• Home
• Research
• Resources
• Publications
• About
• People
• Events
• Jobs
• News
• Contact

Cow genome map

           
Conread name:
           
Pig4-TMW8004P22
        

               
Conread position:
               
197-608
               

               
Cow position:
               
chr15:36328621-36329033 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
418
               

               
Alignm identity:
               
280
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
28, 246
               

               
Conread position:
               
233-575
               

               
Cow position:
               
chr15:18720479-18720821 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
346
               

               
Alignm identity:
               
252
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
157, 18
               

               
Conread position:
               
246-511
               

               
Cow position:
               
chr15:10450725-10450451 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
277
               

               
Alignm identity:
               
201
               

               
Alignm E-value:
               
8.00001e-41
               

               
Alignm gaps (pig, cow):
               
12, 25
               

               
Conread position:
               
251-587
               

               
Cow position:
               
chr15:16937443-16937106 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
340
               

               
Alignm identity:
               
243
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
125, 304
               

               
Conread position:
               
251-598
               

               
Cow position:
               
chr15:5021145-5020797 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
351
               

               
Alignm identity:
               
247
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
125, 304
               

               
Conread position:
               
251-608
               

               
Cow position:
               
chr15:1653759-1653401 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
361
               

               
Alignm identity:
               
252
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
143, 304
               

               
Conread position:
               
251-608
               

               
Cow position:
               
chr15:3007055-3007412 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
361
               

               
Alignm identity:
               
260
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
143, 244
               

               
Conread position:
               
255-468
               

               
Cow position:
               
chr15:3010892-3010676 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
217
               

               
Alignm identity:
               
152
               

               
Alignm E-value:
               
2e-29
               

               
Alignm gaps (pig, cow):
               
121, 0
               

               
Conread position:
               
255-477
               

               
Cow position:
               
chr15:19733552-19733773 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
224
               

               
Alignm identity:
               
158
               

               
Alignm E-value:
               
9e-32
               

               
Alignm gaps (pig, cow):
               
192, 15
               

               
Conread position:
               
255-490
               

               
Cow position:
               
chr15:28150433-28150672 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
240
               

               
Alignm identity:
               
170
               

               
Alignm E-value:
               
1e-34
               

               
Alignm gaps (pig, cow):
               
121, 0
               

               
Conread position:
               
255-554
               

               
Cow position:
               
chr15:48297596-48297902 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
307
               

               
Alignm identity:
               
216
               

               
Alignm E-value:
               
4.2039e-45
               

               
Alignm gaps (pig, cow):
               
121, 0
               

               
Conread position:
               
255-566
               

               
Cow position:
               
chr15:32611606-32611294 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
315
               

               
Alignm identity:
               
225
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
121, 289
               

               
Conread position:
               
255-572
               

               
Cow position:
               
chr15:6151851-6152165 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
321
               

               
Alignm identity:
               
231
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
121, 245
               

               
Conread position:
               
255-585
               

               
Cow position:
               
chr15:42534615-42534282 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
336
               

               
Alignm identity:
               
238
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
121, 291
               

               
Conread position:
               
255-607
               

               
Cow position:
               
chr15:4642983-4642629 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
356
               

               
Alignm identity:
               
257
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
121, 300
               

               
Conread position:
               
255-608
               

               
Cow position:
               
chr15:4389530-4389177 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
357
               

               
Alignm identity:
               
255
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
121, 275
               

               
Conread position:
               
255-608
               

               
Cow position:
               
chr15:4925929-4925573 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
359
               

               
Alignm identity:
               
258
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
121, 291
               

               
Conread position:
               
255-608
               

               
Cow position:
               
chr15:6549831-6550185 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
357
               

               
Alignm identity:
               
255
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
121, 285
               

               
Conread position:
               
255-608
               

               
Cow position:
               
chr15:29475760-29476113 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
357
               

               
Alignm identity:
               
260
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
121, 275
               

               
Conread position:
               
258-436
               

               
Cow position:
               
chr15:41792460-41792640 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
181
               

               
Alignm identity:
               
