Cow genome map

Conread name: Pig4-TMW8001P16

Conread position: 1-141
Cow position: chr9:13993936-13993791 (view UCSC Genome Browser custom track)
Alignm length: 147
Alignm identity: 115
Alignm E-value: 4e-25
Alignm gaps (pig, cow): 6, 141

Conread position: 1-146
Cow position: chr9:34400311-34400159 (view UCSC Genome Browser custom track)
Alignm length: 153
Alignm identity: 122
Alignm E-value: 6e-28
Alignm gaps (pig, cow): 13, 0

Conread position: 1-147
Cow position: chr9:25969618-25969466 (view UCSC Genome Browser custom track)
Alignm length: 153
Alignm identity: 122
Alignm E-value: 6e-29
Alignm gaps (pig, cow): 6, 0

Conread position: 1-150
Cow position: chr9:29338760-29338917 (view UCSC Genome Browser custom track)
Alignm length: 158
Alignm identity: 124
Alignm E-value: 6e-28
Alignm gaps (pig, cow): 16, 0

Conread position: 1-156
Cow position: chr9:20237736-20237895 (view UCSC Genome Browser custom track)
Alignm length: 160
Alignm identity: 129
Alignm E-value: 4e-34
Alignm gaps (pig, cow): 32, 0

Conread position: 1-162
Cow position: chr9:18140023-18140188 (view UCSC Genome Browser custom track)
Alignm length: 167
Alignm identity: 132
Alignm E-value: 9e-32
Alignm gaps (pig, cow): 12, 44

Conread position: 1-164
Cow position: chr9:33823363-33823205 (view UCSC Genome Browser custom track)
Alignm length: 165
Alignm identity: 125
Alignm E-value: 5e-26
Alignm gaps (pig, cow): 36, 23

Conread position: 1-173
Cow position: chr9:31662741-31662561 (view UCSC Genome Browser custom track)
Alignm length: 181
Alignm identity: 136
Alignm E-value: 2e-27
Alignm gaps (pig, cow): 36, 0

Conread position: 1-176
Cow position: chr9:1350174-1350352 (view UCSC Genome Browser custom track)
Alignm length: 181
Alignm identity: 140
Alignm E-value: 3e-32
Alignm gaps (pig, cow): 9, 21

Conread position: 1-177
Cow position: chr9:35101139-35100961 (view UCSC Genome Browser custom track)
Alignm length: 179
Alignm identity: 141
Alignm E-value: 6e-38
Alignm gaps (pig, cow): 13, 0

Conread position: 1-179
Cow position: chr9:18072846-18073021 (view UCSC Genome Browser custom track)
Alignm length: 180
Alignm identity: 132
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 36, 98

Conread position: 1-181
Cow position: chr9:38184206-38184395 (view UCSC Genome Browser custom track)
Alignm length: 190
Alignm identity: 144
Alignm E-value: 2e-29
Alignm gaps (pig, cow): 6, 0

Conread position: 1-185
Cow position: chr9:2398360-2398540 (view UCSC Genome Browser custom track)
Alignm length: 187
Alignm identity: 143
Alignm E-value: 3e-32
Alignm gaps (pig, cow): 14, 85

Conread position: 1-185
Cow position: chr9:10877594-10877786 (view UCSC Genome Browser custom track)
Alignm length: 193
Alignm identity: 153
Alignm E-value: 2e-38
Alignm gaps (pig, cow): 14, 0

Conread position: 1-200
Cow position: chr9:9491064-9490862 (view UCSC Genome Browser custom track)
Alignm length: 206
Alignm identity: 166
Alignm E-value: 9.94922e-44
Alignm gaps (pig, cow): 36, 65

Conread position: 1-202
Cow position: chr9:62360957-62361167 (view UCSC Genome Browser custom track)
Alignm length: 211
Alignm identity: 151
Alignm E-value: 5e-27
Alignm gaps (pig, cow): 20, 0

Conread position: 1-206
Cow position: chr9:30664507-30664720 (view UCSC Genome Browser custom track)
Alignm length: 214
Alignm identity: 166
Alignm E-value: 8.00001e-41
Alignm gaps (pig, cow): 36, 0

Conread position: 1-208
Cow position: chr9:48343873-48343663 (view UCSC Genome Browser custom track)
Alignm length: 211
Alignm identity: 157
Alignm E-value: 5e-37
Alignm gaps (pig, cow): 36, 0

Conread position: 1-217
Cow position: chr9:61846878-61847096 (view UCSC Genome Browser custom track)
Alignm length: 222
Alignm identity: 168
Alignm E-value: 6e-38
Alignm gaps (pig, cow): 13, 85

Conread position: 1-219
Cow position: chr9:36623180-36623392 (view UCSC Genome Browser custom track)
Alignm length: 223
Alignm identity: 168
Alignm E-value: 4e-34
Alignm gaps (pig, cow): 12, 90

Conread position: 1-229
Cow position: chr9:16218371-16218606 (view UCSC Genome Browser custom track)
Alignm length: 240
Alignm identity: 180
Alignm E-value: 1e-36
Alignm gaps (pig, cow): 13, 172

Conread position: 1-233
Cow position: chr9:1984250-1984485 (view UCSC Genome Browser custom track)
Alignm length: 242
Alignm identity: 180
Alignm E-value: 4e-35
Alignm gaps (pig, cow): 36, 53

Conread position: 1-235
Cow position: chr9:49404026-49403796 (view UCSC Genome Browser custom track)
Alignm length: 239
Alignm identity: 170
Alignm E-value: 6e-29
Alignm gaps (pig, cow): 6, 80

Conread position: 1-237
Cow position: chr9:4928901-4928660 (view UCSC Genome Browser custom track)
Alignm length: 243
Alignm identity: 173
Alignm E-value: 1e-34
Alignm gaps (pig, cow): 36, 17

Conread position: 1-237
Cow position: chr9:36067177-36066940 (view UCSC Genome Browser custom track)
Alignm length: 241
Alignm identity: 171
Alignm E-value: 1e-32
Alignm gaps (pig, cow): 40, 97

Conread position: 1-241
Cow position: chr9:60037927-60037681 (view UCSC Genome Browser custom track)
Alignm length: 248
Alignm identity: 182
Alignm E-value: 6e-39
Alignm gaps (pig, cow): 32, 79

Conread position: 1-245
Cow position: chr9:58439510-58439755 (view UCSC Genome Browser custom track)
Alignm length: 248
Alignm identity: 188
Alignm E-value: 0
Alignm gaps (pig, cow): 36, 116

Conread position: 1-254
Cow position: chr9:18002677-18002936 (view UCSC Genome Browser custom track)
Alignm length: 260
Alignm identity: 200
Alignm E-value: 0
Alignm gaps (pig, cow): 13, 0

Conread position: 1-256
Cow position: chr9:36999789-37000045 (view UCSC Genome Browser custom track)
Alignm length: 259
Alignm identity: 196
Alignm E-value: 0
Alignm gaps (pig, cow): 13, 153

Conread position: 1-257
Cow position: chr9:19542181-19541920 (view UCSC Genome Browser custom track)
Alignm length: 266
Alignm identity: 185
Alignm E-value: 7e-30
Alignm gaps (pig, cow): 16, 199

Conread position: 1-259
Cow position: chr9:23028064-23027817 (view UCSC Genome Browser custom track)
Alignm length: 262
Alignm identity: 200
Alignm E-value: 9.94922e-44
Alignm gaps (pig, cow): 36, 12

Conread position: 1-259
Cow position: chr9:53602685-53602440 (view UCSC Genome Browser custom track)
Alignm length: 263
Alignm identity: 206
Alignm E-value: 0
Alignm gaps (pig, cow): 6, 87

Conread position: 1-259
Cow position: chr9:64516825-64517088 (view UCSC Genome Browser custom track)
Alignm length: 268
Alignm identity: 209
Alignm E-value: 0
Alignm gaps (pig, cow): 85, 164

Conread position: 1-263
Cow position: chr9:1712216-1712467 (view UCSC Genome Browser custom track)
Alignm length: 264
Alignm identity: 191
Alignm E-value: 5e-37
Alignm gaps (pig, cow): 36, 13

Conread position: 1-265
Cow position: chr9:29034768-29035029 (view UCSC Genome Browser custom track)
Alignm length: 270
Alignm identity: 207
Alignm E-value: 0
Alignm gaps (pig, cow): 36, 75

Conread position: 1-268
Cow position: chr9:10092122-10092390 (view UCSC Genome Browser custom track)
Alignm length: 278
Alignm identity: 205
Alignm E-value: 8.00001e-41
Alignm gaps (pig, cow): 11, 21

Conread position: 1-270
Cow position: chr9:40105748-40105469 (view UCSC Genome Browser custom track)
Alignm length: 284
Alignm identity: 201
Alignm E-value: 4e-35
Alignm gaps (pig, cow): 36, 210

Conread position: 1-274
Cow position: chr9:1997404-1997134 (view UCSC Genome Browser custom track)
Alignm length: 282
Alignm identity: 207
Alignm E-value: 6e-38
Alignm gaps (pig, cow): 14, 36

Conread position: 1-281
Cow position: chr9:36410080-36410367 (view UCSC Genome Browser custom track)
Alignm length: 290
Alignm identity: 202
Alignm E-value: 4e-36
Alignm gaps (pig, cow): 6, 227

Conread position: 1-290
Cow position: chr9:58133752-58134041 (view UCSC Genome Browser custom track)
Alignm length: 299
Alignm identity: 225
Alignm E-value: 0
Alignm gaps (pig, cow): 37, 15

Conread position: 1-296
Cow position: chr9:1951998-1952294 (view UCSC Genome Browser custom track)
Alignm length: 298
Alignm identity: 231
Alignm E-value: 0
Alignm gaps (pig, cow): 36, 220

Conread position: 1-300
Cow position: chr9:35533680-35533981 (view UCSC Genome Browser custom track)
Alignm length: 305
Alignm identity: 235
Alignm E-value: 0
Alignm gaps (pig, cow): 36, 98

Conread position: 1-307
Cow position: chr9:21030588-21030273 (view UCSC Genome Browser custom track)
Alignm length: 318
Alignm identity: 235
Alignm E-value: 0
Alignm gaps (pig, cow): 8, 209

Conread position: 1-307
Cow position: chr9:32625268-32624972 (view UCSC Genome Browser custom track)
Alignm length: 309
Alignm identity: 203
Alignm E-value: 5e-26
Alignm gaps (pig, cow): 13, 22

Conread position: 1-307
Cow position: chr9:53631256-53631566 (view UCSC Genome Browser custom track)
Alignm length: 316
Alignm identity: 209
Alignm E-value: 6e-28
Alignm gaps (pig, cow): 14, 25

Conread position: 1-309
Cow position: chr9:4534710-4535018 (view UCSC Genome Browser custom track)
Alignm length: 315
Alignm identity: 206
Alignm E-value: 5e-27
Alignm gaps (pig, cow): 14, 232

Conread position: 1-309
Cow position: chr9:8997828-8997523 (view UCSC Genome Browser custom track)
Alignm length: 319
Alignm identity: 226
Alignm E-value: 5e-37
Alignm gaps (pig, cow): 6, 208

Conread position: 1-309
Cow position: chr9:12284831-12284518 (view UCSC Genome Browser custom track)
Alignm length: 317
Alignm identity: 208
Alignm E-value: 6e-29
Alignm gaps (pig, cow): 14, 196

Conread position: 1-309
Cow position: chr9:15982806-15983109 (view UCSC Genome Browser custom track)
Alignm length: 319
Alignm identity: 238
Alignm E-value: 0
Alignm gaps (pig, cow): 6, 29

Conread position: 1-309
Cow position: chr9:20681135-20681443 (view UCSC Genome Browser custom track)
Alignm length: 315
Alignm identity: 220
Alignm E-value: 2e-40
Alignm gaps (pig, cow): 8, 60

Conread position: 1-309
Cow position: chr9:25514914-25515227 (view UCSC Genome Browser custom track)
Alignm length: 320
Alignm identity: 212
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 14, 201

