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Cow genome map

           
Conread name:
           
Pig4-TMW8004P22
        

               
Conread position:
               
197-530
               

               
Cow position:
               
chr1:20340729-20341066 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
339
               

               
Alignm identity:
               
229
               

               
Alignm E-value:
               
6.00036e-42
               

               
Alignm gaps (pig, cow):
               
46, 24
               

               
Conread position:
               
215-608
               

               
Cow position:
               
chr1:71795743-71795349 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
397
               

               
Alignm identity:
               
245
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
179, 329
               

               
Conread position:
               
219-574
               

               
Cow position:
               
chr1:91978083-91978432 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
358
               

               
Alignm identity:
               
239
               

               
Alignm E-value:
               
5e-40
               

               
Alignm gaps (pig, cow):
               
150, 32
               

               
Conread position:
               
222-404
               

               
Cow position:
               
chr1:57981609-57981791 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
184
               

               
Alignm identity:
               
129
               

               
Alignm E-value:
               
8e-24
               

               
Alignm gaps (pig, cow):
               
153, 40
               

               
Conread position:
               
226-482
               

               
Cow position:
               
chr1:81579700-81579439 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
265
               

               
Alignm identity:
               
198
               

               
Alignm E-value:
               
2.00386e-43
               

               
Alignm gaps (pig, cow):
               
31, 25
               

               
Conread position:
               
227-608
               

               
Cow position:
               
chr1:85865717-85865354 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
383
               

               
Alignm identity:
               
269
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
220, 75
               

               
Conread position:
               
233-496
               

               
Cow position:
               
chr1:95687175-95687435 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
265
               

               
Alignm identity:
               
181
               

               
Alignm E-value:
               
6e-32
               

               
Alignm gaps (pig, cow):
               
211, 18
               

               
Conread position:
               
238-471
               

               
Cow position:
               
chr1:19657958-19657721 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
239
               

               
Alignm identity:
               
171
               

               
Alignm E-value:
               
7e-34
               

               
Alignm gaps (pig, cow):
               
13, 105
               

               
Conread position:
               
238-607
               

               
Cow position:
               
chr1:15744007-15743635 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
375
               

               
Alignm identity:
               
263
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
11, 308
               

               
Conread position:
               
238-608
               

               
Cow position:
               
chr1:58066778-58067149 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
375
               

               
Alignm identity:
               
268
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
18, 309
               

               
Conread position:
               
251-486
               

               
Cow position:
               
chr1:97513168-97513406 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
239
               

               
Alignm identity:
               
161
               

               
Alignm E-value:
               
1e-27
               

               
Alignm gaps (pig, cow):
               
139, 0
               

               
Conread position:
               
251-608
               

               
Cow position:
               
chr1:26586396-26586038 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
361
               

               
Alignm identity:
               
253
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
143, 304
               

               
Conread position:
               
251-608
               

               
Cow position:
               
chr1:62507070-62507428 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
362
               

               
Alignm identity:
               
254
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
114, 120
               

               
Conread position:
               
251-608
               

               
Cow position:
               
chr1:83137109-83136751 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
361
               

               
Alignm identity:
               
260
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
125, 291
               

               
Conread position:
               
251-608
               

               
Cow position:
               
chr1:86543789-86544147 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
361
               

               
Alignm identity:
               
249
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
143, 304
               

               
Conread position:
               
255-575
               

               
Cow position:
               
chr1:28277557-28277239 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
323
               

               
Alignm identity:
               
234
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
121, 140
               

               
Conread position:
               
255-596
               

               
Cow position:
               
chr1:9593250-9593586 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
344
               

               
Alignm identity:
               
253
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
121, 146
               

               
Conread position:
               
255-596
               

               
Cow position:
               
chr1:40604194-40603854 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
344
               

               
Alignm identity:
               
249
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
136, 111
               

               
Conread position:
               
255-607
               

               
Cow position:
               
chr1:18196766-18196413 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
356
               

               
Alignm identity:
               
262
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
121, 282
               

               
Conread position:
               
255-608
               

               
Cow position:
               
chr1:3381744-3382098 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
357
               

               
Alignm identity:
               
256
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
121, 289
               

               
Conread position:
               
255-608
               

               
Cow position:
               
chr1:7685728-7686081 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
356
               

               
Alignm identity:
               
255
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
121, 283
               

               
Conread position:
               
255-608
               

               
Cow position:
               
chr1:22295528-22295876 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
357
               

               
Alignm identity:
               
256
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
121, 182
               

               
Conread position:
               
255-608
               

               
Cow position:
               
chr1:33547229-33547583 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
357
               

               
Alignm identity:
               
259
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
121, 284
               

               
Conread position:
               
255-608
               

               
Cow position:
               
chr1:52354505-52354857 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
357
               

               
Alignm identity:
               
260
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
121, 252
               

               
Conread position:
               
255-608
               

               
Cow position:
               
chr1:57572003-57571649 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
357
               

               
Alignm identity:
               
250
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
110, 284
               

               
Conread position:
               
255-608
               

               
Cow position:
               
chr1:63601635-63601971 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
355
               

               
Alignm identity:
               
257
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
189, 81
               

               
Conread position:
               
255-608
               

               
Cow position:
               
chr1:66491747-66491394 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
357
               

               
Alignm identity:
               
259
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
127, 289
               

               
Conread position:
               
255-608
               

               
Cow position:
               
chr1:74283154-74283506 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
361
               

               
Alignm identity:
               
252
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
121, 279
               

               
Conread position:
               
255-608
               

               
Cow position:
               
chr1:90913994-90913644 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
357
               

               
Alignm identity:
               
255
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
121, 305
               

               
Conread position:
               
257-542
               

               
Cow position:
               
chr1:29519954-29520244 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
291
               

               
Alignm identity:
               
213
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
118, 0
               

               
Conread position:
               
257-543
               

               
Cow position:
               
chr1:54294754-54295045 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
293
               

               
Alignm identity:
               
221
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
137, 13
               

               
Conread position:
               
257-588
               

               
Cow position:
               
chr1:96488087-96487756 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
335
               

               
Alignm identity:
               
236
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
119, 210
               

               
Conread position:
               
257-599
               

               
Cow position:
               
chr1:97075329-97075672 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
346
               

               
Alignm identity:
               
253
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
119, 290
               

               
Conread position:
               
257-607
               

               
Cow position:
               
chr1:76917237-76916886 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
354
               

               
Alignm identity:
               
249
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
137, 298
               

               
Conread position:
               
258-459
               

               
Cow position:
               
chr1:78291904-78291700 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
205
               

               
Alignm identity:
               
141
               

               
Alignm E-value:
               
3e-24
               

               
Alignm gaps (pig, cow):
               
111, 0
               

               
Conread position:
               
258-468
               

               
Cow position:
               
chr1:33412862-33413076 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
215
               

               
Alignm identity:
               
145
               

               
Alignm E-value:
               
7e-23
               

               
Alignm gaps (pig, cow):
               
118, 0
               

               
Conread position:
               
258-487
               

               
Cow position:
               
chr1:46710202-46710433 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
233
               

               
Alignm identity:
               
160
               

               
Alignm E-value:
               
1e-28
               

               
Alignm gaps (pig, cow):
               
136, 182
               

               
Conread position:
               
258-490
               

               
Cow position:
               
chr1:30692807-30693043 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
237
               

               
Alignm identity:
               
165
               

               
Alignm E-value:
               
6e-32
               

               
Alignm gaps (pig, cow):
               
126, 0
               

               
Conread position:
               
258-502
               

               
Cow position:
               
chr1:97502614-97502372 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
251
               

               
Alignm identity:
               
172
               

               
Alignm E-value:
               
3e-25
               

               
Alignm gaps (pig, cow):
               
118, 162
               

               
Conread position:
               
258-505
               

               
Cow position:
               
chr1:80356562-80356810 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
251
               

               
Alignm identity:
               
176
               

               
Alignm E-value:
               
2e-34
               

               
Alignm gaps (pig, cow):
               
136, 76
               

               
Conread position:
               
258-514
               

               
Cow position:
               
chr1:22630759-22630500 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
260
               

               
Alignm identity:
               
180
               

               
Alignm E-value:
               
3e-35
               

               
Alignm gaps (pig, cow):
               
118, 0
               

               
Conread position:
               
258-523
               

               
Cow position:
               
chr1:40265234-40265501 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
268
               

               
Alignm identity:
               
190
               

               
Alignm E-value:
               
6.00036e-42
               

               
Alignm gaps (pig, cow):
               
118, 0
               

               
Conread position:
               
258-525
               

               
Cow position:
               
chr1:24410993-24411263 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
271
               

               
Alignm identity:
               
190
               

               
Alignm E-value:
               
5e-40
               

               
Alignm gaps (pig, cow):
               
136, 0
               

               
Conread position:
               
