Cow genome map
| Conread name: | Pig4-TMW8003J24 |
| Conread position: | 1-244 |
| Cow position: | chr19:2821292-2821535 (view UCSC Genome Browser custom track) |
| Alignm length: | 247 |
| Alignm identity: | 183 |
| Alignm E-value: | 6.99949e-42 |
| Alignm gaps (pig, cow): | 10, 41 |
| Conread position: | 1-248 |
| Cow position: | chr19:39876802-39876560 (view UCSC Genome Browser custom track) |
| Alignm length: | 253 |
| Alignm identity: | 171 |
| Alignm E-value: | 2e-21 |
| Alignm gaps (pig, cow): | 15, 99 |
| Conread position: | 1-254 |
| Cow position: | chr19:20693212-20693460 (view UCSC Genome Browser custom track) |
| Alignm length: | 257 |
| Alignm identity: | 174 |
| Alignm E-value: | 3e-25 |
| Alignm gaps (pig, cow): | 22, 40 |
| Conread position: | 1-254 |
| Cow position: | chr19:55236206-55236453 (view UCSC Genome Browser custom track) |
| Alignm length: | 257 |
| Alignm identity: | 187 |
| Alignm E-value: | 4e-37 |
| Alignm gaps (pig, cow): | 19, 110 |
| Conread position: | 1-259 |
| Cow position: | chr19:53738048-53738303 (view UCSC Genome Browser custom track) |
| Alignm length: | 262 |
| Alignm identity: | 190 |
| Alignm E-value: | 2e-40 |
| Alignm gaps (pig, cow): | 14, 109 |
| Conread position: | 9-248 |
| Cow position: | chr19:19673142-19673371 (view UCSC Genome Browser custom track) |
| Alignm length: | 242 |
| Alignm identity: | 183 |
| Alignm E-value: | 5e-40 |
| Alignm gaps (pig, cow): | 203, 31 |
| Conread position: | 12-245 |
| Cow position: | chr19:36977186-36976959 (view UCSC Genome Browser custom track) |
| Alignm length: | 235 |
| Alignm identity: | 177 |
| Alignm E-value: | 1.99993e-41 |
| Alignm gaps (pig, cow): | 199, 19 |
| Conread position: | 18-239 |
| Cow position: | chr19:9704098-9703888 (view UCSC Genome Browser custom track) |
| Alignm length: | 223 |
| Alignm identity: | 161 |
| Alignm E-value: | 5e-29 |
| Alignm gaps (pig, cow): | 193, 81 |
| Conread position: | 18-248 |
| Cow position: | chr19:31826842-31827055 (view UCSC Genome Browser custom track) |
| Alignm length: | 232 |
| Alignm identity: | 171 |
| Alignm E-value: | 6e-31 |
| Alignm gaps (pig, cow): | 194, 22 |
| Conread position: | 18-385 |
| Cow position: | chr19:33281103-33281464 (view UCSC Genome Browser custom track) |
| Alignm length: | 377 |
| Alignm identity: | 266 |
| Alignm E-value: | 2.8026e-45 |
| Alignm gaps (pig, cow): | 190, 22 |
| Conread position: | 20-248 |
| Cow position: | chr19:35782398-35782174 (view UCSC Genome Browser custom track) |
| Alignm length: | 230 |
| Alignm identity: | 179 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 192, 20 |
| Conread position: | 20-265 |
| Cow position: | chr19:19924862-19924624 (view UCSC Genome Browser custom track) |
| Alignm length: | 248 |
| Alignm identity: | 185 |
| Alignm E-value: | 6.99949e-42 |
| Alignm gaps (pig, cow): | 192, 34 |
| Conread position: | 22-248 |
| Cow position: | chr19:48478705-48478936 (view UCSC Genome Browser custom track) |
| Alignm length: | 233 |
| Alignm identity: | 166 |
| Alignm E-value: | 8e-33 |
| Alignm gaps (pig, cow): | 33, 146 |
| Conread position: | 22-374 |
| Cow position: | chr19:42215847-42216192 (view UCSC Genome Browser custom track) |
| Alignm length: | 361 |
| Alignm identity: | 236 |
| Alignm E-value: | 1e-26 |
| Alignm gaps (pig, cow): | 180, 73 |
| Conread position: | 28-246 |
