Cow genome map

Conread name: Pig4-TMW8003J24

Conread position: 1-165
Cow position: chr13:35853091-35853254 (view UCSC Genome Browser custom track)
Alignm length: 165
Alignm identity: 128
Alignm E-value: 3e-33
Alignm gaps (pig, cow): 38, 0

Conread position: 1-206
Cow position: chr13:21155230-21155433 (view UCSC Genome Browser custom track)
Alignm length: 206
Alignm identity: 150
Alignm E-value: 1e-33
Alignm gaps (pig, cow): 162, 0

Conread position: 1-270
Cow position: chr13:661374-661646 (view UCSC Genome Browser custom track)
Alignm length: 279
Alignm identity: 199
Alignm E-value: 1e-35
Alignm gaps (pig, cow): 11, 48

Conread position: 1-410
Cow position: chr13:29819977-29820392 (view UCSC Genome Browser custom track)
Alignm length: 421
Alignm identity: 291
Alignm E-value: 0
Alignm gaps (pig, cow): 19, 257

Conread position: 3-254
Cow position: chr13:9803314-9803079 (view UCSC Genome Browser custom track)
Alignm length: 254
Alignm identity: 182
Alignm E-value: 6e-30
Alignm gaps (pig, cow): 209, 46

Conread position: 10-254
Cow position: chr13:29814792-29814551 (view UCSC Genome Browser custom track)
Alignm length: 251
Alignm identity: 178
Alignm E-value: 2e-28
Alignm gaps (pig, cow): 10, 76

Conread position: 11-246
Cow position: chr13:6945622-6945386 (view UCSC Genome Browser custom track)
Alignm length: 238
Alignm identity: 180
Alignm E-value: 0
Alignm gaps (pig, cow): 88, 153

Conread position: 11-262
Cow position: chr13:33282262-33282007 (view UCSC Genome Browser custom track)
Alignm length: 259
Alignm identity: 192
Alignm E-value: 8.00001e-42
Alignm gaps (pig, cow): 139, 29

Conread position: 12-249
Cow position: chr13:55843732-55843495 (view UCSC Genome Browser custom track)
Alignm length: 243
Alignm identity: 181
Alignm E-value: 6e-40
Alignm gaps (pig, cow): 50, 105

Conread position: 12-387
Cow position: chr13:54969575-54969967 (view UCSC Genome Browser custom track)
Alignm length: 404
Alignm identity: 279
Alignm E-value: 4e-36
Alignm gaps (pig, cow): 146, 35

Conread position: 13-358
Cow position: chr13:24539742-24539377 (view UCSC Genome Browser custom track)
Alignm length: 369
Alignm identity: 262
Alignm E-value: 2.94273e-44
Alignm gaps (pig, cow): 199, 27

Conread position: 18-214
Cow position: chr13:10658535-10658340 (view UCSC Genome Browser custom track)
Alignm length: 199
Alignm identity: 140
Alignm E-value: 4e-25
Alignm gaps (pig, cow): 84, 104

Conread position: 18-236
Cow position: chr13:7262635-7262421 (view UCSC Genome Browser custom track)
Alignm length: 221
Alignm identity: 167
Alignm E-value: 5e-38
Alignm gaps (pig, cow): 194, 129

Conread position: 18-236
Cow position: chr13:24767648-24767414 (view UCSC Genome Browser custom track)
Alignm length: 237
Alignm identity: 174
Alignm E-value: 2e-30
Alignm gaps (pig, cow): 21, 162

Conread position: 18-248
Cow position: chr13:22886750-22886979 (view UCSC Genome Browser custom track)
Alignm length: 234
Alignm identity: 175
Alignm E-value: 6e-40
Alignm gaps (pig, cow): 41, 32

Conread position: 18-257
Cow position: chr13:6759548-6759786 (view UCSC Genome Browser custom track)
Alignm length: 241
Alignm identity: 182
Alignm E-value: 0
Alignm gaps (pig, cow): 194, 51

Conread position: 18-259
Cow position: chr13:58823964-58823725 (view UCSC Genome Browser custom track)
Alignm length: 242
Alignm identity: 170
Alignm E-value: 1e-35
Alignm gaps (pig, cow): 174, 0

Conread position: 19-243
Cow position: chr13:23586382-23586141 (view UCSC Genome Browser custom track)
Alignm length: 243
Alignm identity: 175
Alignm E-value: 2e-27
Alignm gaps (pig, cow): 21, 160

