Cow genome map
| Conread name: | Pig4-TMW8003J24 |
| Conread position: | 1-146 |
| Cow position: | chr24:43506813-43506669 (view UCSC Genome Browser custom track) |
| Alignm length: | 146 |
| Alignm identity: | 106 |
| Alignm E-value: | 2e-21 |
| Alignm gaps (pig, cow): | 121, 0 |
| Conread position: | 1-248 |
| Cow position: | chr24:37205176-37204934 (view UCSC Genome Browser custom track) |
| Alignm length: | 249 |
| Alignm identity: | 189 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 207, 25 |
| Conread position: | 3-260 |
| Cow position: | chr24:39500581-39500324 (view UCSC Genome Browser custom track) |
| Alignm length: | 263 |
| Alignm identity: | 196 |
| Alignm E-value: | 7.00649e-44 |
| Alignm gaps (pig, cow): | 17, 111 |
| Conread position: | 11-199 |
| Cow position: | chr24:8591050-8591235 (view UCSC Genome Browser custom track) |
| Alignm length: | 190 |
| Alignm identity: | 148 |
| Alignm E-value: | 3e-37 |
| Alignm gaps (pig, cow): | 142, 29 |
| Conread position: | 12-244 |
| Cow position: | chr24:38266906-38267130 (view UCSC Genome Browser custom track) |
| Alignm length: | 235 |
| Alignm identity: | 163 |
| Alignm E-value: | 1e-26 |
| Alignm gaps (pig, cow): | 193, 123 |
| Conread position: | 12-375 |
| Cow position: | chr24:39123582-39123951 (view UCSC Genome Browser custom track) |
| Alignm length: | 387 |
| Alignm identity: | 273 |
| Alignm E-value: | 1e-39 |
| Alignm gaps (pig, cow): | 84, 57 |
| Conread position: | 12-410 |
| Cow position: | chr24:28279357-28279769 (view UCSC Genome Browser custom track) |
| Alignm length: | 424 |
| Alignm identity: | 306 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 194, 34 |
| Conread position: | 13-245 |
| Cow position: | chr24:43733683-43733912 (view UCSC Genome Browser custom track) |
| Alignm length: | 235 |
| Alignm identity: | 175 |
| Alignm E-value: | 9.99995e-41 |
| Alignm gaps (pig, cow): | 132, 97 |
| Conread position: | 14-243 |
| Cow position: | chr24:14337449-14337670 (view UCSC Genome Browser custom track) |
| Alignm length: | 231 |
| Alignm identity: | 168 |
| Alignm E-value: | 2e-33 |
| Alignm gaps (pig, cow): | 14, 27 |
| Conread position: | 18-202 |
| Cow position: | chr24:6508044-6507867 (view UCSC Genome Browser custom track) |
| Alignm length: | 185 |
| Alignm identity: | 145 |
| Alignm E-value: | 3e-36 |
| Alignm gaps (pig, cow): | 22, 0 |
| Conread position: | 18-342 |
| Cow position: | chr24:27683723-27683379 (view UCSC Genome Browser custom track) |
| Alignm length: | 349 |
| Alignm identity: | 257 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 122, 143 |
| Conread position: | 20-266 |
| Cow position: | chr24:32759049-32758796 (view UCSC Genome Browser custom track) |
| Alignm length: | 255 |
| Alignm identity: | 184 |
| Alignm E-value: | 4e-38 |
| Alignm gaps (pig, cow): | 34, 149 |
| Conread position: | 22-244 |
| Cow position: | chr24:30860360-30860577 (view UCSC Genome Browser custom track) |
| Alignm length: | 224 |
| Alignm identity: | 164 |
| Alignm E-value: | 3e-35 |
| Alignm gaps (pig, cow): | 190, 26 |
| Conread position: | 31-265 |
| Cow position: | chr24:40091839-40091614 (view UCSC Genome Browser custom track) |
| Alignm length: | 236 |
| Alignm identity: | 170 |
| Alignm E-value: | 2e-32 |
| Alignm gaps (pig, cow): | 181, 9 |
| Conread position: | 44-198 |
| Cow position: | chr24:30427886-30428035 (view UCSC Genome Browser custom track) |
| Alignm length: | 155 |
| Alignm identity: | 124 |
| Alignm E-value: | 5e-31 |
| Alignm gaps (pig, cow): | 32, 0 |