258-530
               

               
Cow position:
               
chr1:49600907-49601190 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
284
               

               
Alignm identity:
               
198
               

               
Alignm E-value:
               
1e-36
               

               
Alignm gaps (pig, cow):
               
136, 0
               

               
Conread position:
               
258-551
               

               
Cow position:
               
chr1:70466480-70466185 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
297
               

               
Alignm identity:
               
208
               

               
Alignm E-value:
               
2.00386e-43
               

               
Alignm gaps (pig, cow):
               
128, 170
               

               
Conread position:
               
258-564
               

               
Cow position:
               
chr1:85151279-85151578 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
310
               

               
Alignm identity:
               
222
               

               
Alignm E-value:
               
8.40779e-45
               

               
Alignm gaps (pig, cow):
               
132, 52
               

               
Conread position:
               
258-567
               

               
Cow position:
               
chr1:37694579-37694886 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
314
               

               
Alignm identity:
               
229
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
102, 68
               

               
Conread position:
               
258-582
               

               
Cow position:
               
chr1:41486779-41486454 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
329
               

               
Alignm identity:
               
236
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
136, 183
               

               
Conread position:
               
258-582
               

               
Cow position:
               
chr1:87457271-87456946 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
329
               

               
Alignm identity:
               
234
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
118, 184
               

               
Conread position:
               
258-597
               

               
Cow position:
               
chr1:91674398-91674058 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
343
               

               
Alignm identity:
               
244
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
136, 297
               

               
Conread position:
               
258-598
               

               
Cow position:
               
chr1:4562901-4563242 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
344
               

               
Alignm identity:
               
248
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
136, 297
               

               
Conread position:
               
258-598
               

               
Cow position:
               
chr1:44818639-44818978 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
344
               

               
Alignm identity:
               
238
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
136, 148
               

               
Conread position:
               
258-598
               

               
Cow position:
               
chr1:72962927-72963268 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
344
               

               
Alignm identity:
               
244
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
136, 297
               

               
Conread position:
               
258-598
               

               
Cow position:
               
chr1:83059475-83059815 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
343
               

               
Alignm identity:
               
250
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
124, 296
               

               
Conread position:
               
258-600
               

               
Cow position:
               
chr1:31817002-31817345 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
346
               

               
Alignm identity:
               
238
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
136, 297
               

               
Conread position:
               
258-601
               

               
Cow position:
               
chr1:82502764-82502424 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
347
               

               
Alignm identity:
               
247
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
118, 73
               

               
Conread position:
               
258-603
               

               
Cow position:
               
chr1:22262276-22261931 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
349
               

               
Alignm identity:
               
242
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
136, 297
               

               
Conread position:
               
258-606
               

               
Cow position:
               
chr1:68717076-68717422 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
352
               

               
Alignm identity:
               
253
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
118, 190
               

               
Conread position:
               
258-607
               

               
Cow position:
               
chr1:91799085-91799428 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
352
               

               
Alignm identity:
               
249
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
79, 93
               

               
Conread position:
               
258-608
               

               
Cow position:
               
chr1:2219045-2219395 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
354
               

               
Alignm identity:
               
250
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
47, 53
               

               
Conread position:
               
258-608
               

               
Cow position:
               
chr1:3969118-3969469 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
354
               

               
Alignm identity:
               
249
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
136, 297
               

               
Conread position:
               
258-608
               

               
Cow position:
               
chr1:8744330-8744680 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
354
               

               
Alignm identity:
               
245
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
136, 285
               

               
Conread position:
               
258-608
               

               
Cow position:
               
chr1:10070940-10071291 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
354
               

               
Alignm identity:
               
252
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
118, 286
               

               
Conread position:
               
258-608
               

               
Cow position:
               
chr1:17247495-17247846 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
355
               

               
Alignm identity:
               
252
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
136, 184
               

               
Conread position:
               
258-608
               

               
Cow position:
               
chr1:17937589-17937936 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
354
               

               
Alignm identity:
               
249
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
118, 57
               

               
Conread position:
               
258-608
               

               
Cow position:
               
chr1:19057034-19056685 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
352
               

               
Alignm identity:
               
243
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
185, 295
               

               
Conread position:
               
258-608
               

               
Cow position:
               
chr1:19235331-19235679 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
354
               

               
Alignm identity:
               
253
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
118, 159
               

               
Conread position:
               
258-608
               

               
Cow position:
               
chr1:26721160-26721511 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
354
               

               
Alignm identity:
               
249
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
136, 297
               

               
Conread position:
               
258-608
               

               
Cow position:
               
chr1:27308893-27309243 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
355
               

               
Alignm identity:
               
247
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
43, 53
               

               
Conread position:
               
258-608
               

               
Cow position:
               
chr1:32796337-32795996 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
352
               

               
Alignm identity:
               
252
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
189, 97
               

               
Conread position:
               
258-608
               

               
Cow position:
               
chr1:33464104-33464455 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
354
               

               
Alignm identity:
               
252
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
118, 297
               

               
Conread position:
               
258-608
               

               
Cow position:
               
chr1:39890521-39890172 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
354
               

               
Alignm identity:
               
250
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
118, 148
               

               
Conread position:
               
258-608
               

               
Cow position:
               
chr1:47078014-47078365 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
354
               

               
Alignm identity:
               
248
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
136, 297
               

               
Conread position:
               
258-608
               

               
Cow position:
               
chr1:47922700-47923051 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
354
               

               
Alignm identity:
               
254
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
136, 297
               

               
Conread position:
               
258-608
               

               
Cow position:
               
chr1:52379140-52378789 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
354
               

               
Alignm identity:
               
248
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
136, 297
               

               
Conread position:
               
258-608
               

               
Cow position:
               
chr1:56412206-56411857 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
353
               

               
Alignm identity:
               
242
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
111, 271
               

               
Conread position:
               
258-608
               

               
Cow position:
               
chr1:56720333-56720684 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
354
               

               
Alignm identity:
               
258
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
136, 297
               

               
Conread position:
               
258-608
               

               
Cow position:
               
chr1:62711020-62711373 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
356
               

               
Alignm identity:
               
246
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
118, 288
               

               
Conread position:
               
258-608
               

               
Cow position:
               
chr1:72463049-72462694 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
358
               

               
Alignm identity:
               
259
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
50, 288
               

               
Conread position:
               
258-608
               

               
Cow position:
               
chr1:75404063-75403712 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
354
               

               
Alignm identity:
               
252
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
136, 286
               

               
Conread position:
               
258-608
               

               
Cow position:
               
chr1:77553024-77553376 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
355
               

               
Alignm identity:
               
244
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
118, 282
               

               
Conread position:
               
258-608
               

               
Cow position:
               
chr1:77841452-77841101 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
354
               

               
Alignm identity:
               
248
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
135, 297
               

               
Conread position:
               
258-608
               

               
Cow position:
               
chr1:82162024-82162374 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
353
               

               
Alignm identity:
               
253
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
118, 288
               

               
Conread position:
               
258-608
               

               
Cow position:
               
chr1:82481953-82482304 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
355
               

               
Alignm identity:
               
260
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
40, 45
               

               
Conread position:
               
258-608
               

               
Cow position:
               
chr1:85413441-85413099 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
352
               

               
Alignm identity:
               
243
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
118, 184
               

               
Conread position:
               
258-608
               

               
Cow position:
               
chr1:86371870-86372221 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
354
               

               
Alignm identity:
               
252
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
118, 297
               

               
Conread position:
               
258-608
               

               
Cow position:
               
chr1:90604677-90605027 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
354
               

               
Alignm identity:
               
253
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
118, 303
               

               
Conread position:
               
258-608
               

               
Cow position:
               
chr1:97250828-97251178 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
354
               

               
Alignm identity:
               
245
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
136, 156
               

               
Conread position:
               
259-495
               

               
Cow position:
               
chr1:75093400-75093161 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
240
               

               
Alignm identity:
               
174
               

               
Alignm E-value:
               
4e-39
               

               
Alignm gaps (pig, cow):
               
117, 0
               

               
Conread position:
               
259-530
               

               
Cow position:
               
chr1:64928700-64928974 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
276
               

               
Alignm identity:
               
201
               

               
Alignm E-value:
               
1.4013e-45
               

               
Alignm gaps (pig, cow):
               
117, 11
               

               
Conread position:
               
260-394
               

               
Cow position:
               
chr1:65638109-65637973 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
137
               

               
Alignm identity:
               
105
               

               
Alignm E-value:
               
8e-24
               

               
Alignm gaps (pig, cow):
               
125, 0
               

               
Conread position:
               
260-421
               

               
Cow position:
               
chr1:79165185-79165350 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
166
               

               
Alignm identity:
               
127
               

               
Alignm E-value:
               
1e-29
               

               
Alignm gaps (pig, cow):
               
74, 0
               

               
Conread position:
               
260-423
               

               
Cow position:
               
chr1:51628595-51628762 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
168
               

               
Alignm identity:
               