128
               

               
Alignm E-value:
               
1e-24
               

               
Alignm gaps (pig, cow):
               
118, 0
               

               
Conread position:
               
258-445
               

               
Cow position:
               
chr15:1701878-1702067 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
191
               

               
Alignm identity:
               
134
               

               
Alignm E-value:
               
1e-23
               

               
Alignm gaps (pig, cow):
               
107, 113
               

               
Conread position:
               
258-465
               

               
Cow position:
               
chr15:27759381-27759174 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
211
               

               
Alignm identity:
               
145
               

               
Alignm E-value:
               
1e-23
               

               
Alignm gaps (pig, cow):
               
136, 182
               

               
Conread position:
               
258-468
               

               
Cow position:
               
chr15:44613625-44613838 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
214
               

               
Alignm identity:
               
146
               

               
Alignm E-value:
               
2e-25
               

               
Alignm gaps (pig, cow):
               
136, 0
               

               
Conread position:
               
258-482
               

               
Cow position:
               
chr15:7237880-7237653 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
228
               

               
Alignm identity:
               
159
               

               
Alignm E-value:
               
8e-31
               

               
Alignm gaps (pig, cow):
               
128, 0
               

               
Conread position:
               
258-493
               

               
Cow position:
               
chr15:16492868-16493107 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
240
               

               
Alignm identity:
               
167
               

               
Alignm E-value:
               
9e-32
               

               
Alignm gaps (pig, cow):
               
15, 0
               

               
Conread position:
               
258-497
               

               
Cow position:
               
chr15:16778516-16778758 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
243
               

               
Alignm identity:
               
174
               

               
Alignm E-value:
               
6e-38
               

               
Alignm gaps (pig, cow):
               
118, 0
               

               
Conread position:
               
258-514
               

               
Cow position:
               
chr15:18250003-18249744 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
260
               

               
Alignm identity:
               
185
               

               
Alignm E-value:
               
8.00001e-41
               

               
Alignm gaps (pig, cow):
               
136, 0
               

               
Conread position:
               
258-523
               

               
Cow position:
               
chr15:1268143-1267872 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
272
               

               
Alignm identity:
               
192
               

               
Alignm E-value:
               
2e-39
               

               
Alignm gaps (pig, cow):
               
101, 0
               

               
Conread position:
               
258-540
               

               
Cow position:
               
chr15:32647919-32647639 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
288
               

               
Alignm identity:
               
195
               

               
Alignm E-value:
               
2e-29
               

               
Alignm gaps (pig, cow):
               
128, 60
               

               
Conread position:
               
258-540
               

               
Cow position:
               
chr15:32675117-32675397 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
288
               

               
Alignm identity:
               
195
               

               
Alignm E-value:
               
2e-29
               

               
Alignm gaps (pig, cow):
               
128, 60
               

               
Conread position:
               
258-588
               

               
Cow position:
               
chr15:37823121-37822790 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
334
               

               
Alignm identity:
               
241
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
132, 286
               

               
Conread position:
               
258-589
               

               
Cow position:
               
chr15:21798539-21798868 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
335
               

               
Alignm identity:
               
232
               

               
Alignm E-value:
               
1.4013e-45
               

               
Alignm gaps (pig, cow):
               
118, 96
               

               
Conread position:
               
258-592
               

               
Cow position:
               
chr15:25133722-25133386 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
339
               

               
Alignm identity:
               
238
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
118, 298
               

               
Conread position:
               
258-594
               

               
Cow position:
               
chr15:9908743-9909080 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
340
               

               
Alignm identity:
               
229
               

               
Alignm E-value:
               
2.99878e-43
               

               
Alignm gaps (pig, cow):
               
132, 289
               

               
Conread position:
               
258-598
               

               
Cow position:
               
chr15:2591172-2590831 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
345
               

               
Alignm identity:
               
245
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
136, 184
               

               
Conread position:
               
258-598
               

               
Cow position:
               
chr15:21438047-21438388 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
344
               

               
Alignm identity:
               
241
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
136, 297
               

               
Conread position:
               