Conread position: 1-309
Cow position: chr9:26992904-26993213 (view UCSC Genome Browser custom track)
Alignm length: 313
Alignm identity: 199
Alignm E-value: 4e-25
Alignm gaps (pig, cow): 34, 192

Conread position: 1-309
Cow position: chr9:29184862-29185174 (view UCSC Genome Browser custom track)
Alignm length: 313
Alignm identity: 248
Alignm E-value: 0
Alignm gaps (pig, cow): 36, 0

Conread position: 1-309
Cow position: chr9:35850170-35849867 (view UCSC Genome Browser custom track)
Alignm length: 310
Alignm identity: 238
Alignm E-value: 0
Alignm gaps (pig, cow): 36, 178

Conread position: 1-309
Cow position: chr9:53257788-53258091 (view UCSC Genome Browser custom track)
Alignm length: 314
Alignm identity: 224
Alignm E-value: 8.99634e-43
Alignm gaps (pig, cow): 6, 91

Conread position: 1-309
Cow position: chr9:58674013-58673714 (view UCSC Genome Browser custom track)
Alignm length: 320
Alignm identity: 219
Alignm E-value: 1e-25
Alignm gaps (pig, cow): 6, 62

Conread position: 1-310
Cow position: chr9:6089369-6089051 (view UCSC Genome Browser custom track)
Alignm length: 323
Alignm identity: 240
Alignm E-value: 0
Alignm gaps (pig, cow): 13, 78

Conread position: 1-312
Cow position: chr9:49982825-49983129 (view UCSC Genome Browser custom track)
Alignm length: 322
Alignm identity: 240
Alignm E-value: 0
Alignm gaps (pig, cow): 6, 151

Conread position: 1-314
Cow position: chr9:35203156-35202837 (view UCSC Genome Browser custom track)
Alignm length: 326
Alignm identity: 222
Alignm E-value: 3e-32
Alignm gaps (pig, cow): 14, 230

Conread position: 1-314
Cow position: chr9:48106847-48107158 (view UCSC Genome Browser custom track)
Alignm length: 319
Alignm identity: 235
Alignm E-value: 0
Alignm gaps (pig, cow): 14, 92

Conread position: 1-317
Cow position: chr9:30138397-30138076 (view UCSC Genome Browser custom track)
Alignm length: 327
Alignm identity: 238
Alignm E-value: 0
Alignm gaps (pig, cow): 34, 98

Conread position: 1-317
Cow position: chr9:55074864-55075173 (view UCSC Genome Browser custom track)
Alignm length: 323
Alignm identity: 246
Alignm E-value: 0
Alignm gaps (pig, cow): 36, 80

Conread position: 1-317
Cow position: chr9:55118350-55118042 (view UCSC Genome Browser custom track)
Alignm length: 320
Alignm identity: 238
Alignm E-value: 0
Alignm gaps (pig, cow): 12, 44

Conread position: 1-318
Cow position: chr9:6397514-6397830 (view UCSC Genome Browser custom track)
Alignm length: 322
Alignm identity: 215
Alignm E-value: 4e-34
Alignm gaps (pig, cow): 39, 58

Conread position: 1-318
Cow position: chr9:11299425-11299726 (view UCSC Genome Browser custom track)
Alignm length: 321
Alignm identity: 240
Alignm E-value: 0
Alignm gaps (pig, cow): 6, 33

Conread position: 1-318
Cow position: chr9:13994460-13994120 (view UCSC Genome Browser custom track)
Alignm length: 341
Alignm identity: 259
Alignm E-value: 0
Alignm gaps (pig, cow): 6, 0

Conread position: 1-318
Cow position: chr9:14974654-14974965 (view UCSC Genome Browser custom track)
Alignm length: 326
Alignm identity: 237
Alignm E-value: 2.94273e-44
Alignm gaps (pig, cow): 13, 117

Conread position: 1-318
Cow position: chr9:19539369-19539055 (view UCSC Genome Browser custom track)
Alignm length: 329
Alignm identity: 244
Alignm E-value: 0
Alignm gaps (pig, cow): 6, 208

Conread position: 1-318
Cow position: chr9:24726406-24726711 (view UCSC Genome Browser custom track)
Alignm length: 324
Alignm identity: 234
Alignm E-value: 8.00001e-42
Alignm gaps (pig, cow): 6, 91

Conread position: 1-318
Cow position: chr9:31077406-31077716 (view UCSC Genome Browser custom track)
Alignm length: 324
Alignm identity: 237
Alignm E-value: 0
Alignm gaps (pig, cow): 8, 204

Conread position: 1-318
Cow position: chr9:41416622-41416287 (view UCSC Genome Browser custom track)
Alignm length: 339
Alignm identity: 248
Alignm E-value: 0
Alignm gaps (pig, cow): 36, 90

Conread position: 1-319
Cow position: chr9:5218908-5219219 (view UCSC Genome Browser custom track)
Alignm length: 323
Alignm identity: 228
Alignm E-value: 3.00018e-42
Alignm gaps (pig, cow): 36, 84

Conread position: 1-319
Cow position: chr9:6192187-6192507 (view UCSC Genome Browser custom track)
Alignm length: 327
Alignm identity: 231
Alignm E-value: 2.99878e-43
Alignm gaps (pig, cow): 12, 149

Conread position: 1-319
Cow position: chr9:18342994-18342686 (view UCSC Genome Browser custom track)
Alignm length: 322
Alignm identity: 217
Alignm E-value: 3e-31
Alignm gaps (pig, cow): 9, 22

Conread position: 1-319
Cow position: chr9:22114361-22114682 (view UCSC Genome Browser custom track)
Alignm length: 326
Alignm identity: 249
Alignm E-value: 0
Alignm gaps (pig, cow): 13, 109

Conread position: 1-319
Cow position: chr9:25546905-25546593 (view UCSC Genome Browser custom track)
Alignm length: 322
Alignm identity: 238
Alignm E-value: 0
Alignm gaps (pig, cow): 34, 98

Conread position: 1-319
Cow position: chr9:29825301-29824983 (view UCSC Genome Browser custom track)
Alignm length: 325
Alignm identity: 220
Alignm E-value: 4e-36
Alignm gaps (pig, cow): 177, 29

Conread position: 1-319
Cow position: chr9:31640046-31640372 (view UCSC Genome Browser custom track)
Alignm length: 327
Alignm identity: 222
Alignm E-value: 2e-40
Alignm gaps (pig, cow): 19, 0

Conread position: 1-319
Cow position: chr9:34957780-34958103 (view UCSC Genome Browser custom track)
Alignm length: 326
Alignm identity: 230
Alignm E-value: 0
Alignm gaps (pig, cow): 36, 169

Conread position: 1-319
Cow position: chr9:51566216-51566542 (view UCSC Genome Browser custom track)
Alignm length: 333
Alignm identity: 255
Alignm E-value: 0
Alignm gaps (pig, cow): 38, 29

Conread position: 1-319
Cow position: chr9:51620707-51620398 (view UCSC Genome Browser custom track)
Alignm length: 321
Alignm identity: 228
Alignm E-value: 9.80909e-45
Alignm gaps (pig, cow): 36, 112

Conread position: 1-319
Cow position: chr9:64559614-64559929 (view UCSC Genome Browser custom track)
Alignm length: 324
Alignm identity: 238
Alignm E-value: 0
Alignm gaps (pig, cow): 16, 100

Conread position: 1-320
Cow position: chr9:9723611-9723924 (view UCSC Genome Browser custom track)
Alignm length: 327
Alignm identity: 244
Alignm E-value: 0
Alignm gaps (pig, cow): 36, 56

Conread position: 1-321
Cow position: chr9:33940879-33940556 (view UCSC Genome Browser custom track)
Alignm length: 327
Alignm identity: 248
Alignm E-value: 0
Alignm gaps (pig, cow): 9, 218

Conread position: 1-323
Cow position: chr9:13670909-13670582 (view UCSC Genome Browser custom track)
Alignm length: 334
Alignm identity: 249
Alignm E-value: 0
Alignm gaps (pig, cow): 6, 169

Conread position: 1-323
Cow position: chr9:20989182-20989509 (view UCSC Genome Browser custom track)
Alignm length: 337
Alignm identity: 248
Alignm E-value: 0
Alignm gaps (pig, cow): 14, 192

Conread position: 1-323
Cow position: chr9:21888440-21888119 (view UCSC Genome Browser custom track)
Alignm length: 328
Alignm identity: 259
Alignm E-value: 0
Alignm gaps (pig, cow): 39, 210

Conread position: 1-323
Cow position: chr9:24997244-24997568 (view UCSC Genome Browser custom track)
Alignm length: 334
Alignm identity: 252
Alignm E-value: 0
Alignm gaps (pig, cow): 6, 44

Conread position: 1-323
Cow position: chr9:37069297-37069610 (view UCSC Genome Browser custom track)
Alignm length: 329
Alignm identity: 251
Alignm E-value: 0
Alignm gaps (pig, cow): 8, 203

Conread position: 1-323
Cow position: chr9:47906018-47906333 (view UCSC Genome Browser custom track)
Alignm length: 328
Alignm identity: 246
Alignm E-value: 0
Alignm gaps (pig, cow): 39, 71

Conread position: 1-323
Cow position: chr9:56032057-56032366 (view UCSC Genome Browser custom track)
Alignm length: 326
Alignm identity: 239
Alignm E-value: 0
Alignm gaps (pig, cow): 37, 65

Conread position: 1-323
Cow position: chr9:61997324-61997654 (view UCSC Genome Browser custom track)
Alignm length: 335
Alignm identity: 256
Alignm E-value: 0
Alignm gaps (pig, cow): 36, 192

Conread position: 1-324
Cow position: chr9:20416240-20416558 (view UCSC Genome Browser custom track)
Alignm length: 332
Alignm identity: 250
Alignm E-value: 0
Alignm gaps (pig, cow): 36, 14

Conread position: 1-324
Cow position: chr9:33093216-33092907 (view UCSC Genome Browser custom track)
Alignm length: 328
Alignm identity: 237
Alignm E-value: 0
Alignm gaps (pig, cow): 6, 37

Conread position: 1-325
Cow position: chr9:3070151-3070465 (view UCSC Genome Browser custom track)
Alignm length: 332
Alignm identity: 261
Alignm E-value: 0
Alignm gaps (pig, cow): 16, 98

Conread position: 1-325
Cow position: chr9:5327523-5327205 (view UCSC Genome Browser custom track)
Alignm length: 326
Alignm identity: 255
Alignm E-value: 0
Alignm gaps (pig, cow): 36, 13

Conread position: 1-325
Cow position: chr9:5433903-5433579 (view UCSC Genome Browser custom track)
Alignm length: 333
Alignm identity: 263
Alignm E-value: 0
Alignm gaps (pig, cow): 36, 13

Conread position: 1-325
Cow position: chr9:20848208-20847882 (view UCSC Genome Browser custom track)
Alignm length: 333
Alignm identity: 228
Alignm E-value: 6e-39
Alignm gaps (pig, cow): 22, 300

Conread position: 1-325
Cow position: chr9:20942340-20942669 (view UCSC Genome Browser custom track)
Alignm length: 335
Alignm identity: 228
Alignm E-value: 1e-35
Alignm gaps (pig, cow): 37, 24

Conread position: 1-325
Cow position: chr9:21459885-21460204 (view UCSC Genome Browser custom track)
Alignm length: 330
Alignm identity: 234
Alignm E-value: 4.2039e-45
Alignm gaps (pig, cow): 10, 131

Conread position: 1-325
Cow position: chr9:32306968-32307284 (view UCSC Genome Browser custom track)
Alignm length: 327
Alignm identity: 244
Alignm E-value: 0
Alignm gaps (pig, cow): 36, 13

Conread position: 1-325
Cow position: chr9:41680006-41679694 (view UCSC Genome Browser custom track)
Alignm length: 327
Alignm identity: 250
Alignm E-value: 0
Alignm gaps (pig, cow): 38, 58

Conread position: 1-325
Cow position: chr9:43037755-43037430 (view UCSC Genome Browser custom track)
Alignm length: 333
Alignm identity: 225
Alignm E-value: 1e-33
Alignm gaps (pig, cow): 12, 150

