Cow genome map
| Conread name: | Pig4-TMW8003J24 |
| Conread position: | 1-206 |
| Cow position: | chr8:20311270-20311468 (view UCSC Genome Browser custom track) |
| Alignm length: | 210 |
| Alignm identity: | 154 |
| Alignm E-value: | 1e-26 |
| Alignm gaps (pig, cow): | 38, 95 |
| Conread position: | 1-209 |
| Cow position: | chr8:966610-966816 (view UCSC Genome Browser custom track) |
| Alignm length: | 212 |
| Alignm identity: | 158 |
| Alignm E-value: | 1e-34 |
| Alignm gaps (pig, cow): | 19, 112 |
| Conread position: | 1-236 |
| Cow position: | chr8:29028344-29028113 (view UCSC Genome Browser custom track) |
| Alignm length: | 237 |
| Alignm identity: | 178 |
| Alignm E-value: | 8.00141e-43 |
| Alignm gaps (pig, cow): | 211, 19 |
| Conread position: | 1-243 |
| Cow position: | chr8:3433612-3433851 (view UCSC Genome Browser custom track) |
| Alignm length: | 244 |
| Alignm identity: | 185 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 210, 161 |
| Conread position: | 1-245 |
| Cow position: | chr8:4161292-4161050 (view UCSC Genome Browser custom track) |
| Alignm length: | 249 |
| Alignm identity: | 187 |
| Alignm E-value: | 8.00141e-43 |
| Alignm gaps (pig, cow): | 15, 111 |
| Conread position: | 1-246 |
| Cow position: | chr8:35218090-35218348 (view UCSC Genome Browser custom track) |
| Alignm length: | 264 |
| Alignm identity: | 192 |
| Alignm E-value: | 2e-31 |
| Alignm gaps (pig, cow): | 101, 19 |
| Conread position: | 1-250 |
| Cow position: | chr8:37090345-37090101 (view UCSC Genome Browser custom track) |
| Alignm length: | 254 |
| Alignm identity: | 180 |
| Alignm E-value: | 7e-31 |
| Alignm gaps (pig, cow): | 166, 76 |
| Conread position: | 1-393 |
| Cow position: | chr8:24933887-24934277 (view UCSC Genome Browser custom track) |
| Alignm length: | 403 |
| Alignm identity: | 285 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 19, 51 |
| Conread position: | 4-168 |
| Cow position: | chr8:6755212-6755052 (view UCSC Genome Browser custom track) |
| Alignm length: | 165 |
| Alignm identity: | 120 |
| Alignm E-value: | 1e-23 |
| Alignm gaps (pig, cow): | 46, 0 |
| Conread position: | 6-370 |
| Cow position: | chr8:9962831-9962458 (view UCSC Genome Browser custom track) |
| Alignm length: | 381 |
| Alignm identity: | 263 |
| Alignm E-value: | 2.8026e-45 |
| Alignm gaps (pig, cow): | 56, 226 |
| Conread position: | 11-272 |
| Cow position: | chr8:1841142-1840884 (view UCSC Genome Browser custom track) |
| Alignm length: | 270 |
| Alignm identity: | 193 |
| Alignm E-value: | 3e-32 |
| Alignm gaps (pig, cow): | 151, 67 |
| Conread position: | 11-358 |
| Cow position: | chr8:24909364-24909715 (view UCSC Genome Browser custom track) |
| Alignm length: | 368 |
| Alignm identity: | 253 |
| Alignm E-value: | 8e-32 |
| Alignm gaps (pig, cow): | 9, 30 |
| Conread position: | 12-204 |
| Cow position: | chr8:18220978-18220790 (view UCSC Genome Browser custom track) |
| Alignm length: | 194 |
| Alignm identity: | 144 |
| Alignm E-value: | 2e-31 |
| Alignm gaps (pig, cow): | 74, 99 |