258-607
               

               
Cow position:
               
chr15:21913334-21913684 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
353
               

               
Alignm identity:
               
255
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
118, 286
               

               
Conread position:
               
258-607
               

               
Cow position:
               
chr15:42728145-42727801 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
354
               

               
Alignm identity:
               
253
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
129, 94
               

               
Conread position:
               
258-608
               

               
Cow position:
               
chr15:2009080-2008732 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
354
               

               
Alignm identity:
               
249
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
118, 77
               

               
Conread position:
               
258-608
               

               
Cow position:
               
chr15:4641233-4640882 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
354
               

               
Alignm identity:
               
251
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
136, 297
               

               
Conread position:
               
258-608
               

               
Cow position:
               
chr15:7566772-7566428 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
354
               

               
Alignm identity:
               
243
               

               
Alignm E-value:
               
4.2039e-45
               

               
Alignm gaps (pig, cow):
               
136, 256
               

               
Conread position:
               
258-608
               

               
Cow position:
               
chr15:18278226-18277875 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
354
               

               
Alignm identity:
               
251
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
136, 297
               

               
Conread position:
               
258-608
               

               
Cow position:
               
chr15:21958771-21958420 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
354
               

               
Alignm identity:
               
248
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
136, 297
               

               
Conread position:
               
258-608
               

               
Cow position:
               
chr15:23665707-23666065 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
361
               

               
Alignm identity:
               
247
               

               
Alignm E-value:
               
4.2039e-45
               

               
Alignm gaps (pig, cow):
               
134, 304
               

               
Conread position:
               
258-608
               

               
Cow position:
               
chr15:25203192-25203543 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
354
               

               
Alignm identity:
               
248
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
136, 297
               

               
Conread position:
               
258-608
               

               
Cow position:
               
chr15:29018368-29018017 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
354
               

               
Alignm identity:
               
251
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
136, 297
               

               
Conread position:
               
258-608
               

               
Cow position:
               
chr15:42584987-42584636 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
355
               

               
Alignm identity:
               
253
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
136, 183
               

               
Conread position:
               
258-608
               

               
Cow position:
               
chr15:50085785-50086136 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
354
               

               
Alignm identity:
               
250
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
136, 297
               

               
Conread position:
               
259-601
               

               
Cow position:
               
chr15:794822-794481 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
349
               

               
Alignm identity:
               
253
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
133, 11
               

               
Conread position:
               
260-393
               

               
Cow position:
               
chr15:21522982-21523114 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
134
               

               
Alignm identity:
               
102
               

               
Alignm E-value:
               
4e-23
               

               
Alignm gaps (pig, cow):
               
76, 0
               

               
Conread position:
               
260-396
               

               
Cow position:
               
chr15:31857784-31857920 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
138
               

               
Alignm identity:
               
106
               

               
Alignm E-value:
               
4e-24
               

               
Alignm gaps (pig, cow):
               
132, 10
               

               
Conread position:
               
260-411
               

               
Cow position:
               
chr15:39405925-39406078 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
154
               

               
Alignm identity:
               
118
               

               
Alignm E-value:
               
6e-28
               

               
Alignm gaps (pig, cow):
               
9, 0
               

               
Conread position:
               
260-423
               

               
Cow position:
               
chr15:38883347-38883511 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
166
               

               
Alignm identity:
               
121
               

               
Alignm E-value:
               
1e-24
               

               
Alignm gaps (pig, cow):
               
132, 157
               

               
Conread position:
               
260-424
               

               
Cow position:
               
chr15:33303524-33303690 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
169
               

               
Alignm identity:
               
123
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
14, 93
               

               
Conread position:
               
260-450
               

               
Cow position:
               
chr15:38806306-38806115 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
195
               

               
Alignm identity:
               
137
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
9, 52
               

               
Conread position:
               
260-471
               

               
Cow position:
               
chr15:19186424-19186213 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
214
               

               
Alignm identity:
               
154
               

               
Alignm E-value:
               
1e-32
               

               
Alignm gaps (pig, cow):
               
133, 176
               

               
Conread position:
               
