Cow genome map
| Conread name: | Pig4-TMW8003J24 |
| Conread position: | 1-245 |
| Cow position: | chr6:44372179-44371941 (view UCSC Genome Browser custom track) |
| Alignm length: | 248 |
| Alignm identity: | 182 |
| Alignm E-value: | 5e-37 |
| Alignm gaps (pig, cow): | 14, 111 |
| Conread position: | 1-248 |
| Cow position: | chr6:12387556-12387317 (view UCSC Genome Browser custom track) |
| Alignm length: | 248 |
| Alignm identity: | 183 |
| Alignm E-value: | 8.00001e-41 |
| Alignm gaps (pig, cow): | 22, 0 |
| Conread position: | 1-248 |
| Cow position: | chr6:47625195-47624955 (view UCSC Genome Browser custom track) |
| Alignm length: | 252 |
| Alignm identity: | 184 |
| Alignm E-value: | 4e-35 |
| Alignm gaps (pig, cow): | 19, 41 |
| Conread position: | 8-398 |
| Cow position: | chr6:22968847-22969253 (view UCSC Genome Browser custom track) |
| Alignm length: | 412 |
| Alignm identity: | 287 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 26, 158 |
| Conread position: | 11-247 |
| Cow position: | chr6:47327292-47327058 (view UCSC Genome Browser custom track) |
| Alignm length: | 239 |
| Alignm identity: | 174 |
| Alignm E-value: | 2e-37 |
| Alignm gaps (pig, cow): | 35, 105 |
| Conread position: | 11-257 |
| Cow position: | chr6:56376571-56376334 (view UCSC Genome Browser custom track) |
| Alignm length: | 248 |
| Alignm identity: | 180 |
| Alignm E-value: | 4e-36 |
| Alignm gaps (pig, cow): | 201, 39 |
| Conread position: | 12-206 |
| Cow position: | chr6:52002146-52002334 (view UCSC Genome Browser custom track) |
| Alignm length: | 195 |
| Alignm identity: | 148 |
| Alignm E-value: | 1e-34 |
| Alignm gaps (pig, cow): | 92, 0 |
| Conread position: | 12-247 |
| Cow position: | chr6:1891068-1890837 (view UCSC Genome Browser custom track) |
| Alignm length: | 238 |
| Alignm identity: | 182 |
| Alignm E-value: | 9.94922e-44 |
| Alignm gaps (pig, cow): | 120, 33 |
| Conread position: | 13-244 |
| Cow position: | chr6:58315827-58316051 (view UCSC Genome Browser custom track) |
| Alignm length: | 233 |
| Alignm identity: | 163 |
| Alignm E-value: | 6e-29 |
| Alignm gaps (pig, cow): | 199, 33 |
| Conread position: | 13-248 |
| Cow position: | chr6:24649626-24649860 (view UCSC Genome Browser custom track) |
| Alignm length: | 240 |
| Alignm identity: | 180 |
| Alignm E-value: | 2e-40 |
| Alignm gaps (pig, cow): | 87, 27 |
| Conread position: | 17-290 |
| Cow position: | chr6:17669092-17669345 (view UCSC Genome Browser custom track) |
| Alignm length: | 276 |
| Alignm identity: | 197 |
| Alignm E-value: | 3e-31 |
| Alignm gaps (pig, cow): | 195, 62 |
| Conread position: | 18-195 |
| Cow position: | chr6:33984748-33984923 (view UCSC Genome Browser custom track) |
| Alignm length: | 180 |
| Alignm identity: | 126 |
| Alignm E-value: | 8e-21 |
| Alignm gaps (pig, cow): | 10, 94 |
| Conread position: | 18-199 |
| Cow position: | chr6:64426972-64427151 (view UCSC Genome Browser custom track) |
| Alignm length: | 185 |
| Alignm identity: | 134 |
| Alignm E-value: | 4e-24 |
| Alignm gaps (pig, cow): | 23, 93 |
| Conread position: | 18-211 |
| Cow position: | chr6:9026300-9026488 (view UCSC Genome Browser custom track) |
| Alignm length: | 194 |
| Alignm identity: | 152 |
| Alignm E-value: | 6e-39 |