124
               

               
Alignm E-value:
               
3e-25
               

               
Alignm gaps (pig, cow):
               
11, 0
               

               
Conread position:
               
260-440
               

               
Cow position:
               
chr1:42968411-42968591 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
185
               

               
Alignm identity:
               
139
               

               
Alignm E-value:
               
4e-28
               

               
Alignm gaps (pig, cow):
               
6, 145
               

               
Conread position:
               
260-445
               

               
Cow position:
               
chr1:27358850-27358659 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
192
               

               
Alignm identity:
               
137
               

               
Alignm E-value:
               
9e-25
               

               
Alignm gaps (pig, cow):
               
11, 0
               

               
Conread position:
               
260-463
               

               
Cow position:
               
chr1:33811829-33811633 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
207
               

               
Alignm identity:
               
153
               

               
Alignm E-value:
               
1e-29
               

               
Alignm gaps (pig, cow):
               
130, 10
               

               
Conread position:
               
260-467
               

               
Cow position:
               
chr1:71257578-71257788 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
211
               

               
Alignm identity:
               
151
               

               
Alignm E-value:
               
2e-31
               

               
Alignm gaps (pig, cow):
               
125, 0
               

               
Conread position:
               
260-479
               

               
Cow position:
               
chr1:21060620-21060398 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
223
               

               
Alignm identity:
               
154
               

               
Alignm E-value:
               
1e-28
               

               
Alignm gaps (pig, cow):
               
134, 0
               

               
Conread position:
               
260-501
               

               
Cow position:
               
chr1:95215281-95215515 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
245
               

               
Alignm identity:
               
185
               

               
Alignm E-value:
               
5e-40
               

               
Alignm gaps (pig, cow):
               
130, 156
               

               
Conread position:
               
260-545
               

               
Cow position:
               
chr1:91816868-91817154 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
290
               

               
Alignm identity:
               
223
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
14, 162
               

               
Conread position:
               
260-582
               

               
Cow position:
               
chr1:72035025-72035347 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
326
               

               
Alignm identity:
               
251
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
130, 103
               

               
Conread position:
               
260-601
               

               
Cow position:
               
chr1:1802040-1801711 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
343
               

               
Alignm identity:
               
249
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
186, 47
               

               
Conread position:
               
260-607
               

               
Cow position:
               
chr1:19357589-19357240 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
352
               

               
Alignm identity:
               
252
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
13, 296
               

               
Conread position:
               
260-608
               

               
Cow position:
               
chr1:40122407-40122057 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
353
               

               
Alignm identity:
               
242
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
116, 299
               

               
Conread position:
               
260-608
               

               
Cow position:
               
chr1:54199482-54199823 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
351
               

               
Alignm identity:
               
266
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
14, 56
               

               
Conread position:
               
260-608
               

               
Cow position:
               
chr1:58419837-58419481 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
360
               

               
Alignm identity:
               
263
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
123, 283
               

               
Conread position:
               
260-608
               

               
Cow position:
               
chr1:67577969-67577633 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
354
               

               
Alignm identity:
               
266
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
133, 41
               

               
Conread position:
               
260-608
               

               
Cow position:
               
chr1:74940100-74939761 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
349
               

               
Alignm identity:
               
233
               

               
Alignm E-value:
               
2e-40
               

               
Alignm gaps (pig, cow):
               
181, 0
               

               
Conread position:
               
260-608
               

               
Cow position:
               
chr1:79591007-79590654 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
356
               

               
Alignm identity:
               
271
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
14, 289
               

               
Conread position:
               
260-608
               

               
Cow position:
               
chr1:92370455-92370805 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
356
               

               
Alignm identity:
               
265
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
14, 105
               

               
Conread position:
               
260-608
               

               
Cow position:
               
chr1:101973043-101973394 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
355
               

               
Alignm identity:
               
248
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
116, 282
               

               
Conread position:
               
261-414
               

               
Cow position:
               
chr1:52994926-52994773 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
155
               

               
Alignm identity:
               
118
               

               
Alignm E-value:
               
4e-27
               

               
Alignm gaps (pig, cow):
               
129, 9
               

               
Conread position:
               
261-460
               

               
Cow position:
               
chr1:20714402-20714604 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
203
               

               
Alignm identity:
               
137
               

               
Alignm E-value:
               
6e-22
               

               
Alignm gaps (pig, cow):
               
133, 0
               

               
Conread position:
               
261-462
               

               
Cow position:
               
chr1:1760348-1760144 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
205
               

               
Alignm identity:
               
145
               

               
Alignm E-value:
               
4e-28
               

               
Alignm gaps (pig, cow):
               
115, 0
               

               
Conread position:
               
261-467
               

               
Cow position:
               
chr1:21339254-21339463 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
210
               

               
Alignm identity:
               
142
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
133, 0
               

               
Conread position:
               
261-468
               

               
Cow position:
               
chr1:57577632-57577422 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
211
               

               
Alignm identity:
               
144
               

               
Alignm E-value:
               
9e-25
               

               
Alignm gaps (pig, cow):
               
133, 0
               

               
Conread position:
               
261-474
               

               
Cow position:
               
chr1:5301264-5301048 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
217
               

               
Alignm identity:
               
147
               

               
Alignm E-value:
               
9e-25
               

               
Alignm gaps (pig, cow):
               
133, 0
               

               
Conread position:
               
261-477
               

               
Cow position:
               
chr1:22143186-22142967 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
220
               

               
Alignm identity:
               
152
               

               
Alignm E-value:
               
4e-28
               

               
Alignm gaps (pig, cow):
               
133, 0
               

               
Conread position:
               
261-478
               

               
Cow position:
               
chr1:28275139-28274919 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
221
               

               
Alignm identity:
               
153
               

               
Alignm E-value:
               
4e-28
               

               
Alignm gaps (pig, cow):
               
115, 0
               

               
Conread position:
               
261-478
               

               
Cow position:
               
chr1:51454204-51453983 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
222
               

               
Alignm identity:
               
154
               

               
Alignm E-value:
               
1e-27
               

               
Alignm gaps (pig, cow):
               
113, 0
               

               
Conread position:
               
261-481
               

               
Cow position:
               
chr1:16013476-16013251 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
226
               

               
Alignm identity:
               
155
               

               
Alignm E-value:
               
1e-26
               

               
Alignm gaps (pig, cow):
               
133, 0
               

               
Conread position:
               
261-483
               

               
Cow position:
               
chr1:99101006-99100781 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
226
               

               
Alignm identity:
               
158
               

               
Alignm E-value:
               
5e-31
               

               
Alignm gaps (pig, cow):
               
133, 0
               

               
Conread position:
               
261-486
               

               
Cow position:
               
chr1:72737215-72737443 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
229
               

               
Alignm identity:
               
159
               

               
Alignm E-value:
               
5e-30
               

               
Alignm gaps (pig, cow):
               
115, 0
               

               
Conread position:
               
261-487
               

               
Cow position:
               
chr1:8856890-8857119 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
230
               

               
Alignm identity:
               
159
               

               
Alignm E-value:
               
5e-30
               

               
Alignm gaps (pig, cow):
               
133, 0
               

               
Conread position:
               
261-496
               

               
Cow position:
               
chr1:26789906-26789668 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
239
               

               
Alignm identity:
               
167
               

               
Alignm E-value:
               
2e-33
               

               
Alignm gaps (pig, cow):
               
133, 0
               

               
Conread position:
               
261-498
               

               
Cow position:
               
chr1:91084759-91084999 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
241
               

               
Alignm identity:
               
169
               

               
Alignm E-value:
               
2e-34
               

               
Alignm gaps (pig, cow):
               
133, 0
               

               
Conread position:
               
261-500
               

               
Cow position:
               
chr1:40048349-40048106 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
244
               

               
Alignm identity:
               
169
               

               
Alignm E-value:
               
6e-32
               

               
Alignm gaps (pig, cow):
               
133, 0
               

               
Conread position:
               
261-500
               

               
Cow position:
               
chr1:75935315-75935557 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
243
               

               
Alignm identity:
               
168
               

               
Alignm E-value:
               
2e-32
               

               
Alignm gaps (pig, cow):
               
133, 0
               

               
Conread position:
               
261-501
               

               
Cow position:
               
chr1:21038015-21037772 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
244
               

               
Alignm identity:
               
172
               

               
Alignm E-value:
               
9e-36
               

               
Alignm gaps (pig, cow):
               
133, 0
               

               
Conread position:
               
261-509
               

               
Cow position:
               
chr1:1263296-1263046 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
252
               

               
Alignm identity:
               
180
               

               
Alignm E-value:
               
1e-38
               

               
Alignm gaps (pig, cow):
               
133, 246
               

               
Conread position:
               
261-510
               

               
Cow position:
               
chr1:52850450-52850199 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
253
               

               
Alignm identity:
               
171
               

               
Alignm E-value:
               