260-473
               

               
Cow position:
               
chr15:17084403-17084616 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
216
               

               
Alignm identity:
               
161
               

               
Alignm E-value:
               
2e-37
               

               
Alignm gaps (pig, cow):
               
145, 134
               

               
Conread position:
               
260-480
               

               
Cow position:
               
chr15:53101782-53102002 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
224
               

               
Alignm identity:
               
156
               

               
Alignm E-value:
               
6e-28
               

               
Alignm gaps (pig, cow):
               
11, 116
               

               
Conread position:
               
260-493
               

               
Cow position:
               
chr15:40999873-40999625 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
250
               

               
Alignm identity:
               
183
               

               
Alignm E-value:
               
4e-35
               

               
Alignm gaps (pig, cow):
               
81, 10
               

               
Conread position:
               
260-506
               

               
Cow position:
               
chr15:13387275-13387520 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
250
               

               
Alignm identity:
               
188
               

               
Alignm E-value:
               
9.80909e-45
               

               
Alignm gaps (pig, cow):
               
164, 10
               

               
Conread position:
               
260-515
               

               
Cow position:
               
chr15:20487018-20486758 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
269
               

               
Alignm identity:
               
202
               

               
Alignm E-value:
               
8.00001e-41
               

               
Alignm gaps (pig, cow):
               
130, 47
               

               
Conread position:
               
260-531
               

               
Cow position:
               
chr15:9062405-9062111 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
295
               

               
Alignm identity:
               
219
               

               
Alignm E-value:
               
4.06377e-44
               

               
Alignm gaps (pig, cow):
               
14, 0
               

               
Conread position:
               
260-562
               

               
Cow position:
               
chr15:27123361-27123056 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
308
               

               
Alignm identity:
               
227
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
12, 272
               

               
Conread position:
               
260-572
               

               
Cow position:
               
chr15:20309139-20309460 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
327
               

               
Alignm identity:
               
225
               

               
Alignm E-value:
               
4e-35
               

               
Alignm gaps (pig, cow):
               
42, 24
               

               
Conread position:
               
260-607
               

               
Cow position:
               
chr15:15881124-15881459 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
351
               

               
Alignm identity:
               
256
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
13, 131
               

               
Conread position:
               
260-607
               

               
Cow position:
               
chr15:19119409-19119077 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
350
               

               
Alignm identity:
               
259
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
187, 43
               

               
Conread position:
               
260-608
               

               
Cow position:
               
chr15:31992721-31993066 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
352
               

               
Alignm identity:
               
262
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
126, 62
               

               
Conread position:
               
260-608
               

               
Cow position:
               
chr15:37395480-37395131 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
352
               

               
Alignm identity:
               
254
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
116, 287
               

               
Conread position:
               
261-460
               

               
Cow position:
               
chr15:6562470-6562672 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
203
               

               
Alignm identity:
               
137
               

               
Alignm E-value:
               
3e-22
               

               
Alignm gaps (pig, cow):
               
133, 0
               

               
Conread position:
               
261-473
               

               
Cow position:
               
chr15:27890765-27890550 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
216
               

               
Alignm identity:
               
146
               

               
Alignm E-value:
               
1e-24
               

               
Alignm gaps (pig, cow):
               
133, 0
               

               
Conread position:
               
261-473
               

               
Cow position:
               
chr15:31084670-31084885 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
216
               

               
Alignm identity:
               
152
               

               
Alignm E-value:
               
3e-30
               

               
Alignm gaps (pig, cow):
               
133, 0
               

               
Conread position:
               
261-478
               

               
Cow position:
               
chr15:45671972-45672192 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
221
               

               
Alignm identity:
               
149
               

               
Alignm E-value:
               
5e-25
               

               
Alignm gaps (pig, cow):
               
133, 0
               

               
Conread position:
               
261-482
               

               
Cow position:
               
chr15:3782547-3782324 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
225
               

               
Alignm identity:
               
153
               

               
Alignm E-value:
               
5e-26
               

               
Alignm gaps (pig, cow):
               
133, 221
               

               
Conread position:
               
