Cow genome map
| Conread name: | Pig4-TMW8003J24 |
| Conread position: | 1-248 |
| Cow position: | chr17:10634291-10634051 (view UCSC Genome Browser custom track) |
| Alignm length: | 250 |
| Alignm identity: | 177 |
| Alignm E-value: | 2e-32 |
| Alignm gaps (pig, cow): | 9, 41 |
| Conread position: | 1-409 |
| Cow position: | chr17:8832338-8831933 (view UCSC Genome Browser custom track) |
| Alignm length: | 418 |
| Alignm identity: | 292 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 45, 10 |
| Conread position: | 12-196 |
| Cow position: | chr17:16463336-16463151 (view UCSC Genome Browser custom track) |
| Alignm length: | 187 |
| Alignm identity: | 139 |
| Alignm E-value: | 2e-31 |
| Alignm gaps (pig, cow): | 151, 65 |
| Conread position: | 12-248 |
| Cow position: | chr17:8861403-8861173 (view UCSC Genome Browser custom track) |
| Alignm length: | 238 |
| Alignm identity: | 169 |
| Alignm E-value: | 6e-32 |
| Alignm gaps (pig, cow): | 196, 35 |
| Conread position: | 13-352 |
| Cow position: | chr17:18494736-18494405 (view UCSC Genome Browser custom track) |
| Alignm length: | 343 |
| Alignm identity: | 232 |
| Alignm E-value: | 3e-37 |
| Alignm gaps (pig, cow): | 70, 53 |
| Conread position: | 14-244 |
| Cow position: | chr17:19756121-19755895 (view UCSC Genome Browser custom track) |
| Alignm length: | 234 |
| Alignm identity: | 169 |
| Alignm E-value: | 6e-32 |
| Alignm gaps (pig, cow): | 8, 41 |
| Conread position: | 15-244 |
| Cow position: | chr17:18245856-18246083 (view UCSC Genome Browser custom track) |
| Alignm length: | 231 |
| Alignm identity: | 169 |
| Alignm E-value: | 1e-38 |
| Alignm gaps (pig, cow): | 197, 95 |
| Conread position: | 18-214 |
| Cow position: | chr17:144388-144203 (view UCSC Genome Browser custom track) |
| Alignm length: | 198 |
| Alignm identity: | 149 |
| Alignm E-value: | 4e-29 |
| Alignm gaps (pig, cow): | 194, 22 |
| Conread position: | 18-244 |
| Cow position: | chr17:25740734-25740958 (view UCSC Genome Browser custom track) |
| Alignm length: | 228 |
| Alignm identity: | 172 |
| Alignm E-value: | 1.99965e-42 |
| Alignm gaps (pig, cow): | 195, 86 |
| Conread position: | 18-248 |
| Cow position: | chr17:16307164-16307388 (view UCSC Genome Browser custom track) |
| Alignm length: | 232 |
| Alignm identity: | 166 |
| Alignm E-value: | 6e-33 |
| Alignm gaps (pig, cow): | 194, 99 |
| Conread position: | 18-248 |
| Cow position: | chr17:25590452-25590225 (view UCSC Genome Browser custom track) |
| Alignm length: | 233 |
| Alignm identity: | 175 |
| Alignm E-value: | 4.99997e-41 |
| Alignm gaps (pig, cow): | 35, 22 |
| Conread position: | 18-249 |
| Cow position: | chr17:17452818-17452595 (view UCSC Genome Browser custom track) |
| Alignm length: | 232 |
| Alignm identity: | 173 |
| Alignm E-value: | 4e-39 |
| Alignm gaps (pig, cow): | 47, 0 |
| Conread position: | 18-410 |
| Cow position: | chr17:11655210-11655589 (view UCSC Genome Browser custom track) |
| Alignm length: | 398 |
| Alignm identity: | 275 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 112, 69 |
| Conread position: | 19-222 |
| Cow position: | chr17:27978956-27979150 (view UCSC Genome Browser custom track) |
| Alignm length: | 204 |
| Alignm identity: | 146 |
| Alignm E-value: | 3e-27 |
| Alignm gaps (pig, cow): | 57, 0 |
| Conread position: | 19-358 |
| Cow position: | chr17:20815158-20815499 (view UCSC Genome Browser custom track) |
| Alignm length: | 353 |
| Alignm identity: | 251 |
| Alignm E-value: | 5.99756e-43 |
| Alignm gaps (pig, cow): | 27, 103 |
| Conread position: | 20-248 |
| Cow position: | chr17:23880042-23879818 (view UCSC Genome Browser custom track) |
| Alignm length: | 231 |
| Alignm identity: | 171 |
| Alignm E-value: | 1e-36 |
| Alignm gaps (pig, cow): | 79, 171 |
| Conread position: | 20-249 |
| Cow position: | chr17:37415114-37414885 (view UCSC Genome Browser custom track) |
| Alignm length: | 231 |
| Alignm identity: | 176 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 192, 142 |
| Conread position: | 20-249 |
| Cow position: | chr17:38276478-38276698 (view UCSC Genome Browser custom track) |