1e-29
               

               
Alignm gaps (pig, cow):
               
133, 244
               

               
Conread position:
               
261-513
               

               
Cow position:
               
chr1:15179084-15178833 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
256
               

               
Alignm identity:
               
180
               

               
Alignm E-value:
               
8e-35
               

               
Alignm gaps (pig, cow):
               
115, 202
               

               
Conread position:
               
261-513
               

               
Cow position:
               
chr1:95712362-95712617 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
256
               

               
Alignm identity:
               
181
               

               
Alignm E-value:
               
1e-38
               

               
Alignm gaps (pig, cow):
               
133, 0
               

               
Conread position:
               
261-514
               

               
Cow position:
               
chr1:80011128-80010872 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
257
               

               
Alignm identity:
               
182
               

               
Alignm E-value:
               
4e-39
               

               
Alignm gaps (pig, cow):
               
133, 0
               

               
Conread position:
               
261-515
               

               
Cow position:
               
chr1:58386283-58386026 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
258
               

               
Alignm identity:
               
184
               

               
Alignm E-value:
               
2e-40
               

               
Alignm gaps (pig, cow):
               
133, 0
               

               
Conread position:
               
261-522
               

               
Cow position:
               
chr1:20847523-20847260 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
265
               

               
Alignm identity:
               
184
               

               
Alignm E-value:
               
3e-36
               

               
Alignm gaps (pig, cow):
               
133, 160
               

               
Conread position:
               
261-527
               

               
Cow position:
               
chr1:8884727-8884456 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
272
               

               
Alignm identity:
               
187
               

               
Alignm E-value:
               
3e-35
               

               
Alignm gaps (pig, cow):
               
133, 0
               

               
Conread position:
               
261-530
               

               
Cow position:
               
chr1:24737102-24737374 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
274
               

               
Alignm identity:
               
194
               

               
Alignm E-value:
               
2e-40
               

               
Alignm gaps (pig, cow):
               
133, 180
               

               
Conread position:
               
261-530
               

               
Cow position:
               
chr1:48638774-48639046 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
273
               

               
Alignm identity:
               
187
               

               
Alignm E-value:
               
9e-36
               

               
Alignm gaps (pig, cow):
               
115, 0
               

               
Conread position:
               
261-530
               

               
Cow position:
               
chr1:77223301-77223029 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
273
               

               
Alignm identity:
               
192
               

               
Alignm E-value:
               
4.99997e-41
               

               
Alignm gaps (pig, cow):
               
133, 0
               

               
Conread position:
               
261-539
               

               
Cow position:
               
chr1:61639074-61638793 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
282
               

               
Alignm identity:
               
200
               

               
Alignm E-value:
               
7.00649e-44
               

               
Alignm gaps (pig, cow):
               
115, 0
               

               
Conread position:
               
261-541
               

               
Cow position:
               
chr1:66909732-66909449 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
284
               

               
Alignm identity:
               
199
               

               
Alignm E-value:
               
6.00036e-42
               

               
Alignm gaps (pig, cow):
               
115, 0
               

               
Conread position:
               
261-542
               

               
Cow position:
               
chr1:56692419-56692703 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
285
               

               
Alignm identity:
               
201
               

               
Alignm E-value:
               
7.00649e-44
               

               
Alignm gaps (pig, cow):
               
133, 0
               

               
Conread position:
               
261-544
               

               
Cow position:
               
chr1:69902779-69903065 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
287
               

               
Alignm identity:
               
201
               

               
Alignm E-value:
               
5.99756e-43
               

               
Alignm gaps (pig, cow):
               
133, 0
               

               
Conread position:
               
261-546
               

               
Cow position:
               
chr1:60665397-60665109 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
290
               

               
Alignm identity:
               
216
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
123, 220
               

               
Conread position:
               
261-546
               

               
Cow position:
               
chr1:73564395-73564683 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
289
               

               
Alignm identity:
               
207
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
133, 0
               

               
Conread position:
               
261-546
               

               
Cow position:
               
chr1:94962179-94962467 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
289
               

               
Alignm identity:
               
204
               

               
Alignm E-value:
               
8.40779e-45
               

               
Alignm gaps (pig, cow):
               
133, 0
               

               
Conread position:
               
261-546
               

               
Cow position:
               
chr1:97512820-97512532 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
289
               

               
Alignm identity:
               
209
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
133, 0
               

               
Conread position:
               
261-563
               

               
Cow position:
               
chr1:18638276-18637973 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
306
               

               
Alignm identity:
               
212
               

               
Alignm E-value:
               
5.99756e-43
               

               
Alignm gaps (pig, cow):
               
133, 294
               

               
Conread position:
               
261-563
               

               
Cow position:
               
chr1:79554728-79554418 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
313
               

               
Alignm identity:
               
218
               

               
Alignm E-value:
               
2e-40
               

               
Alignm gaps (pig, cow):
               
133, 301
               

               
Conread position:
               
261-569
               

               
Cow position:
               
chr1:76478834-76478525 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
312
               

               
Alignm identity:
               
219
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
133, 294
               

               
Conread position:
               
261-572
               

               
Cow position:
               
chr1:57534058-57533746 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
315
               

               
Alignm identity:
               
225
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
133, 294
               

               
Conread position:
               
261-573
               

               
Cow position:
               
chr1:15476716-15477029 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
316
               

               
Alignm identity:
               
224
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
133, 294
               

               
Conread position:
               
261-573
               

               
Cow position:
               
chr1:54174843-54174530 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
316
               

               
Alignm identity:
               
226
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
133, 294
               

               
Conread position:
               
261-573
               

               
Cow position:
               
chr1:59790208-59790521 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
316
               

               
Alignm identity:
               
223
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
133, 283
               

               
Conread position:
               
261-575
               

               
Cow position:
               
chr1:17286507-17286822 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
318
               

               
Alignm identity:
               
219
               

               
Alignm E-value:
               
7.00649e-44
               

               
Alignm gaps (pig, cow):
               
133, 294
               

               
Conread position:
               
261-575
               

               
Cow position:
               
chr1:20389331-20389016 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
318
               

               
Alignm identity:
               
223
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
133, 294
               

               
Conread position:
               
261-575
               

               
Cow position:
               
chr1:52941068-52941379 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
317
               

               
Alignm identity:
               
223
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
133, 182
               

               
Conread position:
               
261-576
               

               
Cow position:
               
chr1:69019515-69019831 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
319
               

               
Alignm identity:
               
218
               

               
Alignm E-value:
               
6.00036e-42
               

               
Alignm gaps (pig, cow):
               
133, 265
               

               
Conread position:
               
261-578
               

               
Cow position:
               
chr1:50357808-50358125 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
321
               

               
Alignm identity:
               
226
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
133, 211
               

               
Conread position:
               
261-580
               

               
Cow position:
               
chr1:81669982-81670303 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
324
               

               
Alignm identity:
               
230
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
115, 295
               

               
Conread position:
               
261-581
               

               
Cow position:
               
chr1:79015554-79015233 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
324
               

               
Alignm identity:
               
228
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
133, 294
               

               
Conread position:
               
261-582
               

               
Cow position:
               
chr1:83946114-83946436 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
325
               

               
Alignm identity:
               
232
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
133, 294
               

               
Conread position:
               
261-585
               

               
Cow position:
               
chr1:90132532-90132857 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
328
               

               
Alignm identity:
               
229
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
133, 294
               

               
Conread position:
               
261-587
               

               
Cow position:
               
chr1:34198112-34197785 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
330
               

               
Alignm identity:
               
236
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
133, 294
               

               
Conread position:
               
261-587
               

               
Cow position:
               
chr1:89435163-89435490 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
331
               

               
Alignm identity:
               
237
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
133, 181
               

               
Conread position:
               
261-587
               

               
Cow position:
               
chr1:95344298-95344614 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
329
               

               
Alignm identity:
               
236
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
82, 73
               

               
Conread position:
               
261-588
               

               
Cow position:
               
chr1:57615656-57615328 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
331
               

               
Alignm identity:
               
237
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
133, 294
               

               
Conread position:
               
261-593
               

               
Cow position:
               
chr1:73464500-73464167 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
336
               

               
Alignm identity:
               
234
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
115, 283
               

               
Conread position:
               
261-594
               

               
Cow position:
               
chr1:68087770-68087436 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
337
               

               
Alignm identity:
               
236
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
133, 294
               

               
Conread position:
               
261-595
               

               
Cow position:
               
chr1:20528529-20528192 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
338
               

               
Alignm identity:
               
201
               

               
Alignm E-value:
               
1.99965e-42
               

               
Alignm gaps (pig, cow):
               
133, 0
               

               
Conread position:
               
261-598
               

               
Cow position:
               
chr1:7325202-7324864 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
341
               

               
Alignm identity:
               
246
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
133, 294
               

               
Conread position:
               
