position: chr29:43325515-43325017 (view UCSC Genome Browser custom track)
Alignm length: 512
Alignm identity: 373
Alignm E-value: 0
Alignm gaps (pig, cow): 42, 192

Conread position: 4-502
Cow position: chr29:32288245-32287745 (view UCSC Genome Browser custom track)
Alignm length: 511
Alignm identity: 357
Alignm E-value: 0
Alignm gaps (pig, cow): 43, 66

Conread position: 4-503
Cow position: chr29:26162835-26163338 (view UCSC Genome Browser custom track)
Alignm length: 513
Alignm identity: 377
Alignm E-value: 0
Alignm gaps (pig, cow): 42, 264

Conread position: 4-505
Cow position: chr29:29703659-29704172 (view UCSC Genome Browser custom track)
Alignm length: 519
Alignm identity: 346
Alignm E-value: 0
Alignm gaps (pig, cow): 46, 272

Conread position: 5-310
Cow position: chr29:4517592-4517291 (view UCSC Genome Browser custom track)
Alignm length: 313
Alignm identity: 237
Alignm E-value: 0
Alignm gaps (pig, cow): 43, 53

Conread position: 6-361
Cow position: chr29:16014303-16014658 (view UCSC Genome Browser custom track)
Alignm length: 364
Alignm identity: 271
Alignm E-value: 0
Alignm gaps (pig, cow): 44, 31

Conread position: 6-402
Cow position: chr29:12794476-12794079 (view UCSC Genome Browser custom track)
Alignm length: 404
Alignm identity: 314
Alignm E-value: 0
Alignm gaps (pig, cow): 42, 134

Conread position: 6-485
Cow position: chr29:9640782-9641267 (view UCSC Genome Browser custom track)
Alignm length: 495
Alignm identity: 349
Alignm E-value: 0
Alignm gaps (pig, cow): 44, 6

Conread position: 6-485
Cow position: chr29:32892778-32892295 (view UCSC Genome Browser custom track)
Alignm length: 503
Alignm identity: 348
Alignm E-value: 0
Alignm gaps (pig, cow): 82, 6

Conread position: 7-485
Cow position: chr29:31183399-31182920 (view UCSC Genome Browser custom track)
Alignm length: 491
Alignm identity: 357
Alignm E-value: 0
Alignm gaps (pig, cow): 40, 9

Conread position: 11-261
Cow position: chr29:21536267-21536017 (view UCSC Genome Browser custom track)
Alignm length: 255
Alignm identity: 190
Alignm E-value: 8.40779e-45
Alignm gaps (pig, cow): 35, 116

Conread position: 11-448
Cow position: chr29:14452850-14452420 (view UCSC Genome Browser custom track)
Alignm length: 449
Alignm identity: 306
Alignm E-value: 0
Alignm gaps (pig, cow): 35, 47

Conread position: 11-502
Cow position: chr29:13584075-13583577 (view UCSC Genome Browser custom track)
Alignm length: 508
Alignm identity: 365
Alignm E-value: 0
Alignm gaps (pig, cow): 36, 202

Conread position: 12-372
Cow position: chr29:9853100-9853462 (view UCSC Genome Browser custom track)
Alignm length: 373
Alignm identity: 250
Alignm E-value: 1e-35
Alignm gaps (pig, cow): 34, 108

Conread position: 12-402
Cow position: chr29:31095599-31095977 (view UCSC Genome Browser custom track)
Alignm length: 397
Alignm identity: 244
Alignm E-value: 5.99994e-41
Alignm gaps (pig, cow): 35, 103

Conread position: 12-490
Cow position: chr29:13018683-13018212 (view UCSC Genome Browser custom track)
Alignm length: 488
Alignm identity: 349
Alignm E-value: 0
Alignm gaps (pig, cow): 38, 262

Conread position: 12-493
Cow position: chr29:32557759-32558243 (view UCSC Genome Browser custom track)
Alignm length: 494
Alignm identity: 355
Alignm E-value: 0
Alignm gaps (pig, cow): 35, 142

Conread position: 26-490
Cow position: chr29:21430876-21431338 (view UCSC Genome Browser custom track)
Alignm length: 475
Alignm identity: 352
Alignm E-value: 0
Alignm gaps (pig, cow): 21, 187

Conread position: 26-502
Cow position: chr29:19889559-19889082 (view UCSC Genome Browser custom track)
Alignm length: 490
Alignm identity: 351
Alignm E-value: 0
Alignm gaps (pig, cow): 21, 56