261-497
               

               
Cow position:
               
chr15:27015442-27015681 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
240
               

               
Alignm identity:
               
168
               

               
Alignm E-value:
               
1e-33
               

               
Alignm gaps (pig, cow):
               
115, 0
               

               
Conread position:
               
261-499
               

               
Cow position:
               
chr15:25510981-25510740 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
242
               

               
Alignm identity:
               
166
               

               
Alignm E-value:
               
3e-31
               

               
Alignm gaps (pig, cow):
               
133, 0
               

               
Conread position:
               
261-506
               

               
Cow position:
               
chr15:8643462-8643710 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
249
               

               
Alignm identity:
               
174
               

               
Alignm E-value:
               
1e-35
               

               
Alignm gaps (pig, cow):
               
133, 0
               

               
Conread position:
               
261-511
               

               
Cow position:
               
chr15:38000481-38000734 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
254
               

               
Alignm identity:
               
183
               

               
Alignm E-value:
               
9.00054e-42
               

               
Alignm gaps (pig, cow):
               
133, 0
               

               
Conread position:
               
261-512
               

               
Cow position:
               
chr15:45195916-45196170 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
255
               

               
Alignm identity:
               
177
               

               
Alignm E-value:
               
1e-35
               

               
Alignm gaps (pig, cow):
               
133, 0
               

               
Conread position:
               
261-522
               

               
Cow position:
               
chr15:22255699-22255435 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
265
               

               
Alignm identity:
               
188
               

               
Alignm E-value:
               
3.00004e-41
               

               
Alignm gaps (pig, cow):
               
133, 0
               

               
Conread position:
               
261-525
               

               
Cow position:
               
chr15:3724338-3724605 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
268
               

               
Alignm identity:
               
188
               

               
Alignm E-value:
               
7e-40
               

               
Alignm gaps (pig, cow):
               
133, 0
               

               
Conread position:
               
261-530
               

               
Cow position:
               
chr15:22137779-22138051 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
273
               

               
Alignm identity:
               
195
               

               
Alignm E-value:
               
4.06377e-44
               

               
Alignm gaps (pig, cow):
               
133, 0
               

               
Conread position:
               
261-546
               

               
Cow position:
               
chr15:1735903-1735615 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
289
               

               
Alignm identity:
               
205
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
133, 0
               

               
Conread position:
               
261-546
               

               
Cow position:
               
chr15:12184015-12184303 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
289
               

               
Alignm identity:
               
202
               

               
Alignm E-value:
               
1.00053e-42
               

               
Alignm gaps (pig, cow):
               
132, 0
               

               
Conread position:
               
261-546
               

               
Cow position:
               
chr15:50141748-50142036 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
289
               

               
Alignm identity:
               
200
               

               
Alignm E-value:
               
8.00001e-41
               

               
Alignm gaps (pig, cow):
               
115, 0
               

               
Conread position:
               
261-547
               

               
Cow position:
               
chr15:49685428-49685717 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
291
               

               
Alignm identity:
               
205
               

               
Alignm E-value:
               
2.99878e-43
               

               
Alignm gaps (pig, cow):
               
133, 180
               

               
Conread position:
               
261-563
               

               
Cow position:
               
chr15:39015846-39016149 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
306
               

               
Alignm identity:
               
217
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
132, 294
               

               
Conread position:
               
261-572
               

               
Cow position:
               
chr15:3838043-3837733 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
315
               

               
Alignm identity:
               
222
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
133, 269
               

               
Conread position:
               
261-578
               

               
Cow position:
               
chr15:9835527-9835209 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
322
               

               
Alignm identity:
               
231
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
133, 180
               

               
Conread position:
               
261-582
               

               
Cow position:
               
chr15:32263186-32262864 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
325
               

               
Alignm identity:
               
234
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
133, 294
               

               
Conread position:
               
261-582
               

               
Cow position:
               
chr15:52979761-52980083 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
325
               

               
Alignm identity:
               
231
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
133, 294
               

               
Conread position:
               
261-585
               

               
Cow position:
               
chr15:22918249-22918577 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
332
               