| Alignm gaps (pig, cow): | 99, 0 |
| Conread position: | 18-244 |
| Cow position: | chr6:19427232-19427458 (view UCSC Genome Browser custom track) |
| Alignm length: | 228 |
| Alignm identity: | 175 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 194, 145 |
| Conread position: | 18-245 |
| Cow position: | chr6:8318383-8318158 (view UCSC Genome Browser custom track) |
| Alignm length: | 231 |
| Alignm identity: | 178 |
| Alignm E-value: | 9.94922e-44 |
| Alignm gaps (pig, cow): | 41, 88 |
| Conread position: | 18-247 |
| Cow position: | chr6:20379682-20379459 (view UCSC Genome Browser custom track) |
| Alignm length: | 234 |
| Alignm identity: | 171 |
| Alignm E-value: | 1e-32 |
| Alignm gaps (pig, cow): | 185, 105 |
| Conread position: | 18-248 |
| Cow position: | chr6:35415738-35415510 (view UCSC Genome Browser custom track) |
| Alignm length: | 235 |
| Alignm identity: | 174 |
| Alignm E-value: | 5e-37 |
| Alignm gaps (pig, cow): | 73, 22 |
| Conread position: | 18-249 |
| Cow position: | chr6:6731047-6731275 (view UCSC Genome Browser custom track) |
| Alignm length: | 232 |
| Alignm identity: | 169 |
| Alignm E-value: | 2e-38 |
| Alignm gaps (pig, cow): | 84, 0 |
| Conread position: | 18-262 |
| Cow position: | chr6:54807006-54807249 (view UCSC Genome Browser custom track) |
| Alignm length: | 246 |
| Alignm identity: | 189 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 194, 214 |
| Conread position: | 18-263 |
| Cow position: | chr6:64436547-64436300 (view UCSC Genome Browser custom track) |
| Alignm length: | 251 |
| Alignm identity: | 188 |
| Alignm E-value: | 2.94273e-44 |
| Alignm gaps (pig, cow): | 153, 82 |
| Conread position: | 18-354 |
| Cow position: | chr6:38895292-38894960 (view UCSC Genome Browser custom track) |
| Alignm length: | 348 |
| Alignm identity: | 251 |
| Alignm E-value: | 1.4013e-45 |
| Alignm gaps (pig, cow): | 41, 32 |
| Conread position: | 20-245 |
| Cow position: | chr6:44511024-44511249 (view UCSC Genome Browser custom track) |
| Alignm length: | 229 |
| Alignm identity: | 168 |
| Alignm E-value: | 4e-36 |
| Alignm gaps (pig, cow): | 26, 98 |
| Conread position: | 33-409 |
| Cow position: | chr6:16220228-16219851 (view UCSC Genome Browser custom track) |
| Alignm length: | 388 |
| Alignm identity: | 278 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 184, 13 |
| Conread position: | 40-248 |
| Cow position: | chr6:6367856-6367661 (view UCSC Genome Browser custom track) |
| Alignm length: | 210 |
| Alignm identity: | 149 |
| Alignm E-value: | 3e-23 |
| Alignm gaps (pig, cow): | 172, 47 |
| Conread position: | 40-249 |
| Cow position: | chr6:54144106-54144315 (view UCSC Genome Browser custom track) |
| Alignm length: | 211 |
| Alignm identity: | 151 |
| Alignm E-value: | 3e-32 |
| Alignm gaps (pig, cow): | 172, 123 |
| Conread position: | 40-395 |
| Cow position: | chr6:10237176-10237527 (view UCSC Genome Browser custom track) |
| Alignm length: | 367 |
| Alignm identity: | 255 |
| Alignm E-value: | 8.00001e-41 |
| Alignm gaps (pig, cow): | 172, 70 |
| Conread position: | 54-338 |
| Cow position: | chr6:67436806-67437102 (view UCSC Genome Browser custom track) |
| Alignm length: | 303 |
| Alignm identity: | 208 |
| Alignm E-value: | 2e-26 |
| Alignm gaps (pig, cow): | 7, 57 |