Conread position: 20-385
Cow position: chr13:32904972-32904620 (view UCSC Genome Browser custom track)
Alignm length: 367
Alignm identity: 236
Alignm E-value: 6e-29
Alignm gaps (pig, cow): 114, 20

Conread position: 20-410
Cow position: chr13:16327879-16327489 (view UCSC Genome Browser custom track)
Alignm length: 406
Alignm identity: 273
Alignm E-value: 9e-33
Alignm gaps (pig, cow): 132, 75

Conread position: 22-260
Cow position: chr13:41359987-41359749 (view UCSC Genome Browser custom track)
Alignm length: 244
Alignm identity: 174
Alignm E-value: 9e-33
Alignm gaps (pig, cow): 147, 95

Conread position: 23-357
Cow position: chr13:11290583-11290914 (view UCSC Genome Browser custom track)
Alignm length: 342
Alignm identity: 244
Alignm E-value: 0
Alignm gaps (pig, cow): 63, 85

Conread position: 28-358
Cow position: chr13:46985245-46984927 (view UCSC Genome Browser custom track)
Alignm length: 333
Alignm identity: 227
Alignm E-value: 4e-36
Alignm gaps (pig, cow): 31, 96

Conread position: 30-229
Cow position: chr13:23444580-23444779 (view UCSC Genome Browser custom track)
Alignm length: 201
Alignm identity: 159
Alignm E-value: 9.80909e-45
Alignm gaps (pig, cow): 182, 70

Conread position: 40-203
Cow position: chr13:24285782-24285621 (view UCSC Genome Browser custom track)
Alignm length: 164
Alignm identity: 132
Alignm E-value: 1e-36
Alignm gaps (pig, cow): 59, 0

Conread position: 40-245
Cow position: chr13:35653869-35654072 (view UCSC Genome Browser custom track)
Alignm length: 209
Alignm identity: 160
Alignm E-value: 2e-38
Alignm gaps (pig, cow): 19, 80

Conread position: 40-358
Cow position: chr13:23816531-23816844 (view UCSC Genome Browser custom track)
Alignm length: 326
Alignm identity: 235
Alignm E-value: 2.94273e-44
Alignm gaps (pig, cow): 62, 105

Conread position: 41-265
Cow position: chr13:17347026-17346805 (view UCSC Genome Browser custom track)
Alignm length: 226
Alignm identity: 167
Alignm E-value: 5e-38
Alignm gaps (pig, cow): 171, 80

Conread position: 42-245
Cow position: chr13:6894312-6894112 (view UCSC Genome Browser custom track)
Alignm length: 208
Alignm identity: 156
Alignm E-value: 2e-31
Alignm gaps (pig, cow): 60, 55

Conread position: 59-256
Cow position: chr13:4423279-4423478 (view UCSC Genome Browser custom track)
Alignm length: 201
Alignm identity: 155
Alignm E-value: 2e-39
Alignm gaps (pig, cow): 110, 43

Conread position: 60-356
Cow position: chr13:2302638-2302943 (view UCSC Genome Browser custom track)
Alignm length: 311
Alignm identity: 231
Alignm E-value: 0
Alignm gaps (pig, cow): 152, 21

Conread position: 92-244
Cow position: chr13:3796313-3796160 (view UCSC Genome Browser custom track)
Alignm length: 155
Alignm identity: 117
Alignm E-value: 1e-25
Alignm gaps (pig, cow): 100, 71

Conread position: 100-401
Cow position: chr13:14085345-14085053 (view UCSC Genome Browser custom track)
Alignm length: 307
Alignm identity: 205
Alignm E-value: 4e-25
Alignm gaps (pig, cow): 37, 55

Conread position: 110-356
Cow position: chr13:20510206-20510454 (view UCSC Genome Browser custom track)
Alignm length: 255
Alignm identity: 176
Alignm E-value: 1e-25
Alignm gaps (pig, cow): 109, 174

Conread position: 116-206
Cow position: chr13:34118153-34118242 (view UCSC Genome Browser custom track)
Alignm length: 91
Alignm identity: 79
Alignm E-value: 8e-22
Alignm gaps (pig, cow): 76, 0

Conread position: 117-249
Cow position: chr13:20180564-20180431 (view UCSC Genome Browser custom track)
Alignm length: 134
Alignm identity: 107
Alignm E-value: 5e-28
Alignm gaps (pig, cow): 95, 0