| Conread position: | 12-224 |
| Cow position: | chr8:52863560-52863768 (view UCSC Genome Browser custom track) |
| Alignm length: | 214 |
| Alignm identity: | 157 |
| Alignm E-value: | 1e-33 |
| Alignm gaps (pig, cow): | 180, 28 |
| Conread position: | 12-267 |
| Cow position: | chr8:50953313-50953563 (view UCSC Genome Browser custom track) |
| Alignm length: | 260 |
| Alignm identity: | 183 |
| Alignm E-value: | 7e-31 |
| Alignm gaps (pig, cow): | 157, 56 |
| Conread position: | 14-266 |
| Cow position: | chr8:35436864-35436616 (view UCSC Genome Browser custom track) |
| Alignm length: | 256 |
| Alignm identity: | 193 |
| Alignm E-value: | 9.80909e-45 |
| Alignm gaps (pig, cow): | 198, 26 |
| Conread position: | 18-241 |
| Cow position: | chr8:9811546-9811770 (view UCSC Genome Browser custom track) |
| Alignm length: | 231 |
| Alignm identity: | 168 |
| Alignm E-value: | 2e-30 |
| Alignm gaps (pig, cow): | 41, 91 |
| Conread position: | 18-244 |
| Cow position: | chr8:13975652-13975867 (view UCSC Genome Browser custom track) |
| Alignm length: | 227 |
| Alignm identity: | 169 |
| Alignm E-value: | 1e-35 |
| Alignm gaps (pig, cow): | 31, 0 |
| Conread position: | 18-249 |
| Cow position: | chr8:3147784-3147562 (view UCSC Genome Browser custom track) |
| Alignm length: | 234 |
| Alignm identity: | 182 |
| Alignm E-value: | 8.96831e-44 |
| Alignm gaps (pig, cow): | 151, 22 |
| Conread position: | 18-254 |
| Cow position: | chr8:43904534-43904770 (view UCSC Genome Browser custom track) |
| Alignm length: | 240 |
| Alignm identity: | 176 |
| Alignm E-value: | 5e-39 |
| Alignm gaps (pig, cow): | 27, 146 |
| Conread position: | 18-281 |
| Cow position: | chr8:39936256-39936522 (view UCSC Genome Browser custom track) |
| Alignm length: | 269 |
| Alignm identity: | 193 |
| Alignm E-value: | 1.99993e-41 |
| Alignm gaps (pig, cow): | 151, 236 |
| Conread position: | 18-393 |
| Cow position: | chr8:11249705-11249317 (view UCSC Genome Browser custom track) |
| Alignm length: | 398 |
| Alignm identity: | 258 |
| Alignm E-value: | 1e-23 |
| Alignm gaps (pig, cow): | 29, 75 |
| Conread position: | 19-249 |
| Cow position: | chr8:47295731-47295960 (view UCSC Genome Browser custom track) |
| Alignm length: | 232 |
| Alignm identity: | 161 |
| Alignm E-value: | 7e-31 |
| Alignm gaps (pig, cow): | 193, 144 |
| Conread position: | 20-263 |
| Cow position: | chr8:30135671-30135916 (view UCSC Genome Browser custom track) |
| Alignm length: | 249 |
| Alignm identity: | 187 |
| Alignm E-value: | 8.96831e-44 |
| Alignm gaps (pig, cow): | 26, 120 |
| Conread position: | 22-247 |
| Cow position: | chr8:48763321-48763534 (view UCSC Genome Browser custom track) |
| Alignm length: | 226 |
| Alignm identity: | 165 |
| Alignm E-value: | 8e-32 |
| Alignm gaps (pig, cow): | 16, 0 |
| Conread position: | 25-248 |
| Cow position: | chr8:24546292-24546504 (view UCSC Genome Browser custom track) |
| Alignm length: | 225 |
| Alignm identity: | 165 |
| Alignm E-value: | 2e-31 |
| Alignm gaps (pig, cow): | 21, 90 |