Conread position: 1-325
Cow position: chr9:44914824-44915150 (view UCSC Genome Browser custom track)
Alignm length: 336
Alignm identity: 256
Alignm E-value: 0
Alignm gaps (pig, cow): 36, 75

Conread position: 1-329
Cow position: chr9:62442553-62442233 (view UCSC Genome Browser custom track)
Alignm length: 331
Alignm identity: 236
Alignm E-value: 0
Alignm gaps (pig, cow): 183, 42

Conread position: 1-334
Cow position: chr9:29006832-29006495 (view UCSC Genome Browser custom track)
Alignm length: 341
Alignm identity: 248
Alignm E-value: 0
Alignm gaps (pig, cow): 13, 65

Conread position: 1-336
Cow position: chr9:9461383-9461720 (view UCSC Genome Browser custom track)
Alignm length: 340
Alignm identity: 246
Alignm E-value: 0
Alignm gaps (pig, cow): 13, 249

Conread position: 1-340
Cow position: chr9:36490623-36490969 (view UCSC Genome Browser custom track)
Alignm length: 350
Alignm identity: 246
Alignm E-value: 0
Alignm gaps (pig, cow): 9, 80

Conread position: 1-354
Cow position: chr9:19637367-19637707 (view UCSC Genome Browser custom track)
Alignm length: 359
Alignm identity: 233
Alignm E-value: 4e-24
Alignm gaps (pig, cow): 36, 102

Conread position: 1-356
Cow position: chr9:38793291-38792930 (view UCSC Genome Browser custom track)
Alignm length: 368
Alignm identity: 259
Alignm E-value: 0
Alignm gaps (pig, cow): 12, 216

Conread position: 1-361
Cow position: chr9:32732413-32732760 (view UCSC Genome Browser custom track)
Alignm length: 370
Alignm identity: 276
Alignm E-value: 0
Alignm gaps (pig, cow): 13, 95

Conread position: 1-362
Cow position: chr9:5226893-5227257 (view UCSC Genome Browser custom track)
Alignm length: 373
Alignm identity: 268
Alignm E-value: 0
Alignm gaps (pig, cow): 36, 207

Conread position: 1-362
Cow position: chr9:5756731-5757071 (view UCSC Genome Browser custom track)
Alignm length: 365
Alignm identity: 268
Alignm E-value: 0
Alignm gaps (pig, cow): 8, 132

Conread position: 1-362
Cow position: chr9:9402913-9403261 (view UCSC Genome Browser custom track)
Alignm length: 366
Alignm identity: 253
Alignm E-value: 3.00004e-41
Alignm gaps (pig, cow): 14, 51

Conread position: 1-362
Cow position: chr9:52578261-52578629 (view UCSC Genome Browser custom track)
Alignm length: 373
Alignm identity: 267
Alignm E-value: 0
Alignm gaps (pig, cow): 6, 160

Conread position: 1-363
Cow position: chr9:4630374-4630021 (view UCSC Genome Browser custom track)
Alignm length: 368
Alignm identity: 245
Alignm E-value: 1e-33
Alignm gaps (pig, cow): 8, 48

Conread position: 1-363
Cow position: chr9:5246120-5245770 (view UCSC Genome Browser custom track)
Alignm length: 371
Alignm identity: 276
Alignm E-value: 0
Alignm gaps (pig, cow): 36, 88

Conread position: 1-363
Cow position: chr9:37017156-37016815 (view UCSC Genome Browser custom track)
Alignm length: 369
Alignm identity: 268
Alignm E-value: 0
Alignm gaps (pig, cow): 13, 166

Conread position: 1-363
Cow position: chr9:40542386-40542053 (view UCSC Genome Browser custom track)
Alignm length: 366
Alignm identity: 266
Alignm E-value: 0
Alignm gaps (pig, cow): 16, 72

Conread position: 1-363
Cow position: chr9:43871244-43870892 (view UCSC Genome Browser custom track)
Alignm length: 368
Alignm identity: 285
Alignm E-value: 0
Alignm gaps (pig, cow): 6, 62

Conread position: 1-363
Cow position: chr9:54528787-54528431 (view UCSC Genome Browser custom track)
Alignm length: 370
Alignm identity: 278
Alignm E-value: 0
Alignm gaps (pig, cow): 11, 219

Conread position: 1-363
Cow position: chr9:55084025-55084384 (view UCSC Genome Browser custom track)
Alignm length: 374
Alignm identity: 287
Alignm E-value: 0
Alignm gaps (pig, cow): 8, 139

Conread position: 1-363
Cow position: chr9:61739188-61738839 (view UCSC Genome Browser custom track)
Alignm length: 366
Alignm identity: 261
Alignm E-value: 0
Alignm gaps (pig, cow): 36, 77

Conread position: 1-364
Cow position: chr9:22443340-22443711 (view UCSC Genome Browser custom track)
Alignm length: 383
Alignm identity: 283
Alignm E-value: 0
Alignm gaps (pig, cow): 36, 232

Conread position: 1-365
Cow position: chr9:36445893-36445530 (view UCSC Genome Browser custom track)
Alignm length: 374
Alignm identity: 283
Alignm E-value: 0
Alignm gaps (pig, cow): 36, 48

Conread position: 1-365
Cow position: chr9:50080774-50081125 (view UCSC Genome Browser custom track)
Alignm length: 369
Alignm identity: 282
Alignm E-value: 0
Alignm gaps (pig, cow): 14, 207

Conread position: 1-369
Cow position: chr9:34689340-34689686 (view UCSC Genome Browser custom track)
Alignm length: 374
Alignm identity: 254
Alignm E-value: 8e-31
Alignm gaps (pig, cow): 11, 59

Conread position: 1-378
Cow position: chr9:24887469-24887105 (view UCSC Genome Browser custom track)
Alignm length: 386
Alignm identity: 278
Alignm E-value: 0
Alignm gaps (pig, cow): 36, 13

Conread position: 2-247
Cow position: chr9:32812617-32812374 (view UCSC Genome Browser custom track)
Alignm length: 252
Alignm identity: 196
Alignm E-value: 0
Alignm gaps (pig, cow): 35, 11

Conread position: 2-304
Cow position: chr9:26065148-26065454 (view UCSC Genome Browser custom track)
Alignm length: 315
Alignm identity: 208
Alignm E-value: 9e-22
Alignm gaps (pig, cow): 13, 84

Conread position: 2-307
Cow position: chr9:22638370-22638067 (view UCSC Genome Browser custom track)
Alignm length: 310
Alignm identity: 228
Alignm E-value: 0
Alignm gaps (pig, cow): 35, 89

Conread position: 2-307
Cow position: chr9:41317697-41318008 (view UCSC Genome Browser custom track)
Alignm length: 313
Alignm identity: 204
Alignm E-value: 2e-28
Alignm gaps (pig, cow): 35, 239

Conread position: 2-307
Cow position: chr9:54924897-54924583 (view UCSC Genome Browser custom track)
Alignm length: 315
Alignm identity: 216
Alignm E-value: 6e-39
Alignm gaps (pig, cow): 12, 0

Conread position: 2-319
Cow position: chr9:44710092-44709782 (view UCSC Genome Browser custom track)
Alignm length: 319
Alignm identity: 229
Alignm E-value: 0
Alignm gaps (pig, cow): 126, 34

Conread position: 2-322
Cow position: chr9:28983452-28983133 (view UCSC Genome Browser custom track)
Alignm length: 328
Alignm identity: 235
Alignm E-value: 0
Alignm gaps (pig, cow): 12, 131

Conread position: 2-323
Cow position: chr9:4646058-4646376 (view UCSC Genome Browser custom track)
Alignm length: 326
Alignm identity: 244
Alignm E-value: 0
Alignm gaps (pig, cow): 35, 98

Conread position: 2-323
Cow position: chr9:29684416-29684093 (view UCSC Genome Browser custom track)
Alignm length: 331
Alignm identity: 233
Alignm E-value: 8.99634e-43
Alignm gaps (pig, cow): 35, 14

Conread position: 2-325
Cow position: chr9:18110595-18110917 (view UCSC Genome Browser custom track)
Alignm length: 329
Alignm identity: 217
Alignm E-value: 9e-32
Alignm gaps (pig, cow): 35, 273

Conread position: 2-325
Cow position: chr9:33598251-33597933 (view UCSC Genome Browser custom track)
Alignm length: 327
Alignm identity: 260
Alignm E-value: 0
Alignm gaps (pig, cow): 35, 204

Conread position: 2-338
Cow position: chr9:28747251-28747585 (view UCSC Genome Browser custom track)
Alignm length: 342
Alignm identity: 247
Alignm E-value: 0
Alignm gaps (pig, cow): 5, 107

Conread position: 2-338
Cow position: chr9:52001278-52000954 (view UCSC Genome Browser custom track)
Alignm length: 344
Alignm identity: 249
Alignm E-value: 0
Alignm gaps (pig, cow): 11, 29

Conread position: 2-343
Cow position: chr9:1950190-1949847 (view UCSC Genome Browser custom track)
Alignm length: 354
Alignm identity: 273
Alignm E-value: 0
Alignm gaps (pig, cow): 12, 50

Conread position: 2-355
Cow position: chr9:31347224-31346863 (view UCSC Genome Browser custom track)
Alignm length: 364
Alignm identity: 262
Alignm E-value: 0
Alignm gaps (pig, cow): 39, 130

Conread position: 2-356
Cow position: chr9:26057177-26057518 (view UCSC Genome Browser custom track)
Alignm length: 363
Alignm identity: 261
Alignm E-value: 2.94273e-44
Alignm gaps (pig, cow): 13, 45

Conread position: 3-222
Cow position: chr9:41995983-41995758 (view UCSC Genome Browser custom track)
Alignm length: 227
Alignm identity: 181
Alignm E-value: 0
Alignm gaps (pig, cow): 34, 219

Conread position: 3-233
Cow position: chr9:16182221-16182448 (view UCSC Genome Browser custom track)
Alignm length: 232
Alignm identity: 164
Alignm E-value: 3e-32
Alignm gaps (pig, cow): 35, 185

Conread position: 3-291
Cow position: chr9:5393320-5393042 (view UCSC Genome Browser custom track)
Alignm length: 295
Alignm identity: 225
Alignm E-value: 0
Alignm gaps (pig, cow): 34, 135

Conread position: 3-312
Cow position: chr9:64637814-64637512 (view UCSC Genome Browser custom track)
Alignm length: 314
Alignm identity: 210
Alignm E-value: 2e-30
Alignm gaps (pig, cow): 34, 123

Conread position: 3-318
Cow position: chr9:7866334-7866028 (view UCSC Genome Browser custom track)
Alignm length: 322
Alignm identity: 226
Alignm E-value: 1e-35
Alignm gaps (pig, cow): 36, 29

Conread position: 3-343
Cow position: chr9:27697459-27697795 (view UCSC Genome Browser custom track)
Alignm length: 351
Alignm identity: 258
Alignm E-value: 0
Alignm gaps (pig, cow): 11, 108

Conread position: 3-359
Cow position: chr9:13205301-13205657 (view UCSC Genome Browser custom track)
Alignm length: 365
Alignm identity: 238
Alignm E-value: 3e-32
Alignm gaps (pig, cow): 34, 48

Conread position: 4-256
Cow position: chr9:27076982-27077226 (view UCSC Genome Browser custom track)
Alignm length: 255
Alignm identity: 189
Alignm E-value: 8.00001e-41
Alignm gaps (pig, cow): 10, 82

Conread position: 4-312
Cow position: chr9:20900862-20901168 (view UCSC Genome Browser custom track)
Alignm length: 319
Alignm identity: 224
Alignm E-value: 5e-37
Alignm gaps (pig, cow): 33, 62

Conread position: 4-356
Cow position: chr9:64050287-64050649 (view UCSC Genome Browser custom track)
Alignm length: 366
Alignm identity: 272
Alignm E-value: 0
Alignm gaps (pig, cow): 33, 230

Conread position: 5-319
Cow position: chr9:39578001-39577692 (view UCSC Genome Browser custom track)
Alignm length: 323
Alignm identity: 240
Alignm E-value: 0
Alignm gaps (pig, cow): 32, 93

