Cow genome map
Conread name: | Pig3-SRG8027B03 |
Conread position: | 1-324 |
Cow position: | chr29:32642232-32641920 (view UCSC Genome Browser custom track) |
Alignm length: | 330 |
Alignm identity: | 231 |
Alignm E-value: | 4e-37 |
Alignm gaps (pig, cow): | 46, 28 |
Conread position: | 1-485 |
Cow position: | chr29:7429117-7429608 (view UCSC Genome Browser custom track) |
Alignm length: | 496 |
Alignm identity: | 354 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 8, 42 |
Conread position: | 1-485 |
Cow position: | chr29:34797804-34798293 (view UCSC Genome Browser custom track) |
Alignm length: | 500 |
Alignm identity: | 357 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 9, 215 |
Conread position: | 1-490 |
Cow position: | chr29:38206659-38207150 (view UCSC Genome Browser custom track) |
Alignm length: | 504 |
Alignm identity: | 369 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 46, 159 |
Conread position: | 2-441 |
Cow position: | chr29:17407129-17406684 (view UCSC Genome Browser custom track) |
Alignm length: | 454 |
Alignm identity: | 328 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 10, 213 |
Conread position: | 2-500 |
Cow position: | chr29:647812-647308 (view UCSC Genome Browser custom track) |
Alignm length: | 519 |
Alignm identity: | 362 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 10, 117 |
Conread position: | 3-485 |
Cow position: | chr29:2692162-2691681 (view UCSC Genome Browser custom track) |
Alignm length: | 492 |
Alignm identity: | 354 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 43, 23 |
Conread position: | 4-268 |
Cow position: | chr29:14082727-14082992 (view UCSC Genome Browser custom track) |
Alignm length: | 270 |
Alignm identity: | 203 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 43, 136 |
Conread position: | 4-296 |
Cow position: | chr29:9962426-9962138 (view UCSC Genome Browser custom track) |
Alignm length: | 298 |
Alignm identity: | 214 |
Alignm E-value: | 2e-40 |
Alignm gaps (pig, cow): | 42, 111 |
Conread position: | 4-304 |
Cow position: | chr29:31122832-31122525 (view UCSC Genome Browser custom track) |
Alignm length: | 309 |
Alignm identity: | 225 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 43, 273 |
Conread position: | 4-310 |
Cow position: | chr29:18022562-18022260 (view UCSC Genome Browser custom track) |
Alignm length: | 312 |
Alignm identity: | 217 |
Alignm E-value: | 4e-38 |
Alignm gaps (pig, cow): | 40, 120 |
Conread position: | 4-328 |
Cow position: | chr29:16688831-16688510 (view UCSC Genome Browser custom track) |
Alignm length: | 333 |
Alignm identity: | 243 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 43, 106 |
Conread position: | 4-366 |
Cow position: | chr29:22951173-22951539 (view UCSC Genome Browser custom track) |
Alignm length: | 374 |
Alignm identity: | 266 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 19, 210 |
Conread position: | 4-416 |
Cow position: | chr29:13075438-13075037 (view UCSC Genome Browser custom track) |
Alignm length: | 422 |
Alignm identity: | 285 |
Alignm E-value: | 6.00036e-42 |
Alignm gaps (pig, cow): | 149, 32 |
Conread position: | 4-432 |
Cow position: | chr29:40611876-40612305 (view UCSC Genome Browser custom track) |
Alignm length: | 434 |
Alignm identity: | 289 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 42, 267 |
Conread position: | 4-434 |
Cow position: | chr29:27032429-27032002 (view UCSC Genome Browser custom track) |
Alignm length: | 438 |
Alignm identity: | 297 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 45, 207 |
Conread position: | 4-435 |
Cow position: | chr29:21421699-21422129 (view UCSC Genome Browser custom track) |
Alignm length: | 443 |
Alignm identity: | 308 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 46, 111 |
Conread position: | 4-441 |
Cow position: | chr29:9081885-9082328 (view UCSC Genome Browser custom track) |
Alignm length: | 448 |
Alignm identity: | 320 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 39, 57 |
Conread position: | 4-441 |
Cow position: | chr29:10645409-10645851 (view UCSC Genome Browser custom track) |
Alignm length: | 450 |
Alignm identity: | 334 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 42, 200 |
Conread position: | 4-465 |
Cow position: | chr29:19621266-19621734 (view UCSC Genome Browser custom track) |
Alignm length: | 474 |
Alignm identity: | 339 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 42, 270 |
Conread position: | 4-469 |
Cow position: | chr29:15624707-15625187 (view UCSC Genome Browser custom track) |
