Cow genome map
| Conread name: | Pig3-SRG8028J16 |
| Conread position: | 1-318 |
| Cow position: | chr5:1342074-1341755 (view UCSC Genome Browser custom track) |
| Alignm length: | 322 |
| Alignm identity: | 223 |
| Alignm E-value: | 5.60519e-45 |
| Alignm gaps (pig, cow): | 63, 241 |
| Conread position: | 1-319 |
| Cow position: | chr5:39165078-39164756 (view UCSC Genome Browser custom track) |
| Alignm length: | 325 |
| Alignm identity: | 227 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 85, 166 |
| Conread position: | 1-360 |
| Cow position: | chr5:30579042-30579407 (view UCSC Genome Browser custom track) |
| Alignm length: | 368 |
| Alignm identity: | 249 |
| Alignm E-value: | 1.96182e-44 |
| Alignm gaps (pig, cow): | 63, 49 |
| Conread position: | 1-364 |
| Cow position: | chr5:64782299-64781923 (view UCSC Genome Browser custom track) |
| Alignm length: | 377 |
| Alignm identity: | 259 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 63, 0 |
| Conread position: | 1-394 |
| Cow position: | chr5:28022880-28023276 (view UCSC Genome Browser custom track) |
| Alignm length: | 401 |
| Alignm identity: | 304 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 105, 67 |
| Conread position: | 1-547 |
| Cow position: | chr5:49101354-49101906 (view UCSC Genome Browser custom track) |
| Alignm length: | 571 |
| Alignm identity: | 376 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 160, 42 |
| Conread position: | 2-324 |
| Cow position: | chr5:6158474-6158149 (view UCSC Genome Browser custom track) |
| Alignm length: | 330 |
| Alignm identity: | 218 |
| Alignm E-value: | 1e-31 |
| Alignm gaps (pig, cow): | 62, 138 |
| Conread position: | 5-475 |
| Cow position: | chr5:58334860-58334383 (view UCSC Genome Browser custom track) |
| Alignm length: | 488 |
| Alignm identity: | 347 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 263, 71 |
| Conread position: | 10-341 |
| Cow position: | chr5:51319518-51319185 (view UCSC Genome Browser custom track) |
| Alignm length: | 343 |
| Alignm identity: | 243 |
| Alignm E-value: | 6.02558e-44 |
| Alignm gaps (pig, cow): | 60, 143 |
| Conread position: | 23-399 |
| Cow position: | chr5:46630699-46630314 (view UCSC Genome Browser custom track) |
| Alignm length: | 388 |
| Alignm identity: | 246 |
| Alignm E-value: | 1e-29 |
| Alignm gaps (pig, cow): | 46, 349 |
| Conread position: | 25-360 |
| Cow position: | chr5:49128974-49129308 (view UCSC Genome Browser custom track) |
| Alignm length: | 348 |
| Alignm identity: | 244 |
| Alignm E-value: | 1e-39 |
| Alignm gaps (pig, cow): | 101, 39 |
| Conread position: | 68-558 |
| Cow position: | chr5:24108801-24108308 (view UCSC Genome Browser custom track) |
| Alignm length: | 503 |
| Alignm identity: | 386 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 36, 232 |
| Conread position: | 180-340 |
| Cow position: | chr5:31915872-31916034 (view UCSC Genome Browser custom track) |
| Alignm length: | 167 |
| Alignm identity: | 125 |
| Alignm E-value: | 2e-22 |
| Alignm gaps (pig, cow): | 14, 9 |
| Conread position: | 244-551 |
| Cow position: | chr5:28570566-28570880 (view UCSC Genome Browser custom track) |
| Alignm length: | 323 |
| Alignm identity: | 233 |
| Alignm E-value: | 4.99983e-42 |
| Alignm gaps (pig, cow): | 24, 62 |
| Conread position: | 305-537 |
| Cow position: | chr5:58055443-58055211 (view UCSC Genome Browser custom track) |
| Alignm length: | 237 |
| Alignm identity: | 182 |
| Alignm E-value: | 5.60519e-45 |
| Alignm gaps (pig, cow): | 26, 129 |
| Conread position: | 367-555 |
| Cow position: | chr5:41358390-41358200 (view UCSC Genome Browser custom track) |
| Alignm length: | 192 |
| Alignm identity: | 150 |
| Alignm E-value: | 3e-38 |
| Alignm gaps (pig, cow): | 5, 187 |
| Conread position: | 382-555 |
| Cow position: | chr5:39872488-39872658 (view UCSC Genome Browser custom track) |
| Alignm length: | 176 |
| Alignm identity: | 135 |
| Alignm E-value: | 4e-30 |
| Alignm gaps (pig, cow): | 31, 87 |
Show alignments to all cow chromosomes.