261-598
               

               
Cow position:
               
chr1:7867937-7867599 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
341
               

               
Alignm identity:
               
242
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
133, 294
               

               
Conread position:
               
261-598
               

               
Cow position:
               
chr1:12607589-12607924 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
341
               

               
Alignm identity:
               
239
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
133, 239
               

               
Conread position:
               
261-598
               

               
Cow position:
               
chr1:66368230-66368568 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
341
               

               
Alignm identity:
               
244
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
133, 294
               

               
Conread position:
               
261-598
               

               
Cow position:
               
chr1:79916514-79916854 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
343
               

               
Alignm identity:
               
241
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
133, 296
               

               
Conread position:
               
261-598
               

               
Cow position:
               
chr1:91733785-91733447 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
341
               

               
Alignm identity:
               
240
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
115, 294
               

               
Conread position:
               
261-599
               

               
Cow position:
               
chr1:34406696-34406357 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
342
               

               
Alignm identity:
               
246
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
115, 294
               

               
Conread position:
               
261-599
               

               
Cow position:
               
chr1:36929922-36930261 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
343
               

               
Alignm identity:
               
234
               

               
Alignm E-value:
               
1.96182e-44
               

               
Alignm gaps (pig, cow):
               
133, 180
               

               
Conread position:
               
261-601
               

               
Cow position:
               
chr1:64778588-64778247 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
344
               

               
Alignm identity:
               
243
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
133, 294
               

               
Conread position:
               
261-607
               

               
Cow position:
               
chr1:6656925-6657275 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
353
               

               
Alignm identity:
               
247
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
115, 297
               

               
Conread position:
               
261-607
               

               
Cow position:
               
chr1:13439452-13439109 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
350
               

               
Alignm identity:
               
241
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
133, 227
               

               
Conread position:
               
261-607
               

               
Cow position:
               
chr1:16820771-16820424 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
350
               

               
Alignm identity:
               
248
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
133, 294
               

               
Conread position:
               
261-607
               

               
Cow position:
               
chr1:34875140-34874793 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
350
               

               
Alignm identity:
               
251
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
115, 294
               

               
Conread position:
               
261-607
               

               
Cow position:
               
chr1:59201422-59201768 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
350
               

               
Alignm identity:
               
246
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
133, 91
               

               
Conread position:
               
261-607
               

               
Cow position:
               
chr1:67717168-67717515 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
350
               

               
Alignm identity:
               
249
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
133, 294
               

               
Conread position:
               
261-607
               

               
Cow position:
               
chr1:68280312-68279965 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
350
               

               
Alignm identity:
               
250
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
133, 294
               

               
Conread position:
               
261-607
               

               
Cow position:
               
chr1:72625018-72624668 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
353
               

               
Alignm identity:
               
249
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
133, 297
               

               
Conread position:
               
261-607
               

               
Cow position:
               
chr1:72805853-72806200 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
350
               

               
Alignm identity:
               
249
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
115, 294
               

               
Conread position:
               
261-607
               

               
Cow position:
               
chr1:73432967-73433313 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
350
               

               
Alignm identity:
               
241
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
133, 294
               

               
Conread position:
               
261-607
               

               
Cow position:
               
chr1:98353230-98353577 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
350
               

               
Alignm identity:
               
244
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
133, 297
               

               
Conread position:
               
261-608
               

               
Cow position:
               
chr1:476043-475695 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
351
               

               
Alignm identity:
               
250
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
133, 294
               

               
Conread position:
               
261-608
               

               
Cow position:
               
chr1:1022903-1023251 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
351
               

               
Alignm identity:
               
249
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
133, 294
               

               
Conread position:
               
261-608
               

               
Cow position:
               
chr1:1028532-1028184 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
351
               

               
Alignm identity:
               
247
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
133, 294
               

               
Conread position:
               
261-608
               

               
Cow position:
               
chr1:1382711-1383056 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
349
               

               
Alignm identity:
               
246
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
186, 117
               

               
Conread position:
               
261-608
               

               
Cow position:
               
chr1:3931475-3931823 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
351
               

               
Alignm identity:
               
250
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
133, 294
               

               
Conread position:
               
261-608
               

               
Cow position:
               
chr1:7712934-7712590 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
349
               

               
Alignm identity:
               
245
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
186, 117
               

               
Conread position:
               
261-608
               

               
Cow position:
               
chr1:8513103-8513450 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
351
               

               
Alignm identity:
               
251
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
133, 274
               

               
Conread position:
               
261-608
               

               
Cow position:
               
chr1:8845783-8845434 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
351
               

               
Alignm identity:
               
248
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
133, 288
               

               
Conread position:
               
261-608
               

               
Cow position:
               
chr1:10120119-10119771 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
351
               

               
Alignm identity:
               
249
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
133, 294
               

               
Conread position:
               
261-608
               

               
Cow position:
               
chr1:10624856-10624508 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
351
               

               
Alignm identity:
               
245
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
133, 294
               

               
Conread position:
               
261-608
               

               
Cow position:
               
chr1:11665376-11665724 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
351
               

               
Alignm identity:
               
248
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
133, 294
               

               
Conread position:
               
261-608
               

               
Cow position:
               
chr1:13150706-13150359 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
351
               

               
Alignm identity:
               
249
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
133, 279
               

               
Conread position:
               
261-608
               

               
Cow position:
               
chr1:13298698-13298351 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
351
               

               
Alignm identity:
               
250
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
133, 253
               

               
Conread position:
               
261-608
               

               
Cow position:
               
chr1:16373213-16372865 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
351
               

               
Alignm identity:
               
248
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
133, 294
               

               
Conread position:
               
261-608
               

               
Cow position:
               
chr1:17058006-17058354 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
351
               

               
Alignm identity:
               
248
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
133, 283
               

               
Conread position:
               
261-608
               

               
Cow position:
               
chr1:19776700-19776341 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
362
               

               
Alignm identity:
               
252
               

               
Alignm E-value:
               
1.4013e-45
               

               
Alignm gaps (pig, cow):
               
101, 305
               

               
Conread position:
               
261-608
               

               
Cow position:
               
chr1:20833044-20832696 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
351
               

               
Alignm identity:
               
251
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
133, 283
               

               
Conread position:
               
261-608
               

               
Cow position:
               
chr1:20845847-20846195 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
351
               

               
Alignm identity:
               
246
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
133, 294
               

               
Conread position:
               
261-608
               

               
Cow position:
               
chr1:21079275-21079623 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
351
               

               
Alignm identity:
               
247
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
108, 294
               

               
Conread position:
               
261-608
               

               
Cow position:
               
chr1:22546977-22546629 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
351
               

               
Alignm identity:
               
246
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
133, 294
               

               
Conread position:
               
261-608
               

               
Cow position:
               
chr1:23920429-23920081 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
351
               

               
Alignm identity:
               
245
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
133, 294
               

               
Conread position:
               
261-608
               

               
Cow position:
               
chr1:30312592-30312244 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
351
               

               
Alignm identity:
               
251
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
133, 294
               

               
Conread position:
               
261-608
               

               
Cow position:
               
chr1:31341150-31341499 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
351
               

               
Alignm identity:
               
257
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
129, 291
               

               
Conread position:
               
261-608
               

               
Cow position:
               
chr1:31405916-31405568 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
351
               

               
Alignm identity:
               
255
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
133, 294
               

               
Conread position:
               
261-608
               

               
Cow position:
               
chr1:31714546-31714894 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
351
               

               
Alignm identity:
               
249
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
133, 294
               

               
Conread position:
               
261-608
               

               
Cow position:
               
chr1:32960041-32960389 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
351
               

               
Alignm identity:
               
247
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
119, 294
               

               
Conread position:
               
261-608
               

               
Cow position:
               
chr1:33366100-33365747 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
356
               

               
Alignm identity:
               
249
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
133, 288
               

               
Conread position:
               
261-608
               

               
Cow position:
               
chr1:34534406-34534058 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
351
               

               
Alignm identity:
               
249
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
133, 283
               

               
Conread position:
               
261-608
               

               
Cow position:
               
chr1:34821095-34820747 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
351
               

               
Alignm identity:
               
247
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
133, 294
               

               
Conread position:
               
261-608
               

               
Cow position:
               
chr1:35147376-35147724 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
351
               

               
Alignm identity:
               
247
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
133, 294
               

               
Conread position:
               
261-608
               

               
Cow position:
               
chr1:35597650-35597994 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
353
               

               
Alignm identity:
               
247
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
133, 180
               

               
Conread position:
               
261-608
               

               
Cow position:
               
chr1:36706273-36706621 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
351
               

               
Alignm identity:
               
246
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
133, 294
               

               
Conread position:
               
261-608
               

               
Cow position:
               
chr1:37243538-37243886 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
351
               

               
Alignm identity:
               
250
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
133, 294
               

               
Conread position:
               
