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Cow genome map

           
Conread name:
           
Pig3-SRG8028A22
        

               
Conread position:
               
62-596
               

               
Cow position:
               
chr22:6753996-6754508 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
544
               

               
Alignm identity:
               
376
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
107, 30
               

               
Conread position:
               
81-367
               

               
Cow position:
               
chr22:3430448-3430158 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
297
               

               
Alignm identity:
               
200
               

               
Alignm E-value:
               
2e-27
               

               
Alignm gaps (pig, cow):
               
87, 133
               

               
Conread position:
               
83-604
               

               
Cow position:
               
chr22:3325838-3325320 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
532
               

               
Alignm identity:
               
344
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
85, 130
               

               
Conread position:
               
88-425
               

               
Cow position:
               
chr22:25690035-25690368 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
349
               

               
Alignm identity:
               
241
               

               
Alignm E-value:
               
1e-33
               

               
Alignm gaps (pig, cow):
               
8, 20
               

               
Conread position:
               
92-605
               

               
Cow position:
               
chr22:5282755-5282245 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
533
               

               
Alignm identity:
               
362
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
13, 29
               

               
Conread position:
               
94-597
               

               
Cow position:
               
chr22:32651753-32651253 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
527
               

               
Alignm identity:
               
353
               

               
Alignm E-value:
               
4.06377e-44
               

               
Alignm gaps (pig, cow):
               
75, 37
               

               
Conread position:
               
95-493
               

               
Cow position:
               
chr22:3566410-3566021 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
408
               

               
Alignm identity:
               
262
               

               
Alignm E-value:
               
2e-25
               

               
Alignm gaps (pig, cow):
               
19, 124
               

               
Conread position:
               
95-614
               

               
Cow position:
               
chr22:24610845-24611347 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
531
               

               
Alignm identity:
               
375
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
87, 41
               

               
Conread position:
               
98-367
               

               
Cow position:
               
chr22:35215785-35215517 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
275
               

               
Alignm identity:
               
193
               

               
Alignm E-value:
               
1e-35
               

               
Alignm gaps (pig, cow):
               
71, 30
               

               
Conread position:
               
100-584
               

               
Cow position:
               
chr22:10315330-10314837 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
506
               

               
Alignm identity:
               
312
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
69, 221
               

               
Conread position:
               
100-614
               

               
Cow position:
               
chr22:41044676-41045185 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
527
               

               
Alignm identity:
               
350
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
67, 28
               

               
Conread position:
               
101-448
               

               
Cow position:
               
chr22:47556094-47555741 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
361
               

               
Alignm identity:
               
249
               

               
Alignm E-value:
               
2.99878e-43
               

               
Alignm gaps (pig, cow):
               
61, 121
               

               
Conread position:
               
101-480
               

               
Cow position:
               
chr22:34736079-34735726 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
383
               

               
Alignm identity:
               
259
               

               
Alignm E-value:
               
1e-32
               

               
Alignm gaps (pig, cow):
               
190, 40
               

               
Conread position:
               
101-613
               

               
Cow position:
               
chr22:33485394-33485873 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
517
               

               
Alignm identity:
               
368
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
38, 11
               

               
Conread position:
               
101-614
               

               
Cow position:
               
chr22:14881876-14882382 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
524
               

               
Alignm identity:
               
357
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
53, 29
               

               
Conread position:
               
101-619
               

               
Cow position:
               
chr22:9127628-9127130 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
521
               

               
Alignm identity:
               
378
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
193, 18
               

               
Conread position:
               
101-629
               

               
Cow position:
               
chr22:37029375-37029888 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
532
               

               
Alignm identity:
               
392
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
69, 27
               

               
Conread position:
               
102-346
               

               
Cow position:
               
chr22:24071427-24071657 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
246
               

               
Alignm identity:
               
169
               

               
Alignm E-value:
               
3e-22
               

               
Alignm gaps (pig, cow):
               
81, 26
               

               
Conread position:
               
102-521
               

               
Cow position:
               
chr22:12800907-12800481 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
433
               

               
Alignm identity:
               
282
               

               
Alignm E-value:
               
2e-37
               

               
Alignm gaps (pig, cow):
               
40, 125
               

               
Conread position:
               
102-550
               

               
Cow position:
               
chr22:30999121-30998690 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
457
               

               
Alignm identity:
               
318
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
67, 19
               

               
Conread position:
               
102-609
               

               
Cow position:
               
chr22:11696963-11697475 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
522
               

               
Alignm identity:
               
361
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
80, 109
               

               
Conread position:
               
103-615
               

               
Cow position:
               
chr22:9372758-9372248 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
532
               

               
Alignm identity:
               
390
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
10, 116
               

               
Conread position:
               
104-614
               

               
Cow position:
               
chr22:43398230-43397748 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
515
               

               
Alignm identity:
               
379
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
35, 109
               

               
Conread position:
               
105-587
               

               
Cow position:
               
chr22:7165197-7164709 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
500
               

               
Alignm identity:
               
355
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
38, 19
               

               
Conread position:
               
106-420
               

               
Cow position:
               
chr22:12678194-12678502 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
320
               

               
Alignm identity:
               
245
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
67, 30
               

               
Conread position:
               
106-499
               

               
Cow position:
               
chr22:10416454-10416054 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
412
               

               
Alignm identity:
               
290
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
183, 63
               

               
Conread position:
               
106-597
               

               
Cow position:
               
chr22:18838476-18838001 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
499
               

               
Alignm identity:
               
334
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
61, 23
               

               
Conread position:
               
107-323
               

               
Cow position:
               
chr22:8357804-8357599 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
219
               

               
Alignm identity:
               
157
               

               
Alignm E-value:
               
5e-26
               

               
Alignm gaps (pig, cow):
               
75, 35
               

               
Conread position:
               
108-384
               

               
Cow position:
               
chr22:12188246-12188527 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
284
               

               
Alignm identity:
               
203
               

               
Alignm E-value:
               
8.00001e-41
               

               
Alignm gaps (pig, cow):
               
8, 242
               

               
Conread position:
               
108-384
               

               
Cow position:
               
chr22:12195332-12195614 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
285
               

               
Alignm identity:
               
206
               

               
Alignm E-value:
               
3.00018e-42
               

               
Alignm gaps (pig, cow):
               
8, 243
               

               
Conread position:
               
109-361
               

               
Cow position:
               
chr22:23372630-23372889 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
263
               

               
Alignm identity:
               
192
               

               
Alignm E-value:
               
6e-38
               

               
Alignm gaps (pig, cow):
               
27, 102
               

               
Conread position:
               
111-579
               

               
Cow position:
               
chr22:4108505-4108975 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
483
               

               
Alignm identity:
               
327
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
58, 104
               

               
Conread position:
               
111-614
               

               
Cow position:
               
chr22:16911578-16912064 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
512
               

               
Alignm identity:
               
327
               

               
Alignm E-value:
               
3e-31
               

               
Alignm gaps (pig, cow):
               
28, 9
               

               
Conread position:
               
113-428
               

               
Cow position:
               
chr22:17652651-17652343 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
323
               

               
Alignm identity:
               
234
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
56, 14
               

               
Conread position:
               
114-289
               

               
Cow position:
               
chr22:30583878-30583702 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
182
               

               
Alignm identity:
               
132
               

               
Alignm E-value:
               
3e-21
               

               
Alignm gaps (pig, cow):
               
27, 17
               

               
Conread position:
               
114-603
               

               
Cow position:
               
chr22:14372389-14371907 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
513
               

               
Alignm identity:
               
359
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
13, 103
               

               
Conread position:
               
115-363
               

               
Cow position:
               
chr22:23265427-23265679 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
258
               

               
Alignm identity:
               
184
               

               
Alignm E-value:
               
3e-32
               

               
Alignm gaps (pig, cow):
               
24, 102
               

               
Conread position:
               
115-595
               

               
Cow position:
               
chr22:8115865-8116334 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
486
               

               
Alignm identity:
               
322
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
32, 102
               

               
Conread position:
               
115-596
               

               
Cow position:
               
chr22:5595589-5596042 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
489
               

               
Alignm identity:
               
335
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
23, 14
               

               
Conread position:
               
115-636
               

               
Cow position:
               
chr22:44741290-44740812 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
526
               

               
Alignm identity:
               
373
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
7, 75
               

               
Conread position:
               
116-334
               

               
Cow position:
               
chr22:12777168-12777375 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
224
               

               
Alignm identity:
               
162
               

               
Alignm E-value:
               
2e-25
               

               
Alignm gaps (pig, cow):
               
54, 8
               

               
Conread position:
               
116-361
               

               
Cow position:
               
chr22:23036404-23036139 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
267
               

               
Alignm identity:
               
190
               

               
Alignm E-value:
               
9e-31
               

               
Alignm gaps (pig, cow):
               
43, 15
               

               
Conread position:
               
116-425
               

               
Cow position:
               
chr22:2408910-2409207 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
317
               

               
Alignm identity:
               
209
               

               
Alignm E-value:
               
3e-21
               

               
Alignm gaps (pig, cow):
               
26, 102
               

               
Conread position:
               
116-611
               

               
Cow position:
               
chr22:8138037-8138526 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
504
               

               
Alignm identity:
               
338
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
52, 275
               

               
Conread position:
               
116-623
               

               
Cow position:
               
chr22:23833504-23833016 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
517
               

               
Alignm identity:
               
349
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
172, 13
               

               
Conread position:
               
117-331
               

               
Cow position:
               
chr22:35533010-35533227 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
221
               

               
Alignm identity:
               
161
               

               
Alignm E-value:
               
1e-31
               

               
Alignm gaps (pig, cow):
               
37, 180
               

               
Conread position:
               
117-337
               

               
Cow position:
               
chr22:23630139-23630352 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
226
               

               
Alignm identity:
               
159
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
52, 91
               

               
Conread position:
               
117-343
               

               
Cow position:
               
chr22:8327955-8327739 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
234
               

               
Alignm identity:
               
169
               

               
Alignm E-value:
               
4e-23
               

               
Alignm gaps (pig, cow):
               
52, 12
               

               
Conread position:
               
117-351
               

               
Cow position:
               
chr22:23440059-23440308 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
254
               

               
Alignm identity:
               
177
               

               
Alignm E-value:
               
4e-23
               

               
Alignm gaps (pig, cow):
               
52, 19
               

               
Conread position:
               
117-360
               

               
Cow position:
               
chr22:14641641-14641880 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
250
               

               
Alignm identity:
               
172
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
50, 7
               

               
Conread position:
               
117-365
               

               
Cow position:
               
chr22:10557491-10557252 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
253
               

               
Alignm identity:
               
176
               

               
Alignm E-value:
               
4e-24
               

               
Alignm gaps (pig, cow):
               
14, 35
               

               
Conread position:
               
117-424
               

               
Cow position:
               
chr22:34619027-34618710 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
318
               

               
Alignm identity:
               
227
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
13, 0
               

               
Conread position:
               
117-425
               

               
Cow position:
               
chr22:27275681-27275377 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
316
               

               
Alignm identity:
               
221
               

               
Alignm E-value:
               
2e-36
               

               
Alignm gaps (pig, cow):
               
52, 14
               

               
Conread position:
               
117-507
               

               
Cow position:
               
chr22:27730255-27729885 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
397
               

               
Alignm identity:
               
277
               

               
Alignm E-value:
               
2.99878e-43
               

               
Alignm gaps (pig, cow):
               
51, 24
               

               
Conread position:
               
117-578
               

               
Cow position:
               
chr22:25236913-25237376 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
481
               

               
Alignm identity:
               
339
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
52, 11
               

               
Conread position:
               
117-604
               

               
Cow position:
               
chr22:33447860-33448336 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
497
               

               
Alignm identity:
               
353
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
17, 98
               

               
Conread position:
               
117-664
               

               
Cow position:
               
chr22:15950174-15950698 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
550
               

               
Alignm identity:
               
374
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
65, 13
               

               
Conread position:
               
118-333
               

               
Cow position:
               
chr22:12673116-12673332 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
221
               

               
Alignm identity:
               
154
               

               
Alignm E-value:
               
2e-25
               

               
Alignm gaps (pig, cow):
               
50, 96
               

               
Conread position:
               
118-551
               

               
Cow position:
               
chr22:11601251-11600825 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
441
               

               
Alignm identity:
               
310
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
51, 96
               

               
Conread position:
               
119-400
               

               
Cow position:
               
chr22:6289284-6289558 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
288
               

               
Alignm identity:
               
196
               

               
Alignm E-value:
               
6e-27
               

               
Alignm gaps (pig, cow):
               
50, 95
               

               
Conread position:
               
119-414
               

               
Cow position:
               
chr22:14006393-14006106 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
297
               

               
Alignm identity:
               
197
               

               
Alignm E-value:
               
7e-29
               

               
Alignm gaps (pig, cow):
               
172, 65
               

               
Conread position:
               
119-428
               

               
Cow position:
               
chr22:14214155-14214452 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
317
               

               
Alignm identity:
               
218
               

               
Alignm E-value:
               
2e-29
               

               
Alignm gaps (pig, cow):
               
44, 10
               

               
Conread position:
               
120-548
               

               
Cow position:
               
chr22:2643327-2642912 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
437
               

               
Alignm identity:
               
288
               

               
Alignm E-value:
               
4e-34
               

               
Alignm gaps (pig, cow):
               
46, 121
               

               
Conread position:
               
120-585
               

               
Cow position:
               
chr22:24732348-24732789 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
468
               

               
Alignm identity:
               
310
               

               
Alignm E-value:
               
1.00053e-42
               

               
Alignm gaps (pig, cow):
               
63, 23
               

               
Conread position:
               
121-352
               

               
Cow position:
               
chr22:14488150-14487919 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
237
               

               
Alignm identity:
               
169
               

               
Alignm E-value:
               
3e-31
               

               
Alignm gaps (pig, cow):
               
48, 9
               

               
Conread position:
               
121-361
               

               
Cow position:
               
chr22:39446508-39446267 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
247
               

               
Alignm identity:
               
178
               

               
Alignm E-value:
               
1e-33
               

               
Alignm gaps (pig, cow):
               
5, 93
               

               
Conread position:
               
121-381
               

               
Cow position:
               
chr22:16235289-16235548 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
267
               

               
Alignm identity:
               
184
               

               
Alignm E-value:
               
2e-28
               

               
Alignm gaps (pig, cow):
               
45, 10
               

               
Conread position:
               
121-409
               

               
Cow position:
               
chr22:21527122-21526848 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
293
               

               
Alignm identity:
               
205
               

               
Alignm E-value:
               
3e-32
               

               
Alignm gaps (pig, cow):
               
44, 92
               

               
Conread position:
               
121-416
               

               
Cow position:
               
chr22:43704654-43704940 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
302
               

               
Alignm identity:
               
200
               

               
Alignm E-value:
               
3e-22
               

               
Alignm gaps (pig, cow):
               
47, 93
               

               
Conread position:
               
121-451
               

               
Cow position:
               
chr22:37947933-37947610 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
335
               

               
Alignm identity:
               
227
               

               
Alignm E-value:
               
5e-36
               

               
Alignm gaps (pig, cow):
               
62, 8
               

               
Conread position:
               
121-456
               

               
Cow position:
               
chr22:13094608-13094280 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
342
               

               
Alignm identity:
               
228
               

               
Alignm E-value:
               
8e-30
               

               
Alignm gaps (pig, cow):
               
77, 8
               

               
Conread position:
               
121-457
               

               
Cow position:
               
chr22:1541119-1540789 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
352
               

               
Alignm identity:
               
242
               

               
Alignm E-value:
               
2e-28
               

               
Alignm gaps (pig, cow):
               
17, 54
               

               
Conread position:
               
121-475
               

               
Cow position:
               
chr22:17193607-17193250 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
363
               

               
Alignm identity:
               
233
               

               
Alignm E-value:
               
2e-29
               

               
Alignm gaps (pig, cow):
               
48, 98
               

               
Conread position:
               
121-475
               

               
Cow position:
               
chr22:27681938-27681578 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
367
               

               
Alignm identity:
               
257
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
17, 94
               

               
Conread position:
               
121-497
               

               
Cow position:
               
chr22:15618820-15618455 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
386
               

               
Alignm identity:
               
273
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
47, 107
               

               
Conread position:
               
121-514
               

               
Cow position:
               
chr22:6096803-6097199 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
406
               

               
Alignm identity:
               
297
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
45, 103
               

               
Conread position:
               
121-531
               

               
Cow position:
               
chr22:36432761-36433158 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
417
               

               
Alignm identity:
               
317
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
47, 15
               

               
Conread position:
               
121-548
               

               
Cow position:
               
chr22:8430103-8429677 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
437
               

               
Alignm identity:
               
286
               

               
Alignm E-value:
               
7e-40
               

               
Alignm gaps (pig, cow):
               
45, 93
               

               
Conread position:
               
121-549
               

               
Cow position:
               
chr22:23688992-23689413 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
437
               

               
Alignm identity:
               
304
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
63, 27
               

               
Conread position:
               
121-597
               

               
Cow position:
               
chr22:10295243-10294796 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
485
               

               
Alignm identity:
               
345
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
5, 90
               

               
Conread position:
               
121-601
               

               
Cow position:
               
chr22:15490867-15490401 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
487
               

               
Alignm identity:
               
357
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
58, 10
               

               
Conread position:
               
121-602
               

               
Cow position:
               
chr22:36562813-36563283 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
487
               

               
Alignm identity:
               
323
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
48, 91
               

               
Conread position:
               
121-603
               

               
Cow position:
               
chr22:10303228-10302750 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
487
               

               
Alignm identity:
               
352
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
61, 54
               

               
Conread position:
               
121-603
               

               
Cow position:
               
chr22:28665512-28665008 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
513
               

               
Alignm identity:
               
375
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
27, 14
               

               
Conread position:
               
121-604
               

               
Cow position:
               
chr22:41970947-41971415 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
490
               

               
Alignm identity:
               
343
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
61, 20
               

               
Conread position:
               
121-611
               

               
Cow position:
               
chr22:4075674-4076166 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
504
               

               
Alignm identity:
               
364
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
48, 7
               

               
Conread position:
               
121-612
               

               
Cow position:
               
chr22:1309525-1309996 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
493
               

               
Alignm identity:
               
340
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
61, 46
               

               
Conread position:
               
