Cow genome map
| Conread name: | Pig4-TMW8003J24 |
| Conread position: | 1-249 |
| Cow position: | chr12:35807362-35807611 (view UCSC Genome Browser custom track) |
| Alignm length: | 253 |
| Alignm identity: | 191 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 19, 160 |
| Conread position: | 8-249 |
| Cow position: | chr12:21828779-21829018 (view UCSC Genome Browser custom track) |
| Alignm length: | 244 |
| Alignm identity: | 175 |
| Alignm E-value: | 9e-36 |
| Alignm gaps (pig, cow): | 142, 156 |
| Conread position: | 11-358 |
| Cow position: | chr12:15622758-15622395 (view UCSC Genome Browser custom track) |
| Alignm length: | 366 |
| Alignm identity: | 261 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 88, 45 |
| Conread position: | 12-202 |
| Cow position: | chr12:11498365-11498179 (view UCSC Genome Browser custom track) |
| Alignm length: | 196 |
| Alignm identity: | 142 |
| Alignm E-value: | 2e-22 |
| Alignm gaps (pig, cow): | 32, 61 |
| Conread position: | 12-206 |
| Cow position: | chr12:8943521-8943331 (view UCSC Genome Browser custom track) |
| Alignm length: | 195 |
| Alignm identity: | 140 |
| Alignm E-value: | 1e-27 |
| Alignm gaps (pig, cow): | 67, 0 |
| Conread position: | 12-245 |
| Cow position: | chr12:3757338-3757110 (view UCSC Genome Browser custom track) |
| Alignm length: | 240 |
| Alignm identity: | 179 |
| Alignm E-value: | 3e-34 |
| Alignm gaps (pig, cow): | 34, 91 |
| Conread position: | 18-248 |
| Cow position: | chr12:18769371-18769143 (view UCSC Genome Browser custom track) |
| Alignm length: | 234 |
| Alignm identity: | 175 |
| Alignm E-value: | 5e-40 |
| Alignm gaps (pig, cow): | 13, 94 |
| Conread position: | 18-249 |
| Cow position: | chr12:3212029-3212259 (view UCSC Genome Browser custom track) |
| Alignm length: | 236 |
| Alignm identity: | 176 |
| Alignm E-value: | 4e-39 |
| Alignm gaps (pig, cow): | 28, 94 |
| Conread position: | 18-362 |
| Cow position: | chr12:12939225-12938882 (view UCSC Genome Browser custom track) |
| Alignm length: | 349 |
| Alignm identity: | 252 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 84, 22 |
| Conread position: | 19-237 |
| Cow position: | chr12:30688044-30688261 (view UCSC Genome Browser custom track) |
| Alignm length: | 220 |
| Alignm identity: | 168 |
| Alignm E-value: | 2.00386e-43 |
| Alignm gaps (pig, cow): | 193, 132 |
| Conread position: | 21-248 |
| Cow position: | chr12:34103427-34103204 (view UCSC Genome Browser custom track) |
| Alignm length: | 229 |
| Alignm identity: | 172 |
| Alignm E-value: | 4.99997e-41 |
| Alignm gaps (pig, cow): | 191, 118 |
| Conread position: | 22-387 |
| Cow position: | chr12:45541442-45541816 (view UCSC Genome Browser custom track) |
| Alignm length: | 384 |
| Alignm identity: | 273 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 190, 18 |
| Conread position: | 27-248 |
| Cow position: | chr12:18417277-18417500 (view UCSC Genome Browser custom track) |
| Alignm length: | 226 |
| Alignm identity: | 168 |
| Alignm E-value: | 4e-38 |
| Alignm gaps (pig, cow): | 19, 46 |
| Conread position: | 28-204 |
| Cow position: | chr12:7131878-7131711 (view UCSC Genome Browser custom track) |
| Alignm length: | 177 |
| Alignm identity: | 142 |
| Alignm E-value: | 3e-35 |
| Alignm gaps (pig, cow): | 82, 0 |
| Conread position: | 40-385 |
| Cow position: | chr12:13657969-13657637 (view UCSC Genome Browser custom track) |
| Alignm length: | 347 |
| Alignm identity: | 240 |
| Alignm E-value: | 7.00649e-43 |
| Alignm gaps (pig, cow): | 172, 34 |
| Conread position: | 57-250 |
| Cow position: | chr12:38484654-38484459 (view UCSC Genome Browser custom track) |
| Alignm length: | 201 |
| Alignm identity: | 151 |
| Alignm E-value: | 2e-31 |
| Alignm gaps (pig, cow): | 112, 39 |