Alignm length: | 492 |
Alignm identity: | 339 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 43, 226 |
Conread position: | 4-480 |
Cow position: | chr29:2839340-2839819 (view UCSC Genome Browser custom track) |
Alignm length: | 486 |
Alignm identity: | 349 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 42, 253 |
Conread position: | 4-484 |
Cow position: | chr29:5237016-5236540 (view UCSC Genome Browser custom track) |
Alignm length: | 493 |
Alignm identity: | 353 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 121, 48 |
Conread position: | 4-484 |
Cow position: | chr29:13850888-13851352 (view UCSC Genome Browser custom track) |
Alignm length: | 491 |
Alignm identity: | 335 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 227, 33 |
Conread position: | 4-485 |
Cow position: | chr29:2948373-2948862 (view UCSC Genome Browser custom track) |
Alignm length: | 497 |
Alignm identity: | 336 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 39, 210 |
Conread position: | 4-485 |
Cow position: | chr29:4632646-4633115 (view UCSC Genome Browser custom track) |
Alignm length: | 490 |
Alignm identity: | 340 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 46, 117 |
Conread position: | 4-485 |
Cow position: | chr29:8625191-8625690 (view UCSC Genome Browser custom track) |
Alignm length: | 508 |
Alignm identity: | 354 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 42, 273 |
Conread position: | 4-485 |
Cow position: | chr29:14209550-14210034 (view UCSC Genome Browser custom track) |
Alignm length: | 492 |
Alignm identity: | 354 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 42, 271 |
Conread position: | 4-485 |
Cow position: | chr29:16346202-16345730 (view UCSC Genome Browser custom track) |
Alignm length: | 489 |
Alignm identity: | 359 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 42, 210 |
Conread position: | 4-485 |
Cow position: | chr29:19655619-19655138 (view UCSC Genome Browser custom track) |
Alignm length: | 491 |
Alignm identity: | 349 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 42, 215 |
Conread position: | 4-485 |
Cow position: | chr29:25930518-25931003 (view UCSC Genome Browser custom track) |
Alignm length: | 491 |
Alignm identity: | 353 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 42, 197 |
Conread position: | 4-485 |
Cow position: | chr29:32542095-32541612 (view UCSC Genome Browser custom track) |
Alignm length: | 492 |
Alignm identity: | 357 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 42, 123 |
Conread position: | 4-485 |
Cow position: | chr29:36596079-36596555 (view UCSC Genome Browser custom track) |
Alignm length: | 492 |
Alignm identity: | 344 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 10, 16 |
Conread position: | 4-485 |
Cow position: | chr29:38228976-38228496 (view UCSC Genome Browser custom track) |
Alignm length: | 490 |
Alignm identity: | 354 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 42, 179 |
Conread position: | 4-485 |
Cow position: | chr29:39077711-39078193 (view UCSC Genome Browser custom track) |
Alignm length: | 490 |
Alignm identity: | 355 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 42, 227 |
Conread position: | 4-485 |
Cow position: | chr29:40501013-40501489 (view UCSC Genome Browser custom track) |
Alignm length: | 488 |
Alignm identity: | 354 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 42, 136 |
Conread position: | 4-485 |
Cow position: | chr29:45206508-45206041 (view UCSC Genome Browser custom track) |
Alignm length: | 495 |
Alignm identity: | 344 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 50, 114 |
Conread position: | 4-488 |
Cow position: | chr29:409261-409742 (view UCSC Genome Browser custom track) |
Alignm length: | 493 |
Alignm identity: | 345 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 42, 24 |
Conread position: | 4-490 |
Cow position: | chr29:608647-609134 (view UCSC Genome Browser custom track) |
Alignm length: | 500 |
Alignm identity: | 369 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 43, 209 |
Conread position: | 4-490 |
Cow position: | chr29:2464876-2465362 (view UCSC Genome Browser custom track) |
Alignm length: | 498 |
Alignm identity: | 361 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 43, 163 |
Conread position: | 4-490 |
Cow position: | chr29:7846391-7845904 (view UCSC Genome Browser custom track) |
Alignm length: | 500 |
Alignm identity: | 371 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 43, 209 |
Conread position: | 4-490 |
