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Cow genome map

           
Conread name:
           
Pig4-TMW8001P16
        

               
Conread position:
               
1-153
               

               
Cow position:
               
chr27:1884237-1884082 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
156
               

               
Alignm identity:
               
126
               

               
Alignm E-value:
               
5e-34
               

               
Alignm gaps (pig, cow):
               
13, 0
               

               
Conread position:
               
1-159
               

               
Cow position:
               
chr27:9978026-9977855 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
173
               

               
Alignm identity:
               
134
               

               
Alignm E-value:
               
3e-27
               

               
Alignm gaps (pig, cow):
               
13, 94
               

               
Conread position:
               
1-173
               

               
Cow position:
               
chr27:26163577-26163409 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
178
               

               
Alignm identity:
               
132
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
6, 43
               

               
Conread position:
               
1-176
               

               
Cow position:
               
chr27:21418867-21419047 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
181
               

               
Alignm identity:
               
132
               

               
Alignm E-value:
               
2e-26
               

               
Alignm gaps (pig, cow):
               
14, 0
               

               
Conread position:
               
1-179
               

               
Cow position:
               
chr27:22179598-22179775 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
182
               

               
Alignm identity:
               
141
               

               
Alignm E-value:
               
1e-32
               

               
Alignm gaps (pig, cow):
               
16, 98
               

               
Conread position:
               
1-182
               

               
Cow position:
               
chr27:28164212-28164390 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
184
               

               
Alignm identity:
               
143
               

               
Alignm E-value:
               
2e-34
               

               
Alignm gaps (pig, cow):
               
6, 49
               

               
Conread position:
               
1-184
               

               
Cow position:
               
chr27:18030860-18031049 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
193
               

               
Alignm identity:
               
154
               

               
Alignm E-value:
               
2e-36
               

               
Alignm gaps (pig, cow):
               
6, 23
               

               
Conread position:
               
1-205
               

               
Cow position:
               
chr27:16871720-16871921 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
207
               

               
Alignm identity:
               
147
               

               
Alignm E-value:
               
8e-27
               

               
Alignm gaps (pig, cow):
               
36, 14
               

               
Conread position:
               
1-208
               

               
Cow position:
               
chr27:22498752-22498546 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
211
               

               
Alignm identity:
               
160
               

               
Alignm E-value:
               
8e-38
               

               
Alignm gaps (pig, cow):
               
16, 83
               

               
Conread position:
               
1-256
               

               
Cow position:
               
chr27:1183677-1183941 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
270
               

               
Alignm identity:
               
206
               

               
Alignm E-value:
               
1.00053e-42
               

               
Alignm gaps (pig, cow):
               
12, 51
               

               
Conread position:
               
1-257
               

               
Cow position:
               
chr27:25791003-25790746 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
261
               

               
Alignm identity:
               
198
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
10, 213
               

               
Conread position:
               
1-259
               

               
Cow position:
               
chr27:27141791-27141542 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
260
               

               
Alignm identity:
               
191
               

               
Alignm E-value:
               
9.99967e-42
               

               
Alignm gaps (pig, cow):
               
36, 16
               

               
Conread position:
               
1-260
               

               
Cow position:
               
chr27:6058701-6058442 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
268
               

               
Alignm identity:
               
202
               

               
Alignm E-value:
               
5.04467e-44
               

               
Alignm gaps (pig, cow):
               
36, 183
               

               
Conread position:
               
1-263
               

               
Cow position:
               
chr27:27259807-27259550 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
265
               

               
Alignm identity:
               
204
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
36, 181
               

               
Conread position:
               
1-269
               

               
Cow position:
               
chr27:29283211-29283478 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
272
               

               
Alignm identity:
               
204
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
34, 15
               

               
Conread position:
               
1-270
               

               
Cow position:
               
chr27:6523245-6522973 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
283
               

               
Alignm identity:
               
218
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
14, 104
               

               
Conread position:
               
1-271
               

               
Cow position:
               
chr27:24445957-24446229 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
277
               

               
Alignm identity:
               
199
               

               
Alignm E-value:
               
3e-40
               

               
Alignm gaps (pig, cow):
               
13, 150
               

               
Conread position:
               
1-276
               

               
Cow position:
               
chr27:13198115-13197828 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
297
               

               
Alignm identity:
               
216
               

               
Alignm E-value:
               
2e-35
               

               
Alignm gaps (pig, cow):
               
18, 13
               

               
Conread position:
               
1-276
               

               
Cow position:
               
chr27:23070161-23070436 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
282
               

               
Alignm identity:
               
210
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
36, 102
               

               
Conread position:
               
1-292
               

               
Cow position:
               
chr27:31372780-31373075 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
299
               

               
Alignm identity:
               
220
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
14, 138
               

               
Conread position:
               
1-304
               

               
Cow position:
               
chr27:26224070-26224375 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
312
               

               
Alignm identity:
               
216
               

               
Alignm E-value:
               
2e-35
               

               
Alignm gaps (pig, cow):
               
6, 24
               

               
Conread position:
               
1-305
               

               
Cow position:
               
chr27:8962070-8962363 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
311
               

               
Alignm identity:
               
226
               

               
Alignm E-value:
               
9.99995e-41
               

               
Alignm gaps (pig, cow):
               
10, 61
               

               
Conread position:
               
1-306
               

               
Cow position:
               
chr27:27003082-27003366 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
310
               

               
Alignm identity:
               
223
               

               
Alignm E-value:
               
2e-36
               

               
Alignm gaps (pig, cow):
               
14, 75
               

               
Conread position:
               
1-308
               

               
Cow position:
               
chr27:28518484-28518187 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
312
               

               
Alignm identity:
               
245
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
36, 82
               

               
Conread position:
               
1-309
               

               
Cow position:
               
chr27:3988809-3988496 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
318
               

               
Alignm identity:
               
210
               

               
Alignm E-value:
               
3e-29
               

               
Alignm gaps (pig, cow):
               
25, 201
               

               
Conread position:
               
1-309
               

               
Cow position:
               
chr27:9988906-9988600 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
314
               

               
Alignm identity:
               
201
               

               
Alignm E-value:
               
5e-23
               

               
Alignm gaps (pig, cow):
               
14, 33
               

               
Conread position:
               
1-309
               

               
Cow position:
               
chr27:11081395-11081091 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
315
               

               
Alignm identity:
               
222
               

               
Alignm E-value:
               
1e-39
               

               
Alignm gaps (pig, cow):
               
6, 30
               

               
Conread position:
               
1-309
               

               
Cow position:
               
chr27:14129702-14129392 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
316
               

               
Alignm identity:
               
209
               

               
Alignm E-value:
               
1e-29
               

               
Alignm gaps (pig, cow):
               
21, 28
               

               
Conread position:
               
1-309
               

               
Cow position:
               
chr27:14906930-14906618 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
316
               

               
Alignm identity:
               
201
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
37, 195
               

               
Conread position:
               
1-309
               

               
Cow position:
               
chr27:19931352-19931044 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
315
               

               
Alignm identity:
               
201
               

               
Alignm E-value:
               