               
Alignm identity:
               
232
               

               
Alignm E-value:
               
4.2039e-45
               

               
Alignm gaps (pig, cow):
               
89, 105
               

               
Conread position:
               
261-588
               

               
Cow position:
               
chr15:6098580-6098252 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
331
               

               
Alignm identity:
               
232
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
115, 294
               

               
Conread position:
               
261-590
               

               
Cow position:
               
chr15:53419538-53419868 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
333
               

               
Alignm identity:
               
235
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
133, 294
               

               
Conread position:
               
261-592
               

               
Cow position:
               
chr15:3289948-3289617 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
334
               

               
Alignm identity:
               
233
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
133, 293
               

               
Conread position:
               
261-595
               

               
Cow position:
               
chr15:31767469-31767804 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
338
               

               
Alignm identity:
               
233
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
133, 294
               

               
Conread position:
               
261-597
               

               
Cow position:
               
chr15:29236476-29236139 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
340
               

               
Alignm identity:
               
240
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
133, 294
               

               
Conread position:
               
261-598
               

               
Cow position:
               
chr15:3004459-3004797 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
341
               

               
Alignm identity:
               
241
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
117, 294
               

               
Conread position:
               
261-598
               

               
Cow position:
               
chr15:5008213-5008552 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
343
               

               
Alignm identity:
               
244
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
115, 132
               

               
Conread position:
               
261-598
               

               
Cow position:
               
chr15:8031139-8031476 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
340
               

               
Alignm identity:
               
240
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
115, 293
               

               
Conread position:
               
261-598
               

               
Cow position:
               
chr15:14378792-14379122 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
340
               

               
Alignm identity:
               
238
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
133, 176
               

               
Conread position:
               
261-598
               

               
Cow position:
               
chr15:31271200-31270862 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
341
               

               
Alignm identity:
               
242
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
133, 294
               

               
Conread position:
               
261-598
               

               
Cow position:
               
chr15:49190788-49191127 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
344
               

               
Alignm identity:
               
245
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
133, 272
               

               
Conread position:
               
261-598
               

               
Cow position:
               
chr15:50309719-50309381 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
341
               

               
Alignm identity:
               
239
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
133, 294
               

               
Conread position:
               
261-606
               

               
Cow position:
               
chr15:4138329-4138670 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
350
               

               
Alignm identity:
               
252
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
133, 150
               

               
Conread position:
               
261-606
               

               
Cow position:
               
chr15:38898617-38898959 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
349
               

               
Alignm identity:
               
256
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
115, 176
               

               
Conread position:
               
261-607
               

               
Cow position:
               
chr15:22544857-22545204 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
351
               

               
Alignm identity:
               
253
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
126, 117
               

               
Conread position:
               
261-607
               

               
Cow position:
               
chr15:33376616-33376267 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
352
               

               
Alignm identity:
               
244
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
133, 300
               

               
Conread position:
               
261-607
               

               
Cow position:
               
chr15:45943921-45944268 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
350
               

               
Alignm identity:
               
244
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
133, 294
               

               
Conread position:
               
261-608
               

               
Cow position:
               
chr15:349095-348747 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
351
               

               
Alignm identity:
               
249
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
115, 294
               

               
Conread position:
               
261-608
               

               
Cow position:
               
chr15:488498-488846 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
351
               

               
Alignm identity:
               
248
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
115, 294
               

               
Conread position:
               
261-608
               

               
Cow position:
               
chr15:1250959-1251307 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
351
               

               
Alignm identity:
               
247
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
133, 294
               

               
Conread position:
               
261-608
               

               
Cow position:
               
chr15:2534508-2534160 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
351
               

               
Alignm identity:
               
249
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
133, 294
               

               
Conread position:
               
261-608
               

               
Cow position:
               
chr15:2797111-2796763 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
352
               

               
Alignm identity:
               
253
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
133, 280
               

               
Conread position:
               
261-608
               

               
Cow position:
               
chr15:3734330-3734676 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
352
               

               
Alignm identity:
               
