Cow genome map
| Conread name: | Pig4-TMW8003J24 |
| Conread position: | 1-245 |
| Cow position: | chr15:1830931-1830684 (view UCSC Genome Browser custom track) |
| Alignm length: | 249 |
| Alignm identity: | 186 |
| Alignm E-value: | 2.8026e-45 |
| Alignm gaps (pig, cow): | 19, 165 |
| Conread position: | 1-248 |
| Cow position: | chr15:13545461-13545229 (view UCSC Genome Browser custom track) |
| Alignm length: | 250 |
| Alignm identity: | 174 |
| Alignm E-value: | 9e-24 |
| Alignm gaps (pig, cow): | 19, 29 |
| Conread position: | 1-249 |
| Cow position: | chr15:27862964-27863205 (view UCSC Genome Browser custom track) |
| Alignm length: | 251 |
| Alignm identity: | 183 |
| Alignm E-value: | 1e-36 |
| Alignm gaps (pig, cow): | 12, 27 |
| Conread position: | 1-284 |
| Cow position: | chr15:20117475-20117197 (view UCSC Genome Browser custom track) |
| Alignm length: | 291 |
| Alignm identity: | 201 |
| Alignm E-value: | 2e-31 |
| Alignm gaps (pig, cow): | 19, 119 |
| Conread position: | 3-206 |
| Cow position: | chr15:20347615-20347412 (view UCSC Genome Browser custom track) |
| Alignm length: | 207 |
| Alignm identity: | 156 |
| Alignm E-value: | 1e-35 |
| Alignm gaps (pig, cow): | 12, 78 |
| Conread position: | 5-241 |
| Cow position: | chr15:44209931-44209694 (view UCSC Genome Browser custom track) |
| Alignm length: | 239 |
| Alignm identity: | 176 |
| Alignm E-value: | 6.00036e-42 |
| Alignm gaps (pig, cow): | 16, 167 |
| Conread position: | 12-244 |
| Cow position: | chr15:10615389-10615607 (view UCSC Genome Browser custom track) |
| Alignm length: | 234 |
| Alignm identity: | 169 |
| Alignm E-value: | 2e-29 |
| Alignm gaps (pig, cow): | 49, 33 |
| Conread position: | 12-245 |
| Cow position: | chr15:29272543-29272312 (view UCSC Genome Browser custom track) |
| Alignm length: | 235 |
| Alignm identity: | 175 |
| Alignm E-value: | 1.99965e-42 |
| Alignm gaps (pig, cow): | 200, 114 |
| Conread position: | 12-392 |
| Cow position: | chr15:9177860-9178265 (view UCSC Genome Browser custom track) |
| Alignm length: | 411 |
| Alignm identity: | 278 |
| Alignm E-value: | 9e-35 |
| Alignm gaps (pig, cow): | 35, 193 |
| Conread position: | 17-248 |
| Cow position: | chr15:15215367-15215140 (view UCSC Genome Browser custom track) |
| Alignm length: | 233 |
| Alignm identity: | 180 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 195, 93 |
| Conread position: | 18-199 |
| Cow position: | chr15:34036844-34037019 (view UCSC Genome Browser custom track) |
| Alignm length: | 183 |
| Alignm identity: | 136 |
| Alignm E-value: | 4e-28 |
| Alignm gaps (pig, cow): | 41, 122 |
| Conread position: | 18-204 |
| Cow position: | chr15:38323176-38322997 (view UCSC Genome Browser custom track) |
| Alignm length: | 187 |
| Alignm identity: | 143 |
| Alignm E-value: | 3e-33 |
| Alignm gaps (pig, cow): | 125, 0 |
| Conread position: | 18-246 |
| Cow position: | chr15:16741690-16741915 (view UCSC Genome Browser custom track) |
| Alignm length: | 230 |
| Alignm identity: | 162 |
| Alignm E-value: | 2e-31 |
| Alignm gaps (pig, cow): | 28, 146 |
| Conread position: | 18-246 |
| Cow position: | chr15:53118666-53118444 (view UCSC Genome Browser custom track) |
| Alignm length: | 231 |
| Alignm identity: | 160 |
| Alignm E-value: | 1e-25 |
| Alignm gaps (pig, cow): | 129, 29 |
| Conread position: | 18-247 |
| Cow position: | chr15:17683374-17683149 (view UCSC Genome Browser custom track) |
| Alignm length: | 231 |
| Alignm identity: | 170 |
| Alignm E-value: | 4e-37 |