5e-23
               

               
Alignm gaps (pig, cow):
               
37, 227
               

               
Conread position:
               
1-309
               

               
Cow position:
               
chr27:20354779-20354487 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
312
               

               
Alignm identity:
               
238
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
13, 72
               

               
Conread position:
               
1-309
               

               
Cow position:
               
chr27:21452871-21453204 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
334
               

               
Alignm identity:
               
244
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
36, 0
               

               
Conread position:
               
1-309
               

               
Cow position:
               
chr27:28984742-28985051 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
314
               

               
Alignm identity:
               
204
               

               
Alignm E-value:
               
3e-28
               

               
Alignm gaps (pig, cow):
               
14, 33
               

               
Conread position:
               
1-310
               

               
Cow position:
               
chr27:23576340-23576650 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
319
               

               
Alignm identity:
               
216
               

               
Alignm E-value:
               
4e-31
               

               
Alignm gaps (pig, cow):
               
6, 108
               

               
Conread position:
               
1-310
               

               
Cow position:
               
chr27:24999535-24999851 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
319
               

               
Alignm identity:
               
242
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
13, 225
               

               
Conread position:
               
1-312
               

               
Cow position:
               
chr27:24331925-24331608 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
321
               

               
Alignm identity:
               
234
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
10, 222
               

               
Conread position:
               
1-314
               

               
Cow position:
               
chr27:12429607-12429292 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
326
               

               
Alignm identity:
               
252
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
36, 189
               

               
Conread position:
               
1-315
               

               
Cow position:
               
chr27:24227594-24227915 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
329
               

               
Alignm identity:
               
243
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
11, 172
               

               
Conread position:
               
1-317
               

               
Cow position:
               
chr27:19577873-19577558 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
324
               

               
Alignm identity:
               
220
               

               
Alignm E-value:
               
2e-33
               

               
Alignm gaps (pig, cow):
               
38, 135
               

               
Conread position:
               
1-317
               

               
Cow position:
               
chr27:22454580-22454893 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
323
               

               
Alignm identity:
               
255
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
16, 85
               

               
Conread position:
               
1-318
               

               
Cow position:
               
chr27:16787026-16786710 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
326
               

               
Alignm identity:
               
233
               

               
Alignm E-value:
               
1.4013e-45
               

               
Alignm gaps (pig, cow):
               
6, 172
               

               
Conread position:
               
1-318
               

               
Cow position:
               
chr27:21408353-21408682 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
330
               

               
Alignm identity:
               
239
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
8, 0
               

               
Conread position:
               
1-319
               

               
Cow position:
               
chr27:1123221-1122912 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
325
               

               
Alignm identity:
               
231
               

               
Alignm E-value:
               
3.99931e-42
               

               
Alignm gaps (pig, cow):
               
13, 37
               

               
Conread position:
               
1-319
               

               
Cow position:
               
chr27:1498513-1498196 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
322
               

               
Alignm identity:
               
225
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
11, 59
               

               
Conread position:
               
1-319
               

               
Cow position:
               
chr27:6500264-6499941 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
328
               

               
Alignm identity:
               
246
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
6, 214
               

               
Conread position:
               
1-319
               

               
Cow position:
               
chr27:15668568-15668891 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
326
               

               
Alignm identity:
               
232
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
36, 203
               

               
Conread position:
               
1-319
               

               
Cow position:
               
chr27:22171497-22171180 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
323
               

               
Alignm identity:
               
240
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
8, 21
               

               
Conread position:
               
1-319
               

               
Cow position:
               
chr27:22723507-22723813 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
324
               

               
Alignm identity:
               
234
               

               
Alignm E-value:
               
1.96182e-44
               

               
Alignm gaps (pig, cow):
               
12, 98
               

               
Conread position:
               
1-319
               

               
Cow position:
               
chr27:24014542-24014859 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
322
               

               
Alignm identity:
               
230
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
36, 165
               

               
Conread position:
               
1-319
               

               
Cow position:
               
chr27:25809324-25809635 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
323
               

               
Alignm identity:
               
238
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
36, 70
               

               
Conread position:
               
1-319
               

               
Cow position:
               
chr27:26919713-26920031 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
333
               

               
Alignm identity:
               
231
               

               
Alignm E-value:
               
2e-33
               

               
Alignm gaps (pig, cow):
               
13, 76
               

               
Conread position:
               
1-319
               

               
Cow position:
               
chr27:26999225-26999542 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
324
               

               
Alignm identity:
               
214
               

               
Alignm E-value:
               
4e-32
               

               
Alignm gaps (pig, cow):
               
11, 73
               

               
Conread position:
               
1-319
               

               
Cow position:
               
chr27:27019901-27020217 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
326
               

               
Alignm identity:
               
242
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
6, 246
               

               
Conread position:
               
1-319
               

               
Cow position:
               
chr27:27053496-27053176 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
327
               

               
Alignm identity:
               
214
               

               
Alignm E-value:
               
3e-27
               

               
Alignm gaps (pig, cow):
               
10, 60
               

               
Conread position:
               
1-319
               

               
Cow position:
               
chr27:27136326-27136640 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
323
               

               
Alignm identity:
               
216
               

               
Alignm E-value:
               
2e-33
               

               
Alignm gaps (pig, cow):
               
10, 21
               

               
Conread position:
               
1-319
               

               
Cow position:
               
chr27:29831489-29831817 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
333
               

               
Alignm identity:
               
245
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
37, 21
               

               
Conread position:
               
1-319
               

               
Cow position:
               
chr27:30406832-30407157 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
330
               

               
Alignm identity:
               
232
               

               
Alignm E-value:
               
5.00264e-43
               

               
Alignm gaps (pig, cow):
               
11, 193
               

               
Conread position:
               
1-319
               

               
Cow position:
               
chr27:30582937-30582615 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
327
               

               
Alignm identity:
               
235
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
13, 91
               

               
Conread position:
               
1-320
               

               
Cow position:
               
chr27:12516398-12516073 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
330
               

               
Alignm identity:
               
242
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
13, 196
               

               
Conread position:
               
1-321
               

               
Cow position:
               
chr27:10307096-10307419 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
334
               

               
Alignm identity:
               
249
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
14, 103
               

               
Conread position:
               
1-322
               

               
Cow position:
               
chr27:8942484-8942812 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
331
               

               
Alignm identity:
               
243
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
9, 108
               

               
Conread position:
               
1-322
               

               
Cow position:
               
chr27:12596955-12596654 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
325
               

               
Alignm identity:
               
242
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
36, 13
               

               
Conread position:
               
1-323
               

               
Cow position:
               
chr27:536656-536339 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
326
               

               
Alignm identity:
               
232
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
13, 32
               

               
Conread position:
               
1-323
               

               
Cow position:
               
chr27:16284671-16284351 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
329
               

               
Alignm identity:
               
232
               

               
Alignm E-value:
               
5.60519e-45
               

               
Alignm gaps (pig, cow):
               
36, 180
               

               
Conread position:
               
1-324
               

               
Cow position:
               
chr27:6074115-6073807 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
326
               

               
Alignm identity:
               
228
               

               
Alignm E-value:
               
