Cow genome map
| Conread name: | Pig4-TMW8003J24 |
| Conread position: | 1-248 |
| Cow position: | chr21:28998119-28997868 (view UCSC Genome Browser custom track) |
| Alignm length: | 252 |
| Alignm identity: | 187 |
| Alignm E-value: | 1.4013e-45 |
| Alignm gaps (pig, cow): | 15, 0 |
| Conread position: | 12-235 |
| Cow position: | chr21:8289840-8289617 (view UCSC Genome Browser custom track) |
| Alignm length: | 225 |
| Alignm identity: | 175 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 200, 151 |
| Conread position: | 12-241 |
| Cow position: | chr21:35996974-35997199 (view UCSC Genome Browser custom track) |
| Alignm length: | 232 |
| Alignm identity: | 174 |
| Alignm E-value: | 5e-40 |
| Alignm gaps (pig, cow): | 34, 8 |
| Conread position: | 14-199 |
| Cow position: | chr21:24714456-24714635 (view UCSC Genome Browser custom track) |
| Alignm length: | 186 |
| Alignm identity: | 147 |
| Alignm E-value: | 1e-37 |
| Alignm gaps (pig, cow): | 35, 0 |
| Conread position: | 18-246 |
| Cow position: | chr21:33947437-33947222 (view UCSC Genome Browser custom track) |
| Alignm length: | 230 |
| Alignm identity: | 159 |
| Alignm E-value: | 6e-21 |
| Alignm gaps (pig, cow): | 130, 22 |
| Conread position: | 18-262 |
| Cow position: | chr21:30150462-30150218 (view UCSC Genome Browser custom track) |
| Alignm length: | 250 |
| Alignm identity: | 190 |
| Alignm E-value: | 1.4013e-45 |
| Alignm gaps (pig, cow): | 28, 108 |
| Conread position: | 19-259 |
| Cow position: | chr21:42053457-42053218 (view UCSC Genome Browser custom track) |
| Alignm length: | 247 |
| Alignm identity: | 191 |
| Alignm E-value: | 2.8026e-45 |
| Alignm gaps (pig, cow): | 193, 91 |
| Conread position: | 22-250 |
| Cow position: | chr21:44093590-44093817 (view UCSC Genome Browser custom track) |
| Alignm length: | 233 |
| Alignm identity: | 173 |
| Alignm E-value: | 3e-36 |
| Alignm gaps (pig, cow): | 37, 80 |
| Conread position: | 22-284 |
| Cow position: | chr21:35061899-35062149 (view UCSC Genome Browser custom track) |
| Alignm length: | 263 |
| Alignm identity: | 187 |
| Alignm E-value: | 3e-35 |
| Alignm gaps (pig, cow): | 141, 0 |
| Conread position: | 26-410 |
| Cow position: | chr21:24674566-24674950 (view UCSC Genome Browser custom track) |
| Alignm length: | 395 |
| Alignm identity: | 258 |
| Alignm E-value: | 2e-32 |
| Alignm gaps (pig, cow): | 11, 56 |
| Conread position: | 69-247 |
| Cow position: | chr21:41583127-41583302 (view UCSC Genome Browser custom track) |
| Alignm length: | 181 |
| Alignm identity: | 130 |
| Alignm E-value: | 7e-23 |
| Alignm gaps (pig, cow): | 33, 58 |
| Conread position: | 80-210 |
| Cow position: | chr21:40312933-40312801 (view UCSC Genome Browser custom track) |
| Alignm length: | 134 |
| Alignm identity: | 108 |
| Alignm E-value: | 3e-26 |
| Alignm gaps (pig, cow): | 74, 84 |
| Conread position: | 89-410 |
| Cow position: | chr21:6621446-6621121 (view UCSC Genome Browser custom track) |
| Alignm length: | 333 |
| Alignm identity: | 220 |
| Alignm E-value: | 3e-26 |
| Alignm gaps (pig, cow): | 123, 99 |