121-613
               

               
Cow position:
               
chr22:15567810-15568289 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
500
               

               
Alignm identity:
               
356
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
45, 10
               

               
Conread position:
               
121-614
               

               
Cow position:
               
chr22:1485079-1484591 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
505
               

               
Alignm identity:
               
339
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
48, 93
               

               
Conread position:
               
121-614
               

               
Cow position:
               
chr22:6622038-6622516 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
497
               

               
Alignm identity:
               
340
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
61, 90
               

               
Conread position:
               
121-614
               

               
Cow position:
               
chr22:12681589-12682063 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
499
               

               
Alignm identity:
               
347
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
62, 25
               

               
Conread position:
               
121-614
               

               
Cow position:
               
chr22:18025341-18025828 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
503
               

               
Alignm identity:
               
317
               

               
Alignm E-value:
               
1e-33
               

               
Alignm gaps (pig, cow):
               
48, 93
               

               
Conread position:
               
121-614
               

               
Cow position:
               
chr22:27577957-27577462 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
512
               

               
Alignm identity:
               
344
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
48, 21
               

               
Conread position:
               
121-614
               

               
Cow position:
               
chr22:40374819-40374335 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
502
               

               
Alignm identity:
               
351
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
52, 82
               

               
Conread position:
               
121-616
               

               
Cow position:
               
chr22:23249525-23249985 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
501
               

               
Alignm identity:
               
325
               

               
Alignm E-value:
               
2e-25
               

               
Alignm gaps (pig, cow):
               
173, 15
               

               
Conread position:
               
121-623
               

               
Cow position:
               
chr22:22613315-22612831 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
511
               

               
Alignm identity:
               
369
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
46, 85
               

               
Conread position:
               
121-629
               

               
Cow position:
               
chr22:14142911-14143391 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
515
               

               
Alignm identity:
               
356
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
48, 93
               

               
Conread position:
               
122-605
               

               
Cow position:
               
chr22:44717930-44717449 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
496
               

               
Alignm identity:
               
354
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
43, 14
               

               
Conread position:
               
122-626
               

               
Cow position:
               
chr22:8324462-8323964 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
518
               

               
Alignm identity:
               
364
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
21, 144
               

               
Conread position:
               
122-628
               

               
Cow position:
               
chr22:17764598-17764089 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
519
               

               
Alignm identity:
               
359
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
15, 41
               

               
Conread position:
               
123-603
               

               
Cow position:
               
chr22:19341407-19340942 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
491
               

               
Alignm identity:
               
347
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
15, 93
               

               
Conread position:
               
123-616
               

               
Cow position:
               
chr22:7154084-7153616 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
501
               

               
Alignm identity:
               
347
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
43, 18
               

               
Conread position:
               
123-645
               

               
Cow position:
               
chr22:29642322-29641809 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
531
               

               
Alignm identity:
               
377
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
50, 8
               

               
Conread position:
               
124-343
               

               
Cow position:
               
chr22:4628772-4628546 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
232
               

               
Alignm identity:
               
161
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
45, 86
               

               
Conread position:
               
124-343
               

               
Cow position:
               
chr22:10371848-10371624 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
227
               

               
Alignm identity:
               
154
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
104, 7
               

               
Conread position:
               
124-351
               

               
Cow position:
               
chr22:21484141-21483933 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
229
               

               
Alignm identity:
               
163
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
15, 7
               

               
Conread position:
               
124-352
               

               
Cow position:
               
chr22:3486553-3486788 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
242
               

               
Alignm identity:
               
176
               

               
Alignm E-value:
               
3e-30
               

               
Alignm gaps (pig, cow):
               
42, 179
               

               
Conread position:
               
124-352
               

               
Cow position:
               
chr22:26268060-26267834 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
237
               

               
Alignm identity:
               
170
               

               
Alignm E-value:
               
6e-27
               

               
Alignm gaps (pig, cow):
               
21, 90
               

               
Conread position:
               
124-359
               

               
Cow position:
               
chr22:28937732-28937955 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
240
               

               
Alignm identity:
               
170
               

               
Alignm E-value:
               
2e-25
               

               
Alignm gaps (pig, cow):
               
43, 80
               

               
Conread position:
               
124-366
               

               
Cow position:
               
chr22:14676899-14676655 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
249
               

               
Alignm identity:
               
165
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
18, 91
               

               
Conread position:
               
124-393
               

               
Cow position:
               
chr22:47525952-47525694 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
271
               

               
Alignm identity:
               
190
               

               
Alignm E-value:
               
1e-31
               

               
Alignm gaps (pig, cow):
               
123, 24
               

               
Conread position:
               
124-415
               

               
Cow position:
               
chr22:1106280-1105985 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
301
               

               
Alignm identity:
               
207
               

               
Alignm E-value:
               
4e-33
               

               
Alignm gaps (pig, cow):
               
44, 90
               

               
Conread position:
               
124-424
               

               
Cow position:
               
chr22:12749704-12749985 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
305
               

               
Alignm identity:
               
215
               

               
Alignm E-value:
               
1e-31
               

               
Alignm gaps (pig, cow):
               
58, 7
               

               
Conread position:
               
124-437
               

               
Cow position:
               
chr22:1984067-1983753 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
321
               

               
Alignm identity:
               
225
               

               
Alignm E-value:
               
2.99878e-43
               

               
Alignm gaps (pig, cow):
               
42, 247
               

               
Conread position:
               
124-493
               

               
Cow position:
               
chr22:15020208-15020557 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
377
               

               
Alignm identity:
               
260
               

               
Alignm E-value:
               
1e-34
               

               
Alignm gaps (pig, cow):
               
258, 24
               

               
Conread position:
               
124-495
               

               
Cow position:
               
chr22:10293141-10292805 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
378
               

               
Alignm identity:
               
271
               

               
Alignm E-value:
               
2e-39
               

               
Alignm gaps (pig, cow):
               
61, 41
               

               
Conread position:
               
124-519
               

               
Cow position:
               
chr22:32698973-32698579 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
405
               

               
Alignm identity:
               
294
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
43, 90
               

               
Conread position:
               
124-571
               

               
Cow position:
               
chr22:1289320-1289747 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
451
               

               
Alignm identity:
               
304
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
111, 85
               

               
Conread position:
               
124-596
               

               
Cow position:
               
chr22:16621403-16620920 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
490
               

               
Alignm identity:
               
355
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
20, 253
               

               
Conread position:
               
124-597
               

               
Cow position:
               
chr22:2470028-2470501 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
489
               

               
Alignm identity:
               
323
               

               
Alignm E-value:
               
9.94922e-44
               

               
Alignm gaps (pig, cow):
               
45, 90
               

               
Conread position:
               
124-602
               

               
Cow position:
               
chr22:1975830-1975353 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
489
               

               
Alignm identity:
               
354
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
20, 7
               

               
Conread position:
               
124-602
               

               
Cow position:
               
chr22:8733136-8733581 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
485
               

               
Alignm identity:
               
347
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
45, 90
               

               
Conread position:
               
124-605
               

               
Cow position:
               
chr22:26150906-26151380 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
491
               

               
Alignm identity:
               
340
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
45, 95
               

               
Conread position:
               
124-605
               

               
Cow position:
               
chr22:43043944-43044426 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
502
               

               
Alignm identity:
               
328
               

               
Alignm E-value:
               
4e-33
               

               
Alignm gaps (pig, cow):
               
43, 144
               

               
Conread position:
               
124-607
               

               
Cow position:
               
chr22:1326627-1326155 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
491
               

               
Alignm identity:
               
351
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
58, 7
               

               
Conread position:
               
124-613
               

               
Cow position:
               
chr22:16273851-16273364 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
497
               

               
Alignm identity:
               
329
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
61, 92
               

               
Conread position:
               
124-613
               

               
Cow position:
               
chr22:23806329-23806817 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
499
               

               
Alignm identity:
               
319
               

               
Alignm E-value:
               
2.99878e-43
               

               
Alignm gaps (pig, cow):
               
51, 7
               

               
Conread position:
               
124-614
               

               
Cow position:
               
chr22:3987732-3987241 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
500
               

               
Alignm identity:
               
349
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
45, 90
               

               
Conread position:
               
124-614
               

               
Cow position:
               
chr22:5291065-5290573 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
499
               

               
Alignm identity:
               
346
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
45, 90
               

               
Conread position:
               
124-614
               

               
Cow position:
               
chr22:23758800-23759283 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
501
               

               
Alignm identity:
               
337
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
42, 7
               

               
Conread position:
               
124-616
               

               
Cow position:
               
chr22:34616524-34616036 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
505
               

               
Alignm identity:
               
359
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
44, 5
               

               
Conread position:
               
124-642
               

               
Cow position:
               
chr22:40048767-40048265 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
526
               

               
Alignm identity:
               
366
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
44, 18
               

               
Conread position:
               
125-356
               

               
Cow position:
               
chr22:12973939-12974188 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
252
               

               
Alignm identity:
               
177
               

               
Alignm E-value:
               
1e-24
               

               
Alignm gaps (pig, cow):
               
50, 185
               

               
Conread position:
               
125-409
               

               
Cow position:
               
chr22:6176072-6176361 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
294
               

               
Alignm identity:
               
213
               

               
Alignm E-value:
               
1.00053e-42
               

               
Alignm gaps (pig, cow):
               
14, 82
               

               
Conread position:
               
125-433
               

               
Cow position:
               
chr22:25809070-25809365 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
316
               

               
Alignm identity:
               
212
               

               
Alignm E-value:
               
4e-24
               

               
Alignm gaps (pig, cow):
               
11, 86
               

               
Conread position:
               
125-483
               

               
Cow position:
               
chr22:40789762-40789424 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
362
               

               
Alignm identity:
               
272
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
49, 18
               

               
Conread position:
               
125-661
               

               
Cow position:
               
chr22:14690750-14691290 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
552
               

               
Alignm identity:
               
405
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
40, 246
               

               
Conread position:
               
126-614
               

               
Cow position:
               
chr22:644573-645031 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
491
               

               
Alignm identity:
               
354
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
166, 39
               

               
Conread position:
               
127-603
               

               
Cow position:
               
chr22:13286657-13286183 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
490
               

               
Alignm identity:
               
356
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
7, 88
               

               
Conread position:
               
128-321
               

               
Cow position:
               
chr22:43130935-43131128 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
200
               

               
Alignm identity:
               
141
               

               
Alignm E-value:
               
9e-21
               

               
Alignm gaps (pig, cow):
               
41, 87
               

               
Conread position:
               
128-332
               

               
Cow position:
               
chr22:2704505-2704302 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
210
               

               
Alignm identity:
               
146
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
41, 86
               

               
Conread position:
               
128-337
               

               
Cow position:
               
chr22:6372153-6372347 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
214
               

               
Alignm identity:
               
159
               

               
Alignm E-value:
               
4e-24
               

               
Alignm gaps (pig, cow):
               
6, 38
               

               
Conread position:
               
128-339
               

               
Cow position:
               
chr22:35578569-35578781 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
219
               

               
Alignm identity:
               
154
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
15, 87
               

               
Conread position:
               
128-361
               

               
Cow position:
               
chr22:4164186-4163954 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
240
               

               
Alignm identity:
               
171
               

               
Alignm E-value:
               
8e-30
               

               
Alignm gaps (pig, cow):
               
14, 86
               

               
Conread position:
               
128-416
               

               
Cow position:
               
chr22:13092987-13093271 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
293
               

               
Alignm identity:
               
190
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
51, 85
               

               
Conread position:
               
128-420
               

               
Cow position:
               
chr22:10286195-10285885 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
314
               

               
Alignm identity:
               
225
               

               
Alignm E-value:
               
7e-40
               

               
Alignm gaps (pig, cow):
               
48, 152
               

               
Conread position:
               
128-462
               

               
Cow position:
               
chr22:19891165-19890837 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
339
               

               
Alignm identity:
               
235
               

               
Alignm E-value:
               
9.00054e-42
               

               
Alignm gaps (pig, cow):
               
55, 82
               

               
Conread position:
               
128-537
               

               
Cow position:
               
chr22:12316014-12315617 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
417
               

               
Alignm identity:
               
320
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
18, 75
               

               
Conread position:
               
128-614
               

               
Cow position:
               
chr22:10162172-10161694 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
494
               

               
Alignm identity:
               
350
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
41, 14
               

               
Conread position:
               
128-614
               

               
Cow position:
               
chr22:22860705-22861182 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
493
               

               
Alignm identity:
               
354
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
41, 85
               

               
Conread position:
               
128-619
               

               
Cow position:
               
chr22:2623299-2623790 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
511
               

               
Alignm identity:
               
373
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
30, 125
               

               
Conread position:
               
129-365
               

               
Cow position:
               
chr22:7361770-7362005 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
242
               

               
Alignm identity:
               
170
               

               
Alignm E-value:
               
2e-28
               

               
Alignm gaps (pig, cow):
               
44, 63
               

               
Conread position:
               
129-368
               

               
Cow position:
               
chr22:27944303-27944046 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
260
               

               
Alignm identity:
               
188
               

               
Alignm E-value:
               
9e-31
               

               
Alignm gaps (pig, cow):
               
15, 111
               

               
Conread position:
               
129-440
               

               
Cow position:
               
chr22:4533663-4533976 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
322
               

               
Alignm identity:
               
209
               

               
Alignm E-value:
               
4e-23
               

               
Alignm gaps (pig, cow):
               
5, 84
               

               
Conread position:
               
129-455
               

               
Cow position:
               
chr22:617325-617004 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
330
               

               
Alignm identity:
               
219
               

               
Alignm E-value:
               
1e-32
               

               
Alignm gaps (pig, cow):
               
28, 7
               

               
Conread position:
               
129-487
               

               
Cow position:
               
chr22:22553042-22553384 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
362
               

               
Alignm identity:
               
248
               

               
Alignm E-value:
               
2e-38
               

               
Alignm gaps (pig, cow):
               
174, 46
               

               
Conread position:
               
129-500
               

               
Cow position:
               
chr22:30818414-30818049 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
383
               

               
Alignm identity:
               
270
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
40, 80
               

               
Conread position:
               
129-533
               

               
Cow position:
               
chr22:4583767-4583365 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
414
               

               
Alignm identity:
               
309
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
6, 85
               

               
Conread position:
               
129-545
               

               
Cow position:
               
chr22:27274484-27274895 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
426
               

               
Alignm identity:
               
319
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
40, 222
               

               
Conread position:
               
129-612
               

               
Cow position:
               
chr22:18926562-18926082 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
490
               

               
Alignm identity:
               
365
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
7, 83
               

               
Conread position:
               
129-613
               

               
Cow position:
               
chr22:4060743-4061209 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
490
               

               
Alignm identity:
               
353
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
40, 82
               

               
Conread position:
               
129-614
               

               
Cow position:
               
chr22:32661720-32661245 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
497
               

               
Alignm identity:
               
343
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
13, 86
               

               
Conread position:
               
129-614
               

               
Cow position:
               
chr22:37202056-37201586 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
496
               

               
Alignm identity:
               
368
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
5, 88
               

               
Conread position:
               
129-615
               

               
Cow position:
               
chr22:17949771-17950227 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
490
               

               
Alignm identity:
               
341
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
10, 37
               

               
Conread position:
               
130-355
               

               
Cow position:
               
chr22:2876593-2876817 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
232
               

               
Alignm identity:
               
167
               

               
Alignm E-value:
               
3e-30
               

               
Alignm gaps (pig, cow):
               
16, 84
               

               
Conread position:
               
130-409
               

               
Cow position:
               
chr22:22266526-22266239 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
292
               

               
Alignm identity:
               
196
               

               
Alignm E-value:
               
2e-26
               

               
Alignm gaps (pig, cow):
               
39, 229
               

               
Conread position:
               
130-546
               

               
Cow position:
               
chr22:41898244-41898652 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
424
               

               
Alignm identity:
               
294
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
12, 85
               

               
Conread position:
               
130-614
               

               
Cow position:
               
chr22:3842821-3842355 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
490
               

               
Alignm identity:
               
364
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
52, 39
               

               
Conread position:
               
131-272
               

               
Cow position:
               
chr22:11173145-11173289 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
145
               

               
Alignm identity:
               
108
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
51, 0
               

               
Conread position:
               
131-334
               

               
Cow position:
               
chr22:6106168-6106374 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
209
               

               
Alignm identity:
               
146
               

               
Alignm E-value:
               
1e-24
               

               
Alignm gaps (pig, cow):
               
34, 110
               

               
Conread position:
               
131-352
               

               
Cow position:
               
chr22:1065310-1065089 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
226
               

               
Alignm identity:
               
158
               

               
Alignm E-value:
               
6e-28
               

               
Alignm gaps (pig, cow):
               
36, 83
               

               
Conread position:
               
131-362
               

               
Cow position:
               
chr22:4736229-4735997 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
237
               

               
Alignm identity:
               
168
               

               
Alignm E-value:
               
3e-31
               

               
Alignm gaps (pig, cow):
               
36, 82
               

               
Conread position:
               
131-378
               

               
Cow position:
               
chr22:4156613-4156859 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
253
               

               
Alignm identity:
               
184
               

               
Alignm E-value:
               
2e-38
               

               
Alignm gaps (pig, cow):
               
38, 82
               

               
Conread position:
               
131-397
               

               
Cow position:
               
chr22:4310166-4310431 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
276
               

               
Alignm identity:
               
199
               

               
Alignm E-value:
               
4e-33
               

               
Alignm gaps (pig, cow):
               
40, 55
               

               
Conread position:
               
131-413
               

               
Cow position:
               
chr22:12981522-12981798 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
288
               

               
Alignm identity:
               
198
               

               
Alignm E-value:
               
9e-31
               

               
Alignm gaps (pig, cow):
               
38, 82
               

               
Conread position:
               
131-428
               

               
Cow position:
               
chr22:24336747-24336437 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
313
               

               
Alignm identity:
               
220
               

               
Alignm E-value:
               
2e-39
               

               
Alignm gaps (pig, cow):
               
38, 247
               

               
Conread position:
               
131-429
               

               
Cow position:
               
chr22:1659369-1659071 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
305
               

               
Alignm identity:
               
213
               

               
Alignm E-value:
               
2e-38
               

               
Alignm gaps (pig, cow):
               
51, 11
               

               
Conread position:
               
131-437
               

               
Cow position:
               
chr22:4208790-4209092 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
313
               

               
Alignm identity:
               