Conread position: 6-142
Cow position: chr9:20465447-20465588 (view UCSC Genome Browser custom track)
Alignm length: 142
Alignm identity: 114
Alignm E-value: 2e-28
Alignm gaps (pig, cow): 31, 0

Conread position: 6-185
Cow position: chr9:37141493-37141317 (view UCSC Genome Browser custom track)
Alignm length: 182
Alignm identity: 138
Alignm E-value: 7e-30
Alignm gaps (pig, cow): 32, 18

Conread position: 6-271
Cow position: chr9:38193267-38193010 (view UCSC Genome Browser custom track)
Alignm length: 270
Alignm identity: 185
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 13, 101

Conread position: 6-299
Cow position: chr9:9416141-9416422 (view UCSC Genome Browser custom track)
Alignm length: 297
Alignm identity: 236
Alignm E-value: 0
Alignm gaps (pig, cow): 31, 70

Conread position: 6-309
Cow position: chr9:47472962-47472649 (view UCSC Genome Browser custom track)
Alignm length: 315
Alignm identity: 233
Alignm E-value: 0
Alignm gaps (pig, cow): 31, 281

Conread position: 6-318
Cow position: chr9:5268822-5268507 (view UCSC Genome Browser custom track)
Alignm length: 323
Alignm identity: 224
Alignm E-value: 1e-35
Alignm gaps (pig, cow): 33, 55

Conread position: 6-319
Cow position: chr9:6933806-6934120 (view UCSC Genome Browser custom track)
Alignm length: 321
Alignm identity: 244
Alignm E-value: 0
Alignm gaps (pig, cow): 33, 59

Conread position: 6-319
Cow position: chr9:25964558-25964880 (view UCSC Genome Browser custom track)
Alignm length: 323
Alignm identity: 226
Alignm E-value: 9.80909e-45
Alignm gaps (pig, cow): 31, 0

Conread position: 6-319
Cow position: chr9:26404055-26403738 (view UCSC Genome Browser custom track)
Alignm length: 321
Alignm identity: 247
Alignm E-value: 0
Alignm gaps (pig, cow): 31, 211

Conread position: 6-320
Cow position: chr9:7363293-7362980 (view UCSC Genome Browser custom track)
Alignm length: 322
Alignm identity: 245
Alignm E-value: 0
Alignm gaps (pig, cow): 31, 165

Conread position: 6-323
Cow position: chr9:17929039-17928706 (view UCSC Genome Browser custom track)
Alignm length: 336
Alignm identity: 250
Alignm E-value: 0
Alignm gaps (pig, cow): 7, 236

Conread position: 6-323
Cow position: chr9:28948117-28947811 (view UCSC Genome Browser custom track)
Alignm length: 319
Alignm identity: 233
Alignm E-value: 0
Alignm gaps (pig, cow): 33, 10

Conread position: 6-356
Cow position: chr9:44467083-44467415 (view UCSC Genome Browser custom track)
Alignm length: 357
Alignm identity: 271
Alignm E-value: 0
Alignm gaps (pig, cow): 31, 186

Conread position: 6-367
Cow position: chr9:10144206-10144564 (view UCSC Genome Browser custom track)
Alignm length: 374
Alignm identity: 264
Alignm E-value: 2.94273e-44
Alignm gaps (pig, cow): 31, 223

Conread position: 7-142
Cow position: chr9:42956626-42956486 (view UCSC Genome Browser custom track)
Alignm length: 141
Alignm identity: 106
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 28, 0

Conread position: 7-175
Cow position: chr9:975280-975101 (view UCSC Genome Browser custom track)
Alignm length: 180
Alignm identity: 131
Alignm E-value: 9e-22
Alignm gaps (pig, cow): 30, 0

Conread position: 7-256
Cow position: chr9:34000352-34000604 (view UCSC Genome Browser custom track)
Alignm length: 259
Alignm identity: 197
Alignm E-value: 2.94273e-44
Alignm gaps (pig, cow): 31, 11

Conread position: 7-299
Cow position: chr9:36827390-36827108 (view UCSC Genome Browser custom track)
Alignm length: 294
Alignm identity: 210
Alignm E-value: 8.00001e-41
Alignm gaps (pig, cow): 30, 62

Conread position: 7-309
Cow position: chr9:20318313-20318609 (view UCSC Genome Browser custom track)
Alignm length: 307
Alignm identity: 223
Alignm E-value: 0
Alignm gaps (pig, cow): 30, 141

Conread position: 7-339
Cow position: chr9:9443332-9443667 (view UCSC Genome Browser custom track)
Alignm length: 342
Alignm identity: 263
Alignm E-value: 0
Alignm gaps (pig, cow): 30, 212

Conread position: 8-179
Cow position: chr9:8546582-8546412 (view UCSC Genome Browser custom track)
Alignm length: 173
Alignm identity: 143
Alignm E-value: 3.00018e-42
Alignm gaps (pig, cow): 29, 141

Conread position: 8-182
Cow position: chr9:53608130-53608306 (view UCSC Genome Browser custom track)
Alignm length: 179
Alignm identity: 135
Alignm E-value: 7e-30
Alignm gaps (pig, cow): 78, 28

Conread position: 8-202
Cow position: chr9:42585362-42585563 (view UCSC Genome Browser custom track)
Alignm length: 204
Alignm identity: 160
Alignm E-value: 5e-37
Alignm gaps (pig, cow): 31, 43

Conread position: 8-207
Cow position: chr9:20393864-20394057 (view UCSC Genome Browser custom track)
Alignm length: 203
Alignm identity: 150
Alignm E-value: 2e-27
Alignm gaps (pig, cow): 30, 49

Conread position: 8-220
Cow position: chr9:41782159-41781948 (view UCSC Genome Browser custom track)
Alignm length: 215
Alignm identity: 148
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 30, 83

Conread position: 8-232
Cow position: chr9:42998207-42998431 (view UCSC Genome Browser custom track)
Alignm length: 229
Alignm identity: 180
Alignm E-value: 0
Alignm gaps (pig, cow): 30, 45

Conread position: 8-250
Cow position: chr9:35305856-35306096 (view UCSC Genome Browser custom track)
Alignm length: 248
Alignm identity: 194
Alignm E-value: 0
Alignm gaps (pig, cow): 29, 88

Conread position: 8-270
Cow position: chr9:54997759-54998027 (view UCSC Genome Browser custom track)
Alignm length: 273
Alignm identity: 212
Alignm E-value: 0
Alignm gaps (pig, cow): 29, 181

Conread position: 8-275
Cow position: chr9:4128520-4128784 (view UCSC Genome Browser custom track)
Alignm length: 270
Alignm identity: 193
Alignm E-value: 2e-40
Alignm gaps (pig, cow): 29, 193

Conread position: 8-280
Cow position: chr9:29108801-29108529 (view UCSC Genome Browser custom track)
Alignm length: 277
Alignm identity: 201
Alignm E-value: 2.99878e-43
Alignm gaps (pig, cow): 29, 43

Conread position: 8-289
Cow position: chr9:49983428-49983707 (view UCSC Genome Browser custom track)
Alignm length: 286
Alignm identity: 204
Alignm E-value: 7e-40
Alignm gaps (pig, cow): 29, 91

Conread position: 8-296
Cow position: chr9:3387954-3387665 (view UCSC Genome Browser custom track)
Alignm length: 292
Alignm identity: 222
Alignm E-value: 0
Alignm gaps (pig, cow): 29, 22

Conread position: 8-297
Cow position: chr9:6225188-6225479 (view UCSC Genome Browser custom track)
Alignm length: 294
Alignm identity: 236
Alignm E-value: 0
Alignm gaps (pig, cow): 29, 211

Conread position: 8-298
Cow position: chr9:42498093-42497795 (view UCSC Genome Browser custom track)
Alignm length: 300
Alignm identity: 235
Alignm E-value: 0
Alignm gaps (pig, cow): 29, 238

Conread position: 8-302
Cow position: chr9:38344158-38343860 (view UCSC Genome Browser custom track)
Alignm length: 303
Alignm identity: 243
Alignm E-value: 0
Alignm gaps (pig, cow): 29, 215

Conread position: 8-307
Cow position: chr9:43912193-43911892 (view UCSC Genome Browser custom track)
Alignm length: 308
Alignm identity: 207
Alignm E-value: 2e-29
Alignm gaps (pig, cow): 27, 115

Conread position: 8-309
Cow position: chr9:10011064-10010773 (view UCSC Genome Browser custom track)
Alignm length: 307
Alignm identity: 230
Alignm E-value: 0
Alignm gaps (pig, cow): 29, 75

Conread position: 8-309
Cow position: chr9:43207115-43207411 (view UCSC Genome Browser custom track)
Alignm length: 310
Alignm identity: 228
Alignm E-value: 9.94922e-44
Alignm gaps (pig, cow): 80, 28

Conread position: 8-316
Cow position: chr9:41789542-41789240 (view UCSC Genome Browser custom track)
Alignm length: 310
Alignm identity: 243
Alignm E-value: 0
Alignm gaps (pig, cow): 176, 67

Conread position: 8-318
Cow position: chr9:8099558-8099869 (view UCSC Genome Browser custom track)
Alignm length: 319
Alignm identity: 214
Alignm E-value: 7e-30
Alignm gaps (pig, cow): 29, 112

Conread position: 8-318
Cow position: chr9:19714333-19714034 (view UCSC Genome Browser custom track)
Alignm length: 313
Alignm identity: 243
Alignm E-value: 0
Alignm gaps (pig, cow): 29, 62

Conread position: 8-319
Cow position: chr9:7634531-7634224 (view UCSC Genome Browser custom track)
Alignm length: 314
Alignm identity: 221
Alignm E-value: 4.2039e-45
Alignm gaps (pig, cow): 29, 66

Conread position: 8-319
Cow position: chr9:54610967-54611282 (view UCSC Genome Browser custom track)
Alignm length: 322
Alignm identity: 240
Alignm E-value: 0
Alignm gaps (pig, cow): 29, 161

Conread position: 8-320
Cow position: chr9:5501115-5500805 (view UCSC Genome Browser custom track)
Alignm length: 317
Alignm identity: 237
Alignm E-value: 0
Alignm gaps (pig, cow): 29, 81

Conread position: 8-320
Cow position: chr9:20321852-20322141 (view UCSC Genome Browser custom track)
Alignm length: 315
Alignm identity: 234
Alignm E-value: 0
Alignm gaps (pig, cow): 24, 75

Conread position: 8-320
Cow position: chr9:35167432-35167128 (view UCSC Genome Browser custom track)
Alignm length: 315
Alignm identity: 252
Alignm E-value: 0
Alignm gaps (pig, cow): 29, 67

Conread position: 8-320
Cow position: chr9:35904487-35904793 (view UCSC Genome Browser custom track)
Alignm length: 316
Alignm identity: 246
Alignm E-value: 0
Alignm gaps (pig, cow): 29, 98

Conread position: 8-320
Cow position: chr9:39681620-39681291 (view UCSC Genome Browser custom track)
Alignm length: 333
Alignm identity: 245
Alignm E-value: 0
Alignm gaps (pig, cow): 29, 44

Conread position: 8-321
Cow position: chr9:8998619-8998300 (view UCSC Genome Browser custom track)
Alignm length: 323
Alignm identity: 243
Alignm E-value: 0
Alignm gaps (pig, cow): 29, 51

Conread position: 8-325
Cow position: chr9:8636916-8636614 (view UCSC Genome Browser custom track)
Alignm length: 322
Alignm identity: 217
Alignm E-value: 2e-28
Alignm gaps (pig, cow): 32, 74

Conread position: 8-331
Cow position: chr9:30402156-30402482 (view UCSC Genome Browser custom track)
Alignm length: 333
Alignm identity: 245
Alignm E-value: 0
Alignm gaps (pig, cow): 29, 103

Conread position: 8-338
Cow position: chr9:32371496-32371816 (view UCSC Genome Browser custom track)
Alignm length: 333
Alignm identity: 244
Alignm E-value: 0
Alignm gaps (pig, cow): 29, 182