3e-40
               

               
Alignm gaps (pig, cow):
               
36, 74
               

               
Conread position:
               
1-325
               

               
Cow position:
               
chr27:2930397-2930714 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
331
               

               
Alignm identity:
               
238
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
6, 197
               

               
Conread position:
               
1-325
               

               
Cow position:
               
chr27:4673220-4672887 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
334
               

               
Alignm identity:
               
241
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
10, 0
               

               
Conread position:
               
1-325
               

               
Cow position:
               
chr27:8062159-8062476 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
330
               

               
Alignm identity:
               
239
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
36, 13
               

               
Conread position:
               
1-325
               

               
Cow position:
               
chr27:20283830-20283510 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
335
               

               
Alignm identity:
               
242
               

               
Alignm E-value:
               
5.60519e-45
               

               
Alignm gaps (pig, cow):
               
36, 65
               

               
Conread position:
               
1-325
               

               
Cow position:
               
chr27:22603362-22603060 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
328
               

               
Alignm identity:
               
234
               

               
Alignm E-value:
               
9e-39
               

               
Alignm gaps (pig, cow):
               
21, 75
               

               
Conread position:
               
1-325
               

               
Cow position:
               
chr27:26807364-26807691 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
330
               

               
Alignm identity:
               
225
               

               
Alignm E-value:
               
3.99931e-42
               

               
Alignm gaps (pig, cow):
               
6, 207
               

               
Conread position:
               
1-325
               

               
Cow position:
               
chr27:28206997-28206676 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
332
               

               
Alignm identity:
               
233
               

               
Alignm E-value:
               
1.00053e-42
               

               
Alignm gaps (pig, cow):
               
10, 167
               

               
Conread position:
               
1-325
               

               
Cow position:
               
chr27:31230895-31231207 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
327
               

               
Alignm identity:
               
221
               

               
Alignm E-value:
               
5e-34
               

               
Alignm gaps (pig, cow):
               
37, 153
               

               
Conread position:
               
1-329
               

               
Cow position:
               
chr27:20765764-20766088 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
334
               

               
Alignm identity:
               
222
               

               
Alignm E-value:
               
1e-32
               

               
Alignm gaps (pig, cow):
               
14, 85
               

               
Conread position:
               
1-329
               

               
Cow position:
               
chr27:30354146-30354474 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
331
               

               
Alignm identity:
               
250
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
36, 15
               

               
Conread position:
               
1-334
               

               
Cow position:
               
chr27:23632799-23632465 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
345
               

               
Alignm identity:
               
256
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
8, 29
               

               
Conread position:
               
1-334
               

               
Cow position:
               
chr27:30359594-30359272 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
335
               

               
Alignm identity:
               
253
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
10, 41
               

               
Conread position:
               
1-338
               

               
Cow position:
               
chr27:23930163-23929831 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
348
               

               
Alignm identity:
               
248
               

               
Alignm E-value:
               
2.00386e-43
               

               
Alignm gaps (pig, cow):
               
36, 82
               

               
Conread position:
               
1-356
               

               
Cow position:
               
chr27:30765231-30764875 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
364
               

               
Alignm identity:
               
273
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
9, 87
               

               
Conread position:
               
1-363
               

               
Cow position:
               
chr27:7934964-7935313 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
369
               

               
Alignm identity:
               
264
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
13, 103
               

               
Conread position:
               
1-363
               

               
Cow position:
               
chr27:12246859-12246498 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
375
               

               
Alignm identity:
               
275
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
14, 104
               

               
Conread position:
               
1-363
               

               
Cow position:
               
chr27:13317755-13318130 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
384
               

               
Alignm identity:
               
269
               

               
Alignm E-value:
               
1.96182e-44
               

               
Alignm gaps (pig, cow):
               
13, 342
               

               
Conread position:
               
1-363
               

               
Cow position:
               
chr27:27038645-27038993 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
366
               

               
Alignm identity:
               
265
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
36, 76
               

               
Conread position:
               
1-363
               

               
Cow position:
               
chr27:27640793-27641166 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
384
               

               
Alignm identity:
               
293
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
36, 317
               

               
Conread position:
               
1-363
               

               
Cow position:
               
chr27:30868541-30868904 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
370
               

               
Alignm identity:
               
274
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
37, 17
               

               
Conread position:
               
1-364
               

               
Cow position:
               
chr27:25277335-25276986 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
369
               

               
Alignm identity:
               
282
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
36, 75
               

               
Conread position:
               
1-367
               

               
Cow position:
               
chr27:25783801-25783466 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
370
               

               
Alignm identity:
               
261
               

               
Alignm E-value:
               
3e-40
               

               
Alignm gaps (pig, cow):
               
37, 106
               

               
Conread position:
               
1-372
               

               
Cow position:
               
chr27:26581247-26581601 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
379
               

               
Alignm identity:
               
265
               

               
Alignm E-value:
               
4.00001e-41
               

               
Alignm gaps (pig, cow):
               
6, 72
               

               
Conread position:
               
1-393
               

               
Cow position:
               
chr27:24321387-24321002 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
400
               

               
Alignm identity:
               
272
               

               
Alignm E-value:
               
5.00264e-43
               

               
Alignm gaps (pig, cow):
               
36, 15
               

               
Conread position:
               
2-244
               

               
Cow position:
               
chr27:22330472-22330718 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
248
               

               
Alignm identity:
               
177
               

               
Alignm E-value:
               
7e-36
               

               
Alignm gaps (pig, cow):
               
35, 80
               

               
Conread position:
               
2-276
               

               
Cow position:
               
chr27:732768-732498 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
279
               

               
Alignm identity:
               
202
               

               
Alignm E-value:
               
9.99995e-41
               

               
Alignm gaps (pig, cow):
               
35, 20
               

               
Conread position:
               
2-307
               

               
Cow position:
               
chr27:14670184-14670490 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
313
               

               
Alignm identity:
               
221
               

               
Alignm E-value:
               
3.99931e-42
               

               
Alignm gaps (pig, cow):
               
35, 15
               

               
Conread position:
               
2-309
               

               
Cow position:
               
chr27:2390493-2390182 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
318
               

               
Alignm identity:
               
209
               

               
Alignm E-value:
               
7e-26
               

               
Alignm gaps (pig, cow):
               
13, 224
               

               
Conread position:
               
2-311
               

               
Cow position:
               
chr27:30362441-30362142 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
312
               

               
Alignm identity:
               
237
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
13, 160
               

               
Conread position:
               
2-312
               

               
Cow position:
               
chr27:4829609-4829924 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
324
               

               
Alignm identity:
               
224
               

               
Alignm E-value:
               
2e-34
               

               
Alignm gaps (pig, cow):
               
13, 72
               

               
Conread position:
               
2-316
               

               
Cow position:
               
chr27:25380189-25379871 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
322
               

               
Alignm identity:
               
253
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
13, 98
               

               
Conread position:
               
2-318
               

               
Cow position:
               
chr27:26785782-26786109 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
332
               

               
Alignm identity:
               
227
               

               
Alignm E-value:
               