202
               

               
Alignm E-value:
               
3e-21
               

               
Alignm gaps (pig, cow):
               
38, 83
               

               
Conread position:
               
131-438
               

               
Cow position:
               
chr22:8800243-8800556 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
323
               

               
Alignm identity:
               
220
               

               
Alignm E-value:
               
2e-28
               

               
Alignm gaps (pig, cow):
               
23, 135
               

               
Conread position:
               
131-447
               

               
Cow position:
               
chr22:3282626-3282932 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
320
               

               
Alignm identity:
               
213
               

               
Alignm E-value:
               
2e-28
               

               
Alignm gaps (pig, cow):
               
161, 34
               

               
Conread position:
               
131-456
               

               
Cow position:
               
chr22:15914843-15915160 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
330
               

               
Alignm identity:
               
230
               

               
Alignm E-value:
               
7e-40
               

               
Alignm gaps (pig, cow):
               
38, 106
               

               
Conread position:
               
131-459
               

               
Cow position:
               
chr22:2123493-2123174 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
334
               

               
Alignm identity:
               
217
               

               
Alignm E-value:
               
5e-26
               

               
Alignm gaps (pig, cow):
               
38, 82
               

               
Conread position:
               
131-459
               

               
Cow position:
               
chr22:27828580-27828263 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
334
               

               
Alignm identity:
               
232
               

               
Alignm E-value:
               
6e-38
               

               
Alignm gaps (pig, cow):
               
35, 83
               

               
Conread position:
               
131-459
               

               
Cow position:
               
chr22:39602489-39602159 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
338
               

               
Alignm identity:
               
233
               

               
Alignm E-value:
               
7e-39
               

               
Alignm gaps (pig, cow):
               
17, 85
               

               
Conread position:
               
131-474
               

               
Cow position:
               
chr22:44410921-44410590 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
351
               

               
Alignm identity:
               
251
               

               
Alignm E-value:
               
9.94922e-44
               

               
Alignm gaps (pig, cow):
               
13, 85
               

               
Conread position:
               
131-491
               

               
Cow position:
               
chr22:41496182-41495823 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
371
               

               
Alignm identity:
               
233
               

               
Alignm E-value:
               
9e-21
               

               
Alignm gaps (pig, cow):
               
38, 69
               

               
Conread position:
               
131-497
               

               
Cow position:
               
chr22:15154205-15153838 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
376
               

               
Alignm identity:
               
250
               

               
Alignm E-value:
               
4e-35
               

               
Alignm gaps (pig, cow):
               
34, 83
               

               
Conread position:
               
131-498
               

               
Cow position:
               
chr22:43131351-43131708 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
374
               

               
Alignm identity:
               
277
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
35, 85
               

               
Conread position:
               
131-501
               

               
Cow position:
               
chr22:9668782-9668402 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
385
               

               
Alignm identity:
               
255
               

               
Alignm E-value:
               
2e-37
               

               
Alignm gaps (pig, cow):
               
36, 83
               

               
Conread position:
               
131-521
               

               
Cow position:
               
chr22:25764289-25764666 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
397
               

               
Alignm identity:
               
267
               

               
Alignm E-value:
               
2e-38
               

               
Alignm gaps (pig, cow):
               
45, 83
               

               
Conread position:
               
131-576
               

               
Cow position:
               
chr22:36539456-36539906 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
461
               

               
Alignm identity:
               
328
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
35, 83
               

               
Conread position:
               
131-586
               

               
Cow position:
               
chr22:15959571-15960014 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
464
               

               
Alignm identity:
               
308
               

               
Alignm E-value:
               
4.06377e-44
               

               
Alignm gaps (pig, cow):
               
42, 83
               

               
Conread position:
               
131-601
               

               
Cow position:
               
chr22:8732361-8732819 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
483
               

               
Alignm identity:
               
330
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
37, 51
               

               
Conread position:
               
131-603
               

               
Cow position:
               
chr22:14178629-14179091 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
480
               

               
Alignm identity:
               
348
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
42, 83
               

               
Conread position:
               
131-603
               

               
Cow position:
               
chr22:23804782-23805244 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
480
               

               
Alignm identity:
               
323
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
161, 44
               

               
Conread position:
               
131-604
               

               
Cow position:
               
chr22:38313271-38313725 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
482
               

               
Alignm identity:
               
328
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
37, 83
               

               
Conread position:
               
131-606
               

               
Cow position:
               
chr22:17852435-17852885 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
481
               

               
Alignm identity:
               
336
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
38, 81
               

               
Conread position:
               
131-612
               

               
Cow position:
               
chr22:10338902-10339381 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
495
               

               
Alignm identity:
               
370
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
13, 192
               

               
Conread position:
               
131-614
               

               
Cow position:
               
chr22:11613629-11613157 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
492
               

               
Alignm identity:
               
351
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
26, 84
               

               
Conread position:
               
131-614
               

               
Cow position:
               
chr22:13687912-13688383 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
498
               

               
Alignm identity:
               
335
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
36, 18
               

               
Conread position:
               
131-614
               

               
Cow position:
               
chr22:13735078-13735535 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
490
               

               
Alignm identity:
               
326
               

               
Alignm E-value:
               
3.00018e-42
               

               
Alignm gaps (pig, cow):
               
51, 38
               

               
Conread position:
               
131-614
               

               
Cow position:
               
chr22:14091018-14091502 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
498
               

               
Alignm identity:
               
330
               

               
Alignm E-value:
               
4.2039e-45
               

               
Alignm gaps (pig, cow):
               
38, 83
               

               
Conread position:
               
131-614
               

               
Cow position:
               
chr22:16044196-16044700 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
509
               

               
Alignm identity:
               
380
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
37, 142
               

               
Conread position:
               
131-614
               

               
Cow position:
               
chr22:23831133-23830661 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
489
               

               
Alignm identity:
               
312
               

               
Alignm E-value:
               
5e-37
               

               
Alignm gaps (pig, cow):
               
48, 90
               

               
Conread position:
               
131-614
               

               
Cow position:
               
chr22:27322501-27322048 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
495
               

               
Alignm identity:
               
348
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
51, 34
               

               
Conread position:
               
131-614
               

               
Cow position:
               
chr22:39472158-39472647 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
502
               

               
Alignm identity:
               
347
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
38, 83
               

               
Conread position:
               
131-615
               

               
Cow position:
               
chr22:12573408-12572931 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
493
               

               
Alignm identity:
               
356
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
35, 82
               

               
Conread position:
               
131-615
               

               
Cow position:
               
chr22:21890162-21890631 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
488
               

               
Alignm identity:
               
361
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
14, 54
               

               
Conread position:
               
131-617
               

               
Cow position:
               
chr22:23980005-23980493 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
499
               

               
Alignm identity:
               
323
               

               
Alignm E-value:
               
2.99878e-43
               

               
Alignm gaps (pig, cow):
               
38, 11
               

               
Conread position:
               
131-622
               

               
Cow position:
               
chr22:40349544-40349075 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
497
               

               
Alignm identity:
               
365
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
42, 81
               

               
Conread position:
               
131-623
               

               
Cow position:
               
chr22:34750891-34750397 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
506
               

               
Alignm identity:
               
369
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
51, 44
               

               
Conread position:
               
131-624
               

               
Cow position:
               
chr22:37145523-37145065 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
499
               

               
Alignm identity:
               
339
               

               
Alignm E-value:
               
9.80909e-45
               

               
Alignm gaps (pig, cow):
               
51, 75
               

               
Conread position:
               
131-628
               

               
Cow position:
               
chr22:8883213-8882739 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
506
               

               
Alignm identity:
               
352
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
45, 83
               

               
Conread position:
               
132-317
               

               
Cow position:
               
chr22:24890422-24890240 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
187
               

               
Alignm identity:
               
129
               

               
Alignm E-value:
               
9e-21
               

               
Alignm gaps (pig, cow):
               
159, 78
               

               
Conread position:
               
132-328
               

               
Cow position:
               
chr22:45771821-45772016 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
205
               

               
Alignm identity:
               
148
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
12, 76
               

               
Conread position:
               
132-351
               

               
Cow position:
               
chr22:7584041-7584251 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
223
               

               
Alignm identity:
               
160
               

               
Alignm E-value:
               
2e-26
               

               
Alignm gaps (pig, cow):
               
45, 80
               

               
Conread position:
               
132-361
               

               
Cow position:
               
chr22:2100747-2100971 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
235
               

               
Alignm identity:
               
165
               

               
Alignm E-value:
               
2e-25
               

               
Alignm gaps (pig, cow):
               
44, 81
               

               
Conread position:
               
132-367
               

               
Cow position:
               
chr22:42230319-42230551 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
242
               

               
Alignm identity:
               
166
               

               
Alignm E-value:
               
9e-21
               

               
Alignm gaps (pig, cow):
               
37, 82
               

               
Conread position:
               
132-371
               

               
Cow position:
               
chr22:23077275-23077527 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
253
               

               
Alignm identity:
               
175
               

               
Alignm E-value:
               
2e-27
               

               
Alignm gaps (pig, cow):
               
37, 0
               

               
Conread position:
               
132-540
               

               
Cow position:
               
chr22:12313621-12313222 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
416
               

               
Alignm identity:
               
292
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
37, 80
               

               
Conread position:
               
132-565
               

               
Cow position:
               
chr22:5616497-5616077 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
444
               

               
Alignm identity:
               
318
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
33, 17
               

               
Conread position:
               
132-597
               

               
Cow position:
               
chr22:4535120-4535580 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
473
               

               
Alignm identity:
               
340
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
50, 37
               

               
Conread position:
               
132-597
               

               
Cow position:
               
chr22:30269603-30269161 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
469
               

               
Alignm identity:
               
347
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
97, 41
               

               
Conread position:
               
132-614
               

               
Cow position:
               
chr22:10567517-10567958 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
486
               

               
Alignm identity:
               
343
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
36, 73
               

               
Conread position:
               
132-616
               

               
Cow position:
               
chr22:534691-534220 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
489
               

               
Alignm identity:
               
376
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
158, 37
               

               
Conread position:
               
132-616
               

               
Cow position:
               
chr22:27550563-27550086 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
494
               

               
Alignm identity:
               
331
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
25, 44
               

               
Conread position:
               
133-318
               

               
Cow position:
               
chr22:38815001-38815181 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
190
               

               
Alignm identity:
               
138
               

               
Alignm E-value:
               
4e-23
               

               
Alignm gaps (pig, cow):
               
49, 68
               

               
Conread position:
               
133-347
               

               
Cow position:
               
chr22:1821388-1821596 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
217
               

               
Alignm identity:
               
158
               

               
Alignm E-value:
               
8e-30
               

               
Alignm gaps (pig, cow):
               
49, 36
               

               
Conread position:
               
133-404
               

               
Cow position:
               
chr22:8302325-8302612 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
292
               

               
Alignm identity:
               
201
               

               
Alignm E-value:
               
6e-27
               

               
Alignm gaps (pig, cow):
               
34, 174
               

               
Conread position:
               
133-409
               

               
Cow position:
               
chr22:40870031-40869763 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
282
               

               
Alignm identity:
               
191
               

               
Alignm E-value:
               
1e-24
               

               
Alignm gaps (pig, cow):
               
35, 75
               

               
Conread position:
               
133-437
               

               
Cow position:
               
chr22:16541448-16541753 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
313
               

               
Alignm identity:
               
221
               

               
Alignm E-value:
               
8.00001e-41
               

               
Alignm gaps (pig, cow):
               
33, 81
               

               
Conread position:
               
133-457
               

               
Cow position:
               
chr22:22013950-22013632 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
330
               

               
Alignm identity:
               
219
               

               
Alignm E-value:
               
9e-31
               

               
Alignm gaps (pig, cow):
               
36, 80
               

               
Conread position:
               
133-459
               

               
Cow position:
               
chr22:5837462-5837147 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
333
               

               
Alignm identity:
               
243
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
36, 81
               

               
Conread position:
               
133-521
               

               
Cow position:
               
chr22:4162382-4162767 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
401
               

               
Alignm identity:
               
263
               

               
Alignm E-value:
               
9e-31
               

               
Alignm gaps (pig, cow):
               
36, 81
               

               
Conread position:
               
133-537
               

               
Cow position:
               
chr22:6327573-6327970 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
415
               

               
Alignm identity:
               
286
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
52, 106
               

               
Conread position:
               
133-597
               

               
Cow position:
               
chr22:59814-59352 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
476
               

               
Alignm identity:
               
336
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
36, 81
               

               
Conread position:
               
133-603
               

               
Cow position:
               
chr22:18196711-18196250 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
478
               

               
Alignm identity:
               
342
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
35, 79
               

               
Conread position:
               
133-614
               

               
Cow position:
               
chr22:4044124-4043662 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
488
               

               
Alignm identity:
               
329
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
37, 121
               

               
Conread position:
               
133-614
               

               
Cow position:
               
chr22:11147110-11146631 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
495
               

               
Alignm identity:
               
319
               

               
Alignm E-value:
               
2e-37
               

               
Alignm gaps (pig, cow):
               
113, 36
               

               
Conread position:
               
133-614
               

               
Cow position:
               
chr22:21568192-21567732 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
486
               

               
Alignm identity:
               
348
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
50, 42
               

               
Conread position:
               
134-289
               

               
Cow position:
               
chr22:800181-800019 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
164
               

               
Alignm identity:
               
124
               

               
Alignm E-value:
               
1e-23
               

               
Alignm gaps (pig, cow):
               
35, 129
               

               
Conread position:
               
134-449
               

               
Cow position:
               
chr22:23735812-23736122 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
321
               

               
Alignm identity:
               
227
               

               
Alignm E-value:
               
1.00053e-42
               

               
Alignm gaps (pig, cow):
               
34, 80
               

               
Conread position:
               
134-609
               

               
Cow position:
               
chr22:6720881-6721331 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
482
               

               
Alignm identity:
               
331
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
31, 80
               

               
Conread position:
               
134-614
               

               
Cow position:
               
chr22:18020830-18021292 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
488
               

               
Alignm identity:
               
332
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
10, 55
               

               
Conread position:
               
134-614
               

               
Cow position:
               
chr22:18259416-18258957 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
485
               

               
Alignm identity:
               
341
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
35, 75
               

               
Conread position:
               
134-616
               

               
Cow position:
               
chr22:28071758-28071283 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
488
               

               
Alignm identity:
               
351
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
160, 32
               

               
Conread position:
               
135-320
               

               
Cow position:
               
chr22:9735467-9735285 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
191
               

               
Alignm identity:
               
139
               

               
Alignm E-value:
               
4e-24
               

               
Alignm gaps (pig, cow):
               
31, 76
               

               
Conread position:
               
135-321
               

               
Cow position:
               
chr22:33373442-33373254 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
189
               

               
Alignm identity:
               
130
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
34, 0
               

               
Conread position:
               
135-337
               

               
Cow position:
               
chr22:35627549-35627340 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
215
               

               
Alignm identity:
               
156
               

               
Alignm E-value:
               
5e-25
               

               
Alignm gaps (pig, cow):
               
31, 79
               

               
Conread position:
               
135-358
               

               
Cow position:
               
chr22:24802491-24802722 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
233
               

               
Alignm identity:
               
170
               

               
Alignm E-value:
               
1e-32
               

               
Alignm gaps (pig, cow):
               
34, 113
               

               
Conread position:
               
135-363
               

               
Cow position:
               
chr22:26112566-26112339 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
234
               

               
Alignm identity:
               
163
               

               
Alignm E-value:
               
2e-25
               

               
Alignm gaps (pig, cow):
               
34, 84
               

               
Conread position:
               
135-370
               

               
Cow position:
               
chr22:26804021-26803783 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
243
               

               
Alignm identity:
               
162
               

               
Alignm E-value:
               
3e-21
               

               
Alignm gaps (pig, cow):
               
31, 67
               

               
Conread position:
               
135-402
               

               
Cow position:
               
chr22:15737429-15737168 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
271
               

               
Alignm identity:
               
185
               

               
Alignm E-value:
               
8e-30
               

               
Alignm gaps (pig, cow):
               
47, 76
               

               
Conread position:
               
135-435
               

               
Cow position:
               
chr22:25254373-25254078 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
307
               

               
Alignm identity:
               
216
               

               
Alignm E-value:
               
2e-37
               

               
Alignm gaps (pig, cow):
               
33, 77
               

               
Conread position:
               
135-493
               

               
Cow position:
               
chr22:1563041-1563405 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
372
               

               
Alignm identity:
               
256
               

               
Alignm E-value:
               
4.06377e-44
               

               
Alignm gaps (pig, cow):
               
32, 181
               

               
Conread position:
               
135-499
               

               
Cow position:
               
chr22:33399290-33399642 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
371
               

               
Alignm identity:
               
271
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
31, 80
               

               
Conread position:
               
135-563
               

               
Cow position:
               
chr22:6149189-6149606 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
436
               

               
Alignm identity:
               
305
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
35, 79
               

               
Conread position:
               
135-614
               

               
Cow position:
               
chr22:34441434-34441906 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
493
               

               
Alignm identity:
               
348
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
34, 14
               

               
Conread position:
               
135-626
               

               
Cow position:
               
chr22:3301137-3301606 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
499
               

               
Alignm identity:
               
342
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
34, 79
               

               
Conread position:
               
136-338
               

               
Cow position:
               
chr22:45683836-45684040 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
206
               

               
Alignm identity:
               
143
               

               
Alignm E-value:
               
5e-25
               

               
Alignm gaps (pig, cow):
               
40, 195
               

               
Conread position:
               
136-352
               

               
Cow position:
               
chr22:26233831-26233617 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
222
               

               
Alignm identity:
               
157
               

               
Alignm E-value:
               
2e-25
               

               
Alignm gaps (pig, cow):
               
33, 81
               

               
Conread position:
               
136-358
               

               
Cow position:
               
chr22:12996611-12996830 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
227
               

               
Alignm identity:
               
164
               

               
Alignm E-value:
               
3e-30
               

               
Alignm gaps (pig, cow):
               
84, 39
               

               
Conread position:
               
136-361
               

               
Cow position:
               
chr22:1714664-1714890 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
232
               

               
Alignm identity:
               
158
               

               
Alignm E-value:
               
3e-22
               

               
Alignm gaps (pig, cow):
               
29, 77
               

               
Conread position:
               