261-608
               

               
Cow position:
               
chr1:39160507-39160855 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
351
               

               
Alignm identity:
               
250
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
133, 294
               

               
Conread position:
               
261-608
               

               
Cow position:
               
chr1:46121721-46122069 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
351
               

               
Alignm identity:
               
250
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
133, 294
               

               
Conread position:
               
261-608
               

               
Cow position:
               
chr1:47418610-47418262 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
351
               

               
Alignm identity:
               
245
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
133, 294
               

               
Conread position:
               
261-608
               

               
Cow position:
               
chr1:48736099-48735751 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
351
               

               
Alignm identity:
               
252
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
133, 294
               

               
Conread position:
               
261-608
               

               
Cow position:
               
chr1:49269045-49268697 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
351
               

               
Alignm identity:
               
247
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
133, 294
               

               
Conread position:
               
261-608
               

               
Cow position:
               
chr1:50687888-50687540 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
351
               

               
Alignm identity:
               
249
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
133, 294
               

               
Conread position:
               
261-608
               

               
Cow position:
               
chr1:51732163-51732511 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
351
               

               
Alignm identity:
               
252
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
133, 294
               

               
Conread position:
               
261-608
               

               
Cow position:
               
chr1:52068678-52068330 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
351
               

               
Alignm identity:
               
250
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
133, 294
               

               
Conread position:
               
261-608
               

               
Cow position:
               
chr1:52381607-52381261 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
351
               

               
Alignm identity:
               
243
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
133, 269
               

               
Conread position:
               
261-608
               

               
Cow position:
               
chr1:55292478-55292826 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
351
               

               
Alignm identity:
               
250
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
133, 294
               

               
Conread position:
               
261-608
               

               
Cow position:
               
chr1:57272741-57272393 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
351
               

               
Alignm identity:
               
251
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
115, 294
               

               
Conread position:
               
261-608
               

               
Cow position:
               
chr1:57538514-57538166 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
351
               

               
Alignm identity:
               
248
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
133, 294
               

               
Conread position:
               
261-608
               

               
Cow position:
               
chr1:57760261-57759914 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
350
               

               
Alignm identity:
               
259
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
131, 293
               

               
Conread position:
               
261-608
               

               
Cow position:
               
chr1:60114934-60114586 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
351
               

               
Alignm identity:
               
251
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
129, 294
               

               
Conread position:
               
261-608
               

               
Cow position:
               
chr1:62529619-62529967 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
351
               

               
Alignm identity:
               
249
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
133, 294
               

               
Conread position:
               
261-608
               

               
Cow position:
               
chr1:62530717-62530369 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
351
               

               
Alignm identity:
               
246
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
133, 294
               

               
Conread position:
               
261-608
               

               
Cow position:
               
chr1:63340309-63340656 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
351
               

               
Alignm identity:
               
249
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
133, 229
               

               
Conread position:
               
261-608
               

               
Cow position:
               
chr1:63582949-63583297 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
351
               

               
Alignm identity:
               
247
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
133, 294
               

               
Conread position:
               
261-608
               

               
Cow position:
               
chr1:64817986-64818334 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
351
               

               
Alignm identity:
               
245
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
133, 283
               

               
Conread position:
               
261-608
               

               
Cow position:
               
chr1:65481117-65480769 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
351
               

               
Alignm identity:
               
257
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
133, 294
               

               
Conread position:
               
261-608
               

               
Cow position:
               
chr1:67830968-67831317 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
352
               

               
Alignm identity:
               
247
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
133, 295
               

               
Conread position:
               
261-608
               

               
Cow position:
               
chr1:68052322-68052670 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
351
               

               
Alignm identity:
               
248
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
133, 294
               

               
Conread position:
               
261-608
               

               
Cow position:
               
chr1:68096991-68097339 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
351
               

               
Alignm identity:
               
250
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
115, 294
               

               
Conread position:
               
261-608
               

               
Cow position:
               
chr1:68820960-68821308 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
351
               

               
Alignm identity:
               
247
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
133, 294
               

               
Conread position:
               
261-608
               

               
Cow position:
               
chr1:69513265-69513613 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
351
               

               
Alignm identity:
               
245
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
133, 294
               

               
Conread position:
               
261-608
               

               
Cow position:
               
chr1:69872339-69872687 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
351
               

               
Alignm identity:
               
249
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
133, 294
               

               
Conread position:
               
261-608
               

               
Cow position:
               
chr1:70533248-70532900 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
351
               

               
Alignm identity:
               
247
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
133, 294
               

               
Conread position:
               
261-608
               

               
Cow position:
               
chr1:70897908-70897560 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
351
               

               
Alignm identity:
               
247
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
133, 297
               

               
Conread position:
               
261-608
               

               
Cow position:
               
chr1:71774070-71774418 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
351
               

               
Alignm identity:
               
247
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
133, 294
               

               
Conread position:
               
261-608
               

               
Cow position:
               
chr1:76207353-76207698 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
351
               

               
Alignm identity:
               
252
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
133, 266
               

               
Conread position:
               
261-608
               

               
Cow position:
               
chr1:76879196-76878848 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
351
               

               
Alignm identity:
               
246
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
133, 294
               

               
Conread position:
               
261-608
               

               
Cow position:
               
chr1:77176956-77177304 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
351
               

               
Alignm identity:
               
249
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
133, 294
               

               
Conread position:
               
261-608
               

               
Cow position:
               
chr1:78234523-78234870 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
350
               

               
Alignm identity:
               
247
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
117, 293
               

               
Conread position:
               
261-608
               

               
Cow position:
               
chr1:78920845-78921192 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
351
               

               
Alignm identity:
               
250
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
133, 294
               

               
Conread position:
               
261-608
               

               
Cow position:
               
chr1:84284868-84284520 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
351
               

               
Alignm identity:
               
249
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
133, 294
               

               
Conread position:
               
261-608
               

               
Cow position:
               
chr1:84447846-84447498 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
351
               

               
Alignm identity:
               
244
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
133, 294
               

               
Conread position:
               
261-608
               

               
Cow position:
               
chr1:84895008-84894659 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
353
               

               
Alignm identity:
               
255
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
101, 132
               

               
Conread position:
               
261-608
               

               
Cow position:
               
chr1:84905105-84904760 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
350
               

               
Alignm identity:
               
250
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
133, 229
               

               
Conread position:
               
261-608
               

               
Cow position:
               
chr1:85796112-85795764 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
351
               

               
Alignm identity:
               
250
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
133, 294
               

               
Conread position:
               
261-608
               

               
Cow position:
               
chr1:87239779-87240127 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
352
               

               
Alignm identity:
               
242
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
133, 180
               

               
Conread position:
               
261-608
               

               
Cow position:
               
chr1:87565414-87565066 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
351
               

               
Alignm identity:
               
251
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
133, 294
               

               
Conread position:
               
261-608
               

               
Cow position:
               
chr1:89792391-89792739 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
351
               

               
Alignm identity:
               
250
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
133, 294
               

               
Conread position:
               
261-608
               

               
Cow position:
               
chr1:95213479-95213827 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
351
               

               
Alignm identity:
               
251
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
133, 294
               

               
Conread position:
               
261-608
               

               
Cow position:
               
chr1:95457516-95457168 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
351
               

               
Alignm identity:
               
247
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
133, 294
               

               
Conread position:
               
261-608
               

               
Cow position:
               
chr1:95592561-95592909 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
351
               

               
Alignm identity:
               
249
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
133, 294
               

               
Conread position:
               
261-608
               

               
Cow position:
               
chr1:97171486-97171138 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
351
               

               
Alignm identity:
               
249
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
133, 294
               

               
Conread position:
               
261-608
               

               
Cow position:
               
chr1:99398781-99398433 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
351
               

               
Alignm identity:
               
249
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
133, 283
               

               
Conread position:
               
261-608
               

               
Cow position:
               
chr1:99912103-99912451 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
351
               

               
Alignm identity:
               
249
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
115, 294
               

               
Conread position:
               
261-608
               

               
Cow position:
               
chr1:102815637-102815289 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
352
               

               
Alignm identity:
               
247
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
133, 181
               

               
Conread position:
               
262-608
               

               
Cow position:
               
chr1:56667264-56666917 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
350
               

               
Alignm identity:
               
251
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
132, 293
               

               
Conread position:
               
262-608
               

               
Cow position:
               
chr1:89089373-89089720 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
350
               

               
Alignm identity:
               
245
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
132, 293
               

               
Conread position:
               
263-598
               

               
Cow position:
               
chr1:97206517-97206181 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
340
               

               
Alignm identity:
               
242
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
113, 178
               

               
Conread position:
               
264-542
               

               
Cow position:
               
chr1:61725213-61725493 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
282
               

               
Alignm identity:
               
221
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
132, 6
               

               
Conread position:
               
265-513
               

               
Cow position:
               
chr1:22467826-22467577 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
254
               

               
Alignm identity:
               