2e-33
               

               
Alignm gaps (pig, cow):
               
35, 143
               

               
Conread position:
               
2-319
               

               
Cow position:
               
chr27:18558561-18558241 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
326
               

               
Alignm identity:
               
242
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
35, 117
               

               
Conread position:
               
2-319
               

               
Cow position:
               
chr27:27245154-27245474 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
322
               

               
Alignm identity:
               
211
               

               
Alignm E-value:
               
6e-35
               

               
Alignm gaps (pig, cow):
               
84, 237
               

               
Conread position:
               
2-324
               

               
Cow position:
               
chr27:13875930-13875609 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
331
               

               
Alignm identity:
               
243
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
12, 22
               

               
Conread position:
               
2-325
               

               
Cow position:
               
chr27:17397251-17397580 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
332
               

               
Alignm identity:
               
241
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
36, 12
               

               
Conread position:
               
2-363
               

               
Cow position:
               
chr27:13411160-13411524 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
378
               

               
Alignm identity:
               
267
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
35, 14
               

               
Conread position:
               
2-363
               

               
Cow position:
               
chr27:28018535-28018170 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
372
               

               
Alignm identity:
               
260
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
10, 191
               

               
Conread position:
               
2-363
               

               
Cow position:
               
chr27:30915200-30914854 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
365
               

               
Alignm identity:
               
268
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
5, 82
               

               
Conread position:
               
3-242
               

               
Cow position:
               
chr27:30843881-30844121 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
247
               

               
Alignm identity:
               
182
               

               
Alignm E-value:
               
7e-36
               

               
Alignm gaps (pig, cow):
               
9, 72
               

               
Conread position:
               
3-265
               

               
Cow position:
               
chr27:14902452-14902719 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
271
               

               
Alignm identity:
               
219
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
34, 114
               

               
Conread position:
               
3-283
               

               
Cow position:
               
chr27:26424390-26424670 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
287
               

               
Alignm identity:
               
193
               

               
Alignm E-value:
               
8e-27
               

               
Alignm gaps (pig, cow):
               
34, 27
               

               
Conread position:
               
3-318
               

               
Cow position:
               
chr27:22426633-22426951 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
322
               

               
Alignm identity:
               
228
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
22, 11
               

               
Conread position:
               
3-319
               

               
Cow position:
               
chr27:4812680-4813003 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
325
               

               
Alignm identity:
               
238
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
34, 209
               

               
Conread position:
               
3-320
               

               
Cow position:
               
chr27:15315688-15315398 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
320
               

               
Alignm identity:
               
226
               

               
Alignm E-value:
               
1e-31
               

               
Alignm gaps (pig, cow):
               
34, 11
               

               
Conread position:
               
4-319
               

               
Cow position:
               
chr27:15867587-15867270 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
328
               

               
Alignm identity:
               
243
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
9, 56
               

               
Conread position:
               
4-320
               

               
Cow position:
               
chr27:28921701-28922013 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
324
               

               
Alignm identity:
               
244
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
33, 99
               

               
Conread position:
               
6-182
               

               
Cow position:
               
chr27:22771951-22771767 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
185
               

               
Alignm identity:
               
147
               

               
Alignm E-value:
               
2e-37
               

               
Alignm gaps (pig, cow):
               
31, 0
               

               
Conread position:
               
6-234
               

               
Cow position:
               
chr27:20592177-20591945 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
234
               

               
Alignm identity:
               
180
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
31, 224
               

               
Conread position:
               
6-260
               

               
Cow position:
               
chr27:8291818-8292062 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
258
               

               
Alignm identity:
               
190
               

               
Alignm E-value:
               
2e-36
               

               
Alignm gaps (pig, cow):
               
31, 96
               

               
Conread position:
               
6-309
               

               
Cow position:
               
chr27:26427935-26428242 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
313
               

               
Alignm identity:
               
244
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
32, 193
               

               
Conread position:
               
6-318
               

               
Cow position:
               
chr27:11296451-11296151 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
319
               

               
Alignm identity:
               
235
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
31, 121
               

               
Conread position:
               
6-318
               

               
Cow position:
               
chr27:15871355-15871042 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
323
               

               
Alignm identity:
               
231
               

               
Alignm E-value:
               
2.00386e-43
               

               
Alignm gaps (pig, cow):
               
31, 63
               

               
Conread position:
               
7-146
               

               
Cow position:
               
chr27:2848083-2847945 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
141
               

               
Alignm identity:
               
107
               

               
Alignm E-value:
               
5e-23
               

               
Alignm gaps (pig, cow):
               
30, 49
               

               
Conread position:
               
7-312
               

               
Cow position:
               
chr27:27683924-27684228 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
313
               

               
Alignm identity:
               
216
               

               
Alignm E-value:
               
2e-36
               

               
Alignm gaps (pig, cow):
               
43, 32
               

               
Conread position:
               
7-317
               

               
Cow position:
               
chr27:707140-706835 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
314
               

               
Alignm identity:
               
229
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
30, 52
               

               
Conread position:
               
7-325
               

               
Cow position:
               
chr27:21393311-21393633 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
329
               

               
Alignm identity:
               
254
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
10, 98
               

               
Conread position:
               
8-182
               

               
Cow position:
               
chr27:25411328-25411503 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
178
               

               
Alignm identity:
               
134
               

               
Alignm E-value:
               
3e-30
               

               
Alignm gaps (pig, cow):
               
29, 77
               

               
Conread position:
               
8-208
               

               
Cow position:
               
chr27:23659149-23659347 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
205
               

               
Alignm identity:
               
147
               

               
Alignm E-value:
               
2e-25
               

               
Alignm gaps (pig, cow):
               
29, 87
               

               
Conread position:
               
8-307
               

               
Cow position:
               
chr27:6454406-6454100 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
308
               

               
Alignm identity:
               
210
               

               
Alignm E-value:
               
2e-37
               

               
Alignm gaps (pig, cow):
               
29, 121
               

               
Conread position:
               
8-307
               

               
Cow position:
               
chr27:27554495-27554788 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
303
               

               
Alignm identity:
               
208
               

               
Alignm E-value:
               
5e-34
               

               
Alignm gaps (pig, cow):
               
29, 41
               

               
Conread position:
               
8-312
               

               
Cow position:
               
chr27:18544189-18543874 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
317
               

               
Alignm identity:
               
224
               

               
Alignm E-value:
               
2.00386e-43
               

               
Alignm gaps (pig, cow):
               
29, 91
               

               
Conread position:
               
8-317
               

               
Cow position:
               
chr27:11273760-11273458 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
313
               

               
Alignm identity:
               
216
               

               
Alignm E-value:
               
2e-37
               

               
Alignm gaps (pig, cow):
               
30, 77
               

               
Conread position:
               
8-318
               

               
Cow position:
               
chr27:27632418-27632719 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
313
               

               
Alignm identity:
               
212
               

               
Alignm E-value:
               
5e-34
               

               
Alignm gaps (pig, cow):
               
29, 154
               

               
Conread position:
               
8-319
               

               
Cow position:
               
chr27:4385875-4386181 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
314
               

               
Alignm identity:
               