Conread position: 8-338
Cow position: chr9:64091952-64091615 (view UCSC Genome Browser custom track)
Alignm length: 340
Alignm identity: 244
Alignm E-value: 0
Alignm gaps (pig, cow): 29, 197

Conread position: 8-356
Cow position: chr9:11068205-11068554 (view UCSC Genome Browser custom track)
Alignm length: 359
Alignm identity: 257
Alignm E-value: 0
Alignm gaps (pig, cow): 30, 50

Conread position: 8-363
Cow position: chr9:1520467-1520822 (view UCSC Genome Browser custom track)
Alignm length: 369
Alignm identity: 281
Alignm E-value: 0
Alignm gaps (pig, cow): 31, 14

Conread position: 8-363
Cow position: chr9:5161802-5162143 (view UCSC Genome Browser custom track)
Alignm length: 363
Alignm identity: 272
Alignm E-value: 0
Alignm gaps (pig, cow): 29, 77

Conread position: 8-363
Cow position: chr9:5836426-5836062 (view UCSC Genome Browser custom track)
Alignm length: 372
Alignm identity: 274
Alignm E-value: 0
Alignm gaps (pig, cow): 29, 109

Conread position: 8-363
Cow position: chr9:6952354-6952018 (view UCSC Genome Browser custom track)
Alignm length: 365
Alignm identity: 257
Alignm E-value: 1e-36
Alignm gaps (pig, cow): 25, 16

Conread position: 8-363
Cow position: chr9:8288881-8288535 (view UCSC Genome Browser custom track)
Alignm length: 359
Alignm identity: 269
Alignm E-value: 0
Alignm gaps (pig, cow): 29, 290

Conread position: 8-363
Cow position: chr9:8338294-8337944 (view UCSC Genome Browser custom track)
Alignm length: 362
Alignm identity: 257
Alignm E-value: 0
Alignm gaps (pig, cow): 29, 138

Conread position: 8-363
Cow position: chr9:17310298-17310644 (view UCSC Genome Browser custom track)
Alignm length: 362
Alignm identity: 270
Alignm E-value: 0
Alignm gaps (pig, cow): 29, 58

Conread position: 8-365
Cow position: chr9:49764920-49764563 (view UCSC Genome Browser custom track)
Alignm length: 366
Alignm identity: 280
Alignm E-value: 0
Alignm gaps (pig, cow): 29, 125

Conread position: 8-367
Cow position: chr9:8534419-8534783 (view UCSC Genome Browser custom track)
Alignm length: 370
Alignm identity: 283
Alignm E-value: 0
Alignm gaps (pig, cow): 29, 172

Conread position: 8-367
Cow position: chr9:9552351-9551992 (view UCSC Genome Browser custom track)
Alignm length: 365
Alignm identity: 261
Alignm E-value: 0
Alignm gaps (pig, cow): 29, 123

Conread position: 8-368
Cow position: chr9:41283290-41282927 (view UCSC Genome Browser custom track)
Alignm length: 377
Alignm identity: 285
Alignm E-value: 0
Alignm gaps (pig, cow): 33, 45

Conread position: 9-142
Cow position: chr9:44416978-44417110 (view UCSC Genome Browser custom track)
Alignm length: 134
Alignm identity: 104
Alignm E-value: 4e-25
Alignm gaps (pig, cow): 31, 0

Conread position: 9-176
Cow position: chr9:22616886-22616719 (view UCSC Genome Browser custom track)
Alignm length: 169
Alignm identity: 131
Alignm E-value: 3e-33
Alignm gaps (pig, cow): 28, 106

Conread position: 9-205
Cow position: chr9:20318814-20319015 (view UCSC Genome Browser custom track)
Alignm length: 206
Alignm identity: 149
Alignm E-value: 5e-26
Alignm gaps (pig, cow): 32, 67

Conread position: 9-249
Cow position: chr9:22227823-22228056 (view UCSC Genome Browser custom track)
Alignm length: 243
Alignm identity: 185
Alignm E-value: 2.99878e-43
Alignm gaps (pig, cow): 28, 79

Conread position: 9-265
Cow position: chr9:26391031-26390776 (view UCSC Genome Browser custom track)
Alignm length: 260
Alignm identity: 200
Alignm E-value: 0
Alignm gaps (pig, cow): 28, 204

Conread position: 9-282
Cow position: chr9:18162893-18163170 (view UCSC Genome Browser custom track)
Alignm length: 283
Alignm identity: 214
Alignm E-value: 0
Alignm gaps (pig, cow): 28, 19

Conread position: 9-318
Cow position: chr9:29191603-29191301 (view UCSC Genome Browser custom track)
Alignm length: 316
Alignm identity: 211
Alignm E-value: 5e-26
Alignm gaps (pig, cow): 8, 67

Conread position: 9-319
Cow position: chr9:17740681-17740988 (view UCSC Genome Browser custom track)
Alignm length: 316
Alignm identity: 226
Alignm E-value: 1.4013e-45
Alignm gaps (pig, cow): 28, 186

Conread position: 9-319
Cow position: chr9:52724953-52725263 (view UCSC Genome Browser custom track)
Alignm length: 317
Alignm identity: 204
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 28, 165

Conread position: 9-323
Cow position: chr9:8724059-8723743 (view UCSC Genome Browser custom track)
Alignm length: 321
Alignm identity: 238
Alignm E-value: 0
Alignm gaps (pig, cow): 28, 155

Conread position: 9-325
Cow position: chr9:5052976-5053287 (view UCSC Genome Browser custom track)
Alignm length: 322
Alignm identity: 210
Alignm E-value: 4e-25
Alignm gaps (pig, cow): 28, 135

Conread position: 9-325
Cow position: chr9:23388415-23388725 (view UCSC Genome Browser custom track)
Alignm length: 319
Alignm identity: 224
Alignm E-value: 9.80909e-45
Alignm gaps (pig, cow): 28, 191

Conread position: 9-357
Cow position: chr9:3220386-3220059 (view UCSC Genome Browser custom track)
Alignm length: 351
Alignm identity: 256
Alignm E-value: 0
Alignm gaps (pig, cow): 30, 63

Conread position: 9-367
Cow position: chr9:64155593-64155938 (view UCSC Genome Browser custom track)
Alignm length: 365
Alignm identity: 270
Alignm E-value: 0
Alignm gaps (pig, cow): 28, 186

Conread position: 10-270
Cow position: chr9:34919004-34919258 (view UCSC Genome Browser custom track)
Alignm length: 264
Alignm identity: 198
Alignm E-value: 2.94273e-44
Alignm gaps (pig, cow): 27, 101

Conread position: 10-271
Cow position: chr9:20810799-20811064 (view UCSC Genome Browser custom track)
Alignm length: 268
Alignm identity: 182
Alignm E-value: 7e-30
Alignm gaps (pig, cow): 27, 170

Conread position: 10-305
Cow position: chr9:30162424-30162123 (view UCSC Genome Browser custom track)
Alignm length: 304
Alignm identity: 205
Alignm E-value: 1e-32
Alignm gaps (pig, cow): 22, 41

Conread position: 10-319
Cow position: chr9:35375686-35375379 (view UCSC Genome Browser custom track)
Alignm length: 313
Alignm identity: 233
Alignm E-value: 0
Alignm gaps (pig, cow): 27, 97

Conread position: 10-332
Cow position: chr9:9595692-9596012 (view UCSC Genome Browser custom track)
Alignm length: 327
Alignm identity: 230
Alignm E-value: 0
Alignm gaps (pig, cow): 28, 188

Conread position: 10-362
Cow position: chr9:38846087-38846415 (view UCSC Genome Browser custom track)
Alignm length: 359
Alignm identity: 267
Alignm E-value: 0
Alignm gaps (pig, cow): 27, 121

Conread position: 10-363
Cow position: chr9:34374667-34375007 (view UCSC Genome Browser custom track)
Alignm length: 359
Alignm identity: 256
Alignm E-value: 0
Alignm gaps (pig, cow): 28, 53

Conread position: 10-364
Cow position: chr9:42445720-42446067 (view UCSC Genome Browser custom track)
Alignm length: 359
Alignm identity: 277
Alignm E-value: 0
Alignm gaps (pig, cow): 28, 88

Conread position: 11-299
Cow position: chr9:34742466-34742751 (view UCSC Genome Browser custom track)
Alignm length: 296
Alignm identity: 200
Alignm E-value: 5e-27
Alignm gaps (pig, cow): 14, 95

Conread position: 11-322
Cow position: chr9:32676947-32676627 (view UCSC Genome Browser custom track)
Alignm length: 323
Alignm identity: 247
Alignm E-value: 0
Alignm gaps (pig, cow): 29, 210

Conread position: 12-290
Cow position: chr9:31626409-31626131 (view UCSC Genome Browser custom track)
Alignm length: 285
Alignm identity: 208
Alignm E-value: 9.94922e-44
Alignm gaps (pig, cow): 25, 114

Conread position: 12-339
Cow position: chr9:18216840-18217165 (view UCSC Genome Browser custom track)
Alignm length: 334
Alignm identity: 254
Alignm E-value: 0
Alignm gaps (pig, cow): 25, 157

Conread position: 13-289
Cow position: chr9:50702857-50703128 (view UCSC Genome Browser custom track)
Alignm length: 284
Alignm identity: 202
Alignm E-value: 3e-33
Alignm gaps (pig, cow): 73, 17

Conread position: 14-319
Cow position: chr9:55890067-55889767 (view UCSC Genome Browser custom track)
Alignm length: 313
Alignm identity: 233
Alignm E-value: 0
Alignm gaps (pig, cow): 23, 152

Conread position: 14-363
Cow position: chr9:11313250-11313597 (view UCSC Genome Browser custom track)
Alignm length: 357
Alignm identity: 262
Alignm E-value: 0
Alignm gaps (pig, cow): 34, 15

Conread position: 17-331
Cow position: chr9:59386522-59386826 (view UCSC Genome Browser custom track)
Alignm length: 319
Alignm identity: 245
Alignm E-value: 0
Alignm gaps (pig, cow): 20, 63

Conread position: 18-324
Cow position: chr9:58979655-58979349 (view UCSC Genome Browser custom track)
Alignm length: 313
Alignm identity: 235
Alignm E-value: 0
Alignm gaps (pig, cow): 19, 203

Conread position: 18-363
Cow position: chr9:33681938-33681576 (view UCSC Genome Browser custom track)
Alignm length: 373
Alignm identity: 275
Alignm E-value: 0
Alignm gaps (pig, cow): 21, 49

Conread position: 19-325
Cow position: chr9:31814125-31814439 (view UCSC Genome Browser custom track)
Alignm length: 318
Alignm identity: 236
Alignm E-value: 0
Alignm gaps (pig, cow): 18, 80

Conread position: 21-312
Cow position: chr9:61544900-61544614 (view UCSC Genome Browser custom track)
Alignm length: 294
Alignm identity: 202
Alignm E-value: 1e-35
Alignm gaps (pig, cow): 16, 180

Conread position: 21-363
Cow position: chr9:50139532-50139202 (view UCSC Genome Browser custom track)
Alignm length: 349
Alignm identity: 264
Alignm E-value: 0
Alignm gaps (pig, cow): 17, 59

Conread position: 22-319
Cow position: chr9:20579370-20579641 (view UCSC Genome Browser custom track)
Alignm length: 301
Alignm identity: 211
Alignm E-value: 2e-28
Alignm gaps (pig, cow): 15, 58

Conread position: 24-256
Cow position: chr9:25657762-25657525 (view UCSC Genome Browser custom track)
Alignm length: 241
Alignm identity: 176
Alignm E-value: 1e-34
Alignm gaps (pig, cow): 14, 162

Conread position: 24-325
Cow position: chr9:5209832-5209527 (view UCSC Genome Browser custom track)
Alignm length: 309
Alignm identity: 227
Alignm E-value: 0
Alignm gaps (pig, cow): 13, 168

Conread position: 25-318
Cow position: chr9:61493274-61492986 (view UCSC Genome Browser custom track)
Alignm length: 302
Alignm identity: 210
Alignm E-value: 3e-32
Alignm gaps (pig, cow): 12, 163