Cow position: | chr29:10022331-10022818 (view UCSC Genome Browser custom track) |
Alignm length: | 500 |
Alignm identity: | 373 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 43, 209 |
Conread position: | 4-490 |
Cow position: | chr29:13621857-13622344 (view UCSC Genome Browser custom track) |
Alignm length: | 499 |
Alignm identity: | 355 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 43, 201 |
Conread position: | 4-490 |
Cow position: | chr29:35298911-35298424 (view UCSC Genome Browser custom track) |
Alignm length: | 500 |
Alignm identity: | 365 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 43, 209 |
Conread position: | 4-493 |
Cow position: | chr29:19526285-19526778 (view UCSC Genome Browser custom track) |
Alignm length: | 502 |
Alignm identity: | 365 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 43, 269 |
Conread position: | 4-500 |
Cow position: | chr29:43325515-43325017 (view UCSC Genome Browser custom track) |
Alignm length: | 512 |
Alignm identity: | 373 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 42, 192 |
Conread position: | 4-502 |
Cow position: | chr29:32288245-32287745 (view UCSC Genome Browser custom track) |
Alignm length: | 511 |
Alignm identity: | 357 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 43, 66 |
Conread position: | 4-503 |
Cow position: | chr29:26162835-26163338 (view UCSC Genome Browser custom track) |
Alignm length: | 513 |
Alignm identity: | 377 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 42, 264 |
Conread position: | 4-505 |
Cow position: | chr29:29703659-29704172 (view UCSC Genome Browser custom track) |
Alignm length: | 519 |
Alignm identity: | 346 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 46, 272 |
Conread position: | 5-310 |
Cow position: | chr29:4517592-4517291 (view UCSC Genome Browser custom track) |
Alignm length: | 313 |
Alignm identity: | 237 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 43, 53 |
Conread position: | 6-361 |
Cow position: | chr29:16014303-16014658 (view UCSC Genome Browser custom track) |
Alignm length: | 364 |
Alignm identity: | 271 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 44, 31 |
Conread position: | 6-402 |
Cow position: | chr29:12794476-12794079 (view UCSC Genome Browser custom track) |
Alignm length: | 404 |
Alignm identity: | 314 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 42, 134 |
Conread position: | 6-485 |
Cow position: | chr29:9640782-9641267 (view UCSC Genome Browser custom track) |
Alignm length: | 495 |
Alignm identity: | 349 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 44, 6 |
Conread position: | 6-485 |
Cow position: | chr29:32892778-32892295 (view UCSC Genome Browser custom track) |
Alignm length: | 503 |
Alignm identity: | 348 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 82, 6 |
Conread position: | 7-485 |
Cow position: | chr29:31183399-31182920 (view UCSC Genome Browser custom track) |
Alignm length: | 491 |
Alignm identity: | 357 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 40, 9 |
Conread position: | 11-261 |
Cow position: | chr29:21536267-21536017 (view UCSC Genome Browser custom track) |
Alignm length: | 255 |
Alignm identity: | 190 |
Alignm E-value: | 8.40779e-45 |
Alignm gaps (pig, cow): | 35, 116 |
Conread position: | 11-448 |
Cow position: | chr29:14452850-14452420 (view UCSC Genome Browser custom track) |
Alignm length: | 449 |
Alignm identity: | 306 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 35, 47 |
Conread position: | 11-502 |
Cow position: | chr29:13584075-13583577 (view UCSC Genome Browser custom track) |
Alignm length: | 508 |
Alignm identity: | 365 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 36, 202 |
Conread position: | 12-372 |
Cow position: | chr29:9853100-9853462 (view UCSC Genome Browser custom track) |
Alignm length: | 373 |
Alignm identity: | 250 |
Alignm E-value: | 1e-35 |
Alignm gaps (pig, cow): | 34, 108 |
Conread position: | 12-402 |
Cow position: | chr29:31095599-31095977 (view UCSC Genome Browser custom track) |
Alignm length: | 397 |
Alignm identity: | 244 |
Alignm E-value: | 5.99994e-41 |
Alignm gaps (pig, cow): | 35, 103 |
Conread position: | 12-490 |
Cow position: | chr29:13018683-13018212 (view UCSC Genome Browser custom track) |
Alignm length: | 488 |
Alignm identity: | 349 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 38, 262 |
Conread position: | 12-493 |
Cow position: | chr29:32557759-32558243 (view UCSC Genome Browser custom track) |
Alignm length: | 494 |