191
               

               
Alignm E-value:
               
8.40779e-45
               

               
Alignm gaps (pig, cow):
               
129, 50
               

               
Conread position:
               
265-607
               

               
Cow position:
               
chr1:62597063-62597406 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
346
               

               
Alignm identity:
               
247
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
129, 290
               

               
Conread position:
               
265-607
               

               
Cow position:
               
chr1:93499522-93499179 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
347
               

               
Alignm identity:
               
265
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
127, 223
               

               
Conread position:
               
265-608
               

               
Cow position:
               
chr1:16997503-16997846 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
347
               

               
Alignm identity:
               
216
               

               
Alignm E-value:
               
3e-25
               

               
Alignm gaps (pig, cow):
               
120, 167
               

               
Conread position:
               
265-608
               

               
Cow position:
               
chr1:31399326-31399675 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
354
               

               
Alignm identity:
               
244
               

               
Alignm E-value:
               
1.99965e-42
               

               
Alignm gaps (pig, cow):
               
131, 174
               

               
Conread position:
               
266-445
               

               
Cow position:
               
chr1:86709120-86709301 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
185
               

               
Alignm identity:
               
132
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
109, 59
               

               
Conread position:
               
266-476
               

               
Cow position:
               
chr1:73561755-73561963 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
214
               

               
Alignm identity:
               
161
               

               
Alignm E-value:
               
9e-36
               

               
Alignm gaps (pig, cow):
               
124, 60
               

               
Conread position:
               
266-528
               

               
Cow position:
               
chr1:90640923-90640666 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
264
               

               
Alignm identity:
               
197
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
127, 179
               

               
Conread position:
               
266-574
               

               
Cow position:
               
chr1:90836105-90836402 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
312
               

               
Alignm identity:
               
219
               

               
Alignm E-value:
               
1e-39
               

               
Alignm gaps (pig, cow):
               
124, 162
               

               
Conread position:
               
266-594
               

               
Cow position:
               
chr1:31765498-31765823 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
330
               

               
Alignm identity:
               
252
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
181, 205
               

               
Conread position:
               
266-595
               

               
Cow position:
               
chr1:53495362-53495020 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
344
               

               
Alignm identity:
               
250
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
133, 300
               

               
Conread position:
               
266-606
               

               
Cow position:
               
chr1:101551356-101551008 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
349
               

               
Alignm identity:
               
267
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
125, 0
               

               
Conread position:
               
266-607
               

               
Cow position:
               
chr1:61351046-61350713 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
344
               

               
Alignm identity:
               
253
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
124, 172
               

               
Conread position:
               
266-607
               

               
Cow position:
               
chr1:88648058-88648411 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
356
               

               
Alignm identity:
               
246
               

               
Alignm E-value:
               
7.00649e-44
               

               
Alignm gaps (pig, cow):
               
71, 202
               

               
Conread position:
               
266-608
               

               
Cow position:
               
chr1:2317743-2318082 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
345
               

               
Alignm identity:
               
254
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
85, 129
               

               
Conread position:
               
266-608
               

               
Cow position:
               
chr1:55020374-55020038 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
350
               

               
Alignm identity:
               
253
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
147, 18
               

               
Conread position:
               
266-608
               

               
Cow position:
               
chr1:81321408-81321067 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
349
               

               
Alignm identity:
               
251
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
110, 157
               

               
Conread position:
               
266-608
               

               
Cow position:
               
chr1:89766386-89766716 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
345
               

               
Alignm identity:
               
245
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
110, 141
               

               
Conread position:
               
267-374
               

               
Cow position:
               
chr1:75382889-75382782 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
108
               

               
Alignm identity:
               
87
               

               
Alignm E-value:
               
6e-22
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
267-501
               

               
Cow position:
               
chr1:95604909-95604672 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
238
               

               
Alignm identity:
               
170
               

               
Alignm E-value:
               
3e-36
               

               
Alignm gaps (pig, cow):
               
109, 0
               

               
Conread position:
               
267-532
               

               
Cow position:
               
chr1:7800506-7800244 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
267
               

               
Alignm identity:
               
185
               

               
Alignm E-value:
               
8e-35
               

               
Alignm gaps (pig, cow):
               
177, 118
               

               
Conread position:
               
267-553
               

               
Cow position:
               
chr1:7657415-7657710 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
300
               

               
Alignm identity:
               
206
               

               
Alignm E-value:
               
2e-31
               

               
Alignm gaps (pig, cow):
               
40, 17
               

               
Conread position:
               
267-570
               

               
Cow position:
               
chr1:72181727-72181429 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
310
               

               
Alignm identity:
               
211
               

               
Alignm E-value:
               
2e-30
               

               
Alignm gaps (pig, cow):
               
119, 52
               

               
Conread position:
               
267-608
               

               
Cow position:
               
chr1:3340835-3340478 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
358
               

               
Alignm identity:
               
261
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
127, 0
               

               
Conread position:
               
267-608
               

               
Cow position:
               
chr1:58219265-58218914 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
355
               

               
Alignm identity:
               
227
               

               
Alignm E-value:
               
3e-24
               

               
Alignm gaps (pig, cow):
               
146, 119
               

               
Conread position:
               
269-436
               

               
Cow position:
               
chr1:55686325-55686492 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
170
               

               
Alignm identity:
               
129
               

               
Alignm E-value:
               
1e-29
               

               
Alignm gaps (pig, cow):
               
121, 108
               

               
Conread position:
               
269-540
               

               
Cow position:
               
chr1:63876897-63877170 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
276
               

               
Alignm identity:
               
195
               

               
Alignm E-value:
               
5e-40
               

               
Alignm gaps (pig, cow):
               
106, 262
               

               
Conread position:
               
269-606
               

               
Cow position:
               
chr1:53397883-53397542 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
344
               

               
Alignm identity:
               
267
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
117, 278
               

               
Conread position:
               
270-411
               

               
Cow position:
               
chr1:78857430-78857570 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
143
               

               
Alignm identity:
               
106
               

               
Alignm E-value:
               
6e-21
               

               
Alignm gaps (pig, cow):
               
120, 55
               

               
Conread position:
               
270-413
               

               
Cow position:
               
chr1:69678431-69678572 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
144
               

               
Alignm identity:
               
107
               

               
Alignm E-value:
               
6e-22
               

               
Alignm gaps (pig, cow):
               
120, 0
               

               
Conread position:
               
270-413
               

               
Cow position:
               
chr1:89395487-89395341 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
147
               

               
Alignm identity:
               
109
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
124, 0
               

               
Conread position:
               
270-424
               

               
Cow position:
               
chr1:4618974-4619131 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
160
               

               
Alignm identity:
               
120
               

               
Alignm E-value:
               
7e-23
               

               
Alignm gaps (pig, cow):
               
39, 60
               

               
Conread position:
               
270-426
               

               
Cow position:
               
chr1:90864405-90864563 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
159
               

               
Alignm identity:
               
117
               

               
Alignm E-value:
               
3e-24
               

               
Alignm gaps (pig, cow):
               
120, 0
               

               
Conread position:
               
270-433
               

               
Cow position:
               
chr1:61742077-61742238 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
167
               

               
Alignm identity:
               
126
               

               
Alignm E-value:
               
3e-25
               

               
Alignm gaps (pig, cow):
               
120, 32
               

               
Conread position:
               
270-455
               

               
Cow position:
               
chr1:1991530-1991723 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
194
               

               
Alignm identity:
               
146
               

               
Alignm E-value:
               
2e-31
               

               
Alignm gaps (pig, cow):
               
113, 0
               

               
Conread position:
               
270-458
               

               
Cow position:
               
chr1:81613280-81613089 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
192
               

               
Alignm identity:
               
148
               

               
Alignm E-value:
               
3e-37
               

               
Alignm gaps (pig, cow):
               
112, 0
               

               
Conread position:
               
270-495
               

               
Cow position:
               
chr1:7350433-7350205 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
229
               

               
Alignm identity:
               
168
               

               
Alignm E-value:
               
4e-39
               

               
Alignm gaps (pig, cow):
               
120, 0
               

               
Conread position:
               
270-503
               

               
Cow position:
               
chr1:98563054-98562819 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
237
               

               
Alignm identity:
               
183
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
105, 89
               

               
Conread position:
               
270-529
               

               
Cow position:
               
chr1:9443955-9444209 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
264
               

               
Alignm identity:
               
181
               

               
Alignm E-value:
               
1e-27
               

               
Alignm gaps (pig, cow):
               
177, 115
               

               
Conread position:
               
270-529
               

               
Cow position:
               
chr1:99118280-99118022 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
266
               

               
Alignm identity:
               
185
               

               
Alignm E-value:
               
5e-31
               

               
Alignm gaps (pig, cow):
               
121, 154
               

               
Conread position:
               
270-592
               

               
Cow position:
               
chr1:49181949-49181633 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
329
               

               
Alignm identity:
               