Conread position: 27-312
Cow position: chr9:9573580-9573283 (view UCSC Genome Browser custom track)
Alignm length: 298
Alignm identity: 198
Alignm E-value: 2e-28
Alignm gaps (pig, cow): 11, 0

Conread position: 27-323
Cow position: chr9:388770-389066 (view UCSC Genome Browser custom track)
Alignm length: 306
Alignm identity: 214
Alignm E-value: 5e-37
Alignm gaps (pig, cow): 10, 64

Conread position: 27-356
Cow position: chr9:8563086-8562734 (view UCSC Genome Browser custom track)
Alignm length: 355
Alignm identity: 258
Alignm E-value: 0
Alignm gaps (pig, cow): 10, 273

Conread position: 30-256
Cow position: chr9:51005129-51004910 (view UCSC Genome Browser custom track)
Alignm length: 229
Alignm identity: 162
Alignm E-value: 5e-27
Alignm gaps (pig, cow): 7, 23

Conread position: 30-260
Cow position: chr9:40604192-40603957 (view UCSC Genome Browser custom track)
Alignm length: 239
Alignm identity: 183
Alignm E-value: 8.99634e-43
Alignm gaps (pig, cow): 7, 192

Conread position: 30-319
Cow position: chr9:766908-767198 (view UCSC Genome Browser custom track)
Alignm length: 296
Alignm identity: 203
Alignm E-value: 4e-34
Alignm gaps (pig, cow): 7, 179

Conread position: 30-319
Cow position: chr9:1973183-1972901 (view UCSC Genome Browser custom track)
Alignm length: 292
Alignm identity: 222
Alignm E-value: 0
Alignm gaps (pig, cow): 98, 185

Conread position: 31-319
Cow position: chr9:43757764-43757490 (view UCSC Genome Browser custom track)
Alignm length: 295
Alignm identity: 201
Alignm E-value: 4e-24
Alignm gaps (pig, cow): 6, 66

Conread position: 31-338
Cow position: chr9:49710085-49709782 (view UCSC Genome Browser custom track)
Alignm length: 316
Alignm identity: 234
Alignm E-value: 0
Alignm gaps (pig, cow): 6, 152

Conread position: 32-363
Cow position: chr9:6840251-6839910 (view UCSC Genome Browser custom track)
Alignm length: 350
Alignm identity: 263
Alignm E-value: 0
Alignm gaps (pig, cow): 5, 307

Conread position: 36-267
Cow position: chr9:29092039-29091797 (view UCSC Genome Browser custom track)
Alignm length: 244
Alignm identity: 183
Alignm E-value: 2e-39
Alignm gaps (pig, cow): 52, 184

Conread position: 36-309
Cow position: chr9:52131253-52130973 (view UCSC Genome Browser custom track)
Alignm length: 287
Alignm identity: 212
Alignm E-value: 3.00004e-41
Alignm gaps (pig, cow): 88, 16

Conread position: 36-319
Cow position: chr9:11319397-11319681 (view UCSC Genome Browser custom track)
Alignm length: 286
Alignm identity: 217
Alignm E-value: 0
Alignm gaps (pig, cow): 41, 153

Conread position: 36-360
Cow position: chr9:15225055-15225376 (view UCSC Genome Browser custom track)
Alignm length: 337
Alignm identity: 244
Alignm E-value: 9.80909e-45
Alignm gaps (pig, cow): 88, 62

Conread position: 36-363
Cow position: chr9:3186377-3186043 (view UCSC Genome Browser custom track)
Alignm length: 345
Alignm identity: 245
Alignm E-value: 8.99634e-43
Alignm gaps (pig, cow): 52, 196

Conread position: 37-318
Cow position: chr9:52619886-52619603 (view UCSC Genome Browser custom track)
Alignm length: 292
Alignm identity: 204
Alignm E-value: 9e-32
Alignm gaps (pig, cow): 49, 130

Conread position: 39-204
Cow position: chr9:31292920-31292754 (view UCSC Genome Browser custom track)
Alignm length: 167
Alignm identity: 121
Alignm E-value: 1e-25
Alignm gaps (pig, cow): 142, 0

Conread position: 39-309
Cow position: chr9:27780996-27780723 (view UCSC Genome Browser custom track)
Alignm length: 279
Alignm identity: 190
Alignm E-value: 2e-28
Alignm gaps (pig, cow): 47, 156

Conread position: 40-217
Cow position: chr9:3520710-3520891 (view UCSC Genome Browser custom track)
Alignm length: 184
Alignm identity: 131
Alignm E-value: 9e-22
Alignm gaps (pig, cow): 46, 160

Conread position: 40-279
Cow position: chr9:32711163-32710922 (view UCSC Genome Browser custom track)
Alignm length: 246
Alignm identity: 191
Alignm E-value: 0
Alignm gaps (pig, cow): 20, 61

Conread position: 40-282
Cow position: chr9:33038227-33038471 (view UCSC Genome Browser custom track)
Alignm length: 254
Alignm identity: 191
Alignm E-value: 2e-38
Alignm gaps (pig, cow): 46, 130

Conread position: 40-308
Cow position: chr9:62729339-62729068 (view UCSC Genome Browser custom track)
Alignm length: 274
Alignm identity: 178
Alignm E-value: 4e-24
Alignm gaps (pig, cow): 46, 155

Conread position: 40-309
Cow position: chr9:7006657-7006928 (view UCSC Genome Browser custom track)
Alignm length: 276
Alignm identity: 178
Alignm E-value: 8e-21
Alignm gaps (pig, cow): 46, 155

Conread position: 40-309
Cow position: chr9:8236162-8236438 (view UCSC Genome Browser custom track)
Alignm length: 279
Alignm identity: 183
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 46, 182

Conread position: 40-309
Cow position: chr9:10082547-10082819 (view UCSC Genome Browser custom track)
Alignm length: 276
Alignm identity: 180
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 46, 155

Conread position: 40-309
Cow position: chr9:16180150-16180421 (view UCSC Genome Browser custom track)
Alignm length: 276
Alignm identity: 178
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 46, 201

Conread position: 40-309
Cow position: chr9:22755022-22754750 (view UCSC Genome Browser custom track)
Alignm length: 277
Alignm identity: 183
Alignm E-value: 4e-24
Alignm gaps (pig, cow): 44, 155

Conread position: 40-309
Cow position: chr9:40302894-40303176 (view UCSC Genome Browser custom track)
Alignm length: 283
Alignm identity: 189
Alignm E-value: 5e-27
Alignm gaps (pig, cow): 46, 0

Conread position: 40-309
Cow position: chr9:40676142-40675880 (view UCSC Genome Browser custom track)
Alignm length: 272
Alignm identity: 178
Alignm E-value: 9e-22
Alignm gaps (pig, cow): 90, 26

Conread position: 40-309
Cow position: chr9:45899257-45899527 (view UCSC Genome Browser custom track)
Alignm length: 276
Alignm identity: 179
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 46, 81

Conread position: 40-309
Cow position: chr9:49206168-49206440 (view UCSC Genome Browser custom track)
Alignm length: 279
Alignm identity: 187
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 46, 163

Conread position: 40-309
Cow position: chr9:51317989-51317712 (view UCSC Genome Browser custom track)
Alignm length: 278
Alignm identity: 182
Alignm E-value: 4e-25
Alignm gaps (pig, cow): 34, 0

Conread position: 41-309
Cow position: chr9:6339032-6338756 (view UCSC Genome Browser custom track)
Alignm length: 277
Alignm identity: 198
Alignm E-value: 8.00001e-41
Alignm gaps (pig, cow): 45, 0

Conread position: 41-318
Cow position: chr9:35128724-35128433 (view UCSC Genome Browser custom track)
Alignm length: 294
Alignm identity: 207
Alignm E-value: 1e-33
Alignm gaps (pig, cow): 85, 43

Conread position: 42-255
Cow position: chr9:50667653-50667438 (view UCSC Genome Browser custom track)
Alignm length: 217
Alignm identity: 170
Alignm E-value: 1.4013e-45
Alignm gaps (pig, cow): 83, 171

Conread position: 42-291
Cow position: chr9:58972262-58972518 (view UCSC Genome Browser custom track)
Alignm length: 260
Alignm identity: 187
Alignm E-value: 1e-33
Alignm gaps (pig, cow): 41, 138

Conread position: 42-306
Cow position: chr9:634927-634660 (view UCSC Genome Browser custom track)
Alignm length: 273
Alignm identity: 180
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 44, 188

Conread position: 44-356
Cow position: chr9:53762928-53762606 (view UCSC Genome Browser custom track)
Alignm length: 325
Alignm identity: 224
Alignm E-value: 2e-37
Alignm gaps (pig, cow): 42, 125

Conread position: 46-259
Cow position: chr9:6117922-6118136 (view UCSC Genome Browser custom track)
Alignm length: 221
Alignm identity: 164
Alignm E-value: 3e-32
Alignm gaps (pig, cow): 40, 32

Conread position: 47-241
Cow position: chr9:58734599-58734399 (view UCSC Genome Browser custom track)
Alignm length: 203
Alignm identity: 160
Alignm E-value: 6e-38
Alignm gaps (pig, cow): 16, 173

Conread position: 47-312
Cow position: chr9:27279542-27279269 (view UCSC Genome Browser custom track)
Alignm length: 277
Alignm identity: 207
Alignm E-value: 1.4013e-45
Alignm gaps (pig, cow): 36, 163

Conread position: 49-281
Cow position: chr9:43048404-43048628 (view UCSC Genome Browser custom track)
Alignm length: 237
Alignm identity: 169
Alignm E-value: 2e-28
Alignm gaps (pig, cow): 75, 154

Conread position: 50-241
Cow position: chr9:41469637-41469835 (view UCSC Genome Browser custom track)
Alignm length: 200
Alignm identity: 144
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 17, 168

Conread position: 50-356
Cow position: chr9:48628251-48627940 (view UCSC Genome Browser custom track)
Alignm length: 315
Alignm identity: 211
Alignm E-value: 1e-33
Alignm gaps (pig, cow): 31, 6

Conread position: 50-363
Cow position: chr9:28354739-28354434 (view UCSC Genome Browser custom track)
Alignm length: 315
Alignm identity: 243
Alignm E-value: 0
Alignm gaps (pig, cow): 217, 129

Conread position: 51-259
Cow position: chr9:1879596-1879393 (view UCSC Genome Browser custom track)
Alignm length: 210
Alignm identity: 158
Alignm E-value: 1e-36
Alignm gaps (pig, cow): 78, 134

Conread position: 51-314
Cow position: chr9:44833745-44834005 (view UCSC Genome Browser custom track)
Alignm length: 268
Alignm identity: 187
Alignm E-value: 1e-32
Alignm gaps (pig, cow): 71, 47

Conread position: 51-318
Cow position: chr9:26440576-26440858 (view UCSC Genome Browser custom track)
Alignm length: 283
Alignm identity: 202
Alignm E-value: 2e-37
Alignm gaps (pig, cow): 38, 0

Conread position: 51-356
Cow position: chr9:17799850-17799544 (view UCSC Genome Browser custom track)
Alignm length: 315
Alignm identity: 238
Alignm E-value: 0
Alignm gaps (pig, cow): 35, 24

Conread position: 55-363
Cow position: chr9:43444011-43443721 (view UCSC Genome Browser custom track)
Alignm length: 311
Alignm identity: 230
Alignm E-value: 1.4013e-45
Alignm gaps (pig, cow): 70, 43

Conread position: 56-249
Cow position: chr9:11198127-11198320 (view UCSC Genome Browser custom track)
Alignm length: 197
Alignm identity: 153
Alignm E-value: 5e-37
Alignm gaps (pig, cow): 8, 44

Conread position: 58-236
Cow position: chr9:29578457-29578282 (view UCSC Genome Browser custom track)
Alignm length: 182
Alignm identity: 136
Alignm E-value: 5e-27
Alignm gaps (pig, cow): 74, 39

Conread position: 58-365
Cow position: chr9:11123279-11123568 (view UCSC Genome Browser custom track)
Alignm length: 309
Alignm identity: 224
Alignm E-value: 3.00018e-42
Alignm gaps (pig, cow): 132, 17