Alignm identity: | 355 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 35, 142 |
Conread position: | 26-490 |
Cow position: | chr29:21430876-21431338 (view UCSC Genome Browser custom track) |
Alignm length: | 475 |
Alignm identity: | 352 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 21, 187 |
Conread position: | 26-502 |
Cow position: | chr29:19889559-19889082 (view UCSC Genome Browser custom track) |
Alignm length: | 490 |
Alignm identity: | 351 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 21, 56 |
Conread position: | 34-440 |
Cow position: | chr29:7088803-7088402 (view UCSC Genome Browser custom track) |
Alignm length: | 414 |
Alignm identity: | 269 |
Alignm E-value: | 3e-35 |
Alignm gaps (pig, cow): | 16, 124 |
Conread position: | 45-476 |
Cow position: | chr29:26698444-26698881 (view UCSC Genome Browser custom track) |
Alignm length: | 447 |
Alignm identity: | 285 |
Alignm E-value: | 6e-31 |
Alignm gaps (pig, cow): | 24, 115 |
Conread position: | 48-485 |
Cow position: | chr29:6408183-6408606 (view UCSC Genome Browser custom track) |
Alignm length: | 445 |
Alignm identity: | 296 |
Alignm E-value: | 4e-38 |
Alignm gaps (pig, cow): | 188, 46 |
Conread position: | 48-485 |
Cow position: | chr29:34586222-34585801 (view UCSC Genome Browser custom track) |
Alignm length: | 442 |
Alignm identity: | 284 |
Alignm E-value: | 2e-31 |
Alignm gaps (pig, cow): | 164, 79 |
Conread position: | 59-485 |
Cow position: | chr29:252890-252480 (view UCSC Genome Browser custom track) |
Alignm length: | 435 |
Alignm identity: | 294 |
Alignm E-value: | 2e-40 |
Alignm gaps (pig, cow): | 158, 39 |
Conread position: | 59-485 |
Cow position: | chr29:2183554-2183145 (view UCSC Genome Browser custom track) |
Alignm length: | 433 |
Alignm identity: | 282 |
Alignm E-value: | 2e-32 |
Alignm gaps (pig, cow): | 104, 70 |
Conread position: | 66-489 |
Cow position: | chr29:27813025-27812596 (view UCSC Genome Browser custom track) |
Alignm length: | 439 |
Alignm identity: | 301 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 50, 150 |
Conread position: | 83-459 |
Cow position: | chr29:17152179-17151791 (view UCSC Genome Browser custom track) |
Alignm length: | 396 |
Alignm identity: | 285 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 48, 128 |
Conread position: | 91-353 |
Cow position: | chr29:27261268-27261533 (view UCSC Genome Browser custom track) |
Alignm length: | 268 |
Alignm identity: | 187 |
Alignm E-value: | 1e-35 |
Alignm gaps (pig, cow): | 129, 181 |
Conread position: | 111-490 |
Cow position: | chr29:27179860-27180239 (view UCSC Genome Browser custom track) |
Alignm length: | 392 |
Alignm identity: | 284 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 120, 101 |
Conread position: | 114-485 |
Cow position: | chr29:37165957-37165602 (view UCSC Genome Browser custom track) |
Alignm length: | 374 |
Alignm identity: | 246 |
Alignm E-value: | 8e-34 |
Alignm gaps (pig, cow): | 249, 80 |
Conread position: | 208-441 |
Cow position: | chr29:42204893-42204656 (view UCSC Genome Browser custom track) |
Alignm length: | 240 |
Alignm identity: | 165 |
Alignm E-value: | 4e-28 |
Alignm gaps (pig, cow): | 33, 109 |
Conread position: | 208-485 |
Cow position: | chr29:800794-801073 (view UCSC Genome Browser custom track) |
Alignm length: | 285 |
Alignm identity: | 193 |
Alignm E-value: | 5e-30 |
Alignm gaps (pig, cow): | 17, 59 |
Conread position: | 225-490 |
Cow position: | chr29:5959352-5959089 (view UCSC Genome Browser custom track) |
Alignm length: | 272 |
Alignm identity: | 188 |
Alignm E-value: | 1e-28 |
Alignm gaps (pig, cow): | 20, 88 |
Conread position: | 239-490 |
Cow position: | chr29:27979159-27979406 (view UCSC Genome Browser custom track) |
Alignm length: | 257 |
Alignm identity: | 182 |
Alignm E-value: | 5e-30 |
Alignm gaps (pig, cow): | 97, 61 |
Conread position: | 239-502 |
Cow position: | chr29:36634622-36634886 (view UCSC Genome Browser custom track) |
Alignm length: | 272 |
Alignm identity: | 194 |
Alignm E-value: | 2e-33 |
Alignm gaps (pig, cow): | 25, 31 |
Conread position: | 239-505 |
Cow position: | chr29:42804153-42803887 (view UCSC Genome Browser custom track) |
Alignm length: | 275 |
Alignm identity: | 184 |
Alignm E-value: | 7e-22 |
Alignm gaps (pig, cow): | 25, 34 |
Conread position: | 247-485 |
Cow position: | chr29:45461500-45461265 (view UCSC Genome Browser custom track) |
Alignm length: | 243 |
Alignm identity: | 164 |
Alignm E-value: | 8e-23 |
Alignm gaps (pig, cow): | 16, 23 |
Show alignments to all cow chromosomes.