226
               

               
Alignm E-value:
               
1e-36
               

               
Alignm gaps (pig, cow):
               
120, 163
               

               
Conread position:
               
270-599
               

               
Cow position:
               
chr1:11772186-11772509 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
333
               

               
Alignm identity:
               
247
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
121, 243
               

               
Conread position:
               
270-601
               

               
Cow position:
               
chr1:42874056-42874384 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
335
               

               
Alignm identity:
               
260
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
122, 37
               

               
Conread position:
               
270-601
               

               
Cow position:
               
chr1:68619043-68619356 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
333
               

               
Alignm identity:
               
244
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
176, 93
               

               
Conread position:
               
270-602
               

               
Cow position:
               
chr1:27545710-27545373 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
341
               

               
Alignm identity:
               
228
               

               
Alignm E-value:
               
9e-36
               

               
Alignm gaps (pig, cow):
               
97, 74
               

               
Conread position:
               
270-605
               

               
Cow position:
               
chr1:81569140-81569477 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
340
               

               
Alignm identity:
               
252
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
121, 282
               

               
Conread position:
               
270-606
               

               
Cow position:
               
chr1:40062343-40062004 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
341
               

               
Alignm identity:
               
262
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
124, 280
               

               
Conread position:
               
270-606
               

               
Cow position:
               
chr1:41696949-41696619 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
338
               

               
Alignm identity:
               
256
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
177, 116
               

               
Conread position:
               
270-606
               

               
Cow position:
               
chr1:61005671-61006002 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
340
               

               
Alignm identity:
               
252
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
120, 158
               

               
Conread position:
               
270-607
               

               
Cow position:
               
chr1:14528305-14528651 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
347
               

               
Alignm identity:
               
245
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
123, 0
               

               
Conread position:
               
270-607
               

               
Cow position:
               
chr1:16839473-16839135 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
341
               

               
Alignm identity:
               
243
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
99, 269
               

               
Conread position:
               
270-608
               

               
Cow position:
               
chr1:14561053-14561401 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
349
               

               
Alignm identity:
               
233
               

               
Alignm E-value:
               
4e-39
               

               
Alignm gaps (pig, cow):
               
144, 0
               

               
Conread position:
               
270-608
               

               
Cow position:
               
chr1:22728942-22728605 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
342
               

               
Alignm identity:
               
266
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
126, 155
               

               
Conread position:
               
270-608
               

               
Cow position:
               
chr1:41004472-41004809 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
343
               

               
Alignm identity:
               
258
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
64, 106
               

               
Conread position:
               
270-608
               

               
Cow position:
               
chr1:51981122-51980783 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
342
               

               
Alignm identity:
               
270
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
124, 281
               

               
Conread position:
               
270-608
               

               
Cow position:
               
chr1:60120323-60119980 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
347
               

               
Alignm identity:
               
239
               

               
Alignm E-value:
               
2.00386e-43
               

               
Alignm gaps (pig, cow):
               
149, 124
               

               
Conread position:
               
270-608
               

               
Cow position:
               
chr1:61564687-61564349 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
346
               

               
Alignm identity:
               
257
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
105, 168
               

               
Conread position:
               
270-608
               

               
Cow position:
               
chr1:84812042-84812394 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
355
               

               
Alignm identity:
               
264
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
126, 290
               

               
Conread position:
               
270-608
               

               
Cow position:
               
chr1:85361750-85361411 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
342
               

               
Alignm identity:
               
259
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
122, 277
               

               
Conread position:
               
270-608
               

               
Cow position:
               
chr1:98494317-98493986 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
345
               

               
Alignm identity:
               
245
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
124, 94
               

               
Conread position:
               
270-608
               

               
Cow position:
               
chr1:98551607-98551277 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
339
               

               
Alignm identity:
               
252
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
82, 0
               

               
Conread position:
               
271-425
               

               
Cow position:
               
chr1:29935488-29935641 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
156
               

               
Alignm identity:
               
114
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
111, 143
               

               
Conread position:
               
271-480
               

               
Cow position:
               
chr1:71121402-71121188 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
215
               

               
Alignm identity:
               
153
               

               
Alignm E-value:
               
5e-30
               

               
Alignm gaps (pig, cow):
               
73, 0
               

               
Conread position:
               
271-608
               

               
Cow position:
               
chr1:92198661-92198333 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
339
               

               
Alignm identity:
               
241
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
176, 130
               

               
Conread position:
               
272-495
               

               
Cow position:
               
chr1:65530011-65530237 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
227
               

               
Alignm identity:
               
164
               

               
Alignm E-value:
               
9e-36
               

               
Alignm gaps (pig, cow):
               
97, 0
               

               
Conread position:
               
272-544
               

               
Cow position:
               
chr1:52598207-52598478 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
276
               

               
Alignm identity:
               
197
               

               
Alignm E-value:
               
4.99997e-41
               

               
Alignm gaps (pig, cow):
               
122, 254
               

               
Conread position:
               
272-545
               

               
Cow position:
               
chr1:44244601-44244876 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
277
               

               
Alignm identity:
               
193
               

               
Alignm E-value:
               
1e-38
               

               
Alignm gaps (pig, cow):
               
104, 198
               

               
Conread position:
               
272-546
               

               
Cow position:
               
chr1:40170472-40170195 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
278
               

               
Alignm identity:
               
194
               

               
Alignm E-value:
               
5e-40
               

               
Alignm gaps (pig, cow):
               
104, 0
               

               
Conread position:
               
272-562
               

               
Cow position:
               
chr1:82861667-82861374 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
296
               

               
Alignm identity:
               
226
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
122, 281
               

               
Conread position:
               
272-589
               

               
Cow position:
               
chr1:83185140-83184828 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
321
               

               
Alignm identity:
               
244
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
104, 93
               

               
Conread position:
               
272-595
               

               
Cow position:
               
chr1:79497802-79498126 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
327
               

               
Alignm identity:
               
235
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
122, 272
               

               
Conread position:
               
272-598
               

               
Cow position:
               
chr1:7416631-7416304 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
330
               

               
Alignm identity:
               
233
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
104, 283
               

               
Conread position:
               
272-598
               

               
Cow position:
               
chr1:12506569-12506895 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
329
               

               
Alignm identity:
               
236
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
122, 282
               

               
Conread position:
               
272-598
               

               
Cow position:
               
chr1:60343129-60342801 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
331
               

               
Alignm identity:
               
235
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
122, 284
               

               
Conread position:
               
272-607
               

               
Cow position:
               
chr1:9376227-9376562 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
338
               

               
Alignm identity:
               
241
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
120, 282
               

               
Conread position:
               
272-607
               

               
Cow position:
               
chr1:101547150-101547484 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
343
               

               
Alignm identity:
               
237
               

               
Alignm E-value:
               
1.99993e-41
               

               
Alignm gaps (pig, cow):
               
116, 195
               

               
Conread position:
               
272-608
               

               
Cow position:
               
chr1:7197495-7197157 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
341
               

               
Alignm identity:
               
239
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
104, 284
               

               
Conread position:
               
272-608
               

               
Cow position:
               
chr1:13451942-13451605 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
340
               

               
Alignm identity:
               
241
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
122, 283
               

               
Conread position:
               
272-608
               

               
Cow position:
               
chr1:57421242-57421576 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
340
               

               
Alignm identity:
               
239
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
122, 136
               

               
Conread position:
               
272-608
               

               
Cow position:
               
chr1:63760391-63760728 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
340
               

               
Alignm identity:
               
240
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
122, 283
               

               
Conread position:
               
272-608
               

               
Cow position:
               
chr1:72765886-72766219 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
338
               

               
Alignm identity:
               
234
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
175, 118
               

               
Conread position:
               
272-608
               

               
Cow position:
               
chr1:77553848-77554186 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
341
               

               
Alignm identity:
               
238
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
122, 284
               

               
Conread position:
               
272-608
               

               
Cow position:
               
chr1:85577703-85578041 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
341
               

               
Alignm identity:
               
240
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
122, 284
               

               
Conread position:
               
275-469
               

               
Cow position:
               
chr1:75797897-75798094 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
198
               

               
Alignm identity:
               
135
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
119, 0
               

               
Conread position:
               
275-534
               

               
Cow position:
               
chr1:76487766-76488025 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
263
               

               
Alignm identity:
               
170
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
115, 184
               

               
Conread position:
               
275-607
               

               
Cow position:
               
chr1:89492089-89492423 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
337
               

               
Alignm identity:
               
244
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
100, 284
               

               
Conread position:
               
275-608
               

               
Cow position:
               
chr1:56204663-56204997 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
337
               

               
Alignm identity:
               
238
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
119, 280
               

               
Conread position:
               
275-608
               

               
Cow position:
               
chr1:61493950-61493616 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
337
               

               
Alignm identity:
               
241
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
119, 280
               
Show alignments to all cow chromosomes.