Conread position: 59-325
Cow position: chr9:16811447-16811707 (view UCSC Genome Browser custom track)
Alignm length: 271
Alignm identity: 192
Alignm E-value: 4e-34
Alignm gaps (pig, cow): 27, 41

Conread position: 59-356
Cow position: chr9:9815630-9815325 (view UCSC Genome Browser custom track)
Alignm length: 309
Alignm identity: 221
Alignm E-value: 3.00018e-42
Alignm gaps (pig, cow): 17, 175

Conread position: 60-312
Cow position: chr9:52637945-52638207 (view UCSC Genome Browser custom track)
Alignm length: 263
Alignm identity: 183
Alignm E-value: 1e-32
Alignm gaps (pig, cow): 26, 0

Conread position: 63-356
Cow position: chr9:62668464-62668162 (view UCSC Genome Browser custom track)
Alignm length: 307
Alignm identity: 214
Alignm E-value: 4e-36
Alignm gaps (pig, cow): 23, 103

Conread position: 65-259
Cow position: chr9:3847874-3847681 (view UCSC Genome Browser custom track)
Alignm length: 200
Alignm identity: 152
Alignm E-value: 3e-31
Alignm gaps (pig, cow): 47, 33

Conread position: 65-319
Cow position: chr9:19493253-19493513 (view UCSC Genome Browser custom track)
Alignm length: 261
Alignm identity: 197
Alignm E-value: 0
Alignm gaps (pig, cow): 21, 0

Conread position: 66-318
Cow position: chr9:47500003-47500258 (view UCSC Genome Browser custom track)
Alignm length: 258
Alignm identity: 185
Alignm E-value: 6e-38
Alignm gaps (pig, cow): 58, 5

Conread position: 67-307
Cow position: chr9:25805038-25804797 (view UCSC Genome Browser custom track)
Alignm length: 244
Alignm identity: 176
Alignm E-value: 2e-38
Alignm gaps (pig, cow): 59, 146

Conread position: 68-255
Cow position: chr9:14358365-14358180 (view UCSC Genome Browser custom track)
Alignm length: 190
Alignm identity: 142
Alignm E-value: 8e-31
Alignm gaps (pig, cow): 61, 133

Conread position: 68-274
Cow position: chr9:55893259-55893054 (view UCSC Genome Browser custom track)
Alignm length: 211
Alignm identity: 147
Alignm E-value: 3e-23
Alignm gaps (pig, cow): 63, 110

Conread position: 68-312
Cow position: chr9:53138928-53139172 (view UCSC Genome Browser custom track)
Alignm length: 250
Alignm identity: 181
Alignm E-value: 1e-35
Alignm gaps (pig, cow): 58, 145

Conread position: 71-363
Cow position: chr9:37678087-37677811 (view UCSC Genome Browser custom track)
Alignm length: 298
Alignm identity: 213
Alignm E-value: 1e-34
Alignm gaps (pig, cow): 53, 79

Conread position: 72-339
Cow position: chr9:50543221-50543494 (view UCSC Genome Browser custom track)
Alignm length: 277
Alignm identity: 211
Alignm E-value: 0
Alignm gaps (pig, cow): 21, 53

Conread position: 75-249
Cow position: chr9:49279670-49279487 (view UCSC Genome Browser custom track)
Alignm length: 184
Alignm identity: 144
Alignm E-value: 1e-33
Alignm gaps (pig, cow): 109, 0

Conread position: 76-323
Cow position: chr9:32115418-32115650 (view UCSC Genome Browser custom track)
Alignm length: 249
Alignm identity: 179
Alignm E-value: 2e-30
Alignm gaps (pig, cow): 108, 20

Conread position: 78-312
Cow position: chr9:28451965-28452208 (view UCSC Genome Browser custom track)
Alignm length: 244
Alignm identity: 168
Alignm E-value: 2e-27
Alignm gaps (pig, cow): 102, 0

Conread position: 78-319
Cow position: chr9:30124113-30123882 (view UCSC Genome Browser custom track)
Alignm length: 244
Alignm identity: 173
Alignm E-value: 2e-30
Alignm gaps (pig, cow): 143, 122

Conread position: 79-281
Cow position: chr9:40543130-40543334 (view UCSC Genome Browser custom track)
Alignm length: 207
Alignm identity: 151
Alignm E-value: 8e-31
Alignm gaps (pig, cow): 45, 63

Conread position: 79-338
Cow position: chr9:24873020-24872771 (view UCSC Genome Browser custom track)
Alignm length: 261
Alignm identity: 193
Alignm E-value: 3.00018e-42
Alignm gaps (pig, cow): 135, 23

Conread position: 80-315
Cow position: chr9:1371123-1370885 (view UCSC Genome Browser custom track)
Alignm length: 244
Alignm identity: 185
Alignm E-value: 3.00018e-42
Alignm gaps (pig, cow): 44, 17

Conread position: 80-322
Cow position: chr9:19067968-19067733 (view UCSC Genome Browser custom track)
Alignm length: 244
Alignm identity: 165
Alignm E-value: 4e-25
Alignm gaps (pig, cow): 101, 71

Conread position: 80-325
Cow position: chr9:19555565-19555323 (view UCSC Genome Browser custom track)
Alignm length: 249
Alignm identity: 165
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 35, 101

Conread position: 83-308
Cow position: chr9:34106910-34106681 (view UCSC Genome Browser custom track)
Alignm length: 230
Alignm identity: 158
Alignm E-value: 6e-28
Alignm gaps (pig, cow): 65, 0

Conread position: 84-276
Cow position: chr9:32692307-32692107 (view UCSC Genome Browser custom track)
Alignm length: 201
Alignm identity: 141
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 45, 0

Conread position: 84-287
Cow position: chr9:62151288-62151096 (view UCSC Genome Browser custom track)
Alignm length: 205
Alignm identity: 145
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 95, 74

Conread position: 84-290
Cow position: chr9:8525021-8524821 (view UCSC Genome Browser custom track)
Alignm length: 212
Alignm identity: 158
Alignm E-value: 2e-29
Alignm gaps (pig, cow): 99, 21

Conread position: 84-381
Cow position: chr9:51720715-51721008 (view UCSC Genome Browser custom track)
Alignm length: 305
Alignm identity: 234
Alignm E-value: 0
Alignm gaps (pig, cow): 45, 122

Conread position: 85-276
Cow position: chr9:31270965-31270775 (view UCSC Genome Browser custom track)
Alignm length: 194
Alignm identity: 146
Alignm E-value: 3e-33
Alignm gaps (pig, cow): 99, 126

Conread position: 87-362
Cow position: chr9:12225797-12226059 (view UCSC Genome Browser custom track)
Alignm length: 281
Alignm identity: 209
Alignm E-value: 6e-39
Alignm gaps (pig, cow): 15, 9

Conread position: 87-364
Cow position: chr9:11168914-11168646 (view UCSC Genome Browser custom track)
Alignm length: 280
Alignm identity: 218
Alignm E-value: 0
Alignm gaps (pig, cow): 37, 125

Conread position: 88-338
Cow position: chr9:55321820-55321572 (view UCSC Genome Browser custom track)
Alignm length: 254
Alignm identity: 184
Alignm E-value: 6e-39
Alignm gaps (pig, cow): 96, 59

Conread position: 89-309
Cow position: chr9:8901042-8901264 (view UCSC Genome Browser custom track)
Alignm length: 225
Alignm identity: 167
Alignm E-value: 2e-37
Alignm gaps (pig, cow): 42, 23

Conread position: 90-298
Cow position: chr9:44921210-44921419 (view UCSC Genome Browser custom track)
Alignm length: 211
Alignm identity: 143
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 125, 116

Conread position: 90-309
Cow position: chr9:41518437-41518663 (view UCSC Genome Browser custom track)
Alignm length: 227
Alignm identity: 155
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 34, 0

Conread position: 91-320
Cow position: chr9:47445847-47446064 (view UCSC Genome Browser custom track)
Alignm length: 232
Alignm identity: 171
Alignm E-value: 3e-33
Alignm gaps (pig, cow): 41, 103

Conread position: 91-363
Cow position: chr9:12281149-12280888 (view UCSC Genome Browser custom track)
Alignm length: 276
Alignm identity: 189
Alignm E-value: 2e-27
Alignm gaps (pig, cow): 33, 72

Conread position: 92-323
Cow position: chr9:40215422-40215196 (view UCSC Genome Browser custom track)
Alignm length: 236
Alignm identity: 179
Alignm E-value: 2e-39
Alignm gaps (pig, cow): 32, 122

Conread position: 93-293
Cow position: chr9:41853620-41853411 (view UCSC Genome Browser custom track)
Alignm length: 210
Alignm identity: 146
Alignm E-value: 3e-23
Alignm gaps (pig, cow): 31, 0

Conread position: 98-307
Cow position: chr9:47590808-47591016 (view UCSC Genome Browser custom track)
Alignm length: 217
Alignm identity: 155
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 26, 7

Conread position: 98-331
Cow position: chr9:25557138-25556913 (view UCSC Genome Browser custom track)
Alignm length: 236
Alignm identity: 168
Alignm E-value: 2e-30
Alignm gaps (pig, cow): 123, 56

Conread position: 99-259
Cow position: chr9:4323986-4324144 (view UCSC Genome Browser custom track)
Alignm length: 161
Alignm identity: 117
Alignm E-value: 4e-24
Alignm gaps (pig, cow): 110, 0

Conread position: 100-317
Cow position: chr9:5456003-5456220 (view UCSC Genome Browser custom track)
Alignm length: 223
Alignm identity: 159
Alignm E-value: 2e-28
Alignm gaps (pig, cow): 24, 110

Conread position: 101-323
Cow position: chr9:49292976-49293194 (view UCSC Genome Browser custom track)
Alignm length: 223
Alignm identity: 156
Alignm E-value: 2e-30
Alignm gaps (pig, cow): 100, 0

Conread position: 102-319
Cow position: chr9:26477385-26477169 (view UCSC Genome Browser custom track)
Alignm length: 221
Alignm identity: 173
Alignm E-value: 9.80909e-45
Alignm gaps (pig, cow): 28, 66

Conread position: 102-322
Cow position: chr9:31557560-31557778 (view UCSC Genome Browser custom track)
Alignm length: 224
Alignm identity: 163
Alignm E-value: 1e-32
Alignm gaps (pig, cow): 22, 65

Conread position: 102-362
Cow position: chr9:31216257-31215998 (view UCSC Genome Browser custom track)
Alignm length: 265
Alignm identity: 182
Alignm E-value: 3e-31
Alignm gaps (pig, cow): 22, 82

Conread position: 102-363
Cow position: chr9:50202738-50202480 (view UCSC Genome Browser custom track)
Alignm length: 264
Alignm identity: 191
Alignm E-value: 3.00004e-41
Alignm gaps (pig, cow): 217, 102

Conread position: 103-319
Cow position: chr9:12910234-12910448 (view UCSC Genome Browser custom track)
Alignm length: 218
Alignm identity: 153
Alignm E-value: 2e-29
Alignm gaps (pig, cow): 78, 99

Conread position: 104-309
Cow position: chr9:1755975-1756182 (view UCSC Genome Browser custom track)
Alignm length: 211
Alignm identity: 155
Alignm E-value: 3e-31
Alignm gaps (pig, cow): 20, 98

Conread position: 105-323
Cow position: chr9:43937105-43936894 (view UCSC Genome Browser custom track)
Alignm length: 220
Alignm identity: 160
Alignm E-value: 1e-32
Alignm gaps (pig, cow): 80, 107

Conread position: 106-249
Cow position: chr9:18029229-18029380 (view UCSC Genome Browser custom track)
Alignm length: 152
Alignm identity: 117
Alignm E-value: 3e-23
Alignm gaps (pig, cow): 75, 0

Conread position: 107-320
Cow position: chr9:19034504-19034309 (view UCSC Genome Browser custom track)
Alignm length: 216
Alignm identity: 159
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 17, 92

