Cow genome map
| Conread name: | Pig4-TMW8003J24 |
| Conread position: | 1-97 |
| Cow position: | chr4:22906757-22906853 (view UCSC Genome Browser custom track) |
| Alignm length: | 97 |
| Alignm identity: | 80 |
| Alignm E-value: | 8e-21 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 1-202 |
| Cow position: | chr4:22051750-22051553 (view UCSC Genome Browser custom track) |
| Alignm length: | 204 |
| Alignm identity: | 148 |
| Alignm E-value: | 2e-28 |
| Alignm gaps (pig, cow): | 160, 77 |
| Conread position: | 1-202 |
| Cow position: | chr4:65406643-65406442 (view UCSC Genome Browser custom track) |
| Alignm length: | 205 |
| Alignm identity: | 154 |
| Alignm E-value: | 1e-34 |
| Alignm gaps (pig, cow): | 19, 50 |
| Conread position: | 1-248 |
| Cow position: | chr4:19306973-19307221 (view UCSC Genome Browser custom track) |
| Alignm length: | 252 |
| Alignm identity: | 196 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 19, 41 |
| Conread position: | 3-206 |
| Cow position: | chr4:23382086-23381886 (view UCSC Genome Browser custom track) |
| Alignm length: | 205 |
| Alignm identity: | 152 |
| Alignm E-value: | 1e-34 |
| Alignm gaps (pig, cow): | 20, 97 |
| Conread position: | 7-245 |
| Cow position: | chr4:25972622-25972855 (view UCSC Genome Browser custom track) |
| Alignm length: | 243 |
| Alignm identity: | 178 |
| Alignm E-value: | 1e-34 |
| Alignm gaps (pig, cow): | 13, 60 |
| Conread position: | 12-248 |
| Cow position: | chr4:25906593-25906367 (view UCSC Genome Browser custom track) |
| Alignm length: | 237 |
| Alignm identity: | 174 |
| Alignm E-value: | 4e-35 |
| Alignm gaps (pig, cow): | 28, 0 |
| Conread position: | 16-207 |
| Cow position: | chr4:5797701-5797892 (view UCSC Genome Browser custom track) |
| Alignm length: | 197 |
| Alignm identity: | 151 |
| Alignm E-value: | 4e-34 |
| Alignm gaps (pig, cow): | 39, 97 |
| Conread position: | 18-214 |
| Cow position: | chr4:35930165-35930359 (view UCSC Genome Browser custom track) |
| Alignm length: | 199 |
| Alignm identity: | 145 |
| Alignm E-value: | 7e-30 |
| Alignm gaps (pig, cow): | 151, 111 |
| Conread position: | 18-245 |
| Cow position: | chr4:22528651-22528428 (view UCSC Genome Browser custom track) |
| Alignm length: | 230 |
| Alignm identity: | 177 |
| Alignm E-value: | 9.94922e-44 |
| Alignm gaps (pig, cow): | 194, 22 |
| Conread position: | 18-245 |
| Cow position: | chr4:58512827-58512602 (view UCSC Genome Browser custom track) |
| Alignm length: | 233 |
| Alignm identity: | 171 |
| Alignm E-value: | 3e-33 |
| Alignm gaps (pig, cow): | 151, 19 |
| Conread position: | 18-246 |
| Cow position: | chr4:27561132-27561356 (view UCSC Genome Browser custom track) |
| Alignm length: | 230 |
| Alignm identity: | 171 |
| Alignm E-value: | 7e-40 |
| Alignm gaps (pig, cow): | 194, 90 |
| Conread position: | 18-248 |
| Cow position: | chr4:24415021-24415247 (view UCSC Genome Browser custom track) |
| Alignm length: | 234 |
| Alignm identity: | 171 |
| Alignm E-value: | 1e-33 |
| Alignm gaps (pig, cow): | 28, 64 |
| Conread position: | 18-257 |
| Cow position: | chr4:22115342-22115579 (view UCSC Genome Browser custom track) |
| Alignm length: | 243 |
| Alignm identity: | 185 |
| Alignm E-value: | 4.2039e-45 |
| Alignm gaps (pig, cow): | 180, 92 |
| Conread position: | 18-440 |
| Cow position: | chr4:10837619-10837190 (view UCSC Genome Browser custom track) |
| Alignm length: | 438 |
| Alignm identity: | 274 |
| Alignm E-value: | 4e-25 |
| Alignm gaps (pig, cow): | 85, 223 |
| Conread position: | 19-257 |
| Cow position: | chr4:54146738-54146492 (view UCSC Genome Browser custom track) |
| Alignm length: | 253 |
| Alignm identity: | 181 |
| Alignm E-value: | 2e-28 |
| Alignm gaps (pig, cow): | 150, 91 |
| Conread position: | 20-245 |
| Cow position: | chr4:46083158-46082934 (view UCSC Genome Browser custom track) |
| Alignm length: | 230 |