| Conread position: | 58-246 |
| Cow position: | chr6:16634397-16634211 (view UCSC Genome Browser custom track) |
| Alignm length: | 190 |
| Alignm identity: | 145 |
| Alignm E-value: | 4e-35 |
| Alignm gaps (pig, cow): | 154, 52 |
| Conread position: | 80-199 |
| Cow position: | chr6:24583389-24583270 (view UCSC Genome Browser custom track) |
| Alignm length: | 120 |
| Alignm identity: | 99 |
| Alignm E-value: | 6e-28 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 100-206 |
| Cow position: | chr6:30160184-30160289 (view UCSC Genome Browser custom track) |
| Alignm length: | 107 |
| Alignm identity: | 88 |
| Alignm E-value: | 1e-22 |
| Alignm gaps (pig, cow): | 63, 0 |
| Conread position: | 102-199 |
| Cow position: | chr6:16733250-16733347 (view UCSC Genome Browser custom track) |
| Alignm length: | 98 |
| Alignm identity: | 81 |
| Alignm E-value: | 3e-21 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 110-264 |
| Cow position: | chr6:52731276-52731126 (view UCSC Genome Browser custom track) |
| Alignm length: | 155 |
| Alignm identity: | 113 |
| Alignm E-value: | 8e-21 |
| Alignm gaps (pig, cow): | 53, 0 |
| Conread position: | 249-409 |
| Cow position: | chr6:28164876-28165034 (view UCSC Genome Browser custom track) |
| Alignm length: | 163 |
| Alignm identity: | 122 |
| Alignm E-value: | 1e-23 |
| Alignm gaps (pig, cow): | 151, 32 |
| Conread position: | 249-426 |
| Cow position: | chr6:15782463-15782289 (view UCSC Genome Browser custom track) |
| Alignm length: | 180 |
| Alignm identity: | 132 |
| Alignm E-value: | 4e-25 |
| Alignm gaps (pig, cow): | 151, 34 |
| Conread position: | 257-409 |
| Cow position: | chr6:47192465-47192316 (view UCSC Genome Browser custom track) |
| Alignm length: | 155 |
| Alignm identity: | 116 |
| Alignm E-value: | 3e-21 |
| Alignm gaps (pig, cow): | 143, 26 |
| Conread position: | 257-410 |
| Cow position: | chr6:13718823-13718975 (view UCSC Genome Browser custom track) |
| Alignm length: | 156 |
| Alignm identity: | 115 |
| Alignm E-value: | 3e-22 |
| Alignm gaps (pig, cow): | 143, 41 |
| Conread position: | 260-432 |
| Cow position: | chr6:59496282-59496446 (view UCSC Genome Browser custom track) |
| Alignm length: | 173 |
| Alignm identity: | 131 |
| Alignm E-value: | 2e-26 |
| Alignm gaps (pig, cow): | 21, 0 |
| Conread position: | 263-437 |
| Cow position: | chr6:30160384-30160555 (view UCSC Genome Browser custom track) |
| Alignm length: | 176 |
| Alignm identity: | 129 |
| Alignm E-value: | 1e-25 |
| Alignm gaps (pig, cow): | 134, 20 |
| Conread position: | 265-437 |
| Cow position: | chr6:54144370-54144539 (view UCSC Genome Browser custom track) |
| Alignm length: | 174 |
| Alignm identity: | 127 |
| Alignm E-value: | 1e-24 |
| Alignm gaps (pig, cow): | 156, 22 |
| Conread position: | 266-385 |
| Cow position: | chr6:19427519-19427635 (view UCSC Genome Browser custom track) |
| Alignm length: | 120 |
| Alignm identity: | 94 |
| Alignm E-value: | 8e-21 |
| Alignm gaps (pig, cow): | 14, 0 |
| Conread position: | 267-410 |
| Cow position: | chr6:53264728-53264591 (view UCSC Genome Browser custom track) |
| Alignm length: | 144 |
| Alignm identity: | 111 |
| Alignm E-value: | 1e-22 |
| Alignm gaps (pig, cow): | 13, 0 |
Show alignments to all cow chromosomes.