Conread position: 109-323
Cow position: chr9:36843949-36843742 (view UCSC Genome Browser custom track)
Alignm length: 221
Alignm identity: 168
Alignm E-value: 1e-34
Alignm gaps (pig, cow): 20, 96

Conread position: 110-312
Cow position: chr9:39211768-39211565 (view UCSC Genome Browser custom track)
Alignm length: 208
Alignm identity: 145
Alignm E-value: 9e-22
Alignm gaps (pig, cow): 16, 107

Conread position: 110-324
Cow position: chr9:11303917-11304127 (view UCSC Genome Browser custom track)
Alignm length: 219
Alignm identity: 169
Alignm E-value: 2e-38
Alignm gaps (pig, cow): 14, 73

Conread position: 111-318
Cow position: chr9:39011317-39011515 (view UCSC Genome Browser custom track)
Alignm length: 209
Alignm identity: 150
Alignm E-value: 1e-25
Alignm gaps (pig, cow): 99, 54

Conread position: 113-363
Cow position: chr9:6596078-6596313 (view UCSC Genome Browser custom track)
Alignm length: 251
Alignm identity: 172
Alignm E-value: 4e-25
Alignm gaps (pig, cow): 19, 0

Conread position: 115-339
Cow position: chr9:33114501-33114280 (view UCSC Genome Browser custom track)
Alignm length: 225
Alignm identity: 167
Alignm E-value: 7e-40
Alignm gaps (pig, cow): 17, 0

Conread position: 118-363
Cow position: chr9:63153667-63153897 (view UCSC Genome Browser custom track)
Alignm length: 247
Alignm identity: 169
Alignm E-value: 8e-21
Alignm gaps (pig, cow): 232, 59

Conread position: 122-334
Cow position: chr9:26310651-26310444 (view UCSC Genome Browser custom track)
Alignm length: 214
Alignm identity: 159
Alignm E-value: 1e-34
Alignm gaps (pig, cow): 67, 40

Conread position: 122-363
Cow position: chr9:34284096-34283871 (view UCSC Genome Browser custom track)
Alignm length: 242
Alignm identity: 192
Alignm E-value: 0
Alignm gaps (pig, cow): 63, 0

Conread position: 123-318
Cow position: chr9:48730575-48730385 (view UCSC Genome Browser custom track)
Alignm length: 198
Alignm identity: 141
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 61, 37

Conread position: 123-319
Cow position: chr9:1867597-1867404 (view UCSC Genome Browser custom track)
Alignm length: 198
Alignm identity: 149
Alignm E-value: 1e-34
Alignm gaps (pig, cow): 61, 92

Conread position: 123-319
Cow position: chr9:3774309-3774118 (view UCSC Genome Browser custom track)
Alignm length: 199
Alignm identity: 153
Alignm E-value: 1e-34
Alignm gaps (pig, cow): 10, 93

Conread position: 123-319
Cow position: chr9:42478321-42478529 (view UCSC Genome Browser custom track)
Alignm length: 211
Alignm identity: 160
Alignm E-value: 1e-33
Alignm gaps (pig, cow): 70, 106

Conread position: 123-355
Cow position: chr9:4262945-4263176 (view UCSC Genome Browser custom track)
Alignm length: 238
Alignm identity: 172
Alignm E-value: 1e-32
Alignm gaps (pig, cow): 61, 130

Conread position: 124-325
Cow position: chr9:51557352-51557539 (view UCSC Genome Browser custom track)
Alignm length: 203
Alignm identity: 153
Alignm E-value: 2e-27
Alignm gaps (pig, cow): 60, 34

Conread position: 124-362
Cow position: chr9:52839740-52839961 (view UCSC Genome Browser custom track)
Alignm length: 240
Alignm identity: 177
Alignm E-value: 3e-32
Alignm gaps (pig, cow): 60, 85

Conread position: 125-317
Cow position: chr9:32669802-32669992 (view UCSC Genome Browser custom track)
Alignm length: 194
Alignm identity: 145
Alignm E-value: 3e-33
Alignm gaps (pig, cow): 59, 86

Conread position: 126-355
Cow position: chr9:33697173-33696949 (view UCSC Genome Browser custom track)
Alignm length: 232
Alignm identity: 171
Alignm E-value: 1e-35
Alignm gaps (pig, cow): 58, 36

Conread position: 127-320
Cow position: chr9:32348678-32348862 (view UCSC Genome Browser custom track)
Alignm length: 194
Alignm identity: 137
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 60, 0

Conread position: 127-323
Cow position: chr9:52513309-52513499 (view UCSC Genome Browser custom track)
Alignm length: 198
Alignm identity: 153
Alignm E-value: 4e-36
Alignm gaps (pig, cow): 77, 60

Conread position: 127-363
Cow position: chr9:10819689-10819911 (view UCSC Genome Browser custom track)
Alignm length: 238
Alignm identity: 179
Alignm E-value: 5e-37
Alignm gaps (pig, cow): 54, 78

Conread position: 128-319
Cow position: chr9:60081048-60080855 (view UCSC Genome Browser custom track)
Alignm length: 197
Alignm identity: 144
Alignm E-value: 6e-28
Alignm gaps (pig, cow): 56, 77

Conread position: 130-309
Cow position: chr9:11969328-11969149 (view UCSC Genome Browser custom track)
Alignm length: 181
Alignm identity: 131
Alignm E-value: 2e-27
Alignm gaps (pig, cow): 51, 75

Conread position: 130-357
Cow position: chr9:41486100-41486326 (view UCSC Genome Browser custom track)
Alignm length: 229
Alignm identity: 155
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 49, 185

Conread position: 132-308
Cow position: chr9:43013862-43013686 (view UCSC Genome Browser custom track)
Alignm length: 178
Alignm identity: 136
Alignm E-value: 1e-33
Alignm gaps (pig, cow): 77, 153

Conread position: 132-312
Cow position: chr9:51131601-51131420 (view UCSC Genome Browser custom track)
Alignm length: 184
Alignm identity: 129
Alignm E-value: 9e-22
Alignm gaps (pig, cow): 51, 68

Conread position: 133-317
Cow position: chr9:34410258-34410441 (view UCSC Genome Browser custom track)
Alignm length: 187
Alignm identity: 136
Alignm E-value: 5e-27
Alignm gaps (pig, cow): 51, 67

Conread position: 134-320
Cow position: chr9:31359737-31359556 (view UCSC Genome Browser custom track)
Alignm length: 189
Alignm identity: 136
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 50, 67

Conread position: 134-325
Cow position: chr9:40005612-40005421 (view UCSC Genome Browser custom track)
Alignm length: 193
Alignm identity: 151
Alignm E-value: 8.00001e-41
Alignm gaps (pig, cow): 50, 77

Conread position: 135-320
Cow position: chr9:13743797-13743978 (view UCSC Genome Browser custom track)
Alignm length: 186
Alignm identity: 133
Alignm E-value: 1e-25
Alignm gaps (pig, cow): 52, 0

Conread position: 135-323
Cow position: chr9:53326615-53326802 (view UCSC Genome Browser custom track)
Alignm length: 193
Alignm identity: 141
Alignm E-value: 5e-27
Alignm gaps (pig, cow): 53, 70

Conread position: 138-309
Cow position: chr9:5899829-5900000 (view UCSC Genome Browser custom track)
Alignm length: 175
Alignm identity: 126
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 41, 62

Conread position: 143-363
Cow position: chr9:52598597-52598804 (view UCSC Genome Browser custom track)
Alignm length: 222
Alignm identity: 157
Alignm E-value: 4e-24
Alignm gaps (pig, cow): 41, 9

Conread position: 146-323
Cow position: chr9:3343867-3343698 (view UCSC Genome Browser custom track)
Alignm length: 179
Alignm identity: 141
Alignm E-value: 3e-31
Alignm gaps (pig, cow): 56, 25

Conread position: 150-367
Cow position: chr9:9311980-9311771 (view UCSC Genome Browser custom track)
Alignm length: 220
Alignm identity: 156
Alignm E-value: 1e-25
Alignm gaps (pig, cow): 34, 19

Conread position: 161-325
Cow position: chr9:40776907-40776745 (view UCSC Genome Browser custom track)
Alignm length: 166
Alignm identity: 131
Alignm E-value: 1e-32
Alignm gaps (pig, cow): 23, 58

Conread position: 167-338
Cow position: chr9:32981968-32982140 (view UCSC Genome Browser custom track)
Alignm length: 174
Alignm identity: 122
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 101, 166

Conread position: 168-323
Cow position: chr9:55532917-55532763 (view UCSC Genome Browser custom track)
Alignm length: 156
Alignm identity: 125
Alignm E-value: 1e-34
Alignm gaps (pig, cow): 47, 0

Conread position: 168-363
Cow position: chr9:5649872-5650055 (view UCSC Genome Browser custom track)
Alignm length: 196
Alignm identity: 138
Alignm E-value: 8e-21
Alignm gaps (pig, cow): 9, 0

Conread position: 169-325
Cow position: chr9:29194921-29195077 (view UCSC Genome Browser custom track)
Alignm length: 158
Alignm identity: 114
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 49, 40

Conread position: 170-363
Cow position: chr9:12338007-12337819 (view UCSC Genome Browser custom track)
Alignm length: 198
Alignm identity: 143
Alignm E-value: 4e-24
Alignm gaps (pig, cow): 40, 25

Conread position: 173-325
Cow position: chr9:64064259-64064416 (view UCSC Genome Browser custom track)
Alignm length: 158
Alignm identity: 121
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 17, 0

Conread position: 174-331
Cow position: chr9:48100894-48100736 (view UCSC Genome Browser custom track)
Alignm length: 159
Alignm identity: 118
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 12, 0

Conread position: 176-324
Cow position: chr9:23797331-23797184 (view UCSC Genome Browser custom track)
Alignm length: 151
Alignm identity: 118
Alignm E-value: 2e-27
Alignm gaps (pig, cow): 45, 13

Conread position: 177-363
Cow position: chr9:5163891-5164068 (view UCSC Genome Browser custom track)
Alignm length: 187
Alignm identity: 139
Alignm E-value: 2e-28
Alignm gaps (pig, cow): 107, 0

Conread position: 179-363
Cow position: chr9:8834039-8834210 (view UCSC Genome Browser custom track)
Alignm length: 186
Alignm identity: 139
Alignm E-value: 4e-25
Alignm gaps (pig, cow): 36, 73

Conread position: 180-319
Cow position: chr9:29819805-29819671 (view UCSC Genome Browser custom track)
Alignm length: 140
Alignm identity: 107
Alignm E-value: 9e-22
Alignm gaps (pig, cow): 29, 0

Conread position: 194-361
Cow position: chr9:7805887-7806042 (view UCSC Genome Browser custom track)
Alignm length: 168
Alignm identity: 129
Alignm E-value: 5e-26
Alignm gaps (pig, cow): 15, 0

Conread position: 215-323
Cow position: chr9:56827538-56827425 (view UCSC Genome Browser custom track)
Alignm length: 114
Alignm identity: 93
Alignm E-value: 9e-22
Alignm gaps (pig, cow): 45, 0

Conread position: 216-338
Cow position: chr9:33347434-33347555 (view UCSC Genome Browser custom track)
Alignm length: 123
Alignm identity: 100
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 115, 0

Conread position: 216-368
Cow position: chr9:5072782-5072934 (view UCSC Genome Browser custom track)
Alignm length: 156
Alignm identity: 116
Alignm E-value: 9e-22
Alignm gaps (pig, cow): 99, 107

Conread position: 219-320
Cow position: chr9:25375683-25375783 (view UCSC Genome Browser custom track)
Alignm length: 102
Alignm identity: 84
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 78, 0

Conread position: 221-325
Cow position: chr9:13742574-13742470 (view UCSC Genome Browser custom track)
Alignm length: 105
Alignm identity: 84
Alignm E-value: 8e-21
Alignm gaps (pig, cow): 0, 0

Conread position: 229-323
Cow position: chr9:34014206-34014300 (view UCSC Genome Browser custom track)
Alignm length: 95
Alignm identity: 80
Alignm E-value: 9e-22
Alignm gaps (pig, cow): 0, 0

Show alignments to all cow chromosomes.