136-361
               

               
Cow position:
               
chr22:16806785-16806570 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
231
               

               
Alignm identity:
               
166
               

               
Alignm E-value:
               
5e-26
               

               
Alignm gaps (pig, cow):
               
32, 70
               

               
Conread position:
               
136-367
               

               
Cow position:
               
chr22:11352248-11352483 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
238
               

               
Alignm identity:
               
177
               

               
Alignm E-value:
               
2e-39
               

               
Alignm gaps (pig, cow):
               
32, 72
               

               
Conread position:
               
136-411
               

               
Cow position:
               
chr22:26056669-26056943 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
282
               

               
Alignm identity:
               
190
               

               
Alignm E-value:
               
6e-28
               

               
Alignm gaps (pig, cow):
               
34, 84
               

               
Conread position:
               
136-413
               

               
Cow position:
               
chr22:12157651-12157918 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
282
               

               
Alignm identity:
               
196
               

               
Alignm E-value:
               
3e-30
               

               
Alignm gaps (pig, cow):
               
46, 75
               

               
Conread position:
               
136-415
               

               
Cow position:
               
chr22:42618193-42617921 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
282
               

               
Alignm identity:
               
198
               

               
Alignm E-value:
               
6e-38
               

               
Alignm gaps (pig, cow):
               
46, 75
               

               
Conread position:
               
136-457
               

               
Cow position:
               
chr22:37030326-37030640 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
326
               

               
Alignm identity:
               
215
               

               
Alignm E-value:
               
2e-27
               

               
Alignm gaps (pig, cow):
               
112, 29
               

               
Conread position:
               
136-467
               

               
Cow position:
               
chr22:1350025-1349696 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
343
               

               
Alignm identity:
               
223
               

               
Alignm E-value:
               
4e-23
               

               
Alignm gaps (pig, cow):
               
46, 28
               

               
Conread position:
               
136-482
               

               
Cow position:
               
chr22:16094708-16095045 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
353
               

               
Alignm identity:
               
247
               

               
Alignm E-value:
               
1.00053e-42
               

               
Alignm gaps (pig, cow):
               
32, 75
               

               
Conread position:
               
136-512
               

               
Cow position:
               
chr22:16823315-16822929 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
392
               

               
Alignm identity:
               
275
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
33, 147
               

               
Conread position:
               
136-537
               

               
Cow position:
               
chr22:4373232-4372847 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
405
               

               
Alignm identity:
               
283
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
46, 100
               

               
Conread position:
               
136-540
               

               
Cow position:
               
chr22:3534129-3533749 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
410
               

               
Alignm identity:
               
291
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
29, 63
               

               
Conread position:
               
136-575
               

               
Cow position:
               
chr22:26166420-26166848 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
446
               

               
Alignm identity:
               
305
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
46, 160
               

               
Conread position:
               
136-582
               

               
Cow position:
               
chr22:43812243-43812657 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
448
               

               
Alignm identity:
               
324
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
308, 49
               

               
Conread position:
               
136-593
               

               
Cow position:
               
chr22:39696495-39696046 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
476
               

               
Alignm identity:
               
323
               

               
Alignm E-value:
               
3.00018e-42
               

               
Alignm gaps (pig, cow):
               
156, 33
               

               
Conread position:
               
136-606
               

               
Cow position:
               
chr22:28146875-28146421 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
480
               

               
Alignm identity:
               
336
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
40, 15
               

               
Conread position:
               
136-613
               

               
Cow position:
               
chr22:38438960-38439428 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
481
               

               
Alignm identity:
               
349
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
49, 75
               

               
Conread position:
               
136-614
               

               
Cow position:
               
chr22:26316670-26316208 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
495
               

               
Alignm identity:
               
342
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
46, 208
               

               
Conread position:
               
136-616
               

               
Cow position:
               
chr22:16251367-16251836 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
486
               

               
Alignm identity:
               
353
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
32, 160
               

               
Conread position:
               
136-622
               

               
Cow position:
               
chr22:26339962-26339480 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
496
               

               
Alignm identity:
               
369
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
37, 235
               

               
Conread position:
               
137-359
               

               
Cow position:
               
chr22:19413837-19414060 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
229
               

               
Alignm identity:
               
159
               

               
Alignm E-value:
               
1e-24
               

               
Alignm gaps (pig, cow):
               
32, 77
               

               
Conread position:
               
137-361
               

               
Cow position:
               
chr22:47562908-47562678 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
232
               

               
Alignm identity:
               
164
               

               
Alignm E-value:
               
8e-30
               

               
Alignm gaps (pig, cow):
               
30, 94
               

               
Conread position:
               
137-367
               

               
Cow position:
               
chr22:25732766-25733000 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
239
               

               
Alignm identity:
               
164
               

               
Alignm E-value:
               
1e-23
               

               
Alignm gaps (pig, cow):
               
45, 31
               

               
Conread position:
               
137-415
               

               
Cow position:
               
chr22:7140845-7140565 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
285
               

               
Alignm identity:
               
201
               

               
Alignm E-value:
               
7e-39
               

               
Alignm gaps (pig, cow):
               
29, 78
               

               
Conread position:
               
137-415
               

               
Cow position:
               
chr22:7832152-7832423 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
284
               

               
Alignm identity:
               
200
               

               
Alignm E-value:
               
1e-34
               

               
Alignm gaps (pig, cow):
               
45, 69
               

               
Conread position:
               
137-421
               

               
Cow position:
               
chr22:30607056-30606781 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
290
               

               
Alignm identity:
               
200
               

               
Alignm E-value:
               
2e-29
               

               
Alignm gaps (pig, cow):
               
32, 77
               

               
Conread position:
               
137-444
               

               
Cow position:
               
chr22:13222322-13222006 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
324
               

               
Alignm identity:
               
227
               

               
Alignm E-value:
               
2e-37
               

               
Alignm gaps (pig, cow):
               
74, 26
               

               
Conread position:
               
137-484
               

               
Cow position:
               
chr22:24916027-24915691 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
352
               

               
Alignm identity:
               
216
               

               
Alignm E-value:
               
6e-38
               

               
Alignm gaps (pig, cow):
               
45, 28
               

               
Conread position:
               
137-485
               

               
Cow position:
               
chr22:1035624-1035965 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
357
               

               
Alignm identity:
               
239
               

               
Alignm E-value:
               
8e-30
               

               
Alignm gaps (pig, cow):
               
155, 43
               

               
Conread position:
               
137-486
               

               
Cow position:
               
chr22:15668285-15668622 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
359
               

               
Alignm identity:
               
261
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
9, 71
               

               
Conread position:
               
137-510
               

               
Cow position:
               
chr22:8090338-8090701 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
380
               

               
Alignm identity:
               
273
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
28, 77
               

               
Conread position:
               
137-582
               

               
Cow position:
               
chr22:37139625-37139208 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
451
               

               
Alignm identity:
               
300
               

               
Alignm E-value:
               
1e-33
               

               
Alignm gaps (pig, cow):
               
45, 101
               

               
Conread position:
               
137-586
               

               
Cow position:
               
chr22:28357224-28356792 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
452
               

               
Alignm identity:
               
328
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
45, 72
               

               
Conread position:
               
137-590
               

               
Cow position:
               
chr22:4993719-4994168 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
464
               

               
Alignm identity:
               
313
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
45, 38
               

               
Conread position:
               
137-605
               

               
Cow position:
               
chr22:16533269-16532816 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
474
               

               
Alignm identity:
               
344
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
45, 74
               

               
Conread position:
               
137-609
               

               
Cow position:
               
chr22:3250783-3251255 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
486
               

               
Alignm identity:
               
353
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
31, 108
               

               
Conread position:
               
137-610
               

               
Cow position:
               
chr22:22023101-22022619 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
494
               

               
Alignm identity:
               
343
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
32, 77
               

               
Conread position:
               
137-613
               

               
Cow position:
               
chr22:25205767-25206239 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
487
               

               
Alignm identity:
               
341
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
14, 79
               

               
Conread position:
               
137-613
               

               
Cow position:
               
chr22:36560453-36560926 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
485
               

               
Alignm identity:
               
326
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
30, 155
               

               
Conread position:
               
138-325
               

               
Cow position:
               
chr22:31064610-31064414 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
198
               

               
Alignm identity:
               
141
               

               
Alignm E-value:
               
4e-23
               

               
Alignm gaps (pig, cow):
               
38, 12
               

               
Conread position:
               
138-331
               

               
Cow position:
               
chr22:33031005-33030803 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
203
               

               
Alignm identity:
               
144
               

               
Alignm E-value:
               
1e-24
               

               
Alignm gaps (pig, cow):
               
31, 0
               

               
Conread position:
               
138-336
               

               
Cow position:
               
chr22:26189068-26188870 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
205
               

               
Alignm identity:
               
151
               

               
Alignm E-value:
               
7e-29
               

               
Alignm gaps (pig, cow):
               
31, 76
               

               
Conread position:
               
138-351
               

               
Cow position:
               
chr22:16813991-16813783 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
218
               

               
Alignm identity:
               
160
               

               
Alignm E-value:
               
3e-31
               

               
Alignm gaps (pig, cow):
               
31, 73
               

               
Conread position:
               
138-352
               

               
Cow position:
               
chr22:30615927-30615714 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
218
               

               
Alignm identity:
               
147
               

               
Alignm E-value:
               
3e-21
               

               
Alignm gaps (pig, cow):
               
31, 74
               

               
Conread position:
               
138-356
               

               
Cow position:
               
chr22:21905664-21905452 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
220
               

               
Alignm identity:
               
151
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
153, 47
               

               
Conread position:
               
138-356
               

               
Cow position:
               
chr22:24542560-24542342 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
226
               

               
Alignm identity:
               
159
               

               
Alignm E-value:
               
4e-24
               

               
Alignm gaps (pig, cow):
               
31, 135
               

               
Conread position:
               
138-361
               

               
Cow position:
               
chr22:24134127-24134348 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
229
               

               
Alignm identity:
               
167
               

               
Alignm E-value:
               
3e-32
               

               
Alignm gaps (pig, cow):
               
28, 76
               

               
Conread position:
               
138-371
               

               
Cow position:
               
chr22:33985611-33985837 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
241
               

               
Alignm identity:
               
173
               

               
Alignm E-value:
               
2e-27
               

               
Alignm gaps (pig, cow):
               
30, 72
               

               
Conread position:
               
138-462
               

               
Cow position:
               
chr22:12830250-12830567 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
331
               

               
Alignm identity:
               
222
               

               
Alignm E-value:
               
8e-30
               

               
Alignm gaps (pig, cow):
               
44, 73
               

               
Conread position:
               
138-498
               

               
Cow position:
               
chr22:3316289-3315954 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
361
               

               
Alignm identity:
               
243
               

               
Alignm E-value:
               
3e-32
               

               
Alignm gaps (pig, cow):
               
31, 0
               

               
Conread position:
               
138-603
               

               
Cow position:
               
chr22:25247105-25246650 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
480
               

               
Alignm identity:
               
337
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
31, 76
               

               
Conread position:
               
138-604
               

               
Cow position:
               
chr22:13957449-13957911 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
478
               

               
Alignm identity:
               
347
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
32, 77
               

               
Conread position:
               
138-604
               

               
Cow position:
               
chr22:23180850-23181295 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
472
               

               
Alignm identity:
               
323
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
29, 54
               

               
Conread position:
               
138-605
               

               
Cow position:
               
chr22:4357279-4356837 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
473
               

               
Alignm identity:
               
325
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
44, 68
               

               
Conread position:
               
138-607
               

               
Cow position:
               
chr22:6215361-6215818 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
473
               

               
Alignm identity:
               
332
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
154, 48
               

               
Conread position:
               
138-613
               

               
Cow position:
               
chr22:4563552-4563092 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
479
               

               
Alignm identity:
               
338
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
154, 39
               

               
Conread position:
               
138-613
               

               
Cow position:
               
chr22:6709594-6710045 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
481
               

               
Alignm identity:
               
335
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
31, 78
               

               
Conread position:
               
138-614
               

               
Cow position:
               
chr22:34475791-34476271 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
494
               

               
Alignm identity:
               
343
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
31, 379
               

               
Conread position:
               
138-615
               

               
Cow position:
               
chr22:28371127-28370674 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
483
               

               
Alignm identity:
               
338
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
31, 73
               

               
Conread position:
               
138-616
               

               
Cow position:
               
chr22:6610162-6610625 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
489
               

               
Alignm identity:
               
352
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
31, 65
               

               
Conread position:
               
138-616
               

               
Cow position:
               
chr22:31870059-31870520 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
491
               

               
Alignm identity:
               
333
               

               
Alignm E-value:
               
1.4013e-45
               

               
Alignm gaps (pig, cow):
               
31, 76
               

               
Conread position:
               
138-619
               

               
Cow position:
               
chr22:11131065-11130600 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
487
               

               
Alignm identity:
               
361
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
31, 76
               

               
Conread position:
               
138-621
               

               
Cow position:
               
chr22:6494371-6493896 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
496
               

               
Alignm identity:
               
350
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
31, 218
               

               
Conread position:
               
139-331
               

               
Cow position:
               
chr22:7518749-7518560 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
198
               

               
Alignm identity:
               
139
               

               
Alignm E-value:
               
9e-21
               

               
Alignm gaps (pig, cow):
               
29, 72
               

               
Conread position:
               
139-365
               

               
Cow position:
               
chr22:12902661-12902876 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
231
               

               
Alignm identity:
               
166
               

               
Alignm E-value:
               
6e-27
               

               
Alignm gaps (pig, cow):
               
30, 75
               

               
Conread position:
               
139-370
               

               
Cow position:
               
chr22:18966966-18967192 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
235
               

               
Alignm identity:
               
175
               

               
Alignm E-value:
               
5e-37
               

               
Alignm gaps (pig, cow):
               
31, 51
               

               
Conread position:
               
139-454
               

               
Cow position:
               
chr22:12829414-12829727 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
328
               

               
Alignm identity:
               
238
               

               
Alignm E-value:
               
3.00004e-41
               

               
Alignm gaps (pig, cow):
               
9, 64
               

               
Conread position:
               
139-607
               

               
Cow position:
               
chr22:8418659-8418204 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
475
               

               
Alignm identity:
               
318
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
29, 75
               

               
Conread position:
               
139-613
               

               
Cow position:
               
chr22:890962-891409 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
479
               

               
Alignm identity:
               
326
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
37, 74
               

               
Conread position:
               
139-614
               

               
Cow position:
               
chr22:8412725-8412253 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
483
               

               
Alignm identity:
               
355
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
30, 75
               

               
Conread position:
               
139-625
               

               
Cow position:
               
chr22:35753092-35753589 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
511
               

               
Alignm identity:
               
359
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
16, 23
               

               
Conread position:
               
140-341
               

               
Cow position:
               
chr22:6359999-6360189 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
203
               

               
Alignm identity:
               
149
               

               
Alignm E-value:
               
2e-26
               

               
Alignm gaps (pig, cow):
               
152, 25
               

               
Conread position:
               
140-367
               

               
Cow position:
               
chr22:1776257-1776028 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
234
               

               
Alignm identity:
               
164
               

               
Alignm E-value:
               
6e-28
               

               
Alignm gaps (pig, cow):
               
34, 74
               

               
Conread position:
               
140-414
               

               
Cow position:
               
chr22:1588489-1588217 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
281
               

               
Alignm identity:
               
196
               

               
Alignm E-value:
               
1e-32
               

               
Alignm gaps (pig, cow):
               
29, 74
               

               
Conread position:
               
140-590
               

               
Cow position:
               
chr22:24583878-24584290 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
455
               

               
Alignm identity:
               
312
               

               
Alignm E-value:
               
2e-37
               

               
Alignm gaps (pig, cow):
               
29, 74
               

               
Conread position:
               
140-590
               

               
Cow position:
               
chr22:25221709-25222148 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
457
               

               
Alignm identity:
               
357
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
29, 69
               

               
Conread position:
               
140-596
               

               
Cow position:
               
chr22:40120679-40121132 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
470
               

               
Alignm identity:
               
345
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
28, 121
               

               
Conread position:
               
140-603
               

               
Cow position:
               
chr22:32892890-32892440 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
468
               

               
Alignm identity:
               
344
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
43, 75
               

               
Conread position:
               
140-614
               

               
Cow position:
               
chr22:34726869-34726403 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
488
               

               
Alignm identity:
               
354
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
42, 137
               

               
Conread position:
               
140-623
               

               
Cow position:
               
chr22:31195250-31194792 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
486
               

               
Alignm identity:
               
331
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
151, 42
               

               
Conread position:
               
141-351
               

               
Cow position:
               
chr22:8710155-8710388 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
234
               

               
Alignm identity:
               
171
               

               
Alignm E-value:
               
6e-27
               

               
Alignm gaps (pig, cow):
               
41, 0
               

               
Conread position:
               
141-361
               

               
Cow position:
               
chr22:17198331-17198113 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
225
               

               
Alignm identity:
               
160
               

               
Alignm E-value:
               
6e-28
               

               
Alignm gaps (pig, cow):
               
41, 70
               

               
Conread position:
               
141-513
               

               
Cow position:
               
chr22:32480274-32480654 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
389
               

               
Alignm identity:
               
280
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
20, 74
               

               
Conread position:
               
142-345
               

               
Cow position:
               
chr22:1523414-1523209 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
209
               

               
Alignm identity:
               
147
               

               
Alignm E-value:
               
4e-24
               

               
Alignm gaps (pig, cow):
               
27, 94
               

               
Conread position:
               
142-366
               

               
Cow position:
               
chr22:16845201-16845434 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
234
               

               
Alignm identity:
               
165
               

               
Alignm E-value:
               
8e-30
               

               
Alignm gaps (pig, cow):
               
27, 0
               

               
Conread position:
               
142-389
               

               
Cow position:
               
chr22:23675781-23676017 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
254
               

               
Alignm identity:
               
178
               

               
Alignm E-value:
               
1e-24
               

               
Alignm gaps (pig, cow):
               
27, 65
               

               
Conread position:
               
142-418
               

               
Cow position:
               
chr22:8287372-8287111 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
281
               

               
Alignm identity:
               
190
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
27, 72
               

               
Conread position:
               
142-454
               

               
Cow position:
               
chr22:12892169-12892482 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
320
               

               
Alignm identity:
               
224
               

               
Alignm E-value:
               