| Conread position: | 91-240 |
| Cow position: | chr21:41595590-41595739 (view UCSC Genome Browser custom track) |
| Alignm length: | 152 |
| Alignm identity: | 118 |
| Alignm E-value: | 4e-27 |
| Alignm gaps (pig, cow): | 121, 72 |
| Conread position: | 91-248 |
| Cow position: | chr21:45923768-45923614 (view UCSC Genome Browser custom track) |
| Alignm length: | 159 |
| Alignm identity: | 118 |
| Alignm E-value: | 2e-23 |
| Alignm gaps (pig, cow): | 121, 72 |
| Conread position: | 114-245 |
| Cow position: | chr21:41514703-41514834 (view UCSC Genome Browser custom track) |
| Alignm length: | 134 |
| Alignm identity: | 103 |
| Alignm E-value: | 2e-21 |
| Alignm gaps (pig, cow): | 98, 47 |
| Conread position: | 260-406 |
| Cow position: | chr21:37121126-37120982 (view UCSC Genome Browser custom track) |
| Alignm length: | 149 |
| Alignm identity: | 114 |
| Alignm E-value: | 2e-23 |
| Alignm gaps (pig, cow): | 7, 30 |
| Conread position: | 263-383 |
| Cow position: | chr21:13256423-13256307 (view UCSC Genome Browser custom track) |
| Alignm length: | 121 |
| Alignm identity: | 95 |
| Alignm E-value: | 6e-21 |
| Alignm gaps (pig, cow): | 28, 0 |
| Conread position: | 263-398 |
| Cow position: | chr21:35997261-35997392 (view UCSC Genome Browser custom track) |
| Alignm length: | 136 |
| Alignm identity: | 106 |
| Alignm E-value: | 8e-24 |
| Alignm gaps (pig, cow): | 24, 0 |
| Conread position: | 263-410 |
| Cow position: | chr21:11675964-11675819 (view UCSC Genome Browser custom track) |
| Alignm length: | 149 |
| Alignm identity: | 110 |
| Alignm E-value: | 7e-22 |
| Alignm gaps (pig, cow): | 122, 25 |
| Conread position: | 263-410 |
| Cow position: | chr21:17807048-17806905 (view UCSC Genome Browser custom track) |
| Alignm length: | 148 |
| Alignm identity: | 113 |
| Alignm E-value: | 9e-25 |
| Alignm gaps (pig, cow): | 20, 0 |
| Conread position: | 263-410 |
| Cow position: | chr21:30053332-30053186 (view UCSC Genome Browser custom track) |
| Alignm length: | 150 |
| Alignm identity: | 114 |
| Alignm E-value: | 2e-23 |
| Alignm gaps (pig, cow): | 137, 24 |
| Conread position: | 263-410 |
| Cow position: | chr21:31576581-31576722 (view UCSC Genome Browser custom track) |
| Alignm length: | 148 |
| Alignm identity: | 115 |
| Alignm E-value: | 1e-25 |
| Alignm gaps (pig, cow): | 28, 0 |
| Conread position: | 263-411 |
| Cow position: | chr21:15239368-15239512 (view UCSC Genome Browser custom track) |
| Alignm length: | 149 |
| Alignm identity: | 110 |
| Alignm E-value: | 2e-21 |
| Alignm gaps (pig, cow): | 20, 0 |
| Conread position: | 263-411 |
| Cow position: | chr21:33947164-33947020 (view UCSC Genome Browser custom track) |
| Alignm length: | 149 |
| Alignm identity: | 111 |
| Alignm E-value: | 7e-23 |
| Alignm gaps (pig, cow): | 28, 0 |
| Conread position: | 267-410 |
| Cow position: | chr21:27480537-27480678 (view UCSC Genome Browser custom track) |
| Alignm length: | 146 |
| Alignm identity: | 112 |
| Alignm E-value: | 7e-23 |
| Alignm gaps (pig, cow): | 65, 13 |
Show alignments to all cow chromosomes.