252
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
133, 181
               

               
Conread position:
               
261-608
               

               
Cow position:
               
chr15:5479662-5480009 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
351
               

               
Alignm identity:
               
246
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
133, 100
               

               
Conread position:
               
261-608
               

               
Cow position:
               
chr15:7452893-7453241 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
351
               

               
Alignm identity:
               
247
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
133, 294
               

               
Conread position:
               
261-608
               

               
Cow position:
               
chr15:7586020-7586368 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
351
               

               
Alignm identity:
               
242
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
133, 294
               

               
Conread position:
               
261-608
               

               
Cow position:
               
chr15:13431936-13431588 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
351
               

               
Alignm identity:
               
245
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
133, 283
               

               
Conread position:
               
261-608
               

               
Cow position:
               
chr15:15138784-15139132 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
351
               

               
Alignm identity:
               
249
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
133, 294
               

               
Conread position:
               
261-608
               

               
Cow position:
               
chr15:16344893-16345241 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
351
               

               
Alignm identity:
               
250
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
133, 294
               

               
Conread position:
               
261-608
               

               
Cow position:
               
chr15:17260964-17260624 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
351
               

               
Alignm identity:
               
248
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
129, 115
               

               
Conread position:
               
261-608
               

               
Cow position:
               
chr15:18263334-18263682 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
351
               

               
Alignm identity:
               
244
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
133, 294
               

               
Conread position:
               
261-608
               

               
Cow position:
               
chr15:20015373-20015721 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
351
               

               
Alignm identity:
               
245
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
133, 294
               

               
Conread position:
               
261-608
               

               
Cow position:
               
chr15:20403904-20404254 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
353
               

               
Alignm identity:
               
250
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
133, 296
               

               
Conread position:
               
261-608
               

               
Cow position:
               
chr15:21807626-21807278 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
352
               

               
Alignm identity:
               
248
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
133, 180
               

               
Conread position:
               
261-608
               

               
Cow position:
               
chr15:22759235-22759571 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
351
               

               
Alignm identity:
               
242
               

               
Alignm E-value:
               
2.99878e-43
               

               
Alignm gaps (pig, cow):
               
125, 275
               

               
Conread position:
               
261-608
               

               
Cow position:
               
chr15:22811717-22812065 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
351
               

               
Alignm identity:
               
248
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
133, 294
               

               
Conread position:
               
261-608
               

               
Cow position:
               
chr15:24088679-24088331 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
351
               

               
Alignm identity:
               
251
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
133, 294
               

               
Conread position:
               
261-608
               

               
Cow position:
               
chr15:25181054-25181402 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
351
               

               
Alignm identity:
               
249
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
133, 294
               

               
Conread position:
               
261-608
               

               
Cow position:
               
chr15:31489829-31489481 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
351
               

               
Alignm identity:
               
246
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
133, 294
               

               
Conread position:
               
261-608
               

               
Cow position:
               
chr15:33258227-33258575 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
351
               

               
Alignm identity:
               
254
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
115, 294
               

               
Conread position:
               
261-608
               

               
Cow position:
               
chr15:38199383-38199035 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
351
               

               
Alignm identity:
               
243
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
133, 283
               

               
Conread position:
               
261-608
               

               
Cow position:
               
chr15:41105267-41105615 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
351
               

               
Alignm identity:
               
247
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
133, 294
               

               
Conread position:
               
261-608
               

               
Cow position:
               
chr15:42595523-42595187 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
350
               

               
Alignm identity:
               
249
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
170, 89
               

               
Conread position:
               
261-608
               

               
Cow position:
               
chr15:43239663-43240011 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
351
               

               
Alignm identity:
               
249
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
133, 294
               

               
Conread position:
               
261-608
               

               
Cow position:
               
chr15:43756378-43756726 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
351
               

               
Alignm identity:
               
245
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
133, 294
               

               
Conread position:
               
261-608
               

               
Cow position:
               
chr15:44355382-44355730 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
351
               

               
Alignm identity:
               
246
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
133, 294
               

               
Conread position:
               