9.00054e-42
               

               
Alignm gaps (pig, cow):
               
31, 78
               

               
Conread position:
               
142-492
               

               
Cow position:
               
chr22:31510171-31510522 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
366
               

               
Alignm identity:
               
257
               

               
Alignm E-value:
               
3.00018e-42
               

               
Alignm gaps (pig, cow):
               
40, 240
               

               
Conread position:
               
142-544
               

               
Cow position:
               
chr22:27047204-27047601 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
418
               

               
Alignm identity:
               
297
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
27, 163
               

               
Conread position:
               
142-614
               

               
Cow position:
               
chr22:21012577-21012119 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
476
               

               
Alignm identity:
               
347
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
35, 27
               

               
Conread position:
               
143-359
               

               
Cow position:
               
chr22:16724497-16724710 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
223
               

               
Alignm identity:
               
158
               

               
Alignm E-value:
               
1e-23
               

               
Alignm gaps (pig, cow):
               
22, 35
               

               
Conread position:
               
143-365
               

               
Cow position:
               
chr22:17129194-17128982 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
225
               

               
Alignm identity:
               
164
               

               
Alignm E-value:
               
3e-31
               

               
Alignm gaps (pig, cow):
               
39, 58
               

               
Conread position:
               
143-486
               

               
Cow position:
               
chr22:530387-530726 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
359
               

               
Alignm identity:
               
260
               

               
Alignm E-value:
               
2.99878e-43
               

               
Alignm gaps (pig, cow):
               
26, 63
               

               
Conread position:
               
143-578
               

               
Cow position:
               
chr22:14245247-14245660 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
446
               

               
Alignm identity:
               
306
               

               
Alignm E-value:
               
2.99878e-43
               

               
Alignm gaps (pig, cow):
               
24, 137
               

               
Conread position:
               
143-614
               

               
Cow position:
               
chr22:766107-766551 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
478
               

               
Alignm identity:
               
313
               

               
Alignm E-value:
               
1e-33
               

               
Alignm gaps (pig, cow):
               
24, 88
               

               
Conread position:
               
144-425
               

               
Cow position:
               
chr22:26123098-26122810 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
291
               

               
Alignm identity:
               
205
               

               
Alignm E-value:
               
2e-37
               

               
Alignm gaps (pig, cow):
               
28, 232
               

               
Conread position:
               
144-460
               

               
Cow position:
               
chr22:31599622-31599328 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
322
               

               
Alignm identity:
               
234
               

               
Alignm E-value:
               
6e-38
               

               
Alignm gaps (pig, cow):
               
25, 57
               

               
Conread position:
               
144-517
               

               
Cow position:
               
chr22:1849265-1848885 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
387
               

               
Alignm identity:
               
282
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
25, 68
               

               
Conread position:
               
144-521
               

               
Cow position:
               
chr22:12389292-12388909 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
392
               

               
Alignm identity:
               
293
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
25, 70
               

               
Conread position:
               
144-597
               

               
Cow position:
               
chr22:4989978-4990425 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
459
               

               
Alignm identity:
               
302
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
23, 70
               

               
Conread position:
               
144-617
               

               
Cow position:
               
chr22:10609548-10609056 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
501
               

               
Alignm identity:
               
348
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
26, 69
               

               
Conread position:
               
145-389
               

               
Cow position:
               
chr22:44384303-44384548 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
255
               

               
Alignm identity:
               
183
               

               
Alignm E-value:
               
3e-30
               

               
Alignm gaps (pig, cow):
               
21, 154
               

               
Conread position:
               
146-331
               

               
Cow position:
               
chr22:18145723-18145543 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
191
               

               
Alignm identity:
               
140
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
23, 66
               

               
Conread position:
               
146-481
               

               
Cow position:
               
chr22:27267742-27267397 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
350
               

               
Alignm identity:
               
231
               

               
Alignm E-value:
               
8e-30
               

               
Alignm gaps (pig, cow):
               
23, 69
               

               
Conread position:
               
147-479
               

               
Cow position:
               
chr22:21325549-21325875 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
340
               

               
Alignm identity:
               
228
               

               
Alignm E-value:
               
3e-30
               

               
Alignm gaps (pig, cow):
               
22, 51
               

               
Conread position:
               
147-623
               

               
Cow position:
               
chr22:46610590-46611061 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
486
               

               
Alignm identity:
               
333
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
22, 67
               

               
Conread position:
               
148-614
               

               
Cow position:
               
chr22:13669981-13670441 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
480
               

               
Alignm identity:
               
330
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
20, 67
               

               
Conread position:
               
148-626
               

               
Cow position:
               
chr22:14365767-14366238 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
488
               

               
Alignm identity:
               
340
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
21, 6
               

               
Conread position:
               
150-544
               

               
Cow position:
               
chr22:14378508-14378885 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
400
               

               
Alignm identity:
               
290
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
18, 65
               

               
Conread position:
               
150-614
               

               
Cow position:
               
chr22:10631572-10631104 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
480
               

               
Alignm identity:
               
341
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
18, 45
               

               
Conread position:
               
152-607
               

               
Cow position:
               
chr22:45513342-45513784 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
464
               

               
Alignm identity:
               
323
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
17, 66
               

               
Conread position:
               
155-374
               

               
Cow position:
               
chr22:30642954-30643170 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
222
               

               
Alignm identity:
               
156
               

               
Alignm E-value:
               
2e-28
               

               
Alignm gaps (pig, cow):
               
27, 62
               

               
Conread position:
               
155-415
               

               
Cow position:
               
chr22:1026082-1025810 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
275
               

               
Alignm identity:
               
195
               

               
Alignm E-value:
               
4e-34
               

               
Alignm gaps (pig, cow):
               
12, 217
               

               
Conread position:
               
155-416
               

               
Cow position:
               
chr22:9171581-9171327 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
264
               

               
Alignm identity:
               
183
               

               
Alignm E-value:
               
3e-31
               

               
Alignm gaps (pig, cow):
               
136, 27
               

               
Conread position:
               
155-623
               

               
Cow position:
               
chr22:28057863-28058321 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
477
               

               
Alignm identity:
               
352
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
14, 225
               

               
Conread position:
               
157-347
               

               
Cow position:
               
chr22:8331178-8330987 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
196
               

               
Alignm identity:
               
138
               

               
Alignm E-value:
               
3e-22
               

               
Alignm gaps (pig, cow):
               
12, 57
               

               
Conread position:
               
157-365
               

               
Cow position:
               
chr22:976920-977135 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
223
               

               
Alignm identity:
               
164
               

               
Alignm E-value:
               
6e-27
               

               
Alignm gaps (pig, cow):
               
12, 35
               

               
Conread position:
               
161-603
               

               
Cow position:
               
chr22:32188679-32189099 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
445
               

               
Alignm identity:
               
309
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
130, 37
               

               
Conread position:
               
161-603
               

               
Cow position:
               
chr22:41829065-41829493 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
448
               

               
Alignm identity:
               
307
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
21, 89
               

               
Conread position:
               
165-355
               

               
Cow position:
               
chr22:3240077-3239893 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
193
               

               
Alignm identity:
               
143
               

               
Alignm E-value:
               
2e-26
               

               
Alignm gaps (pig, cow):
               
38, 23
               

               
Conread position:
               
165-420
               

               
Cow position:
               
chr22:27907710-27907956 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
258
               

               
Alignm identity:
               
173
               

               
Alignm E-value:
               
3e-22
               

               
Alignm gaps (pig, cow):
               
81, 15
               

               
Conread position:
               
165-537
               

               
Cow position:
               
chr22:15024943-15025298 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
375
               

               
Alignm identity:
               
278
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
17, 45
               

               
Conread position:
               
165-614
               

               
Cow position:
               
chr22:30515435-30514984 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
461
               

               
Alignm identity:
               
331
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
17, 77
               

               
Conread position:
               
167-616
               

               
Cow position:
               
chr22:24509495-24509933 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
464
               

               
Alignm identity:
               
319
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
15, 8
               

               
Conread position:
               
169-459
               

               
Cow position:
               
chr22:43237245-43237528 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
293
               

               
Alignm identity:
               
224
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
13, 43
               

               
Conread position:
               
179-438
               

               
Cow position:
               
chr22:34104513-34104775 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
264
               

               
Alignm identity:
               
183
               

               
Alignm E-value:
               
4e-35
               

               
Alignm gaps (pig, cow):
               
15, 197
               

               
Conread position:
               
180-410
               

               
Cow position:
               
chr22:13878331-13878112 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
231
               

               
Alignm identity:
               
171
               

               
Alignm E-value:
               
4e-35
               

               
Alignm gaps (pig, cow):
               
17, 0
               

               
Conread position:
               
185-432
               

               
Cow position:
               
chr22:4315779-4315534 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
251
               

               
Alignm identity:
               
177
               

               
Alignm E-value:
               
4e-33
               

               
Alignm gaps (pig, cow):
               
106, 39
               

               
Conread position:
               
191-458
               

               
Cow position:
               
chr22:1911810-1911550 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
270
               

               
Alignm identity:
               
189
               

               
Alignm E-value:
               
1e-33
               

               
Alignm gaps (pig, cow):
               
27, 17
               

               
Conread position:
               
191-581
               

               
Cow position:
               
chr22:22223329-22222954 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
392
               

               
Alignm identity:
               
273
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
101, 26
               

               
Conread position:
               
191-615
               

               
Cow position:
               
chr22:23176291-23176723 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
440
               

               
Alignm identity:
               
328
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
14, 181
               

               
Conread position:
               
192-432
               

               
Cow position:
               
chr22:25846179-25846416 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
244
               

               
Alignm identity:
               
164
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
54, 17
               

               
Conread position:
               
193-361
               

               
Cow position:
               
chr22:14647226-14647058 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
170
               

               
Alignm identity:
               
119
               

               
Alignm E-value:
               
3e-21
               

               
Alignm gaps (pig, cow):
               
98, 54
               

               
Conread position:
               
193-410
               

               
Cow position:
               
chr22:28704328-28704112 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
219
               

               
Alignm identity:
               
160
               

               
Alignm E-value:
               
5e-36
               

               
Alignm gaps (pig, cow):
               
99, 171
               

               
Conread position:
               
193-509
               

               
Cow position:
               
chr22:26969930-26969611 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
327
               

               
Alignm identity:
               
241
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
57, 17
               

               
Conread position:
               
193-597
               

               
Cow position:
               
chr22:26659184-26658801 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
405
               

               
Alignm identity:
               
306
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
22, 0
               

               
Conread position:
               
193-601
               

               
Cow position:
               
chr22:37324687-37324289 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
413
               

               
Alignm identity:
               
307
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
33, 83
               

               
Conread position:
               
194-434
               

               
Cow position:
               
chr22:14509334-14509562 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
243
               

               
Alignm identity:
               
168
               

               
Alignm E-value:
               
4e-24
               

               
Alignm gaps (pig, cow):
               
32, 13
               

               
Conread position:
               
196-602
               

               
Cow position:
               
chr22:17814372-17813969 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
415
               

               
Alignm identity:
               
308
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
96, 20
               

               
Conread position:
               
196-607
               

               
Cow position:
               
chr22:13841277-13840878 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
420
               

               
Alignm identity:
               
313
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
100, 18
               

               
Conread position:
               
197-318
               

               
Cow position:
               
chr22:41682288-41682410 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
123
               

               
Alignm identity:
               
94
               

               
Alignm E-value:
               
9e-21
               

               
Alignm gaps (pig, cow):
               
94, 0
               

               
Conread position:
               
197-337
               

               
Cow position:
               
chr22:3997891-3997752 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
142
               

               
Alignm identity:
               
107
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
94, 30
               

               
Conread position:
               
197-345
               

               
Cow position:
               
chr22:22606368-22606216 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
153
               

               
Alignm identity:
               
115
               

               
Alignm E-value:
               
4e-24
               

               
Alignm gaps (pig, cow):
               
16, 0
               

               
Conread position:
               
197-361
               

               
Cow position:
               
chr22:1977889-1977724 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
166
               

               
Alignm identity:
               
121
               

               
Alignm E-value:
               
5e-26
               

               
Alignm gaps (pig, cow):
               
94, 0
               

               
Conread position:
               
197-416
               

               
Cow position:
               
chr22:10533732-10533515 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
223
               

               
Alignm identity:
               
168
               

               
Alignm E-value:
               
2e-37
               

               
Alignm gaps (pig, cow):
               
165, 18
               

               
Conread position:
               
197-537
               

               
Cow position:
               
chr22:21530219-21530545 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
344
               

               
Alignm identity:
               
250
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
95, 164
               

               
Conread position:
               
197-598
               

               
Cow position:
               
chr22:3965326-3964930 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
403
               

               
Alignm identity:
               
300
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
95, 167
               

               
Conread position:
               
197-614
               

               
Cow position:
               
chr22:3950392-3949970 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
426
               

               
Alignm identity:
               
321
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
129, 178
               

               
Conread position:
               
199-392
               

               
Cow position:
               
chr22:14140128-14139931 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
198
               

               
Alignm identity:
               
135
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
13, 0
               

               
Conread position:
               
200-330
               

               
Cow position:
               
chr22:31309021-31308890 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
132
               

               
Alignm identity:
               
103
               

               
Alignm E-value:
               
5e-25
               

               
Alignm gaps (pig, cow):
               
91, 0
               

               
Conread position:
               
200-361
               

               
Cow position:
               
chr22:6326584-6326419 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
166
               

               
Alignm identity:
               
124
               

               
Alignm E-value:
               
2e-26
               

               
Alignm gaps (pig, cow):
               
12, 0
               

               
Conread position:
               
200-363
               

               
Cow position:
               
chr22:21235296-21235458 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
165
               

               
Alignm identity:
               
118
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
92, 10
               

               
Conread position:
               
200-382
               

               
Cow position:
               
chr22:24032078-24032265 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
188
               

               
Alignm identity:
               
134
               

               
Alignm E-value:
               
5e-25
               

               
Alignm gaps (pig, cow):
               
91, 0
               

               
Conread position:
               
200-479
               

               
Cow position:
               
chr22:31154092-31153815 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
283
               

               
Alignm identity:
               
213
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
49, 166
               

               
Conread position:
               
200-499
               

               
Cow position:
               
chr22:27835669-27835369 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
306
               

               
Alignm identity:
               
218
               

               
Alignm E-value:
               
2.99878e-43
               

               
Alignm gaps (pig, cow):
               
34, 15
               

               
Conread position:
               
200-597
               

               
Cow position:
               
chr22:27431568-27431937 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
399
               

               
Alignm identity:
               
288
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
91, 39
               

               
Conread position:
               
200-615
               

               
Cow position:
               
chr22:2216947-2216550 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
420
               

               
Alignm identity:
               
296
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
23, 107
               

               
Conread position:
               
200-615
               

               
Cow position:
               
chr22:44180731-44180321 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
420
               

               
Alignm identity:
               
304
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
26, 171
               

               
Conread position:
               
200-616
               

               
Cow position:
               
chr22:27328756-27329156 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
420
               

               
Alignm identity:
               
302
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
50, 56
               

               
Conread position:
               
200-620
               

               
Cow position:
               
chr22:38981017-38980630 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
422
               

               
Alignm identity:
               
308
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
188, 34
               

               
Conread position:
               
200-651
               

               
Cow position:
               
chr22:32895352-32894894 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
467
               

               
Alignm identity:
               
324
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
88, 27
               

               
Conread position:
               
201-361
               

               
Cow position:
               
chr22:28120862-28120695 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
168
               

               
Alignm identity:
               
127
               

               
Alignm E-value:
               
2e-26
               

               
Alignm gaps (pig, cow):
               
25, 0
               

               
Conread position:
               
201-541
               

               
Cow position:
               
chr22:10421167-10420833 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
343
               

               
Alignm identity:
               
258
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
64, 13
               

               
Conread position:
               
201-569
               

               
Cow position:
               
chr22:43119593-43119955 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
370
               

               
Alignm identity:
               
268
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
91, 178
               

               
Conread position:
               
201-596
               

               
Cow position:
               
chr22:4017609-4017222 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
398
               

               
Alignm identity:
               
294
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
90, 97
               

               
Conread position:
               
202-424
               

               
Cow position:
               
chr22:23750763-23750979 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
224
               

               
Alignm identity:
               
162
               

               
Alignm E-value:
               
1e-31
               

               
Alignm gaps (pig, cow):
               
88, 7
               

               
Conread position:
               
202-574
               

               
Cow position:
               
chr22:18126599-18126966 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
383
               

               
Alignm identity:
               
265
               

               
Alignm E-value:
               
2.99878e-43
               

               
Alignm gaps (pig, cow):
               
31, 63
               

               
Conread position:
               
202-604
               

               
Cow position:
               
chr22:30818587-30818988 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
416
               

               
Alignm identity:
               
277
               

               
Alignm E-value:
               
2e-36
               

               
Alignm gaps (pig, cow):
               
44, 53
               

               
Conread position:
               
203-614
               

               
Cow position:
               
chr22:3317256-3316858 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
417
               

               
Alignm identity:
               
303
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
25, 71
               

               
Conread position:
               
203-623
               

               
Cow position:
               
chr22:846039-845623 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
427
               

               
Alignm identity:
               
307
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
17, 11
               

               
Conread position:
               
204-614
               

               
Cow position:
               
chr22:2502959-2502567 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
414
               

               
Alignm identity:
               
311
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
45, 115
               

               
Conread position:
               
205-462
               

               
Cow position:
               
chr22:13932317-13932049 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
269
               

               
Alignm identity:
               
176
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
102, 0
               

               
Conread position:
               
205-597
               

               
Cow position:
               
chr22:17294805-17295182 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
394
               

               
Alignm identity:
               
291
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
87, 27
               

               
Conread position:
               
206-483
               

               
Cow position:
               
chr22:17224539-17224809 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
279
               

               
Alignm identity:
               
189
               

               
Alignm E-value:
               
3e-31
               

               
Alignm gaps (pig, cow):
               
86, 30
               

               
Conread position:
               
207-413
               

               
Cow position:
               
chr22:14755131-14754925 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
212
               

               
Alignm identity:
               
152
               

               
Alignm E-value:
               
2e-26
               

               
Alignm gaps (pig, cow):
               
84, 11
               

               
Conread position:
               
207-527
               

               
Cow position:
               
chr22:24628528-24628838 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
323
               