| Alignm identity: | 170 |
| Alignm E-value: | 1e-35 |
| Alignm gaps (pig, cow): | 39, 146 |
| Conread position: | 20-248 |
| Cow position: | chr4:31172404-31172636 (view UCSC Genome Browser custom track) |
| Alignm length: | 234 |
| Alignm identity: | 180 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 37, 147 |
| Conread position: | 21-245 |
| Cow position: | chr4:26541470-26541699 (view UCSC Genome Browser custom track) |
| Alignm length: | 231 |
| Alignm identity: | 174 |
| Alignm E-value: | 8.00001e-41 |
| Alignm gaps (pig, cow): | 41, 19 |
| Conread position: | 22-206 |
| Cow position: | chr4:48283832-48284009 (view UCSC Genome Browser custom track) |
| Alignm length: | 185 |
| Alignm identity: | 143 |
| Alignm E-value: | 1e-33 |
| Alignm gaps (pig, cow): | 65, 0 |
| Conread position: | 23-196 |
| Cow position: | chr4:24187877-24187705 (view UCSC Genome Browser custom track) |
| Alignm length: | 174 |
| Alignm identity: | 138 |
| Alignm E-value: | 2e-38 |
| Alignm gaps (pig, cow): | 140, 0 |
| Conread position: | 28-245 |
| Cow position: | chr4:9845667-9845876 (view UCSC Genome Browser custom track) |
| Alignm length: | 221 |
| Alignm identity: | 166 |
| Alignm E-value: | 1e-32 |
| Alignm gaps (pig, cow): | 31, 22 |
| Conread position: | 35-216 |
| Cow position: | chr4:58948159-58947981 (view UCSC Genome Browser custom track) |
| Alignm length: | 185 |
| Alignm identity: | 147 |
| Alignm E-value: | 1e-35 |
| Alignm gaps (pig, cow): | 63, 41 |
| Conread position: | 41-206 |
| Cow position: | chr4:8649999-8650158 (view UCSC Genome Browser custom track) |
| Alignm length: | 166 |
| Alignm identity: | 127 |
| Alignm E-value: | 2e-28 |
| Alignm gaps (pig, cow): | 85, 0 |
| Conread position: | 58-210 |
| Cow position: | chr4:9547755-9547899 (view UCSC Genome Browser custom track) |
| Alignm length: | 153 |
| Alignm identity: | 120 |
| Alignm E-value: | 2e-26 |
| Alignm gaps (pig, cow): | 11, 0 |
| Conread position: | 58-257 |
| Cow position: | chr4:21258992-21259186 (view UCSC Genome Browser custom track) |
| Alignm length: | 201 |
| Alignm identity: | 148 |
| Alignm E-value: | 3e-31 |
| Alignm gaps (pig, cow): | 154, 52 |
| Conread position: | 73-242 |
| Cow position: | chr4:68634754-68634915 (view UCSC Genome Browser custom track) |
| Alignm length: | 171 |
| Alignm identity: | 126 |
| Alignm E-value: | 3e-22 |
| Alignm gaps (pig, cow): | 7, 35 |
| Conread position: | 98-245 |
| Cow position: | chr4:50769952-50769808 (view UCSC Genome Browser custom track) |
| Alignm length: | 149 |
| Alignm identity: | 113 |
| Alignm E-value: | 3e-23 |
| Alignm gaps (pig, cow): | 114, 23 |
| Conread position: | 101-249 |
| Cow position: | chr4:23758619-23758767 (view UCSC Genome Browser custom track) |
| Alignm length: | 150 |
| Alignm identity: | 115 |
| Alignm E-value: | 5e-27 |
| Alignm gaps (pig, cow): | 111, 62 |
| Conread position: | 102-259 |
| Cow position: | chr4:23166721-23166877 (view UCSC Genome Browser custom track) |
| Alignm length: | 159 |
| Alignm identity: | 116 |
| Alignm E-value: | 1e-22 |
| Alignm gaps (pig, cow): | 110, 6 |
| Conread position: | 104-245 |
| Cow position: | chr4:41154463-41154603 (view UCSC Genome Browser custom track) |
| Alignm length: | 143 |
| Alignm identity: | 108 |
| Alignm E-value: | 1e-22 |
| Alignm gaps (pig, cow): | 108, 8 |
| Conread position: | 122-386 |
| Cow position: | chr4:63784286-63784014 (view UCSC Genome Browser custom track) |
| Alignm length: | 274 |
| Alignm identity: | 186 |
| Alignm E-value: | 2e-29 |
| Alignm gaps (pig, cow): | 18, 234 |
| Conread position: | 249-392 |
| Cow position: | chr4:5797970-5798110 (view UCSC Genome Browser custom track) |
| Alignm length: | 144 |
| Alignm identity: | 109 |
| Alignm E-value: | 3e-23 |
| Alignm gaps (pig, cow): | 33, 0 |
| Conread position: | 251-398 |
| Cow position: | chr4:17304387-17304242 (view UCSC Genome Browser custom track) |