238
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
29, 77
               

               
Conread position:
               
8-319
               

               
Cow position:
               
chr27:23554128-23554446 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
325
               

               
Alignm identity:
               
241
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
29, 204
               

               
Conread position:
               
8-319
               

               
Cow position:
               
chr27:25676418-25676111 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
318
               

               
Alignm identity:
               
214
               

               
Alignm E-value:
               
1e-29
               

               
Alignm gaps (pig, cow):
               
29, 47
               

               
Conread position:
               
8-319
               

               
Cow position:
               
chr27:27843801-27844122 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
324
               

               
Alignm identity:
               
242
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
29, 136
               

               
Conread position:
               
8-323
               

               
Cow position:
               
chr27:23882183-23882491 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
322
               

               
Alignm identity:
               
235
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
29, 36
               

               
Conread position:
               
8-325
               

               
Cow position:
               
chr27:15925526-15925220 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
323
               

               
Alignm identity:
               
226
               

               
Alignm E-value:
               
2e-37
               

               
Alignm gaps (pig, cow):
               
29, 68
               

               
Conread position:
               
8-325
               

               
Cow position:
               
chr27:26239215-26238899 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
319
               

               
Alignm identity:
               
222
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
206, 162
               

               
Conread position:
               
8-337
               

               
Cow position:
               
chr27:24738610-24738940 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
341
               

               
Alignm identity:
               
232
               

               
Alignm E-value:
               
5e-33
               

               
Alignm gaps (pig, cow):
               
31, 57
               

               
Conread position:
               
8-339
               

               
Cow position:
               
chr27:4805717-4806040 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
338
               

               
Alignm identity:
               
234
               

               
Alignm E-value:
               
3e-38
               

               
Alignm gaps (pig, cow):
               
51, 95
               

               
Conread position:
               
8-361
               

               
Cow position:
               
chr27:16705438-16705085 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
363
               

               
Alignm identity:
               
263
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
31, 145
               

               
Conread position:
               
8-363
               

               
Cow position:
               
chr27:6541816-6541476 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
358
               

               
Alignm identity:
               
254
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
29, 68
               

               
Conread position:
               
8-363
               

               
Cow position:
               
chr27:26413064-26413410 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
358
               

               
Alignm identity:
               
258
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
31, 91
               

               
Conread position:
               
8-364
               

               
Cow position:
               
chr27:815556-815199 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
363
               

               
Alignm identity:
               
254
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
29, 70
               

               
Conread position:
               
8-368
               

               
Cow position:
               
chr27:23472447-23472086 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
370
               

               
Alignm identity:
               
262
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
29, 159
               

               
Conread position:
               
9-319
               

               
Cow position:
               
chr27:19388209-19387899 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
317
               

               
Alignm identity:
               
232
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
28, 187
               

               
Conread position:
               
9-324
               

               
Cow position:
               
chr27:26151210-26150893 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
320
               

               
Alignm identity:
               
230
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
30, 85
               

               
Conread position:
               
9-353
               

               
Cow position:
               
chr27:20036938-20037273 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
350
               

               
Alignm identity:
               
259
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
28, 71
               

               
Conread position:
               
10-208
               

               
Cow position:
               
chr27:23454953-23455166 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
216
               

               
Alignm identity:
               
158
               

               
Alignm E-value:
               
6e-24
               

               
Alignm gaps (pig, cow):
               
27, 11
               

               
Conread position:
               
10-241
               

               
Cow position:
               
chr27:28190028-28190256 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
234
               

               
Alignm identity:
               
178
               

               
Alignm E-value:
               
5.00264e-43
               

               
Alignm gaps (pig, cow):
               
27, 151
               

               
Conread position:
               
10-255
               

               
Cow position:
               
chr27:30670927-30670684 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
250
               

               
Alignm identity:
               
189
               

               
Alignm E-value:
               
5.04467e-44
               

               
Alignm gaps (pig, cow):
               
27, 91
               

               
Conread position:
               
10-317
               

               
Cow position:
               
chr27:22418575-22418884 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
315
               

               
Alignm identity:
               
237
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
27, 110
               

               
Conread position:
               
10-325
               

               
Cow position:
               
chr27:18593460-18593147 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
322
               

               
Alignm identity:
               
253
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
27, 160
               

               
Conread position:
               
11-266
               

               
Cow position:
               
chr27:910896-911149 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
260
               

               
Alignm identity:
               
180
               

               
Alignm E-value:
               
3e-30
               

               
Alignm gaps (pig, cow):
               
27, 88
               

               
Conread position:
               
11-288
               

               
Cow position:
               
chr27:30814593-30814324 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
283
               

               
Alignm identity:
               
195
               

               
Alignm E-value:
               
3e-30
               

               
Alignm gaps (pig, cow):
               
26, 65
               

               
Conread position:
               
11-309
               

               
Cow position:
               
chr27:20636892-20637170 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
301
               

               
Alignm identity:
               
207
               

               
Alignm E-value:
               
9e-29
               

               
Alignm gaps (pig, cow):
               
26, 42
               

               
Conread position:
               
11-363
               

               
Cow position:
               
chr27:27064251-27064595 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
358
               

               
Alignm identity:
               
258
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
27, 123
               

               
Conread position:
               
16-309
               

               
Cow position:
               
chr27:6052282-6051987 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
302
               

               
Alignm identity:
               
203
               

               
Alignm E-value:
               
1e-29
               

               
Alignm gaps (pig, cow):
               
22, 9
               

               
Conread position:
               
16-312
               

               
Cow position:
               
chr27:6788142-6787843 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
307
               

               
Alignm identity:
               
222
               

               
Alignm E-value:
               
2.00386e-43
               

               
Alignm gaps (pig, cow):
               
22, 51
               

               
Conread position:
               
16-322
               

               
Cow position:
               
chr27:20757872-20758153 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
308
               

               
Alignm identity:
               
208
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
61, 39
               

               
Conread position:
               
16-363
               

               
Cow position:
               
chr27:13252193-13251860 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
353
               

               
Alignm identity:
               
262
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
21, 176
               

               
Conread position:
               
17-232
               

               
Cow position:
               
chr27:27550565-27550775 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
218
               

               
Alignm identity:
               
170
               

               
Alignm E-value:
               
9.99967e-42
               

               
Alignm gaps (pig, cow):
               
20, 81
               

               
Conread position:
               
17-309
               

               
Cow position:
               
chr27:26508975-26509264 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
299
               

               
Alignm identity:
               
231
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
69, 181
               

               
Conread position:
               
17-363
               

               
Cow position:
               
chr27:19718106-19717759 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
357
               

               
Alignm identity:
               
253
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
20, 211
               

               
Conread position:
               
18-241
               

               
Cow position:
               
chr27:30417860-30417639 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
227
               

               
Alignm identity:
               
154
               

               
Alignm E-value:
               
5e-23
               

               
Alignm gaps (pig, cow):
               
20, 60
               

               
Conread position:
               
18-309
               

               
Cow position:
               
chr27:30988979-30988688 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
297
               

               
Alignm identity:
               
229
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
19, 88
               

               
Conread position:
               