| Cow position: | chr19:22863920-22863706 (view UCSC Genome Browser custom track) |
| Alignm length: | 219 |
| Alignm identity: | 162 |
| Alignm E-value: | 1e-37 |
| Alignm gaps (pig, cow): | 135, 0 |
| Conread position: | 30-244 |
| Cow position: | chr19:31381252-31381041 (view UCSC Genome Browser custom track) |
| Alignm length: | 215 |
| Alignm identity: | 161 |
| Alignm E-value: | 5e-39 |
| Alignm gaps (pig, cow): | 10, 0 |
| Conread position: | 32-259 |
| Cow position: | chr19:6881132-6880906 (view UCSC Genome Browser custom track) |
| Alignm length: | 231 |
| Alignm identity: | 172 |
| Alignm E-value: | 1e-38 |
| Alignm gaps (pig, cow): | 28, 21 |
| Conread position: | 42-249 |
| Cow position: | chr19:44489848-44490054 (view UCSC Genome Browser custom track) |
| Alignm length: | 209 |
| Alignm identity: | 161 |
| Alignm E-value: | 6.99949e-42 |
| Alignm gaps (pig, cow): | 170, 38 |
| Conread position: | 44-245 |
| Cow position: | chr19:1713385-1713189 (view UCSC Genome Browser custom track) |
| Alignm length: | 203 |
| Alignm identity: | 152 |
| Alignm E-value: | 3e-33 |
| Alignm gaps (pig, cow): | 168, 79 |
| Conread position: | 46-248 |
| Cow position: | chr19:28921584-28921781 (view UCSC Genome Browser custom track) |
| Alignm length: | 204 |
| Alignm identity: | 147 |
| Alignm E-value: | 2e-28 |
| Alignm gaps (pig, cow): | 166, 15 |
| Conread position: | 58-257 |
| Cow position: | chr19:39986770-39986578 (view UCSC Genome Browser custom track) |
| Alignm length: | 202 |
| Alignm identity: | 144 |
| Alignm E-value: | 9e-24 |
| Alignm gaps (pig, cow): | 154, 38 |
| Conread position: | 59-245 |
| Cow position: | chr19:47479852-47479664 (view UCSC Genome Browser custom track) |
| Alignm length: | 193 |
| Alignm identity: | 140 |
| Alignm E-value: | 3e-25 |
| Alignm gaps (pig, cow): | 40, 47 |
| Conread position: | 66-196 |
| Cow position: | chr19:11147742-11147614 (view UCSC Genome Browser custom track) |
| Alignm length: | 131 |
| Alignm identity: | 102 |
| Alignm E-value: | 9e-24 |
| Alignm gaps (pig, cow): | 25, 0 |
| Conread position: | 103-249 |
| Cow position: | chr19:15936655-15936795 (view UCSC Genome Browser custom track) |
| Alignm length: | 147 |
| Alignm identity: | 111 |
| Alignm E-value: | 2e-22 |
| Alignm gaps (pig, cow): | 60, 0 |
| Conread position: | 113-245 |
| Cow position: | chr19:25271593-25271461 (view UCSC Genome Browser custom track) |
| Alignm length: | 134 |
| Alignm identity: | 102 |
| Alignm E-value: | 2e-22 |
| Alignm gaps (pig, cow): | 99, 50 |
| Conread position: | 114-256 |
| Cow position: | chr19:1402983-1402842 (view UCSC Genome Browser custom track) |
| Alignm length: | 147 |
| Alignm identity: | 113 |
| Alignm E-value: | 7e-22 |
| Alignm gaps (pig, cow): | 98, 23 |
| Conread position: | 116-248 |
| Cow position: | chr19:51536393-51536525 (view UCSC Genome Browser custom track) |
| Alignm length: | 134 |
| Alignm identity: | 102 |
| Alignm E-value: | 2e-22 |
| Alignm gaps (pig, cow): | 96, 76 |
| Conread position: | 129-244 |
| Cow position: | chr19:5279704-5279822 (view UCSC Genome Browser custom track) |
| Alignm length: | 119 |
| Alignm identity: | 94 |
| Alignm E-value: | 7e-21 |
| Alignm gaps (pig, cow): | 23, 0 |
| Conread position: | 242-410 |
| Cow position: | chr19:12040611-12040778 (view UCSC Genome Browser custom track) |
| Alignm length: | 172 |
| Alignm identity: | 127 |