| Alignm length: | 150 |
| Alignm identity: | 116 |
| Alignm E-value: | 1e-24 |
| Alignm gaps (pig, cow): | 100, 28 |
| Conread position: | 255-387 |
| Cow position: | chr4:37880945-37881072 (view UCSC Genome Browser custom track) |
| Alignm length: | 133 |
| Alignm identity: | 105 |
| Alignm E-value: | 3e-23 |
| Alignm gaps (pig, cow): | 33, 0 |
| Conread position: | 255-410 |
| Cow position: | chr4:40433892-40433743 (view UCSC Genome Browser custom track) |
| Alignm length: | 156 |
| Alignm identity: | 116 |
| Alignm E-value: | 1e-22 |
| Alignm gaps (pig, cow): | 33, 0 |
| Conread position: | 257-409 |
| Cow position: | chr4:50769755-50769605 (view UCSC Genome Browser custom track) |
| Alignm length: | 153 |
| Alignm identity: | 113 |
| Alignm E-value: | 1e-23 |
| Alignm gaps (pig, cow): | 31, 0 |
| Conread position: | 258-398 |
| Cow position: | chr4:22115618-22115754 (view UCSC Genome Browser custom track) |
| Alignm length: | 143 |
| Alignm identity: | 110 |
| Alignm E-value: | 3e-21 |
| Alignm gaps (pig, cow): | 119, 25 |
| Conread position: | 258-410 |
| Cow position: | chr4:1799919-1800068 (view UCSC Genome Browser custom track) |
| Alignm length: | 154 |
| Alignm identity: | 116 |
| Alignm E-value: | 1e-23 |
| Alignm gaps (pig, cow): | 131, 22 |
| Conread position: | 259-410 |
| Cow position: | chr4:20161470-20161319 (view UCSC Genome Browser custom track) |
| Alignm length: | 155 |
| Alignm identity: | 117 |
| Alignm E-value: | 1e-23 |
| Alignm gaps (pig, cow): | 70, 24 |
| Conread position: | 260-392 |
| Cow position: | chr4:24415575-24415704 (view UCSC Genome Browser custom track) |
| Alignm length: | 133 |
| Alignm identity: | 106 |
| Alignm E-value: | 5e-26 |
| Alignm gaps (pig, cow): | 23, 0 |
| Conread position: | 260-433 |
| Cow position: | chr4:9547970-9548138 (view UCSC Genome Browser custom track) |
| Alignm length: | 176 |
| Alignm identity: | 128 |
| Alignm E-value: | 9e-22 |
| Alignm gaps (pig, cow): | 140, 23 |
| Conread position: | 261-429 |
| Cow position: | chr4:51433427-51433593 (view UCSC Genome Browser custom track) |
| Alignm length: | 172 |
| Alignm identity: | 128 |
| Alignm E-value: | 1e-24 |
| Alignm gaps (pig, cow): | 140, 8 |
| Conread position: | 261-447 |
| Cow position: | chr4:35471334-35471516 (view UCSC Genome Browser custom track) |
| Alignm length: | 189 |
| Alignm identity: | 136 |
| Alignm E-value: | 1e-23 |
| Alignm gaps (pig, cow): | 139, 30 |
| Conread position: | 263-387 |
| Cow position: | chr4:22528369-22528248 (view UCSC Genome Browser custom track) |
| Alignm length: | 125 |
| Alignm identity: | 96 |
| Alignm E-value: | 8e-21 |
| Alignm gaps (pig, cow): | 27, 0 |
| Conread position: | 263-410 |
| Cow position: | chr4:22249431-22249287 (view UCSC Genome Browser custom track) |
| Alignm length: | 150 |
| Alignm identity: | 114 |
| Alignm E-value: | 9e-22 |
| Alignm gaps (pig, cow): | 137, 24 |
| Conread position: | 263-410 |
| Cow position: | chr4:65604454-65604312 (view UCSC Genome Browser custom track) |
| Alignm length: | 148 |
| Alignm identity: | 112 |
| Alignm E-value: | 3e-23 |
| Alignm gaps (pig, cow): | 25, 0 |
| Conread position: | 263-422 |
| Cow position: | chr4:54146448-54146292 (view UCSC Genome Browser custom track) |
| Alignm length: | 161 |
| Alignm identity: | 120 |
| Alignm E-value: | 1e-24 |
| Alignm gaps (pig, cow): | 147, 20 |
| Conread position: | 265-398 |
| Cow position: | chr4:31172693-31172821 (view UCSC Genome Browser custom track) |
| Alignm length: | 134 |
| Alignm identity: | 103 |
| Alignm E-value: | 8e-21 |
| Alignm gaps (pig, cow): | 18, 0 |
| Conread position: | 266-387 |
| Cow position: | chr4:23758824-23758942 (view UCSC Genome Browser custom track) |
| Alignm length: | 122 |
| Alignm identity: | 99 |
| Alignm E-value: | 1e-24 |
| Alignm gaps (pig, cow): | 17, 0 |
Show alignments to all cow chromosomes.