| Alignm length: | 232 |
| Alignm identity: | 167 |
| Alignm E-value: | 5e-30 |
| Alignm gaps (pig, cow): | 192, 20 |
| Conread position: | 22-248 |
| Cow position: | chr17:34628693-34628470 (view UCSC Genome Browser custom track) |
| Alignm length: | 230 |
| Alignm identity: | 173 |
| Alignm E-value: | 4e-39 |
| Alignm gaps (pig, cow): | 79, 75 |
| Conread position: | 22-433 |
| Cow position: | chr17:30236016-30236423 (view UCSC Genome Browser custom track) |
| Alignm length: | 431 |
| Alignm identity: | 294 |
| Alignm E-value: | 7e-34 |
| Alignm gaps (pig, cow): | 110, 12 |
| Conread position: | 23-279 |
| Cow position: | chr17:27780644-27780891 (view UCSC Genome Browser custom track) |
| Alignm length: | 260 |
| Alignm identity: | 186 |
| Alignm E-value: | 6e-32 |
| Alignm gaps (pig, cow): | 179, 17 |
| Conread position: | 68-247 |
| Cow position: | chr17:13672235-13672062 (view UCSC Genome Browser custom track) |
| Alignm length: | 181 |
| Alignm identity: | 135 |
| Alignm E-value: | 1e-26 |
| Alignm gaps (pig, cow): | 144, 15 |
| Conread position: | 71-245 |
| Cow position: | chr17:28359680-28359846 (view UCSC Genome Browser custom track) |
| Alignm length: | 175 |
| Alignm identity: | 138 |
| Alignm E-value: | 2e-33 |
| Alignm gaps (pig, cow): | 33, 0 |
| Conread position: | 100-196 |
| Cow position: | chr17:1094654-1094559 (view UCSC Genome Browser custom track) |
| Alignm length: | 99 |
| Alignm identity: | 86 |
| Alignm E-value: | 5e-21 |
| Alignm gaps (pig, cow): | 8, 13 |
| Conread position: | 115-263 |
| Cow position: | chr17:7861964-7861808 (view UCSC Genome Browser custom track) |
| Alignm length: | 158 |
| Alignm identity: | 124 |
| Alignm E-value: | 3e-26 |
| Alignm gaps (pig, cow): | 77, 48 |
| Conread position: | 117-249 |
| Cow position: | chr17:26162547-26162416 (view UCSC Genome Browser custom track) |
| Alignm length: | 134 |
| Alignm identity: | 102 |
| Alignm E-value: | 2e-21 |
| Alignm gaps (pig, cow): | 95, 32 |
| Conread position: | 252-387 |
| Cow position: | chr17:37043360-37043231 (view UCSC Genome Browser custom track) |
| Alignm length: | 136 |
| Alignm identity: | 106 |
| Alignm E-value: | 7e-23 |
| Alignm gaps (pig, cow): | 35, 0 |
| Conread position: | 260-387 |
| Cow position: | chr17:8093910-8094033 (view UCSC Genome Browser custom track) |
| Alignm length: | 128 |
| Alignm identity: | 100 |
| Alignm E-value: | 6e-22 |
| Alignm gaps (pig, cow): | 27, 0 |
| Conread position: | 260-436 |
| Cow position: | chr17:27819358-27819530 (view UCSC Genome Browser custom track) |
| Alignm length: | 178 |
| Alignm identity: | 127 |
| Alignm E-value: | 2e-21 |
| Alignm gaps (pig, cow): | 56, 21 |
| Conread position: | 260-439 |
| Cow position: | chr17:38139572-38139751 (view UCSC Genome Browser custom track) |
| Alignm length: | 185 |
| Alignm identity: | 137 |
| Alignm E-value: | 8e-25 |
| Alignm gaps (pig, cow): | 135, 23 |
| Conread position: | 262-387 |
| Cow position: | chr17:23879461-23879339 (view UCSC Genome Browser custom track) |
| Alignm length: | 126 |
| Alignm identity: | 102 |
| Alignm E-value: | 9e-26 |
| Alignm gaps (pig, cow): | 25, 0 |
| Conread position: | 263-387 |
| Cow position: | chr17:7595216-7595337 (view UCSC Genome Browser custom track) |
| Alignm length: | 125 |
| Alignm identity: | 105 |
| Alignm E-value: | 4e-29 |
| Alignm gaps (pig, cow): | 20, 0 |
| Conread position: | 263-387 |
| Cow position: | chr17:27781132-27781253 (view UCSC Genome Browser custom track) |
| Alignm length: | 125 |
| Alignm identity: | 101 |
| Alignm E-value: | 3e-25 |
| Alignm gaps (pig, cow): | 24, 0 |
| Conread position: | 263-398 |
| Cow position: | chr17:11826391-11826260 (view UCSC Genome Browser custom track) |
| Alignm length: | 136 |
| Alignm identity: | 107 |
| Alignm E-value: | 2e-24 |
| Alignm gaps (pig, cow): | 16, 0 |
| Conread position: | 263-410 |
| Cow position: | chr17:32457503-32457360 (view UCSC Genome Browser custom track) |
| Alignm length: | 148 |
| Alignm identity: | 114 |
| Alignm E-value: | 9e-26 |
| Alignm gaps (pig, cow): | 20, 0 |
Show alignments to all cow chromosomes.