19-320
               

               
Cow position:
               
chr27:11435148-11435443 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
306
               

               
Alignm identity:
               
229
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
19, 53
               

               
Conread position:
               
25-317
               

               
Cow position:
               
chr27:9169470-9169758 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
296
               

               
Alignm identity:
               
229
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
12, 193
               

               
Conread position:
               
27-218
               

               
Cow position:
               
chr27:24357438-24357237 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
202
               

               
Alignm identity:
               
149
               

               
Alignm E-value:
               
1e-29
               

               
Alignm gaps (pig, cow):
               
11, 0
               

               
Conread position:
               
30-216
               

               
Cow position:
               
chr27:18434301-18434489 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
195
               

               
Alignm identity:
               
152
               

               
Alignm E-value:
               
1e-32
               

               
Alignm gaps (pig, cow):
               
7, 138
               

               
Conread position:
               
31-259
               

               
Cow position:
               
chr27:22268673-22268441 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
235
               

               
Alignm identity:
               
177
               

               
Alignm E-value:
               
4.00001e-41
               

               
Alignm gaps (pig, cow):
               
8, 179
               

               
Conread position:
               
36-312
               

               
Cow position:
               
chr27:25427746-25428021 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
286
               

               
Alignm identity:
               
193
               

               
Alignm E-value:
               
2e-24
               

               
Alignm gaps (pig, cow):
               
179, 22
               

               
Conread position:
               
36-320
               

               
Cow position:
               
chr27:27438342-27438626 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
292
               

               
Alignm identity:
               
207
               

               
Alignm E-value:
               
2e-37
               

               
Alignm gaps (pig, cow):
               
88, 167
               

               
Conread position:
               
36-363
               

               
Cow position:
               
chr27:24477579-24477261 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
333
               

               
Alignm identity:
               
237
               

               
Alignm E-value:
               
5.60519e-45
               

               
Alignm gaps (pig, cow):
               
52, 148
               

               
Conread position:
               
36-363
               

               
Cow position:
               
chr27:30871897-30872212 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
331
               

               
Alignm identity:
               
246
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
95, 136
               

               
Conread position:
               
37-321
               

               
Cow position:
               
chr27:15643337-15643053 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
291
               

               
Alignm identity:
               
223
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
49, 173
               

               
Conread position:
               
37-322
               

               
Cow position:
               
chr27:27613477-27613743 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
287
               

               
Alignm identity:
               
196
               

               
Alignm E-value:
               
7e-26
               

               
Alignm gaps (pig, cow):
               
265, 69
               

               
Conread position:
               
38-319
               

               
Cow position:
               
chr27:27270377-27270662 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
293
               

               
Alignm identity:
               
222
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
13, 65
               

               
Conread position:
               
39-240
               

               
Cow position:
               
chr27:13182303-13182100 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
207
               

               
Alignm identity:
               
145
               

               
Alignm E-value:
               
2e-24
               

               
Alignm gaps (pig, cow):
               
21, 165
               

               
Conread position:
               
39-307
               

               
Cow position:
               
chr27:19522697-19522426 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
275
               

               
Alignm identity:
               
182
               

               
Alignm E-value:
               
2e-26
               

               
Alignm gaps (pig, cow):
               
47, 156
               

               
Conread position:
               
39-310
               

               
Cow position:
               
chr27:19423363-19423088 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
280
               

               
Alignm identity:
               
187
               

               
Alignm E-value:
               
2e-26
               

               
Alignm gaps (pig, cow):
               
47, 162
               

               
Conread position:
               
39-318
               

               
Cow position:
               
chr27:11480470-11480755 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
286
               

               
Alignm identity:
               
206
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
85, 0
               

               
Conread position:
               
40-309
               

               
Cow position:
               
chr27:4881766-4881494 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
276
               

               
Alignm identity:
               
182
               

               
Alignm E-value:
               
7e-26
               

               
Alignm gaps (pig, cow):
               
46, 155
               

               
Conread position:
               
40-309
               

               
Cow position:
               
chr27:15032882-15032610 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
276
               

               
Alignm identity:
               
179
               

               
Alignm E-value:
               
5e-23
               

               
Alignm gaps (pig, cow):
               
46, 155
               

               
Conread position:
               
42-270
               

               
Cow position:
               
chr27:154525-154292 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
234
               

               
Alignm identity:
               
159
               

               
Alignm E-value:
               
8e-28
               

               
Alignm gaps (pig, cow):
               
39, 0
               

               
Conread position:
               
43-208
               

               
Cow position:
               
chr27:29905758-29905591 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
169
               

               
Alignm identity:
               
122
               

               
Alignm E-value:
               
5e-23
               

               
Alignm gaps (pig, cow):
               
43, 61
               

               
Conread position:
               
43-319
               

               
Cow position:
               
chr27:23891093-23890818 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
280
               

               
Alignm identity:
               
220
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
81, 46
               

               
Conread position:
               
44-181
               

               
Cow position:
               
chr27:30483298-30483155 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
144
               

               
Alignm identity:
               
109
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
42, 0
               

               
Conread position:
               
44-182
               

               
Cow position:
               
chr27:13375877-13376013 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
139
               

               
Alignm identity:
               
108
               

               
Alignm E-value:
               
2e-26
               

               
Alignm gaps (pig, cow):
               
40, 0
               

               
Conread position:
               
47-172
               

               
Cow position:
               
chr27:28008905-28009035 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
131
               

               
Alignm identity:
               
105
               

               
Alignm E-value:
               
7e-26
               

               
Alignm gaps (pig, cow):
               
77, 0
               

               
Conread position:
               
47-319
               

               
Cow position:
               
chr27:20549562-20549831 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
276
               

               
Alignm identity:
               
187
               

               
Alignm E-value:
               
3e-30
               

               
Alignm gaps (pig, cow):
               
143, 26
               

               
Conread position:
               
48-338
               

               
Cow position:
               
chr27:7731098-7731395 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
304
               

               
Alignm identity:
               
226
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
76, 122
               

               
Conread position:
               
49-319
               

               
Cow position:
               
chr27:26489752-26490028 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
277
               

               
Alignm identity:
               
197
               

               
Alignm E-value:
               
9.99967e-42
               

               
Alignm gaps (pig, cow):
               
37, 0
               

               
Conread position:
               
50-331
               

               
Cow position:
               
chr27:715652-715371 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
286
               

               
Alignm identity:
               
218
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
18, 147
               

               
Conread position:
               
51-323
               

               
Cow position:
               
chr27:3306921-3306651 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
280
               

               
Alignm identity:
               
212
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
24, 70
               

               
Conread position:
               
51-324
               

               
Cow position:
               
chr27:29312522-29312799 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
279
               

               
Alignm identity:
               
183
               

               
Alignm E-value:
               
3e-27
               

               
Alignm gaps (pig, cow):
               
35, 83
               

               
Conread position:
               
52-256
               

               
Cow position:
               
chr27:4011820-4011622 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
208
               

               
Alignm identity:
               
165
               

               
Alignm E-value:
               
9.99995e-41
               

               
Alignm gaps (pig, cow):
               
