Cow genome map
| Conread name: | Pig3-SRG8028J16 |
| Conread position: | 1-317 |
| Cow position: | chr1:52918678-52918364 (view UCSC Genome Browser custom track) |
| Alignm length: | 324 |
| Alignm identity: | 229 |
| Alignm E-value: | 1.99965e-42 |
| Alignm gaps (pig, cow): | 78, 196 |
| Conread position: | 1-337 |
| Cow position: | chr1:48245753-48246099 (view UCSC Genome Browser custom track) |
| Alignm length: | 348 |
| Alignm identity: | 238 |
| Alignm E-value: | 6.00036e-42 |
| Alignm gaps (pig, cow): | 79, 114 |
| Conread position: | 1-339 |
| Cow position: | chr1:33550860-33551205 (view UCSC Genome Browser custom track) |
| Alignm length: | 347 |
| Alignm identity: | 240 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 63, 210 |
| Conread position: | 1-342 |
| Cow position: | chr1:55276544-55276195 (view UCSC Genome Browser custom track) |
| Alignm length: | 350 |
| Alignm identity: | 232 |
| Alignm E-value: | 4e-38 |
| Alignm gaps (pig, cow): | 81, 0 |
| Conread position: | 1-342 |
| Cow position: | chr1:89770741-89770394 (view UCSC Genome Browser custom track) |
| Alignm length: | 348 |
| Alignm identity: | 237 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 103, 0 |
| Conread position: | 1-360 |
| Cow position: | chr1:85780836-85780473 (view UCSC Genome Browser custom track) |
| Alignm length: | 368 |
| Alignm identity: | 244 |
| Alignm E-value: | 4e-38 |
| Alignm gaps (pig, cow): | 63, 149 |
| Conread position: | 1-360 |
| Cow position: | chr1:86699276-86698910 (view UCSC Genome Browser custom track) |
| Alignm length: | 368 |
| Alignm identity: | 246 |
| Alignm E-value: | 7.00649e-43 |
| Alignm gaps (pig, cow): | 78, 345 |
| Conread position: | 1-367 |
| Cow position: | chr1:69536844-69537213 (view UCSC Genome Browser custom track) |
| Alignm length: | 373 |
| Alignm identity: | 247 |
| Alignm E-value: | 1.99993e-41 |
| Alignm gaps (pig, cow): | 84, 117 |
| Conread position: | 1-373 |
| Cow position: | chr1:40053297-40053681 (view UCSC Genome Browser custom track) |
| Alignm length: | 385 |
| Alignm identity: | 256 |
| Alignm E-value: | 1.99993e-41 |
| Alignm gaps (pig, cow): | 84, 0 |
| Conread position: | 1-373 |
| Cow position: | chr1:61308944-61309328 (view UCSC Genome Browser custom track) |
| Alignm length: | 385 |
| Alignm identity: | 261 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 81, 0 |
| Conread position: | 1-388 |
| Cow position: | chr1:99021015-99020623 (view UCSC Genome Browser custom track) |
| Alignm length: | 403 |
| Alignm identity: | 314 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 25, 68 |
| Conread position: | 1-399 |
| Cow position: | chr1:31422302-31421933 (view UCSC Genome Browser custom track) |
| Alignm length: | 402 |
| Alignm identity: | 292 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 346, 55 |
| Conread position: | 1-399 |
| Cow position: | chr1:72136581-72136988 (view UCSC Genome Browser custom track) |
| Alignm length: | 409 |
| Alignm identity: | 280 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 70, 98 |
| Conread position: | 1-405 |
| Cow position: | chr1:69766404-69766816 (view UCSC Genome Browser custom track) |
| Alignm length: | 417 |
| Alignm identity: | 276 |
| Alignm E-value: | 6.00036e-42 |
| Alignm gaps (pig, cow): | 24, 31 |
| Conread position: | 1-537 |
| Cow position: | chr1:80556113-80555606 (view UCSC Genome Browser custom track) |
| Alignm length: | 542 |
| Alignm identity: | 399 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 330, 67 |
| Conread position: | 1-551 |
| Cow position: | chr1:44101803-44101269 (view UCSC Genome Browser custom track) |
| Alignm length: | 562 |
| Alignm identity: | 422 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 69, 44 |
| Conread position: | 1-551 |
| Cow position: | chr1:46835467-46836037 (view UCSC Genome Browser custom track) |
| Alignm length: | 580 |
| Alignm identity: | 412 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 81, 38 |