| Conread position: | 58-245 |
| Cow position: | chr24:6061640-6061457 (view UCSC Genome Browser custom track) |
| Alignm length: | 190 |
| Alignm identity: | 146 |
| Alignm E-value: | 2e-33 |
| Alignm gaps (pig, cow): | 154, 59 |
| Conread position: | 89-248 |
| Cow position: | chr24:29041825-29041976 (view UCSC Genome Browser custom track) |
| Alignm length: | 160 |
| Alignm identity: | 119 |
| Alignm E-value: | 2e-21 |
| Alignm gaps (pig, cow): | 21, 0 |
| Conread position: | 103-245 |
| Cow position: | chr24:31258533-31258395 (view UCSC Genome Browser custom track) |
| Alignm length: | 144 |
| Alignm identity: | 109 |
| Alignm E-value: | 5e-21 |
| Alignm gaps (pig, cow): | 109, 9 |
| Conread position: | 111-356 |
| Cow position: | chr24:30940634-30940384 (view UCSC Genome Browser custom track) |
| Alignm length: | 256 |
| Alignm identity: | 179 |
| Alignm E-value: | 4e-29 |
| Alignm gaps (pig, cow): | 100, 52 |
| Conread position: | 116-248 |
| Cow position: | chr24:29691482-29691346 (view UCSC Genome Browser custom track) |
| Alignm length: | 137 |
| Alignm identity: | 108 |
| Alignm E-value: | 3e-25 |
| Alignm gaps (pig, cow): | 53, 0 |
| Conread position: | 116-435 |
| Cow position: | chr24:44929212-44929516 (view UCSC Genome Browser custom track) |
| Alignm length: | 322 |
| Alignm identity: | 211 |
| Alignm E-value: | 8e-25 |
| Alignm gaps (pig, cow): | 96, 32 |
| Conread position: | 261-442 |
| Cow position: | chr24:42943120-42942943 (view UCSC Genome Browser custom track) |
| Alignm length: | 184 |
| Alignm identity: | 134 |
| Alignm E-value: | 7e-24 |
| Alignm gaps (pig, cow): | 56, 22 |
| Conread position: | 262-389 |
| Cow position: | chr24:11201647-11201523 (view UCSC Genome Browser custom track) |
| Alignm length: | 128 |
| Alignm identity: | 100 |
| Alignm E-value: | 7e-23 |
| Alignm gaps (pig, cow): | 21, 0 |
| Conread position: | 263-392 |
| Cow position: | chr24:19754574-19754700 (view UCSC Genome Browser custom track) |
| Alignm length: | 131 |
| Alignm identity: | 103 |
| Alignm E-value: | 2e-22 |
| Alignm gaps (pig, cow): | 124, 20 |
| Conread position: | 263-398 |
| Cow position: | chr24:6507769-6507638 (view UCSC Genome Browser custom track) |
| Alignm length: | 136 |
| Alignm identity: | 104 |
| Alignm E-value: | 6e-22 |
| Alignm gaps (pig, cow): | 20, 0 |
| Conread position: | 263-398 |
| Cow position: | chr24:41332582-41332451 (view UCSC Genome Browser custom track) |
| Alignm length: | 136 |
| Alignm identity: | 109 |
| Alignm E-value: | 1e-26 |
| Alignm gaps (pig, cow): | 20, 0 |
| Conread position: | 263-404 |
| Cow position: | chr24:5849375-5849236 (view UCSC Genome Browser custom track) |
| Alignm length: | 143 |
| Alignm identity: | 107 |
| Alignm E-value: | 2e-21 |
| Alignm gaps (pig, cow): | 126, 20 |
| Conread position: | 263-409 |
| Cow position: | chr24:40809364-40809222 (view UCSC Genome Browser custom track) |
| Alignm length: | 149 |
| Alignm identity: | 114 |
| Alignm E-value: | 6e-22 |
| Alignm gaps (pig, cow): | 137, 20 |
| Conread position: | 265-405 |
| Cow position: | chr24:36497732-36497595 (view UCSC Genome Browser custom track) |
| Alignm length: | 143 |
| Alignm identity: | 112 |
| Alignm E-value: | 2e-23 |
| Alignm gaps (pig, cow): | 135, 23 |
| Conread position: | 268-410 |
| Cow position: | chr24:32158270-32158129 (view UCSC Genome Browser custom track) |
| Alignm length: | 146 |
| Alignm identity: | 113 |
| Alignm E-value: | 7e-23 |
| Alignm gaps (pig, cow): | 59, 15 |
Show alignments to all cow chromosomes.