| Conread position: | 30-243 |
| Cow position: | chr8:37008147-37007941 (view UCSC Genome Browser custom track) |
| Alignm length: | 215 |
| Alignm identity: | 157 |
| Alignm E-value: | 7e-31 |
| Alignm gaps (pig, cow): | 184, 57 |
| Conread position: | 36-248 |
| Cow position: | chr8:36505138-36505356 (view UCSC Genome Browser custom track) |
| Alignm length: | 224 |
| Alignm identity: | 164 |
| Alignm E-value: | 6e-29 |
| Alignm gaps (pig, cow): | 22, 10 |
| Conread position: | 39-358 |
| Cow position: | chr8:31317314-31317640 (view UCSC Genome Browser custom track) |
| Alignm length: | 332 |
| Alignm identity: | 247 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 60, 125 |
| Conread position: | 40-248 |
| Cow position: | chr8:25572828-25573033 (view UCSC Genome Browser custom track) |
| Alignm length: | 211 |
| Alignm identity: | 152 |
| Alignm E-value: | 6e-30 |
| Alignm gaps (pig, cow): | 172, 70 |
| Conread position: | 41-248 |
| Cow position: | chr8:52195696-52195898 (view UCSC Genome Browser custom track) |
| Alignm length: | 209 |
| Alignm identity: | 155 |
| Alignm E-value: | 1e-33 |
| Alignm gaps (pig, cow): | 171, 76 |
| Conread position: | 55-241 |
| Cow position: | chr8:28221777-28221592 (view UCSC Genome Browser custom track) |
| Alignm length: | 188 |
| Alignm identity: | 150 |
| Alignm E-value: | 1.99993e-41 |
| Alignm gaps (pig, cow): | 157, 108 |
| Conread position: | 58-248 |
| Cow position: | chr8:31690595-31690785 (view UCSC Genome Browser custom track) |
| Alignm length: | 192 |
| Alignm identity: | 144 |
| Alignm E-value: | 1e-34 |
| Alignm gaps (pig, cow): | 154, 105 |
| Conread position: | 61-387 |
| Cow position: | chr8:11896015-11896361 (view UCSC Genome Browser custom track) |
| Alignm length: | 353 |
| Alignm identity: | 246 |
| Alignm E-value: | 3e-34 |
| Alignm gaps (pig, cow): | 139, 11 |
| Conread position: | 65-248 |
| Cow position: | chr8:20131625-20131809 (view UCSC Genome Browser custom track) |
| Alignm length: | 185 |
| Alignm identity: | 139 |
| Alignm E-value: | 3e-34 |
| Alignm gaps (pig, cow): | 147, 0 |
| Conread position: | 215-434 |
| Cow position: | chr8:51959429-51959202 (view UCSC Genome Browser custom track) |
| Alignm length: | 231 |
| Alignm identity: | 161 |
| Alignm E-value: | 3e-22 |
| Alignm gaps (pig, cow): | 17, 75 |
| Conread position: | 246-410 |
| Cow position: | chr8:18001244-18001086 (view UCSC Genome Browser custom track) |
| Alignm length: | 165 |
| Alignm identity: | 120 |
| Alignm E-value: | 2e-21 |
| Alignm gaps (pig, cow): | 35, 0 |
| Conread position: | 246-420 |
| Cow position: | chr8:29935940-29936108 (view UCSC Genome Browser custom track) |
| Alignm length: | 176 |
| Alignm identity: | 128 |
| Alignm E-value: | 3e-22 |
| Alignm gaps (pig, cow): | 143, 37 |
| Conread position: | 257-406 |
| Cow position: | chr8:20682425-20682575 (view UCSC Genome Browser custom track) |
| Alignm length: | 156 |
| Alignm identity: | 119 |
| Alignm E-value: | 2e-21 |
| Alignm gaps (pig, cow): | 55, 12 |
| Conread position: | 257-413 |