Conread position: 126-387
Cow position: chr13:26508602-26508322 (view UCSC Genome Browser custom track)
Alignm length: 287
Alignm identity: 208
Alignm E-value: 3e-32
Alignm gaps (pig, cow): 23, 69

Conread position: 257-410
Cow position: chr13:1958973-1958822 (view UCSC Genome Browser custom track)
Alignm length: 156
Alignm identity: 117
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 137, 36

Conread position: 257-437
Cow position: chr13:11768078-11768256 (view UCSC Genome Browser custom track)
Alignm length: 182
Alignm identity: 126
Alignm E-value: 7e-21
Alignm gaps (pig, cow): 132, 26

Conread position: 258-379
Cow position: chr13:35719173-35719291 (view UCSC Genome Browser custom track)
Alignm length: 122
Alignm identity: 96
Alignm E-value: 8e-22
Alignm gaps (pig, cow): 39, 0

Conread position: 258-387
Cow position: chr13:54814947-54815073 (view UCSC Genome Browser custom track)
Alignm length: 130
Alignm identity: 99
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 34, 0

Conread position: 260-387
Cow position: chr13:9083045-9083167 (view UCSC Genome Browser custom track)
Alignm length: 128
Alignm identity: 101
Alignm E-value: 8e-22
Alignm gaps (pig, cow): 28, 0

Conread position: 260-398
Cow position: chr13:22075631-22075499 (view UCSC Genome Browser custom track)
Alignm length: 139
Alignm identity: 110
Alignm E-value: 3e-24
Alignm gaps (pig, cow): 9, 0

Conread position: 261-387
Cow position: chr13:25207075-25206952 (view UCSC Genome Browser custom track)
Alignm length: 127
Alignm identity: 100
Alignm E-value: 9e-23
Alignm gaps (pig, cow): 20, 0

Conread position: 261-437
Cow position: chr13:33161035-33161205 (view UCSC Genome Browser custom track)
Alignm length: 179
Alignm identity: 130
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 141, 8

Conread position: 263-398
Cow position: chr13:20156446-20156315 (view UCSC Genome Browser custom track)
Alignm length: 136
Alignm identity: 108
Alignm E-value: 1e-25
Alignm gaps (pig, cow): 20, 0

Conread position: 263-398
Cow position: chr13:32167352-32167482 (view UCSC Genome Browser custom track)
Alignm length: 136
Alignm identity: 107
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 17, 0

Conread position: 263-409
Cow position: chr13:22887030-22887171 (view UCSC Genome Browser custom track)
Alignm length: 147
Alignm identity: 116
Alignm E-value: 5e-27
Alignm gaps (pig, cow): 20, 0

Conread position: 263-410
Cow position: chr13:22082349-22082204 (view UCSC Genome Browser custom track)
Alignm length: 149
Alignm identity: 113
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 139, 18

Conread position: 263-413
Cow position: chr13:17346770-17346623 (view UCSC Genome Browser custom track)
Alignm length: 152
Alignm identity: 112
Alignm E-value: 7e-21
Alignm gaps (pig, cow): 45, 24

Conread position: 263-433
Cow position: chr13:18550964-18550797 (view UCSC Genome Browser custom track)
Alignm length: 173
Alignm identity: 128
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 134, 20

Conread position: 265-439
Cow position: chr13:17991616-17991445 (view UCSC Genome Browser custom track)
Alignm length: 177
Alignm identity: 129
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 143, 23

Conread position: 266-386
Cow position: chr13:58348041-58347925 (view UCSC Genome Browser custom track)
Alignm length: 121
Alignm identity: 96
Alignm E-value: 8e-22
Alignm gaps (pig, cow): 22, 0

Conread position: 270-393
Cow position: chr13:9501635-9501754 (view UCSC Genome Browser custom track)
Alignm length: 124
Alignm identity: 98
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 21, 0

Conread position: 270-437
Cow position: chr13:46291611-46291439 (view UCSC Genome Browser custom track)
Alignm length: 177
Alignm identity: 132
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 52, 13

Conread position: 271-387
Cow position: chr13:26507886-26507773 (view UCSC Genome Browser custom track)
Alignm length: 117
Alignm identity: 93
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 12, 0

Show alignments to all cow chromosomes.