72, 22
               

               
Conread position:
               
53-314
               

               
Cow position:
               
chr27:20247658-20247919 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
271
               

               
Alignm identity:
               
195
               

               
Alignm E-value:
               
7e-36
               

               
Alignm gaps (pig, cow):
               
71, 30
               

               
Conread position:
               
58-304
               

               
Cow position:
               
chr27:20789239-20789484 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
249
               

               
Alignm identity:
               
174
               

               
Alignm E-value:
               
5e-34
               

               
Alignm gaps (pig, cow):
               
123, 26
               

               
Conread position:
               
58-325
               

               
Cow position:
               
chr27:17331643-17331373 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
275
               

               
Alignm identity:
               
194
               

               
Alignm E-value:
               
7e-37
               

               
Alignm gaps (pig, cow):
               
28, 161
               

               
Conread position:
               
58-359
               

               
Cow position:
               
chr27:20901702-20901397 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
319
               

               
Alignm identity:
               
216
               

               
Alignm E-value:
               
2e-25
               

               
Alignm gaps (pig, cow):
               
66, 121
               

               
Conread position:
               
61-309
               

               
Cow position:
               
chr27:20919030-20918781 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
256
               

               
Alignm identity:
               
181
               

               
Alignm E-value:
               
4e-31
               

               
Alignm gaps (pig, cow):
               
27, 108
               

               
Conread position:
               
67-318
               

               
Cow position:
               
chr27:5745000-5744744 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
260
               

               
Alignm identity:
               
172
               

               
Alignm E-value:
               
5e-22
               

               
Alignm gaps (pig, cow):
               
30, 119
               

               
Conread position:
               
69-323
               

               
Cow position:
               
chr27:673914-674154 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
259
               

               
Alignm identity:
               
187
               

               
Alignm E-value:
               
4e-31
               

               
Alignm gaps (pig, cow):
               
28, 133
               

               
Conread position:
               
71-261
               

               
Cow position:
               
chr27:10395134-10395321 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
193
               

               
Alignm identity:
               
145
               

               
Alignm E-value:
               
1e-31
               

               
Alignm gaps (pig, cow):
               
65, 26
               

               
Conread position:
               
71-270
               

               
Cow position:
               
chr27:7537949-7538148 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
206
               

               
Alignm identity:
               
156
               

               
Alignm E-value:
               
1e-32
               

               
Alignm gaps (pig, cow):
               
53, 27
               

               
Conread position:
               
71-320
               

               
Cow position:
               
chr27:8168302-8168551 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
253
               

               
Alignm identity:
               
188
               

               
Alignm E-value:
               
1.96182e-44
               

               
Alignm gaps (pig, cow):
               
58, 131
               

               
Conread position:
               
71-363
               

               
Cow position:
               
chr27:16965715-16965421 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
311
               

               
Alignm identity:
               
225
               

               
Alignm E-value:
               
6e-35
               

               
Alignm gaps (pig, cow):
               
53, 137
               

               
Conread position:
               
74-309
               

               
Cow position:
               
chr27:21991277-21991036 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
246
               

               
Alignm identity:
               
176
               

               
Alignm E-value:
               
3e-29
               

               
Alignm gaps (pig, cow):
               
50, 24
               

               
Conread position:
               
75-350
               

               
Cow position:
               
chr27:27442047-27442319 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
282
               

               
Alignm identity:
               
195
               

               
Alignm E-value:
               
1e-30
               

               
Alignm gaps (pig, cow):
               
49, 94
               

               
Conread position:
               
75-363
               

               
Cow position:
               
chr27:24371354-24371087 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
289
               

               
Alignm identity:
               
208
               

               
Alignm E-value:
               
7e-37
               

               
Alignm gaps (pig, cow):
               
15, 0
               

               
Conread position:
               
76-271
               

               
Cow position:
               
chr27:26141894-26141698 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
198
               

               
Alignm identity:
               
136
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
51, 148
               

               
Conread position:
               
80-270
               

               
Cow position:
               
chr27:18491962-18491769 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
201
               

               
Alignm identity:
               
145
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
12, 30
               

               
Conread position:
               
80-272
               

               
Cow position:
               
chr27:6350711-6350913 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
204
               

               
Alignm identity:
               
154
               

               
Alignm E-value:
               
1e-32
               

               
Alignm gaps (pig, cow):
               
44, 103
               

               
Conread position:
               
82-363
               

               
Cow position:
               
chr27:29380974-29380699 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
288
               

               
Alignm identity:
               
207
               

               
Alignm E-value:
               
9e-39
               

               
Alignm gaps (pig, cow):
               
49, 25
               

               
Conread position:
               
84-318
               

               
Cow position:
               
chr27:16626011-16625781 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
236
               

               
Alignm identity:
               
167
               

               
Alignm E-value:
               
5e-33
               

               
Alignm gaps (pig, cow):
               
99, 30
               

               
Conread position:
               
84-320
               

               
Cow position:
               
chr27:30260781-30261013 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
242
               

               
Alignm identity:
               
177
               

               
Alignm E-value:
               
5e-34
               

               
Alignm gaps (pig, cow):
               
40, 13
               

               
Conread position:
               
86-318
               

               
Cow position:
               
chr27:20078979-20078749 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
237
               

               
Alignm identity:
               
169
               

               
Alignm E-value:
               
1e-31
               

               
Alignm gaps (pig, cow):
               
38, 117
               

               
Conread position:
               
86-320
               

               
Cow position:
               
chr27:17994828-17995064 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
240
               

               
Alignm identity:
               
172
               

               
Alignm E-value:
               
2e-33
               

               
Alignm gaps (pig, cow):
               
6, 128
               

               
Conread position:
               
88-363
               

               
Cow position:
               
chr27:31148870-31148606 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
277
               

               
Alignm identity:
               
199
               

               
Alignm E-value:
               
3e-39
               

               
Alignm gaps (pig, cow):
               
96, 16
               

               
Conread position:
               
90-318
               

               
Cow position:
               
chr27:11151784-11151550 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
236
               

               
Alignm identity:
               
173
               

               
Alignm E-value:
               
7e-36
               

               
Alignm gaps (pig, cow):
               
34, 166
               

               
Conread position:
               
92-265
               

               
Cow position:
               
chr27:20570228-20570053 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
179
               

               
Alignm identity:
               
138
               

               
Alignm E-value:
               
3e-30
               

               
Alignm gaps (pig, cow):
               
26, 122
               

               
Conread position:
               
92-323
               

               
Cow position:
               
chr27:4858540-4858764 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
233
               

               
Alignm identity:
               
174
               

               
Alignm E-value:
               
1e-39
               

               
Alignm gaps (pig, cow):
               
229, 79
               

               
Conread position:
               
92-380
               

               
Cow position:
               
chr27:12191383-12191651 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
291
               

               
Alignm identity:
               
220
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
36, 89
               

               
Conread position:
               
98-324
               

               
Cow position:
               
chr27:22386970-22386750 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
229
               

               
Alignm identity:
               
161
               

               
Alignm E-value:
               
3e-28
               

               
Alignm gaps (pig, cow):
               