| Alignm gaps (pig, cow): | 194, 53 |
| Conread position: | 18-261 |
| Cow position: | chr15:11574302-11574063 (view UCSC Genome Browser custom track) |
| Alignm length: | 246 |
| Alignm identity: | 164 |
| Alignm E-value: | 8e-23 |
| Alignm gaps (pig, cow): | 104, 31 |
| Conread position: | 19-241 |
| Cow position: | chr15:11957878-11957668 (view UCSC Genome Browser custom track) |
| Alignm length: | 225 |
| Alignm identity: | 162 |
| Alignm E-value: | 4e-27 |
| Alignm gaps (pig, cow): | 192, 34 |
| Conread position: | 20-248 |
| Cow position: | chr15:9642777-9642550 (view UCSC Genome Browser custom track) |
| Alignm length: | 233 |
| Alignm identity: | 171 |
| Alignm E-value: | 3e-36 |
| Alignm gaps (pig, cow): | 149, 20 |
| Conread position: | 21-245 |
| Cow position: | chr15:5527531-5527307 (view UCSC Genome Browser custom track) |
| Alignm length: | 226 |
| Alignm identity: | 170 |
| Alignm E-value: | 2.00386e-43 |
| Alignm gaps (pig, cow): | 187, 142 |
| Conread position: | 40-239 |
| Cow position: | chr15:4857120-4856917 (view UCSC Genome Browser custom track) |
| Alignm length: | 204 |
| Alignm identity: | 152 |
| Alignm E-value: | 9e-35 |
| Alignm gaps (pig, cow): | 61, 0 |
| Conread position: | 47-248 |
| Cow position: | chr15:22886866-22886670 (view UCSC Genome Browser custom track) |
| Alignm length: | 203 |
| Alignm identity: | 147 |
| Alignm E-value: | 2e-29 |
| Alignm gaps (pig, cow): | 164, 61 |
| Conread position: | 71-248 |
| Cow position: | chr15:36671741-36671917 (view UCSC Genome Browser custom track) |
| Alignm length: | 179 |
| Alignm identity: | 133 |
| Alignm E-value: | 2e-29 |
| Alignm gaps (pig, cow): | 77, 93 |
| Conread position: | 73-244 |
| Cow position: | chr15:27282096-27281926 (view UCSC Genome Browser custom track) |
| Alignm length: | 173 |
| Alignm identity: | 134 |
| Alignm E-value: | 3e-33 |
| Alignm gaps (pig, cow): | 135, 60 |
| Conread position: | 82-242 |
| Cow position: | chr15:50994029-50993864 (view UCSC Genome Browser custom track) |
| Alignm length: | 167 |
| Alignm identity: | 132 |
| Alignm E-value: | 6e-31 |
| Alignm gaps (pig, cow): | 13, 82 |
| Conread position: | 86-387 |
| Cow position: | chr15:27892284-27891984 (view UCSC Genome Browser custom track) |
| Alignm length: | 310 |
| Alignm identity: | 207 |
| Alignm E-value: | 4e-26 |
| Alignm gaps (pig, cow): | 126, 13 |
| Conread position: | 92-206 |
| Cow position: | chr15:10189463-10189576 (view UCSC Genome Browser custom track) |
| Alignm length: | 115 |
| Alignm identity: | 90 |
| Alignm E-value: | 6e-21 |
| Alignm gaps (pig, cow): | 71, 0 |
| Conread position: | 92-249 |
| Cow position: | chr15:12673916-12673765 (view UCSC Genome Browser custom track) |
| Alignm length: | 160 |
| Alignm identity: | 124 |
| Alignm E-value: | 3e-25 |
| Alignm gaps (pig, cow): | 153, 69 |
| Conread position: | 101-262 |
| Cow position: | chr15:22854671-22854508 (view UCSC Genome Browser custom track) |
| Alignm length: | 165 |
| Alignm identity: | 125 |
| Alignm E-value: | 4e-28 |
| Alignm gaps (pig, cow): | 111, 67 |
| Conread position: | 113-258 |
| Cow position: | chr15:33770872-33770728 (view UCSC Genome Browser custom track) |
| Alignm length: | 147 |
| Alignm identity: | 113 |
| Alignm E-value: | 1e-25 |
| Alignm gaps (pig, cow): | 99, 50 |
| Conread position: | 117-268 |
| Cow position: | chr15:23957954-23957805 (view UCSC Genome Browser custom track) |
| Alignm length: | 153 |
| Alignm identity: | 114 |
| Alignm E-value: | 3e-23 |
| Alignm gaps (pig, cow): | 95, 46 |