Conread position: 34-440
Cow position: chr29:7088803-7088402 (view UCSC Genome Browser custom track)
Alignm length: 414
Alignm identity: 269
Alignm E-value: 3e-35
Alignm gaps (pig, cow): 16, 124

Conread position: 45-476
Cow position: chr29:26698444-26698881 (view UCSC Genome Browser custom track)
Alignm length: 447
Alignm identity: 285
Alignm E-value: 6e-31
Alignm gaps (pig, cow): 24, 115

Conread position: 48-485
Cow position: chr29:6408183-6408606 (view UCSC Genome Browser custom track)
Alignm length: 445
Alignm identity: 296
Alignm E-value: 4e-38
Alignm gaps (pig, cow): 188, 46

Conread position: 48-485
Cow position: chr29:34586222-34585801 (view UCSC Genome Browser custom track)
Alignm length: 442
Alignm identity: 284
Alignm E-value: 2e-31
Alignm gaps (pig, cow): 164, 79

Conread position: 59-485
Cow position: chr29:252890-252480 (view UCSC Genome Browser custom track)
Alignm length: 435
Alignm identity: 294
Alignm E-value: 2e-40
Alignm gaps (pig, cow): 158, 39

Conread position: 59-485
Cow position: chr29:2183554-2183145 (view UCSC Genome Browser custom track)
Alignm length: 433
Alignm identity: 282
Alignm E-value: 2e-32
Alignm gaps (pig, cow): 104, 70

Conread position: 66-489
Cow position: chr29:27813025-27812596 (view UCSC Genome Browser custom track)
Alignm length: 439
Alignm identity: 301
Alignm E-value: 0
Alignm gaps (pig, cow): 50, 150

Conread position: 83-459
Cow position: chr29:17152179-17151791 (view UCSC Genome Browser custom track)
Alignm length: 396
Alignm identity: 285
Alignm E-value: 0
Alignm gaps (pig, cow): 48, 128

Conread position: 91-353
Cow position: chr29:27261268-27261533 (view UCSC Genome Browser custom track)
Alignm length: 268
Alignm identity: 187
Alignm E-value: 1e-35
Alignm gaps (pig, cow): 129, 181

Conread position: 111-490
Cow position: chr29:27179860-27180239 (view UCSC Genome Browser custom track)
Alignm length: 392
Alignm identity: 284
Alignm E-value: 0
Alignm gaps (pig, cow): 120, 101

Conread position: 114-485
Cow position: chr29:37165957-37165602 (view UCSC Genome Browser custom track)
Alignm length: 374
Alignm identity: 246
Alignm E-value: 8e-34
Alignm gaps (pig, cow): 249, 80

Conread position: 208-441
Cow position: chr29:42204893-42204656 (view UCSC Genome Browser custom track)
Alignm length: 240
Alignm identity: 165
Alignm E-value: 4e-28
Alignm gaps (pig, cow): 33, 109

Conread position: 208-485
Cow position: chr29:800794-801073 (view UCSC Genome Browser custom track)
Alignm length: 285
Alignm identity: 193
Alignm E-value: 5e-30
Alignm gaps (pig, cow): 17, 59

Conread position: 225-490
Cow position: chr29:5959352-5959089 (view UCSC Genome Browser custom track)
Alignm length: 272
Alignm identity: 188
Alignm E-value: 1e-28
Alignm gaps (pig, cow): 20, 88

Conread position: 239-490
Cow position: chr29:27979159-27979406 (view UCSC Genome Browser custom track)
Alignm length: 257
Alignm identity: 182
Alignm E-value: 5e-30
Alignm gaps (pig, cow): 97, 61

Conread position: 239-502
Cow position: chr29:36634622-36634886 (view UCSC Genome Browser custom track)
Alignm length: 272
Alignm identity: 194
Alignm E-value: 2e-33
Alignm gaps (pig, cow): 25, 31

Conread position: 239-505
Cow position: chr29:42804153-42803887 (view UCSC Genome Browser custom track)
Alignm length: 275
Alignm identity: 184
Alignm E-value: 7e-22
Alignm gaps (pig, cow): 25, 34

Conread position: 247-485
Cow position: chr29:45461500-45461265 (view UCSC Genome Browser custom track)
Alignm length: 243
Alignm identity: 164
Alignm E-value: 8e-23
Alignm gaps (pig, cow): 16, 23

Show alignments to all cow chromosomes.