| Conread position: | 83-355 |
| Cow position: | chr12:35984901-35985181 (view UCSC Genome Browser custom track) |
| Alignm length: | 285 |
| Alignm identity: | 207 |
| Alignm E-value: | 5e-40 |
| Alignm gaps (pig, cow): | 125, 205 |
| Conread position: | 244-387 |
| Cow position: | chr12:21829041-21829181 (view UCSC Genome Browser custom track) |
| Alignm length: | 145 |
| Alignm identity: | 112 |
| Alignm E-value: | 9e-25 |
| Alignm gaps (pig, cow): | 17, 38 |
| Conread position: | 255-392 |
| Cow position: | chr12:18769090-18768957 (view UCSC Genome Browser custom track) |
| Alignm length: | 138 |
| Alignm identity: | 104 |
| Alignm E-value: | 2e-21 |
| Alignm gaps (pig, cow): | 24, 0 |
| Conread position: | 255-410 |
| Cow position: | chr12:27055586-27055735 (view UCSC Genome Browser custom track) |
| Alignm length: | 157 |
| Alignm identity: | 119 |
| Alignm E-value: | 6e-22 |
| Alignm gaps (pig, cow): | 52, 10 |
| Conread position: | 257-387 |
| Cow position: | chr12:25933666-25933791 (view UCSC Genome Browser custom track) |
| Alignm length: | 131 |
| Alignm identity: | 102 |
| Alignm E-value: | 6e-22 |
| Alignm gaps (pig, cow): | 31, 0 |
| Conread position: | 257-387 |
| Cow position: | chr12:31528874-31528747 (view UCSC Genome Browser custom track) |
| Alignm length: | 131 |
| Alignm identity: | 102 |
| Alignm E-value: | 2e-23 |
| Alignm gaps (pig, cow): | 22, 0 |
| Conread position: | 257-393 |
| Cow position: | chr12:32413497-32413629 (view UCSC Genome Browser custom track) |
| Alignm length: | 137 |
| Alignm identity: | 105 |
| Alignm E-value: | 2e-22 |
| Alignm gaps (pig, cow): | 32, 0 |
| Conread position: | 260-383 |
| Cow position: | chr12:27038757-27038638 (view UCSC Genome Browser custom track) |
| Alignm length: | 124 |
| Alignm identity: | 97 |
| Alignm E-value: | 6e-21 |
| Alignm gaps (pig, cow): | 19, 0 |
| Conread position: | 261-410 |
| Cow position: | chr12:5658759-5658614 (view UCSC Genome Browser custom track) |
| Alignm length: | 152 |
| Alignm identity: | 119 |
| Alignm E-value: | 3e-25 |
| Alignm gaps (pig, cow): | 139, 22 |
| Conread position: | 261-410 |
| Cow position: | chr12:29448631-29448776 (view UCSC Genome Browser custom track) |
| Alignm length: | 150 |
| Alignm identity: | 111 |
| Alignm E-value: | 2e-22 |
| Alignm gaps (pig, cow): | 125, 0 |
| Conread position: | 263-386 |
| Cow position: | chr12:25312385-25312268 (view UCSC Genome Browser custom track) |
| Alignm length: | 124 |
| Alignm identity: | 99 |
| Alignm E-value: | 2e-21 |
| Alignm gaps (pig, cow): | 20, 0 |
| Conread position: | 263-410 |
| Cow position: | chr12:5497838-5497697 (view UCSC Genome Browser custom track) |
| Alignm length: | 148 |
| Alignm identity: | 112 |
| Alignm E-value: | 6e-22 |
| Alignm gaps (pig, cow): | 20, 0 |
| Conread position: | 263-410 |
| Cow position: | chr12:7645821-7645678 (view UCSC Genome Browser custom track) |
| Alignm length: | 148 |
| Alignm identity: | 113 |
| Alignm E-value: | 9e-25 |
| Alignm gaps (pig, cow): | 20, 0 |
| Conread position: | 264-361 |
| Cow position: | chr12:39754271-39754365 (view UCSC Genome Browser custom track) |
| Alignm length: | 98 |
| Alignm identity: | 83 |
| Alignm E-value: | 6e-21 |
| Alignm gaps (pig, cow): | 19, 0 |
| Conread position: | 265-393 |
| Cow position: | chr12:14855800-14855924 (view UCSC Genome Browser custom track) |
| Alignm length: | 129 |
| Alignm identity: | 101 |
| Alignm E-value: | 6e-22 |
| Alignm gaps (pig, cow): | 16, 0 |
| Conread position: | 266-410 |
| Cow position: | chr12:44057506-44057649 (view UCSC Genome Browser custom track) |
| Alignm length: | 148 |
| Alignm identity: | 112 |
| Alignm E-value: | 6e-22 |
| Alignm gaps (pig, cow): | 120, 21 |
Show alignments to all cow chromosomes.