               
Alignm identity:
               
230
               

               
Alignm E-value:
               
1.4013e-45
               

               
Alignm gaps (pig, cow):
               
84, 99
               

               
Conread position:
               
207-614
               

               
Cow position:
               
chr22:5467225-5467639 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
425
               

               
Alignm identity:
               
290
               

               
Alignm E-value:
               
2.99878e-43
               

               
Alignm gaps (pig, cow):
               
87, 11
               

               
Conread position:
               
208-614
               

               
Cow position:
               
chr22:23857176-23856777 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
409
               

               
Alignm identity:
               
306
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
20, 156
               

               
Conread position:
               
210-402
               

               
Cow position:
               
chr22:26153059-26152867 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
196
               

               
Alignm identity:
               
141
               

               
Alignm E-value:
               
2e-26
               

               
Alignm gaps (pig, cow):
               
25, 165
               

               
Conread position:
               
210-414
               

               
Cow position:
               
chr22:26017619-26017816 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
205
               

               
Alignm identity:
               
149
               

               
Alignm E-value:
               
2e-29
               

               
Alignm gaps (pig, cow):
               
81, 0
               

               
Conread position:
               
210-467
               

               
Cow position:
               
chr22:25387454-25387195 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
263
               

               
Alignm identity:
               
197
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
10, 18
               

               
Conread position:
               
210-483
               

               
Cow position:
               
chr22:25540126-25539846 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
283
               

               
Alignm identity:
               
210
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
80, 87
               

               
Conread position:
               
210-614
               

               
Cow position:
               
chr22:31646617-31646223 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
408
               

               
Alignm identity:
               
294
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
82, 5
               

               
Conread position:
               
210-614
               

               
Cow position:
               
chr22:40072104-40071698 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
415
               

               
Alignm identity:
               
293
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
80, 127
               

               
Conread position:
               
211-411
               

               
Cow position:
               
chr22:29185480-29185681 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
204
               

               
Alignm identity:
               
155
               

               
Alignm E-value:
               
5e-37
               

               
Alignm gaps (pig, cow):
               
13, 97
               

               
Conread position:
               
211-413
               

               
Cow position:
               
chr22:13719906-13720098 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
204
               

               
Alignm identity:
               
144
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
81, 104
               

               
Conread position:
               
211-420
               

               
Cow position:
               
chr22:10553559-10553767 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
211
               

               
Alignm identity:
               
165
               

               
Alignm E-value:
               
4.2039e-45
               

               
Alignm gaps (pig, cow):
               
80, 149
               

               
Conread position:
               
211-458
               

               
Cow position:
               
chr22:6936382-6936145 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
249
               

               
Alignm identity:
               
187
               

               
Alignm E-value:
               
8.00001e-41
               

               
Alignm gaps (pig, cow):
               
81, 67
               

               
Conread position:
               
211-463
               

               
Cow position:
               
chr22:4542060-4541816 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
256
               

               
Alignm identity:
               
173
               

               
Alignm E-value:
               
4e-23
               

               
Alignm gaps (pig, cow):
               
80, 144
               

               
Conread position:
               
211-513
               

               
Cow position:
               
chr22:17126576-17126279 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
307
               

               
Alignm identity:
               
207
               

               
Alignm E-value:
               
3e-32
               

               
Alignm gaps (pig, cow):
               
26, 9
               

               
Conread position:
               
211-517
               

               
Cow position:
               
chr22:12803259-12803564 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
308
               

               
Alignm identity:
               
218
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
81, 244
               

               
Conread position:
               
211-602
               

               
Cow position:
               
chr22:27819126-27818744 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
400
               

               
Alignm identity:
               
270
               

               
Alignm E-value:
               
7e-40
               

               
Alignm gaps (pig, cow):
               
158, 30
               

               
Conread position:
               
211-607
               

               
Cow position:
               
chr22:30117637-30117254 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
401
               

               
Alignm identity:
               
259
               

               
Alignm E-value:
               
3e-30
               

               
Alignm gaps (pig, cow):
               
151, 22
               

               
Conread position:
               
211-610
               

               
Cow position:
               
chr22:29290019-29290403 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
402
               

               
Alignm identity:
               
285
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
81, 23
               

               
Conread position:
               
211-614
               

               
Cow position:
               
chr22:10919729-10920135 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
413
               

               
Alignm identity:
               
303
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
81, 34
               

               
Conread position:
               
211-615
               

               
Cow position:
               
chr22:38939815-38940221 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
414
               

               
Alignm identity:
               
294
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
35, 41
               

               
Conread position:
               
211-617
               

               
Cow position:
               
chr22:21502869-21502462 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
413
               

               
Alignm identity:
               
309
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
81, 5
               

               
Conread position:
               
211-626
               

               
Cow position:
               
chr22:4119436-4119852 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
419
               

               
Alignm identity:
               
308
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
81, 301
               

               
Conread position:
               
212-367
               

               
Cow position:
               
chr22:14381784-14381628 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
157
               

               
Alignm identity:
               
122
               

               
Alignm E-value:
               
3e-31
               

               
Alignm gaps (pig, cow):
               
80, 0
               

               
Conread position:
               
212-548
               

               
Cow position:
               
chr22:41854034-41853691 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
353
               

               
Alignm identity:
               
248
               

               
Alignm E-value:
               
3.00004e-41
               

               
Alignm gaps (pig, cow):
               
7, 219
               

               
Conread position:
               
212-593
               

               
Cow position:
               
chr22:12967943-12968319 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
386
               

               
Alignm identity:
               
287
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
14, 164
               

               
Conread position:
               
213-614
               

               
Cow position:
               
chr22:10122503-10122117 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
403
               

               
Alignm identity:
               
290
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
81, 204
               

               
Conread position:
               
213-614
               

               
Cow position:
               
chr22:30484039-30483641 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
403
               

               
Alignm identity:
               
298
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
79, 148
               

               
Conread position:
               
214-363
               

               
Cow position:
               
chr22:23398281-23398431 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
152
               

               
Alignm identity:
               
116
               

               
Alignm E-value:
               
5e-26
               

               
Alignm gaps (pig, cow):
               
32, 42
               

               
Conread position:
               
214-441
               

               
Cow position:
               
chr22:29389902-29389670 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
234
               

               
Alignm identity:
               
161
               

               
Alignm E-value:
               
2e-26
               

               
Alignm gaps (pig, cow):
               
77, 158
               

               
Conread position:
               
214-499
               

               
Cow position:
               
chr22:139182-139465 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
292
               

               
Alignm identity:
               
200
               

               
Alignm E-value:
               
9e-31
               

               
Alignm gaps (pig, cow):
               
84, 19
               

               
Conread position:
               
214-536
               

               
Cow position:
               
chr22:28640027-28640347 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
325
               

               
Alignm identity:
               
209
               

               
Alignm E-value:
               
2e-29
               

               
Alignm gaps (pig, cow):
               
21, 138
               

               
Conread position:
               
214-586
               

               
Cow position:
               
chr22:30114195-30113823 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
381
               

               
Alignm identity:
               
241
               

               
Alignm E-value:
               
5e-26
               

               
Alignm gaps (pig, cow):
               
78, 41
               

               
Conread position:
               
214-589
               

               
Cow position:
               
chr22:7882675-7882303 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
378
               

               
Alignm identity:
               
273
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
170, 77
               

               
Conread position:
               
214-601
               

               
Cow position:
               
chr22:22155726-22155343 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
391
               

               
Alignm identity:
               
274
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
78, 38
               

               
Conread position:
               
214-603
               

               
Cow position:
               
chr22:1591146-1590760 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
391
               

               
Alignm identity:
               
280
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
80, 19
               

               
Conread position:
               
214-614
               

               
Cow position:
               
chr22:21746766-21746368 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
412
               

               
Alignm identity:
               
291
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
30, 42
               

               
Conread position:
               
214-619
               

               
Cow position:
               
chr22:11778487-11778886 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
409
               

               
Alignm identity:
               
274
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
77, 125
               

               
Conread position:
               
215-499
               

               
Cow position:
               
chr22:2912468-2912743 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
287
               

               
Alignm identity:
               
210
               

               
Alignm E-value:
               
9.94922e-44
               

               
Alignm gaps (pig, cow):
               
77, 48
               

               
Conread position:
               
215-501
               

               
Cow position:
               
chr22:19173824-19173536 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
295
               

               
Alignm identity:
               
214
               

               
Alignm E-value:
               
4.06377e-44
               

               
Alignm gaps (pig, cow):
               
65, 154
               

               
Conread position:
               
215-540
               

               
Cow position:
               
chr22:22908308-22907996 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
329
               

               
Alignm identity:
               
236
               

               
Alignm E-value:
               
4.2039e-45
               

               
Alignm gaps (pig, cow):
               
237, 76
               

               
Conread position:
               
215-570
               

               
Cow position:
               
chr22:13769600-13769252 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
364
               

               
Alignm identity:
               
237
               

               
Alignm E-value:
               
6e-28
               

               
Alignm gaps (pig, cow):
               
14, 164
               

               
Conread position:
               
215-584
               

               
Cow position:
               
chr22:23403520-23403882 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
378
               

               
Alignm identity:
               
271
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
82, 60
               

               
Conread position:
               
215-590
               

               
Cow position:
               
chr22:3252837-3253183 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
378
               

               
Alignm identity:
               
253
               

               
Alignm E-value:
               
3e-30
               

               
Alignm gaps (pig, cow):
               
108, 40
               

               
Conread position:
               
215-607
               

               
Cow position:
               
chr22:21295603-21295988 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
395
               

               
Alignm identity:
               
298
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
76, 83
               

               
Conread position:
               
215-611
               

               
Cow position:
               
chr22:27581561-27581181 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
403
               

               
Alignm identity:
               
286
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
77, 59
               

               
Conread position:
               
215-614
               

               
Cow position:
               
chr22:8840727-8840316 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
417
               

               
Alignm identity:
               
298
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
77, 300
               

               
Conread position:
               
215-614
               

               
Cow position:
               
chr22:10532622-10532225 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
412
               

               
Alignm identity:
               
292
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
77, 147
               

               
Conread position:
               
215-623
               

               
Cow position:
               
chr22:24175774-24176154 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
409
               

               
Alignm identity:
               
282
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
76, 0
               

               
Conread position:
               
216-412
               

               
Cow position:
               
chr22:35029389-35029191 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
200
               

               
Alignm identity:
               
143
               

               
Alignm E-value:
               
2e-28
               

               
Alignm gaps (pig, cow):
               
76, 65
               

               
Conread position:
               
216-612
               

               
Cow position:
               
chr22:8481763-8481377 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
400
               

               
Alignm identity:
               
289
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
75, 17
               

               
Conread position:
               
216-613
               

               
Cow position:
               
chr22:877636-877253 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
400
               

               
Alignm identity:
               
298
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
76, 153
               

               
Conread position:
               
216-613
               

               
Cow position:
               
chr22:29954886-29955269 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
400
               

               
Alignm identity:
               
291
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
85, 11
               

               
Conread position:
               
216-615
               

               
Cow position:
               
chr22:1265803-1266207 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
410
               

               
Alignm identity:
               
289
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
76, 170
               

               
Conread position:
               
216-628
               

               
Cow position:
               
chr22:30049445-30049858 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
417
               

               
Alignm identity:
               
312
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
76, 155
               

               
Conread position:
               
217-356
               

               
Cow position:
               
chr22:10324001-10323860 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
142
               

               
Alignm identity:
               
105
               

               
Alignm E-value:
               
3e-21
               

               
Alignm gaps (pig, cow):
               
18, 0
               

               
Conread position:
               
217-416
               

               
Cow position:
               
chr22:45505885-45506083 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
206
               

               
Alignm identity:
               
145
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
116, 74
               

               
Conread position:
               
217-438
               

               
Cow position:
               
chr22:26075041-26074822 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
225
               

               
Alignm identity:
               
168
               

               
Alignm E-value:
               
2e-37
               

               
Alignm gaps (pig, cow):
               
74, 159
               

               
Conread position:
               
217-441
               

               
Cow position:
               
chr22:9597460-9597683 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
226
               

               
Alignm identity:
               
167
               

               
Alignm E-value:
               
2e-39
               

               
Alignm gaps (pig, cow):
               
69, 89
               

               
Conread position:
               
217-512
               

               
Cow position:
               
chr22:27741010-27740718 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
301
               

               
Alignm identity:
               
213
               

               
Alignm E-value:
               
2e-40
               

               
Alignm gaps (pig, cow):
               
75, 114
               

               
Conread position:
               
217-603
               

               
Cow position:
               
chr22:24066113-24066495 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
394
               

               
Alignm identity:
               
282
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
141, 86
               

               
Conread position:
               
217-614
               

               
Cow position:
               
chr22:15039063-15039457 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
403
               

               
Alignm identity:
               
295
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
71, 16
               

               
Conread position:
               
218-590
               

               
Cow position:
               
chr22:7852081-7851712 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
376
               

               
Alignm identity:
               
271
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
74, 23
               

               
Conread position:
               
218-613
               

               
Cow position:
               
chr22:14924613-14924994 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
397
               

               
Alignm identity:
               
291
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
76, 152
               

               
Conread position:
               
218-614
               

               
Cow position:
               
chr22:1279266-1279657 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
401
               

               
Alignm identity:
               
286
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
26, 38
               

               
Conread position:
               
218-614
               

               
Cow position:
               
chr22:25943594-25943210 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
399
               

               
Alignm identity:
               
291
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
76, 155
               

               
Conread position:
               
219-400
               

               
Cow position:
               
chr22:28672262-28672082 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
183
               

               
Alignm identity:
               
130
               

               
Alignm E-value:
               
1e-24
               

               
Alignm gaps (pig, cow):
               
73, 8
               

               
Conread position:
               
219-582
               

               
Cow position:
               
chr22:25715123-25714771 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
368
               

               
Alignm identity:
               
241
               

               
Alignm E-value:
               
9e-31
               

               
Alignm gaps (pig, cow):
               
25, 37
               

               
Conread position:
               
220-387
               

               
Cow position:
               
chr22:11344624-11344456 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
172
               

               
Alignm identity:
               
132
               

               
Alignm E-value:
               
2e-28
               

               
Alignm gaps (pig, cow):
               
72, 7
               

               
Conread position:
               
220-542
               

               
Cow position:
               
chr22:2524080-2523763 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
325
               

               
Alignm identity:
               
231
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
72, 144
               

               
Conread position:
               
220-602
               

               
Cow position:
               
chr22:28351552-28351915 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
385
               

               
Alignm identity:
               
277
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
303, 54
               

               
Conread position:
               
220-603
               

               
Cow position:
               
chr22:25742832-25743213 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
387
               

               
Alignm identity:
               
297
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
71, 189
               

               
Conread position:
               
221-614
               

               
Cow position:
               
chr22:10684975-10685353 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
396
               

               
Alignm identity:
               
274
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
137, 65
               

               
Conread position:
               
221-614
               

               
Cow position:
               
chr22:46567777-46568160 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
399
               

               
Alignm identity:
               
293
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
8, 46
               

               
Conread position:
               
222-370
               

               
Cow position:
               
chr22:1838421-1838276 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
150
               

               
Alignm identity:
               
113
               

               
Alignm E-value:
               
4e-23
               

               
Alignm gaps (pig, cow):
               
70, 14
               

               
Conread position:
               
222-459
               

               
Cow position:
               
chr22:12341311-12341074 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
240
               

               
Alignm identity:
               
171
               

               
Alignm E-value:
               
2e-36
               

               
Alignm gaps (pig, cow):
               
141, 159
               

               
Conread position:
               
222-478
               

               
Cow position:
               
chr22:21393200-21393459 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
263
               

               
Alignm identity:
               
174
               

               
Alignm E-value:
               
4e-24
               

               
Alignm gaps (pig, cow):
               
26, 19
               

               
Conread position:
               
222-609
               

               
Cow position:
               
chr22:26141389-26141008 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
390
               

               
Alignm identity:
               
285
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
70, 38
               

               
Conread position:
               
223-590
               

               
Cow position:
               
chr22:2627694-2627329 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
376
               

               
Alignm identity:
               
264
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
72, 107
               

               
Conread position:
               
223-596
               

               
Cow position:
               
chr22:590452-590090 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
377
               

               
Alignm identity:
               
270
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
68, 9
               

               
Conread position:
               
223-613
               

               
Cow position:
               
chr22:34712839-34712444 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
400
               

               
Alignm identity:
               
296
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
69, 32
               

               
Conread position:
               
224-537
               

               
Cow position:
               
chr22:23121889-23122220 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
336
               

               
Alignm identity:
               
242
               

               
Alignm E-value:
               
3.00018e-42
               

               
Alignm gaps (pig, cow):
               
26, 32
               

               
Conread position:
               
224-565
               

               
Cow position:
               
chr22:10633027-10632693 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
343
               

               
Alignm identity:
               
255
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
68, 100
               

               
Conread position:
               
224-613
               

               
Cow position:
               
chr22:19787565-19787949 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
393
               

               
Alignm identity:
               
250
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
14, 32
               

               
Conread position:
               
224-614
               

               
Cow position:
               
chr22:21355028-21355412 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
395
               

               
Alignm identity:
               
283
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
68, 148
               

               
Conread position:
               
224-629
               

               
Cow position:
               
chr22:24734204-24734596 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
410
               

               
Alignm identity:
               
287
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
7, 49
               

               
Conread position:
               
224-644
               

               
Cow position:
               
chr22:19047703-19048105 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
425
               

               
Alignm identity:
               
292
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
50, 58
               

               
Conread position:
               
225-495
               

               
Cow position:
               
chr22:45846253-45845989 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
271
               

               
Alignm identity:
               
200
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
16, 0
               

               
Conread position:
               
226-614
               

               
Cow position:
               
chr22:26184050-26184431 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
392
               

               
Alignm identity:
               
286
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
86, 65
               

               
Conread position:
               
227-578
               

               
Cow position:
               
chr22:14119086-14118739 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
356
               

               
Alignm identity:
               
234
               

               
Alignm E-value:
               
4e-33
               

               
Alignm gaps (pig, cow):
               
22, 29
               

               
Conread position:
               
227-581
               

               
Cow position:
               
chr22:4161511-4161851 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
361
               

               
Alignm identity:
               
241
               

               
Alignm E-value:
               
7e-29
               

               
Alignm gaps (pig, cow):
               