| Conread position: | 1-554 |
| Cow position: | chr1:63501400-63501953 (view UCSC Genome Browser custom track) |
| Alignm length: | 570 |
| Alignm identity: | 429 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 105, 67 |
| Conread position: | 1-555 |
| Cow position: | chr1:32342133-32341561 (view UCSC Genome Browser custom track) |
| Alignm length: | 581 |
| Alignm identity: | 415 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 74, 414 |
| Conread position: | 2-374 |
| Cow position: | chr1:67901975-67901605 (view UCSC Genome Browser custom track) |
| Alignm length: | 383 |
| Alignm identity: | 256 |
| Alignm E-value: | 9e-35 |
| Alignm gaps (pig, cow): | 102, 23 |
| Conread position: | 2-419 |
| Cow position: | chr1:21356677-21356281 (view UCSC Genome Browser custom track) |
| Alignm length: | 420 |
| Alignm identity: | 310 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 219, 24 |
| Conread position: | 2-553 |
| Cow position: | chr1:18014247-18013698 (view UCSC Genome Browser custom track) |
| Alignm length: | 562 |
| Alignm identity: | 379 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 73, 367 |
| Conread position: | 2-554 |
| Cow position: | chr1:82355674-82356219 (view UCSC Genome Browser custom track) |
| Alignm length: | 566 |
| Alignm identity: | 421 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 329, 45 |
| Conread position: | 2-555 |
| Cow position: | chr1:30058486-30059039 (view UCSC Genome Browser custom track) |
| Alignm length: | 570 |
| Alignm identity: | 388 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 39, 10 |
| Conread position: | 3-421 |
| Cow position: | chr1:19992736-19992319 (view UCSC Genome Browser custom track) |
| Alignm length: | 424 |
| Alignm identity: | 339 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 107, 36 |
| Conread position: | 3-551 |
| Cow position: | chr1:61738562-61738025 (view UCSC Genome Browser custom track) |
| Alignm length: | 552 |
| Alignm identity: | 419 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 341, 65 |
| Conread position: | 5-421 |
| Cow position: | chr1:39482035-39481610 (view UCSC Genome Browser custom track) |
| Alignm length: | 426 |
| Alignm identity: | 325 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 70, 0 |
| Conread position: | 9-377 |
| Cow position: | chr1:5318710-5319071 (view UCSC Genome Browser custom track) |
| Alignm length: | 380 |
| Alignm identity: | 257 |
| Alignm E-value: | 7e-33 |
| Alignm gaps (pig, cow): | 10, 17 |
| Conread position: | 20-537 |
| Cow position: | chr1:99374928-99375440 (view UCSC Genome Browser custom track) |
| Alignm length: | 528 |
| Alignm identity: | 374 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 191, 48 |
| Conread position: | 36-564 |
| Cow position: | chr1:77655684-77656208 (view UCSC Genome Browser custom track) |
| Alignm length: | 538 |
| Alignm identity: | 389 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 81, 44 |
| Conread position: | 116-554 |
| Cow position: | chr1:98865092-98864659 (view UCSC Genome Browser custom track) |
| Alignm length: | 445 |
| Alignm identity: | 330 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 148, 287 |
| Conread position: | 137-357 |
| Cow position: | chr1:38396310-38396538 (view UCSC Genome Browser custom track) |
| Alignm length: | 230 |
| Alignm identity: | 178 |
| Alignm E-value: | 7.00649e-43 |
| Alignm gaps (pig, cow): | 57, 124 |
| Conread position: | 137-419 |
| Cow position: | chr1:44138263-44137977 (view UCSC Genome Browser custom track) |
| Alignm length: | 291 |
| Alignm identity: | 228 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 127, 27 |
| Conread position: | 344-547 |
| Cow position: | chr1:33389013-33389214 (view UCSC Genome Browser custom track) |
| Alignm length: | 206 |
| Alignm identity: | 159 |
| Alignm E-value: | 1e-38 |
| Alignm gaps (pig, cow): | 69, 108 |
Show alignments to all cow chromosomes.