| Conread position: | 123-410 |
| Cow position: | chr15:23109061-23109365 (view UCSC Genome Browser custom track) |
| Alignm length: | 308 |
| Alignm identity: | 213 |
| Alignm E-value: | 6e-31 |
| Alignm gaps (pig, cow): | 76, 40 |
| Conread position: | 251-375 |
| Cow position: | chr15:38322910-38322789 (view UCSC Genome Browser custom track) |
| Alignm length: | 125 |
| Alignm identity: | 101 |
| Alignm E-value: | 3e-25 |
| Alignm gaps (pig, cow): | 32, 0 |
| Conread position: | 254-410 |
| Cow position: | chr15:20402473-20402625 (view UCSC Genome Browser custom track) |
| Alignm length: | 159 |
| Alignm identity: | 121 |
| Alignm E-value: | 3e-23 |
| Alignm gaps (pig, cow): | 146, 27 |
| Conread position: | 257-410 |
| Cow position: | chr15:31599403-31599256 (view UCSC Genome Browser custom track) |
| Alignm length: | 154 |
| Alignm identity: | 116 |
| Alignm E-value: | 8e-23 |
| Alignm gaps (pig, cow): | 30, 0 |
| Conread position: | 257-410 |
| Cow position: | chr15:37918715-37918564 (view UCSC Genome Browser custom track) |
| Alignm length: | 156 |
| Alignm identity: | 116 |
| Alignm E-value: | 7e-22 |
| Alignm gaps (pig, cow): | 143, 30 |
| Conread position: | 258-387 |
| Cow position: | chr15:17788178-17788053 (view UCSC Genome Browser custom track) |
| Alignm length: | 130 |
| Alignm identity: | 102 |
| Alignm E-value: | 8e-23 |
| Alignm gaps (pig, cow): | 25, 0 |
| Conread position: | 260-409 |
| Cow position: | chr15:31907715-31907572 (view UCSC Genome Browser custom track) |
| Alignm length: | 150 |
| Alignm identity: | 114 |
| Alignm E-value: | 2e-22 |
| Alignm gaps (pig, cow): | 27, 0 |
| Conread position: | 262-410 |
| Cow position: | chr15:39226675-39226820 (view UCSC Genome Browser custom track) |
| Alignm length: | 151 |
| Alignm identity: | 115 |
| Alignm E-value: | 2e-22 |
| Alignm gaps (pig, cow): | 107, 25 |
| Conread position: | 263-391 |
| Cow position: | chr15:22854469-22854347 (view UCSC Genome Browser custom track) |
| Alignm length: | 129 |
| Alignm identity: | 103 |
| Alignm E-value: | 3e-23 |
| Alignm gaps (pig, cow): | 20, 0 |
| Conread position: | 263-404 |
| Cow position: | chr15:3572636-3572774 (view UCSC Genome Browser custom track) |
| Alignm length: | 143 |
| Alignm identity: | 111 |
| Alignm E-value: | 3e-24 |
| Alignm gaps (pig, cow): | 100, 20 |
| Conread position: | 263-410 |
| Cow position: | chr15:8022117-8021974 (view UCSC Genome Browser custom track) |
| Alignm length: | 148 |
| Alignm identity: | 112 |
| Alignm E-value: | 9e-24 |
| Alignm gaps (pig, cow): | 24, 0 |
| Conread position: | 263-410 |
| Cow position: | chr15:47821442-47821297 (view UCSC Genome Browser custom track) |
| Alignm length: | 149 |
| Alignm identity: | 113 |
| Alignm E-value: | 3e-24 |
| Alignm gaps (pig, cow): | 126, 20 |
| Conread position: | 263-437 |
| Cow position: | chr15:23547926-23548096 (view UCSC Genome Browser custom track) |
| Alignm length: | 175 |
| Alignm identity: | 126 |
| Alignm E-value: | 3e-24 |
| Alignm gaps (pig, cow): | 20, 0 |
| Conread position: | 264-433 |
| Cow position: | chr15:10189425-10189260 (view UCSC Genome Browser custom track) |
| Alignm length: | 171 |
| Alignm identity: | 126 |
| Alignm E-value: | 3e-24 |
| Alignm gaps (pig, cow): | 149, 19 |
| Conread position: | 265-387 |
| Cow position: | chr15:14323355-14323473 (view UCSC Genome Browser custom track) |
| Alignm length: | 123 |
| Alignm identity: | 97 |
| Alignm E-value: | 2e-21 |
| Alignm gaps (pig, cow): | 18, 0 |
Show alignments to all cow chromosomes.