22, 29
               

               
Conread position:
               
227-597
               

               
Cow position:
               
chr22:42945938-42946307 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
379
               

               
Alignm identity:
               
248
               

               
Alignm E-value:
               
1e-32
               

               
Alignm gaps (pig, cow):
               
22, 29
               

               
Conread position:
               
227-612
               

               
Cow position:
               
chr22:5337488-5337867 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
391
               

               
Alignm identity:
               
280
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
9, 30
               

               
Conread position:
               
227-613
               

               
Cow position:
               
chr22:41245364-41244976 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
398
               

               
Alignm identity:
               
288
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
65, 54
               

               
Conread position:
               
227-613
               

               
Cow position:
               
chr22:42612569-42612188 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
388
               

               
Alignm identity:
               
272
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
72, 190
               

               
Conread position:
               
227-614
               

               
Cow position:
               
chr22:4651287-4650910 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
394
               

               
Alignm identity:
               
263
               

               
Alignm E-value:
               
5e-36
               

               
Alignm gaps (pig, cow):
               
22, 40
               

               
Conread position:
               
227-659
               

               
Cow position:
               
chr22:15090852-15090423 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
438
               

               
Alignm identity:
               
319
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
65, 137
               

               
Conread position:
               
228-407
               

               
Cow position:
               
chr22:4137542-4137720 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
182
               

               
Alignm identity:
               
127
               

               
Alignm E-value:
               
9e-21
               

               
Alignm gaps (pig, cow):
               
63, 125
               

               
Conread position:
               
228-551
               

               
Cow position:
               
chr22:43743237-43743538 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
326
               

               
Alignm identity:
               
222
               

               
Alignm E-value:
               
7e-29
               

               
Alignm gaps (pig, cow):
               
64, 6
               

               
Conread position:
               
228-582
               

               
Cow position:
               
chr22:2148677-2148334 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
356
               

               
Alignm identity:
               
238
               

               
Alignm E-value:
               
2e-37
               

               
Alignm gaps (pig, cow):
               
71, 79
               

               
Conread position:
               
228-584
               

               
Cow position:
               
chr22:5384761-5384414 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
359
               

               
Alignm identity:
               
267
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
154, 44
               

               
Conread position:
               
230-546
               

               
Cow position:
               
chr22:11458922-11458621 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
319
               

               
Alignm identity:
               
244
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
228, 23
               

               
Conread position:
               
232-602
               

               
Cow position:
               
chr22:864410-864777 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
374
               

               
Alignm identity:
               
270
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
27, 67
               

               
Conread position:
               
232-602
               

               
Cow position:
               
chr22:7838695-7838346 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
372
               

               
Alignm identity:
               
270
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
60, 77
               

               
Conread position:
               
232-605
               

               
Cow position:
               
chr22:30699283-30698917 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
378
               

               
Alignm identity:
               
278
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
60, 17
               

               
Conread position:
               
233-571
               

               
Cow position:
               
chr22:13300515-13300181 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
341
               

               
Alignm identity:
               
233
               

               
Alignm E-value:
               
2.99878e-43
               

               
Alignm gaps (pig, cow):
               
61, 130
               

               
Conread position:
               
233-611
               

               
Cow position:
               
chr22:9977913-9977552 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
380
               

               
Alignm identity:
               
278
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
56, 46
               

               
Conread position:
               
233-614
               

               
Cow position:
               
chr22:4645875-4645506 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
383
               

               
Alignm identity:
               
273
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
59, 17
               

               
Conread position:
               
235-589
               

               
Cow position:
               
chr22:5622615-5622964 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
358
               

               
Alignm identity:
               
223
               

               
Alignm E-value:
               
4e-23
               

               
Alignm gaps (pig, cow):
               
14, 21
               

               
Conread position:
               
235-603
               

               
Cow position:
               
chr22:44835758-44835382 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
381
               

               
Alignm identity:
               
259
               

               
Alignm E-value:
               
3.00004e-41
               

               
Alignm gaps (pig, cow):
               
14, 21
               

               
Conread position:
               
235-623
               

               
Cow position:
               
chr22:9521246-9520870 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
394
               

               
Alignm identity:
               
280
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
70, 57
               

               
Conread position:
               
236-417
               

               
Cow position:
               
chr22:13734919-13735094 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
182
               

               
Alignm identity:
               
130
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
55, 0
               

               
Conread position:
               
236-510
               

               
Cow position:
               
chr22:14638376-14638652 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
280
               

               
Alignm identity:
               
210
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
58, 143
               

               
Conread position:
               
236-551
               

               
Cow position:
               
chr22:17125683-17125374 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
321
               

               
Alignm identity:
               
240
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
225, 54
               

               
Conread position:
               
236-579
               

               
Cow position:
               
chr22:36633324-36632996 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
344
               

               
Alignm identity:
               
230
               

               
Alignm E-value:
               
1e-35
               

               
Alignm gaps (pig, cow):
               
60, 0
               

               
Conread position:
               
236-593
               

               
Cow position:
               
chr22:12946081-12946416 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
362
               

               
Alignm identity:
               
269
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
219, 55
               

               
Conread position:
               
237-428
               

               
Cow position:
               
chr22:18293665-18293851 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
193
               

               
Alignm identity:
               
142
               

               
Alignm E-value:
               
7e-29
               

               
Alignm gaps (pig, cow):
               
56, 102
               

               
Conread position:
               
237-623
               

               
Cow position:
               
chr22:19775334-19775705 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
390
               

               
Alignm identity:
               
280
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
55, 25
               

               
Conread position:
               
241-512
               

               
Cow position:
               
chr22:9283502-9283772 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
274
               

               
Alignm identity:
               
199
               

               
Alignm E-value:
               
1.4013e-45
               

               
Alignm gaps (pig, cow):
               
50, 121
               

               
Conread position:
               
242-515
               

               
Cow position:
               
chr22:6574840-6574561 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
281
               

               
Alignm identity:
               
187
               

               
Alignm E-value:
               
6e-28
               

               
Alignm gaps (pig, cow):
               
56, 130
               

               
Conread position:
               
244-428
               

               
Cow position:
               
chr22:3544230-3544046 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
188
               

               
Alignm identity:
               
136
               

               
Alignm E-value:
               
2e-25
               

               
Alignm gaps (pig, cow):
               
18, 49
               

               
Conread position:
               
244-459
               

               
Cow position:
               
chr22:4011277-4011063 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
218
               

               
Alignm identity:
               
152
               

               
Alignm E-value:
               
6e-27
               

               
Alignm gaps (pig, cow):
               
48, 125
               

               
Conread position:
               
245-602
               

               
Cow position:
               
chr22:7885082-7884732 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
359
               

               
Alignm identity:
               
243
               

               
Alignm E-value:
               
9.80909e-45
               

               
Alignm gaps (pig, cow):
               
47, 135
               

               
Conread position:
               
246-542
               

               
Cow position:
               
chr22:16650109-16650402 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
301
               

               
Alignm identity:
               
209
               

               
Alignm E-value:
               
2e-36
               

               
Alignm gaps (pig, cow):
               
47, 9
               

               
Conread position:
               
246-623
               

               
Cow position:
               
chr22:22997566-22997199 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
380
               

               
Alignm identity:
               
253
               

               
Alignm E-value:
               
7e-39
               

               
Alignm gaps (pig, cow):
               
54, 9
               

               
Conread position:
               
250-361
               

               
Cow position:
               
chr22:29842618-29842729 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
113
               

               
Alignm identity:
               
90
               

               
Alignm E-value:
               
9e-21
               

               
Alignm gaps (pig, cow):
               
42, 5
               

               
Conread position:
               
250-603
               

               
Cow position:
               
chr22:22160813-22160461 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
355
               

               
Alignm identity:
               
258
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
44, 265
               

               
Conread position:
               
250-614
               

               
Cow position:
               
chr22:43291816-43292173 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
368
               

               
Alignm identity:
               
287
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
42, 5
               

               
Conread position:
               
253-421
               

               
Cow position:
               
chr22:28290202-28290036 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
170
               

               
Alignm identity:
               
124
               

               
Alignm E-value:
               
4e-24
               

               
Alignm gaps (pig, cow):
               
41, 111
               

               
Conread position:
               
253-614
               

               
Cow position:
               
chr22:34398372-34398726 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
364
               

               
Alignm identity:
               
265
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
39, 119
               

               
Conread position:
               
255-428
               

               
Cow position:
               
chr22:24223151-24222989 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
175
               

               
Alignm identity:
               
132
               

               
Alignm E-value:
               
4e-23
               

               
Alignm gaps (pig, cow):
               
37, 16
               

               
Conread position:
               
255-623
               

               
Cow position:
               
chr22:27224209-27223852 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
374
               

               
Alignm identity:
               
258
               

               
Alignm E-value:
               
9.00054e-42
               

               
Alignm gaps (pig, cow):
               
45, 35
               

               
Conread position:
               
255-636
               

               
Cow position:
               
chr22:11257666-11258029 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
385
               

               
Alignm identity:
               
277
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
41, 28
               

               
Conread position:
               
258-614
               

               
Cow position:
               
chr22:15760441-15760085 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
373
               

               
Alignm identity:
               
255
               

               
Alignm E-value:
               
4e-35
               

               
Alignm gaps (pig, cow):
               
34, 78
               

               
Conread position:
               
259-603
               

               
Cow position:
               
chr22:31592778-31593121 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
351
               

               
Alignm identity:
               
265
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
108, 31
               

               
Conread position:
               
261-501
               

               
Cow position:
               
chr22:3241627-3241859 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
243
               

               
Alignm identity:
               
187
               

               
Alignm E-value:
               
4.06377e-44
               

               
Alignm gaps (pig, cow):
               
33, 48
               

               
Conread position:
               
261-564
               

               
Cow position:
               
chr22:13849377-13849671 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
310
               

               
Alignm identity:
               
227
               

               
Alignm E-value:
               
1.00053e-42
               

               
Alignm gaps (pig, cow):
               
30, 37
               

               
Conread position:
               
263-621
               

               
Cow position:
               
chr22:30964202-30963852 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
370
               

               
Alignm identity:
               
263
               

               
Alignm E-value:
               
9.94922e-44
               

               
Alignm gaps (pig, cow):
               
29, 99
               

               
Conread position:
               
264-616
               

               
Cow position:
               
chr22:17992958-17993303 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
355
               

               
Alignm identity:
               
255
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
28, 126
               

               
Conread position:
               
265-459
               

               
Cow position:
               
chr22:27619806-27619608 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
200
               

               
Alignm identity:
               
143
               

               
Alignm E-value:
               
5e-26
               

               
Alignm gaps (pig, cow):
               
27, 106
               

               
Conread position:
               
265-579
               

               
Cow position:
               
chr22:47741492-47741180 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
319
               

               
Alignm identity:
               
217
               

               
Alignm E-value:
               
6e-38
               

               
Alignm gaps (pig, cow):
               
27, 45
               

               
Conread position:
               
265-611
               

               
Cow position:
               
chr22:29013952-29013609 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
353
               

               
Alignm identity:
               
248
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
27, 37
               

               
Conread position:
               
265-615
               

               
Cow position:
               
chr22:31213651-31213300 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
355
               

               
Alignm identity:
               
240
               

               
Alignm E-value:
               
4.06377e-44
               

               
Alignm gaps (pig, cow):
               
42, 133
               

               
Conread position:
               
266-564
               

               
Cow position:
               
chr22:15068498-15068204 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
303
               

               
Alignm identity:
               
211
               

               
Alignm E-value:
               
2e-37
               

               
Alignm gaps (pig, cow):
               
26, 76
               

               
Conread position:
               
267-614
               

               
Cow position:
               
chr22:15338183-15337843 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
350
               

               
Alignm identity:
               
250
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
29, 24
               

               
Conread position:
               
271-610
               

               
Cow position:
               
chr22:912164-911835 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
343
               

               
Alignm identity:
               
238
               

               
Alignm E-value:
               
9.00054e-42
               

               
Alignm gaps (pig, cow):
               
21, 98
               

               
Conread position:
               
275-495
               

               
Cow position:
               
chr22:1874755-1874536 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
226
               

               
Alignm identity:
               
169
               

               
Alignm E-value:
               
5e-36
               

               
Alignm gaps (pig, cow):
               
25, 16
               

               
Conread position:
               
275-616
               

               
Cow position:
               
chr22:26490532-26490188 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
351
               

               
Alignm identity:
               
255
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
56, 245
               

               
Conread position:
               
276-601
               

               
Cow position:
               
chr22:39302938-39303264 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
331
               

               
Alignm identity:
               
226
               

               
Alignm E-value:
               
2e-40
               

               
Alignm gaps (pig, cow):
               
24, 45
               

               
Conread position:
               
276-614
               

               
Cow position:
               
chr22:3993671-3993339 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
340
               

               
Alignm identity:
               
247
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
16, 86
               

               
Conread position:
               
276-625
               

               
Cow position:
               
chr22:26097559-26097896 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
351
               

               
Alignm identity:
               
252
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
339, 86
               

               
Conread position:
               
277-603
               

               
Cow position:
               
chr22:14844626-14844314 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
329
               

               
Alignm identity:
               
244
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
178, 24
               

               
Conread position:
               
278-480
               

               
Cow position:
               
chr22:45019785-45019978 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
204
               

               
Alignm identity:
               
143
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
198, 14
               

               
Conread position:
               
279-613
               

               
Cow position:
               
chr22:15919582-15919905 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
339
               

               
Alignm identity:
               
232
               

               
Alignm E-value:
               
2e-37
               

               
Alignm gaps (pig, cow):
               
13, 76
               

               
Conread position:
               
281-460
               

               
Cow position:
               
chr22:14835170-14835341 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
181
               

               
Alignm identity:
               
134
               

               
Alignm E-value:
               
5e-26
               

               
Alignm gaps (pig, cow):
               
11, 81
               

               
Conread position:
               
283-446
               

               
Cow position:
               
chr22:4135670-4135510 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
165
               

               
Alignm identity:
               
125
               

               
Alignm E-value:
               
6e-27
               

               
Alignm gaps (pig, cow):
               
9, 79
               

               
Conread position:
               
283-609
               

               
Cow position:
               
chr22:30710457-30710135 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
336
               

               
Alignm identity:
               
240
               

               
Alignm E-value:
               
2.99878e-43
               

               
Alignm gaps (pig, cow):
               
38, 19
               

               
Conread position:
               
285-603
               

               
Cow position:
               
chr22:14376360-14376653 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
320
               

               
Alignm identity:
               
230
               

               
Alignm E-value:
               
7e-39
               

               
Alignm gaps (pig, cow):
               
7, 79
               

               
Conread position:
               
286-535
               

               
Cow position:
               
chr22:10677942-10678177 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
251
               

               
Alignm identity:
               
189
               

               
Alignm E-value:
               
7e-40
               

               
Alignm gaps (pig, cow):
               
79, 7
               

               
Conread position:
               
286-614
               

               
Cow position:
               
chr22:13011219-13011548 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
335
               

               
Alignm identity:
               
241
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
48, 7
               

               
Conread position:
               
293-459
               

               
Cow position:
               
chr22:45579010-45578843 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
169
               

               
Alignm identity:
               
121
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
14, 80
               

               
Conread position:
               
295-586
               

               
Cow position:
               
chr22:11745862-11746149 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
294
               

               
Alignm identity:
               
206
               

               
Alignm E-value:
               
7e-40
               

               
Alignm gaps (pig, cow):
               
61, 77
               

               
Conread position:
               
297-613
               

               
Cow position:
               
chr22:6202958-6202643 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
322
               

               
Alignm identity:
               
232
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
26, 81
               

               
Conread position:
               
298-510
               

               
Cow position:
               
chr22:43938141-43937931 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
216
               

               
Alignm identity:
               
148
               

               
Alignm E-value:
               
3e-22
               

               
Alignm gaps (pig, cow):
               
32, 53
               

               
Conread position:
               
298-618
               

               
Cow position:
               
chr22:1974108-1974424 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
325
               

               
Alignm identity:
               
221
               

               
Alignm E-value:
               
2e-37
               

               
Alignm gaps (pig, cow):
               
20, 71
               

               
Conread position:
               
299-602
               

               
Cow position:
               
chr22:30955064-30954780 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
304
               

               
Alignm identity:
               
224
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
48, 0
               

               
Conread position:
               
299-616
               

               
Cow position:
               
chr22:3960246-3960567 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
326
               

               
Alignm identity:
               
234
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
56, 75
               

               
Conread position:
               
300-590
               

               
Cow position:
               
chr22:25629728-25630020 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
298
               

               
Alignm identity:
               
232
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
163, 71
               

               
Conread position:
               
301-629
               

               
Cow position:
               
chr22:8284016-8283698 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
333
               

               
Alignm identity:
               
229
               

               
Alignm E-value:
               
4e-35
               

               
Alignm gaps (pig, cow):
               
50, 57
               

               
Conread position:
               
304-551
               

               
Cow position:
               
chr22:4674351-4674112 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
250
               

               
Alignm identity:
               
167
               

               
Alignm E-value:
               
3e-21
               

               
Alignm gaps (pig, cow):
               
150, 16
               

               
Conread position:
               
305-575
               

               
Cow position:
               
chr22:10585672-10585933 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
272
               

               
Alignm identity:
               
214
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
66, 94
               

               
Conread position:
               
305-593
               

               
Cow position:
               
chr22:41270970-41271241 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
289
               

               
Alignm identity:
               
222
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
56, 0
               

               
Conread position:
               
306-593
               

               
Cow position:
               
chr22:294903-295187 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
291
               

               
Alignm identity:
               
205
               

               
Alignm E-value:
               
2e-40
               

               
Alignm gaps (pig, cow):
               
62, 91
               

               
Conread position:
               
306-614
               

               
Cow position:
               
chr22:33901054-33901346 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
309
               

               
Alignm identity:
               
203
               

               
Alignm E-value:
               
5e-26
               

               
Alignm gaps (pig, cow):
               
57, 0
               

               
Conread position:
               
306-645
               

               
Cow position:
               
chr22:36574554-36574902 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
353
               

               
Alignm identity:
               
240
               

               
Alignm E-value:
               
2e-37
               

               
Alignm gaps (pig, cow):
               
55, 68
               

               
Conread position:
               
307-585
               

               
Cow position:
               
chr22:22146263-22145986 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
281
               