| Alignm E-value: | 3e-24 |
| Alignm gaps (pig, cow): | 65, 41 |
| Conread position: | 249-386 |
| Cow position: | chr19:31126798-31126932 (view UCSC Genome Browser custom track) |
| Alignm length: | 138 |
| Alignm identity: | 104 |
| Alignm E-value: | 7e-22 |
| Alignm gaps (pig, cow): | 31, 0 |
| Conread position: | 251-393 |
| Cow position: | chr19:30935768-30935634 (view UCSC Genome Browser custom track) |
| Alignm length: | 143 |
| Alignm identity: | 111 |
| Alignm E-value: | 2e-22 |
| Alignm gaps (pig, cow): | 30, 0 |
| Conread position: | 257-375 |
| Cow position: | chr19:46306329-46306214 (view UCSC Genome Browser custom track) |
| Alignm length: | 119 |
| Alignm identity: | 95 |
| Alignm E-value: | 2e-22 |
| Alignm gaps (pig, cow): | 26, 0 |
| Conread position: | 257-392 |
| Cow position: | chr19:6735219-6735085 (view UCSC Genome Browser custom track) |
| Alignm length: | 136 |
| Alignm identity: | 101 |
| Alignm E-value: | 2e-21 |
| Alignm gaps (pig, cow): | 36, 0 |
| Conread position: | 257-393 |
| Cow position: | chr19:5986243-5986376 (view UCSC Genome Browser custom track) |
| Alignm length: | 138 |
| Alignm identity: | 105 |
| Alignm E-value: | 7e-21 |
| Alignm gaps (pig, cow): | 51, 26 |
| Conread position: | 257-406 |
| Cow position: | chr19:36461520-36461373 (view UCSC Genome Browser custom track) |
| Alignm length: | 152 |
| Alignm identity: | 114 |
| Alignm E-value: | 7e-22 |
| Alignm gaps (pig, cow): | 87, 26 |
| Conread position: | 258-410 |
| Cow position: | chr19:2771007-2770858 (view UCSC Genome Browser custom track) |
| Alignm length: | 154 |
| Alignm identity: | 115 |
| Alignm E-value: | 3e-23 |
| Alignm gaps (pig, cow): | 142, 33 |
| Conread position: | 263-384 |
| Cow position: | chr19:15936848-15936965 (view UCSC Genome Browser custom track) |
| Alignm length: | 122 |
| Alignm identity: | 96 |
| Alignm E-value: | 7e-21 |
| Alignm gaps (pig, cow): | 24, 0 |
| Conread position: | 263-386 |
| Cow position: | chr19:55236500-55236620 (view UCSC Genome Browser custom track) |
| Alignm length: | 124 |
| Alignm identity: | 96 |
| Alignm E-value: | 7e-21 |
| Alignm gaps (pig, cow): | 20, 0 |
| Conread position: | 263-406 |
| Cow position: | chr19:21285067-21284925 (view UCSC Genome Browser custom track) |
| Alignm length: | 147 |
| Alignm identity: | 114 |
| Alignm E-value: | 3e-23 |
| Alignm gaps (pig, cow): | 60, 20 |
| Conread position: | 263-410 |
| Cow position: | chr19:25271404-25271259 (view UCSC Genome Browser custom track) |
| Alignm length: | 150 |
| Alignm identity: | 118 |
| Alignm E-value: | 1e-26 |
| Alignm gaps (pig, cow): | 137, 24 |
| Conread position: | 263-434 |
| Cow position: | chr19:11147607-11147439 (view UCSC Genome Browser custom track) |
| Alignm length: | 176 |
| Alignm identity: | 129 |
| Alignm E-value: | 7e-22 |
| Alignm gaps (pig, cow): | 126, 20 |
| Conread position: | 265-392 |
| Cow position: | chr19:2280627-2280504 (view UCSC Genome Browser custom track) |
| Alignm length: | 128 |
| Alignm identity: | 101 |
| Alignm E-value: | 2e-22 |
| Alignm gaps (pig, cow): | 26, 0 |
| Conread position: | 293-409 |
| Cow position: | chr19:18704510-18704624 (view UCSC Genome Browser custom track) |
| Alignm length: | 118 |
| Alignm identity: | 95 |
| Alignm E-value: | 2e-21 |
| Alignm gaps (pig, cow): | 108, 67 |
Show alignments to all cow chromosomes.