83, 102
               

               
Conread position:
               
98-370
               

               
Cow position:
               
chr27:26135237-26134975 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
276
               

               
Alignm identity:
               
185
               

               
Alignm E-value:
               
6e-25
               

               
Alignm gaps (pig, cow):
               
92, 8
               

               
Conread position:
               
101-365
               

               
Cow position:
               
chr27:28896972-28896723 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
267
               

               
Alignm identity:
               
183
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
13, 31
               

               
Conread position:
               
102-332
               

               
Cow position:
               
chr27:23736058-23735830 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
235
               

               
Alignm identity:
               
168
               

               
Alignm E-value:
               
1e-30
               

               
Alignm gaps (pig, cow):
               
25, 34
               

               
Conread position:
               
102-363
               

               
Cow position:
               
chr27:29236677-29236408 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
278
               

               
Alignm identity:
               
202
               

               
Alignm E-value:
               
2e-36
               

               
Alignm gaps (pig, cow):
               
80, 235
               

               
Conread position:
               
103-319
               

               
Cow position:
               
chr27:8263239-8263457 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
221
               

               
Alignm identity:
               
169
               

               
Alignm E-value:
               
1.00053e-42
               

               
Alignm gaps (pig, cow):
               
21, 66
               

               
Conread position:
               
107-309
               

               
Cow position:
               
chr27:20055878-20056078 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
206
               

               
Alignm identity:
               
145
               

               
Alignm E-value:
               
6e-24
               

               
Alignm gaps (pig, cow):
               
23, 98
               

               
Conread position:
               
123-263
               

               
Cow position:
               
chr27:1565351-1565490 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
141
               

               
Alignm identity:
               
107
               

               
Alignm E-value:
               
6e-25
               

               
Alignm gaps (pig, cow):
               
66, 0
               

               
Conread position:
               
123-271
               

               
Cow position:
               
chr27:26979633-26979784 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
152
               

               
Alignm identity:
               
117
               

               
Alignm E-value:
               
3e-27
               

               
Alignm gaps (pig, cow):
               
61, 0
               

               
Conread position:
               
124-342
               

               
Cow position:
               
chr27:15215307-15215087 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
222
               

               
Alignm identity:
               
171
               

               
Alignm E-value:
               
5.60519e-45
               

               
Alignm gaps (pig, cow):
               
56, 125
               

               
Conread position:
               
126-363
               

               
Cow position:
               
chr27:15865679-15865451 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
241
               

               
Alignm identity:
               
174
               

               
Alignm E-value:
               
4e-32
               

               
Alignm gaps (pig, cow):
               
58, 18
               

               
Conread position:
               
129-362
               

               
Cow position:
               
chr27:22225526-22225747 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
235
               

               
Alignm identity:
               
180
               

               
Alignm E-value:
               
4.00001e-41
               

               
Alignm gaps (pig, cow):
               
53, 71
               

               
Conread position:
               
130-361
               

               
Cow position:
               
chr27:24939972-24939735 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
244
               

               
Alignm identity:
               
166
               

               
Alignm E-value:
               
4e-21
               

               
Alignm gaps (pig, cow):
               
67, 200
               

               
Conread position:
               
130-363
               

               
Cow position:
               
chr27:26111841-26112071 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
240
               

               
Alignm identity:
               
179
               

               
Alignm E-value:
               
7e-37
               

               
Alignm gaps (pig, cow):
               
45, 81
               

               
Conread position:
               
130-365
               

               
Cow position:
               
chr27:20085632-20085399 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
242
               

               
Alignm identity:
               
182
               

               
Alignm E-value:
               
8e-38
               

               
Alignm gaps (pig, cow):
               
58, 81
               

               
Conread position:
               
132-334
               

               
Cow position:
               
chr27:31017768-31017960 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
203
               

               
Alignm identity:
               
151
               

               
Alignm E-value:
               
1e-30
               

               
Alignm gaps (pig, cow):
               
74, 0
               

               
Conread position:
               
132-368
               

               
Cow position:
               
chr27:7974240-7974016 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
239
               

               
Alignm identity:
               
173
               

               
Alignm E-value:
               
3e-30
               

               
Alignm gaps (pig, cow):
               
52, 78
               

               
Conread position:
               
136-323
               

               
Cow position:
               
chr27:21976111-21975929 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
188
               

               
Alignm identity:
               
143
               

               
Alignm E-value:
               
5e-34
               

               
Alignm gaps (pig, cow):
               
54, 0
               

               
Conread position:
               
136-363
               

               
Cow position:
               
chr27:20812967-20812749 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
228
               

               
Alignm identity:
               
166
               

               
Alignm E-value:
               
6e-35
               

               
Alignm gaps (pig, cow):
               
68, 0
               

               
Conread position:
               
141-320
               

               
Cow position:
               
chr27:31151434-31151260 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
180
               

               
Alignm identity:
               
126
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
39, 0
               

               
Conread position:
               
145-310
               

               
Cow position:
               
chr27:20584402-20584566 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
169
               

               
Alignm identity:
               
126
               

               
Alignm E-value:
               
6e-25
               

               
Alignm gaps (pig, cow):
               
21, 69
               

               
Conread position:
               
146-356
               

               
Cow position:
               
chr27:23485265-23485052 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
217
               

               
Alignm identity:
               
147
               

               
Alignm E-value:
               
4e-21
               

               
Alignm gaps (pig, cow):
               
45, 139
               

               
Conread position:
               
154-319
               

               
Cow position:
               
chr27:23559986-23560151 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
169
               

               
Alignm identity:
               
123
               

               
Alignm E-value:
               
5e-23
               

               
Alignm gaps (pig, cow):
               
27, 48
               

               
Conread position:
               
167-319
               

               
Cow position:
               
chr27:18922799-18922952 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
155
               

               
Alignm identity:
               
117
               

               
Alignm E-value:
               
7e-26
               

               
Alignm gaps (pig, cow):
               
17, 119
               

               
Conread position:
               
171-309
               

               
Cow position:
               
chr27:28472810-28472670 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
142
               

               
Alignm identity:
               
108
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
13, 87
               

               
Conread position:
               
177-356
               

               
Cow position:
               
chr27:25152103-25151933 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
181
               

               
Alignm identity:
               
134
               

               
Alignm E-value:
               
2e-24
               

               
Alignm gaps (pig, cow):
               
7, 34
               

               
Conread position:
               
211-323
               

               
Cow position:
               
chr27:30908659-30908549 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
113
               

               
Alignm identity:
               
91
               

               
Alignm E-value:
               
5e-22
               

               
Alignm gaps (pig, cow):
               
12, 0
               

               
Conread position:
               
216-363
               

               
Cow position:
               
chr27:30489427-30489566 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
148
               

               
Alignm identity:
               
111
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
107, 0
               

               
Conread position:
               
222-324
               

               
Cow position:
               
chr27:29319388-29319286 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
103
               

               
Alignm identity:
               
86
               

               
Alignm E-value:
               
6e-24
               

               
Alignm gaps (pig, cow):
               
0, 0
               
Show alignments to all cow chromosomes.