               
Alignm identity:
               
211
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
10, 65
               

               
Conread position:
               
307-589
               

               
Cow position:
               
chr22:20331950-20332227 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
290
               

               
Alignm identity:
               
195
               

               
Alignm E-value:
               
5e-26
               

               
Alignm gaps (pig, cow):
               
23, 59
               

               
Conread position:
               
307-614
               

               
Cow position:
               
chr22:32487427-32487729 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
309
               

               
Alignm identity:
               
202
               

               
Alignm E-value:
               
3e-30
               

               
Alignm gaps (pig, cow):
               
153, 80
               

               
Conread position:
               
308-645
               

               
Cow position:
               
chr22:36545897-36546240 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
346
               

               
Alignm identity:
               
236
               

               
Alignm E-value:
               
2.99878e-43
               

               
Alignm gaps (pig, cow):
               
146, 67
               

               
Conread position:
               
311-459
               

               
Cow position:
               
chr22:21264319-21264171 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
149
               

               
Alignm identity:
               
108
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
311-603
               

               
Cow position:
               
chr22:6122879-6123155 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
293
               

               
Alignm identity:
               
218
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
52, 0
               

               
Conread position:
               
311-609
               

               
Cow position:
               
chr22:16057727-16057435 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
303
               

               
Alignm identity:
               
227
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
74, 58
               

               
Conread position:
               
312-614
               

               
Cow position:
               
chr22:23865494-23865191 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
308
               

               
Alignm identity:
               
231
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
59, 63
               

               
Conread position:
               
313-605
               

               
Cow position:
               
chr22:19738546-19738840 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
298
               

               
Alignm identity:
               
202
               

               
Alignm E-value:
               
4e-34
               

               
Alignm gaps (pig, cow):
               
72, 56
               

               
Conread position:
               
315-614
               

               
Cow position:
               
chr22:853042-852758 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
302
               

               
Alignm identity:
               
217
               

               
Alignm E-value:
               
7e-40
               

               
Alignm gaps (pig, cow):
               
38, 34
               

               
Conread position:
               
316-485
               

               
Cow position:
               
chr22:26506704-26506871 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
172
               

               
Alignm identity:
               
128
               

               
Alignm E-value:
               
6e-27
               

               
Alignm gaps (pig, cow):
               
55, 126
               

               
Conread position:
               
317-551
               

               
Cow position:
               
chr22:4974404-4974628 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
237
               

               
Alignm identity:
               
182
               

               
Alignm E-value:
               
8.00001e-41
               

               
Alignm gaps (pig, cow):
               
48, 54
               

               
Conread position:
               
321-597
               

               
Cow position:
               
chr22:28731692-28731432 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
278
               

               
Alignm identity:
               
202
               

               
Alignm E-value:
               
6e-38
               

               
Alignm gaps (pig, cow):
               
62, 49
               

               
Conread position:
               
322-503
               

               
Cow position:
               
chr22:4632019-4631827 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
193
               

               
Alignm identity:
               
141
               

               
Alignm E-value:
               
2e-25
               

               
Alignm gaps (pig, cow):
               
41, 0
               

               
Conread position:
               
322-506
               

               
Cow position:
               
chr22:11497215-11497025 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
192
               

               
Alignm identity:
               
148
               

               
Alignm E-value:
               
1e-35
               

               
Alignm gaps (pig, cow):
               
137, 49
               

               
Conread position:
               
322-515
               

               
Cow position:
               
chr22:12599101-12598912 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
195
               

               
Alignm identity:
               
156
               

               
Alignm E-value:
               
3.00004e-41
               

               
Alignm gaps (pig, cow):
               
101, 52
               

               
Conread position:
               
322-551
               

               
Cow position:
               
chr22:10363082-10362846 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
242
               

               
Alignm identity:
               
174
               

               
Alignm E-value:
               
8e-30
               

               
Alignm gaps (pig, cow):
               
133, 44
               

               
Conread position:
               
322-606
               

               
Cow position:
               
chr22:35533337-35533618 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
296
               

               
Alignm identity:
               
222
               

               
Alignm E-value:
               
9.94922e-44
               

               
Alignm gaps (pig, cow):
               
80, 40
               

               
Conread position:
               
323-614
               

               
Cow position:
               
chr22:5042327-5042048 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
293
               

               
Alignm identity:
               
211
               

               
Alignm E-value:
               
9.00054e-42
               

               
Alignm gaps (pig, cow):
               
236, 40
               

               
Conread position:
               
323-614
               

               
Cow position:
               
chr22:11500792-11500511 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
294
               

               
Alignm identity:
               
222
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
140, 39
               

               
Conread position:
               
323-616
               

               
Cow position:
               
chr22:30712773-30712478 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
299
               

               
Alignm identity:
               
215
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
136, 44
               

               
Conread position:
               
324-614
               

               
Cow position:
               
chr22:45271595-45271308 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
294
               

               
Alignm identity:
               
207
               

               
Alignm E-value:
               
3.00004e-41
               

               
Alignm gaps (pig, cow):
               
62, 32
               

               
Conread position:
               
325-548
               

               
Cow position:
               
chr22:1602201-1601978 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
230
               

               
Alignm identity:
               
173
               

               
Alignm E-value:
               
6e-38
               

               
Alignm gaps (pig, cow):
               
134, 44
               

               
Conread position:
               
325-565
               

               
Cow position:
               
chr22:33917887-33918121 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
245
               

               
Alignm identity:
               
170
               

               
Alignm E-value:
               
5e-26
               

               
Alignm gaps (pig, cow):
               
121, 36
               

               
Conread position:
               
325-613
               

               
Cow position:
               
chr22:28179869-28179573 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
298
               

               
Alignm identity:
               
215
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
40, 176
               

               
Conread position:
               
325-629
               

               
Cow position:
               
chr22:6360475-6360775 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
308
               

               
Alignm identity:
               
231
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
38, 52
               

               
Conread position:
               
326-586
               

               
Cow position:
               
chr22:12777581-12777826 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
262
               

               
Alignm identity:
               
198
               

               
Alignm E-value:
               
2.99878e-43
               

               
Alignm gaps (pig, cow):
               
96, 34
               

               
Conread position:
               
326-614
               

               
Cow position:
               
chr22:18654033-18654323 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
296
               

               
Alignm identity:
               
208
               

               
Alignm E-value:
               
2e-38
               

               
Alignm gaps (pig, cow):
               
55, 43
               

               
Conread position:
               
326-623
               

               
Cow position:
               
chr22:25342026-25341740 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
299
               

               
Alignm identity:
               
225
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
137, 20
               

               
Conread position:
               
328-580
               

               
Cow position:
               
chr22:20687311-20687056 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
264
               

               
Alignm identity:
               
199
               

               
Alignm E-value:
               
9.00054e-42
               

               
Alignm gaps (pig, cow):
               
9, 33
               

               
Conread position:
               
332-516
               

               
Cow position:
               
chr22:23120164-23119980 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
187
               

               
Alignm identity:
               
133
               

               
Alignm E-value:
               
1e-24
               

               
Alignm gaps (pig, cow):
               
52, 36
               

               
Conread position:
               
332-551
               

               
Cow position:
               
chr22:18218885-18219102 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
223
               

               
Alignm identity:
               
158
               

               
Alignm E-value:
               
2e-29
               

               
Alignm gaps (pig, cow):
               
123, 31
               

               
Conread position:
               
332-562
               

               
Cow position:
               
chr22:10403497-10403715 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
231
               

               
Alignm identity:
               
166
               

               
Alignm E-value:
               
3e-30
               

               
Alignm gaps (pig, cow):
               
33, 0
               

               
Conread position:
               
333-614
               

               
Cow position:
               
chr22:9734858-9734585 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
284
               

               
Alignm identity:
               
213
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
10, 32
               

               
Conread position:
               
337-605
               

               
Cow position:
               
chr22:1821872-1822135 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
271
               

               
Alignm identity:
               
206
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
35, 26
               

               
Conread position:
               
340-614
               

               
Cow position:
               
chr22:26107055-26106787 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
275
               

               
Alignm identity:
               
211
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
29, 0
               

               
Conread position:
               
342-582
               

               
Cow position:
               
chr22:32952471-32952239 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
244
               

               
Alignm identity:
               
175
               

               
Alignm E-value:
               
9e-31
               

               
Alignm gaps (pig, cow):
               
64, 21
               

               
Conread position:
               
349-623
               

               
Cow position:
               
chr22:30107157-30106891 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
279
               

               
Alignm identity:
               
190
               

               
Alignm E-value:
               
2e-26
               

               
Alignm gaps (pig, cow):
               
13, 110
               

               
Conread position:
               
350-513
               

               
Cow position:
               
chr22:26123338-26123502 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
167
               

               
Alignm identity:
               
131
               

               
Alignm E-value:
               
1e-31
               

               
Alignm gaps (pig, cow):
               
14, 121
               

               
Conread position:
               
354-605
               

               
Cow position:
               
chr22:14601486-14601252 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
252
               

               
Alignm identity:
               
185
               

               
Alignm E-value:
               
5e-36
               

               
Alignm gaps (pig, cow):
               
8, 0
               

               
Conread position:
               
359-614
               

               
Cow position:
               
chr22:13242419-13242165 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
261
               

               
Alignm identity:
               
183
               

               
Alignm E-value:
               
4e-33
               

               
Alignm gaps (pig, cow):
               
101, 13
               

               
Conread position:
               
361-612
               

               
Cow position:
               
chr22:30689610-30689362 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
252
               

               
Alignm identity:
               
194
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
47, 0
               

               
Conread position:
               
362-647
               

               
Cow position:
               
chr22:19848420-19848700 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
288
               

               
Alignm identity:
               
211
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
22, 10
               

               
Conread position:
               
375-547
               

               
Cow position:
               
chr22:3945139-3944970 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
175
               

               
Alignm identity:
               
138
               

               
Alignm E-value:
               
4e-34
               

               
Alignm gaps (pig, cow):
               
80, 141
               

               
Conread position:
               
377-603
               

               
Cow position:
               
chr22:30473008-30472786 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
229
               

               
Alignm identity:
               
172
               

               
Alignm E-value:
               
2e-39
               

               
Alignm gaps (pig, cow):
               
7, 120
               

               
Conread position:
               
380-593
               

               
Cow position:
               
chr22:13205881-13206095 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
216
               

               
Alignm identity:
               
154
               

               
Alignm E-value:
               
1e-31
               

               
Alignm gaps (pig, cow):
               
74, 136
               

               
Conread position:
               
380-614
               

               
Cow position:
               
chr22:3730679-3730910 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
236
               

               
Alignm identity:
               
169
               

               
Alignm E-value:
               
1e-35
               

               
Alignm gaps (pig, cow):
               
79, 60
               

               
Conread position:
               
380-617
               

               
Cow position:
               
chr22:13016837-13017055 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
238
               

               
Alignm identity:
               
178
               

               
Alignm E-value:
               
1e-35
               

               
Alignm gaps (pig, cow):
               
42, 0
               

               
Conread position:
               
381-517
               

               
Cow position:
               
chr22:3541765-3541899 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
138
               

               
Alignm identity:
               
109
               

               
Alignm E-value:
               
5e-26
               

               
Alignm gaps (pig, cow):
               
77, 107
               

               
Conread position:
               
381-584
               

               
Cow position:
               
chr22:4026563-4026367 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
204
               

               
Alignm identity:
               
158
               

               
Alignm E-value:
               
7e-39
               

               
Alignm gaps (pig, cow):
               
90, 0
               

               
Conread position:
               
382-586
               

               
Cow position:
               
chr22:2141765-2141571 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
206
               

               
Alignm identity:
               
160
               

               
Alignm E-value:
               
5e-36
               

               
Alignm gaps (pig, cow):
               
78, 20
               

               
Conread position:
               
382-600
               

               
Cow position:
               
chr22:3713221-3713009 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
220
               

               
Alignm identity:
               
166
               

               
Alignm E-value:
               
6e-38
               

               
Alignm gaps (pig, cow):
               
78, 90
               

               
Conread position:
               
383-572
               

               
Cow position:
               
chr22:22148033-22147841 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
196
               

               
Alignm identity:
               
145
               

               
Alignm E-value:
               
2e-28
               

               
Alignm gaps (pig, cow):
               
71, 56
               

               
Conread position:
               
383-590
               

               
Cow position:
               
chr22:21407758-21407556 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
209
               

               
Alignm identity:
               
143
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
77, 93
               

               
Conread position:
               
383-614
               

               
Cow position:
               
chr22:22054373-22054146 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
233
               

               
Alignm identity:
               
171
               

               
Alignm E-value:
               
2e-37
               

               
Alignm gaps (pig, cow):
               
77, 114
               

               
Conread position:
               
383-667
               

               
Cow position:
               
chr22:33949044-33949324 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
286
               

               
Alignm identity:
               
211
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
194, 131
               

               
Conread position:
               
384-537
               

               
Cow position:
               
chr22:7252688-7252842 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
156
               

               
Alignm identity:
               
130
               

               
Alignm E-value:
               
2e-37
               

               
Alignm gaps (pig, cow):
               
78, 132
               

               
Conread position:
               
384-598
               

               
Cow position:
               
chr22:19376663-19376456 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
217
               

               
Alignm identity:
               
168
               

               
Alignm E-value:
               
7e-40
               

               
Alignm gaps (pig, cow):
               
8, 118
               

               
Conread position:
               
384-602
               

               
Cow position:
               
chr22:25783969-25784182 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
221
               

               
Alignm identity:
               
153
               

               
Alignm E-value:
               
1e-23
               

               
Alignm gaps (pig, cow):
               
48, 119
               

               
Conread position:
               
388-575
               

               
Cow position:
               
chr22:12974439-12974625 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
188
               

               
Alignm identity:
               
138
               

               
Alignm E-value:
               
1e-31
               

               
Alignm gaps (pig, cow):
               
126, 0
               

               
Conread position:
               
388-606
               

               
Cow position:
               
chr22:44386456-44386661 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
219
               

               
Alignm identity:
               
166
               

               
Alignm E-value:
               
5e-36
               

               
Alignm gaps (pig, cow):
               
94, 0
               

               
Conread position:
               
390-614
               

               
Cow position:
               
chr22:11987266-11987488 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
226
               

               
Alignm identity:
               
181
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
66, 98
               

               
Conread position:
               
390-614
               

               
Cow position:
               
chr22:29398255-29398033 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
226
               

               
Alignm identity:
               
154
               

               
Alignm E-value:
               
2e-26
               

               
Alignm gaps (pig, cow):
               
65, 78
               

               
Conread position:
               
390-614
               

               
Cow position:
               
chr22:29553001-29553224 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
225
               

               
Alignm identity:
               
152
               

               
Alignm E-value:
               
2e-27
               

               
Alignm gaps (pig, cow):
               
122, 0
               

               
Conread position:
               
390-614
               

               
Cow position:
               
chr22:32210769-32210546 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
225
               

               
Alignm identity:
               
152
               

               
Alignm E-value:
               
2e-27
               

               
Alignm gaps (pig, cow):
               
124, 0
               

               
Conread position:
               
390-614
               

               
Cow position:
               
chr22:34665995-34665781 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
226
               

               
Alignm identity:
               
164
               

               
Alignm E-value:
               
2e-29
               

               
Alignm gaps (pig, cow):
               
71, 14
               

               
Conread position:
               
390-614
               

               
Cow position:
               
chr22:38549740-38549524 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
225
               

               
Alignm identity:
               
159
               

               
Alignm E-value:
               
2e-29
               

               
Alignm gaps (pig, cow):
               
115, 0
               

               
Conread position:
               
390-614
               

               
Cow position:
               
chr22:44463482-44463260 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
226
               

               
Alignm identity:
               
158
               

               
Alignm E-value:
               
3e-30
               

               
Alignm gaps (pig, cow):
               
70, 78
               

               
Conread position:
               
390-615
               

               
Cow position:
               
chr22:12736276-12736055 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
227
               

               
Alignm identity:
               
156
               

               
Alignm E-value:
               
6e-27
               

               
Alignm gaps (pig, cow):
               
64, 105
               

               
Conread position:
               
390-626
               

               
Cow position:
               
chr22:36358367-36358130 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
239
               

               
Alignm identity:
               
164
               

               
Alignm E-value:
               
3e-30
               

               
Alignm gaps (pig, cow):
               
70, 125
               

               
Conread position:
               
391-614
               

               
Cow position:
               
chr22:6204347-6204565 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
227
               

               
Alignm identity:
               
170
               

               
Alignm E-value:
               
2e-36
               

               
Alignm gaps (pig, cow):
               
67, 93
               

               
Conread position:
               
392-614
               

               
Cow position:
               
chr22:6285563-6285779 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
224
               

               
Alignm identity:
               
153
               

               
Alignm E-value:
               
4e-24
               

               
Alignm gaps (pig, cow):
               
68, 84
               

               
Conread position:
               
393-613
               

               
Cow position:
               
chr22:8767288-8767072 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
224
               

               
Alignm identity:
               
160
               

               
Alignm E-value:
               
7e-29
               

               
Alignm gaps (pig, cow):
               
58, 97
               

               
Conread position:
               
399-596
               

               
Cow position:
               
chr22:16647904-16647711 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
199
               

               
Alignm identity:
               
138
               

               
Alignm E-value:
               
4e-23
               

               
Alignm gaps (pig, cow):
               
57, 116
               

               
Conread position:
               
399-614
               

               
Cow position:
               
chr22:27701152-27700943 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
216
               

               
Alignm identity:
               
161
               

               
Alignm E-value:
               
2e-36
               

               
Alignm gaps (pig, cow):
               
103, 0
               

               
Conread position:
               
403-605
               

               
Cow position:
               
chr22:28290019-28289823 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
204
               

               
Alignm identity:
               
146
               

               
Alignm E-value:
               
6e-27
               

               
Alignm gaps (pig, cow):
               
23, 82
               

               
Conread position:
               
417-562
               

               
Cow position:
               
chr22:17339843-17339982 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
148
               

               
Alignm identity:
               
115
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
40, 72
               

               
Conread position:
               
427-613
               

               
Cow position:
               
chr22:34618643-34618463 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
187
               

               
Alignm identity:
               
144
               

               
Alignm E-value:
               
1e-34
               

               
Alignm gaps (pig, cow):
               
59, 0
               
Show alignments to all cow chromosomes.