| Cow position: | chr8:34318044-34317888 (view UCSC Genome Browser custom track) |
| Alignm length: | 158 |
| Alignm identity: | 120 |
| Alignm E-value: | 5e-28 |
| Alignm gaps (pig, cow): | 146, 136 |
| Conread position: | 260-385 |
| Cow position: | chr8:13975924-13976045 (view UCSC Genome Browser custom track) |
| Alignm length: | 127 |
| Alignm identity: | 102 |
| Alignm E-value: | 3e-22 |
| Alignm gaps (pig, cow): | 103, 31 |
| Conread position: | 260-430 |
| Cow position: | chr8:39017738-39017908 (view UCSC Genome Browser custom track) |
| Alignm length: | 174 |
| Alignm identity: | 127 |
| Alignm E-value: | 1e-23 |
| Alignm gaps (pig, cow): | 129, 29 |
| Conread position: | 260-443 |
| Cow position: | chr8:35218399-35218581 (view UCSC Genome Browser custom track) |
| Alignm length: | 187 |
| Alignm identity: | 131 |
| Alignm E-value: | 7e-21 |
| Alignm gaps (pig, cow): | 129, 23 |
| Conread position: | 261-408 |
| Cow position: | chr8:9811836-9811977 (view UCSC Genome Browser custom track) |
| Alignm length: | 148 |
| Alignm identity: | 111 |
| Alignm E-value: | 7e-21 |
| Alignm gaps (pig, cow): | 9, 0 |
| Conread position: | 263-386 |
| Cow position: | chr8:52195990-52196110 (view UCSC Genome Browser custom track) |
| Alignm length: | 124 |
| Alignm identity: | 96 |
| Alignm E-value: | 7e-21 |
| Alignm gaps (pig, cow): | 24, 0 |
| Conread position: | 263-410 |
| Cow position: | chr8:27053564-27053424 (view UCSC Genome Browser custom track) |
| Alignm length: | 148 |
| Alignm identity: | 116 |
| Alignm E-value: | 1e-24 |
| Alignm gaps (pig, cow): | 16, 0 |
| Conread position: | 263-410 |
| Cow position: | chr8:28221530-28221387 (view UCSC Genome Browser custom track) |
| Alignm length: | 148 |
| Alignm identity: | 110 |
| Alignm E-value: | 8e-22 |
| Alignm gaps (pig, cow): | 20, 0 |
| Conread position: | 263-410 |
| Cow position: | chr8:36505412-36505556 (view UCSC Genome Browser custom track) |
| Alignm length: | 149 |
| Alignm identity: | 115 |
| Alignm E-value: | 1e-25 |
| Alignm gaps (pig, cow): | 126, 28 |
| Conread position: | 263-410 |
| Cow position: | chr8:41318072-41318217 (view UCSC Genome Browser custom track) |
| Alignm length: | 150 |
| Alignm identity: | 117 |
| Alignm E-value: | 4e-25 |
| Alignm gaps (pig, cow): | 137, 24 |
| Conread position: | 264-410 |
| Cow position: | chr8:23030669-23030811 (view UCSC Genome Browser custom track) |
| Alignm length: | 148 |
| Alignm identity: | 112 |
| Alignm E-value: | 2e-21 |
| Alignm gaps (pig, cow): | 44, 17 |
| Conread position: | 266-409 |
| Cow position: | chr8:26451162-26451304 (view UCSC Genome Browser custom track) |
| Alignm length: | 147 |
| Alignm identity: | 112 |
| Alignm E-value: | 8e-22 |
| Alignm gaps (pig, cow): | 97, 15 |
| Conread position: | 268-410 |
| Cow position: | chr8:13900439-13900581 (view UCSC Genome Browser custom track) |
| Alignm length: | 147 |
| Alignm identity: | 117 |
| Alignm E-value: | 1e-25 |
| Alignm gaps (pig, cow): | 73, 15 |
Show alignments to all cow chromosomes.