261-608
               

               
Cow position:
               
chr15:44356667-44357015 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
351
               

               
Alignm identity:
               
246
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
133, 294
               

               
Conread position:
               
261-608
               

               
Cow position:
               
chr15:45708074-45707726 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
351
               

               
Alignm identity:
               
247
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
133, 294
               

               
Conread position:
               
261-608
               

               
Cow position:
               
chr15:50143036-50142688 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
351
               

               
Alignm identity:
               
248
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
133, 294
               

               
Conread position:
               
261-608
               

               
Cow position:
               
chr15:53053853-53053505 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
351
               

               
Alignm identity:
               
250
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
133, 294
               

               
Conread position:
               
262-484
               

               
Cow position:
               
chr15:4485338-4485562 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
227
               

               
Alignm identity:
               
170
               

               
Alignm E-value:
               
2e-39
               

               
Alignm gaps (pig, cow):
               
113, 84
               

               
Conread position:
               
264-606
               

               
Cow position:
               
chr15:24822180-24821840 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
349
               

               
Alignm identity:
               
256
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
183, 107
               

               
Conread position:
               
264-608
               

               
Cow position:
               
chr15:43827575-43827237 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
348
               

               
Alignm identity:
               
252
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
130, 71
               

               
Conread position:
               
266-392
               

               
Cow position:
               
chr15:36787505-36787631 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
127
               

               
Alignm identity:
               
96
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
266-423
               

               
Cow position:
               
chr15:12316125-12316282 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
162
               

               
Alignm identity:
               
121
               

               
Alignm E-value:
               
4e-23
               

               
Alignm gaps (pig, cow):
               
124, 41
               

               
Conread position:
               
266-436
               

               
Cow position:
               
chr15:2993790-2993960 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
173
               

               
Alignm identity:
               
125
               

               
Alignm E-value:
               
1e-24
               

               
Alignm gaps (pig, cow):
               
124, 74
               

               
Conread position:
               
266-515
               

               
Cow position:
               
chr15:4200411-4200159 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
253
               

               
Alignm identity:
               
178
               

               
Alignm E-value:
               
2e-37
               

               
Alignm gaps (pig, cow):
               
128, 0
               

               
Conread position:
               
266-538
               

               
Cow position:
               
chr15:23798323-23798050 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
277
               

               
Alignm identity:
               
207
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
121, 172
               

               
Conread position:
               
266-599
               

               
Cow position:
               
chr15:15865976-15865637 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
346
               

               
Alignm identity:
               
228
               

               
Alignm E-value:
               
3e-30
               

               
Alignm gaps (pig, cow):
               
124, 226
               

               
Conread position:
               
266-608
               

               
Cow position:
               
chr15:19054449-19054789 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
345
               

               
Alignm identity:
               
243
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
110, 72
               

               
Conread position:
               
266-608
               

               
Cow position:
               
chr15:44209768-44210126 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
363
               

               
Alignm identity:
               
245
               

               
Alignm E-value:
               
4e-35
               

               
Alignm gaps (pig, cow):
               
127, 149
               

               
Conread position:
               
266-608
               

               
Cow position:
               
chr15:45245346-45245017 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
346
               

               
Alignm identity:
               
250
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
124, 56
               

               
Conread position:
               
267-424
               

               
Cow position:
               
chr15:12809728-12809569 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
160
               

               
Alignm identity:
               
115
               

               
Alignm E-value:
               
3e-22
               

               
Alignm gaps (pig, cow):
               
129, 0
               

               
Conread position:
               
267-520
               

               
Cow position:
               
chr15:50991179-50991432 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
257
               

               
Alignm identity:
               
167
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
91, 123
               

               
Conread position:
               
267-552
               

               
Cow position:
               
chr15:12037399-12037691 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
294
               

               
Alignm identity:
               
200
               

               
Alignm E-value:
               
1e-33
               

               
Alignm gaps (pig, cow):
               
77, 204
               

               
Conread position:
               
267-563
               

               
Cow position:
               
chr15:7855346-7855049 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
301
               

               
Alignm identity:
               
212
               

               
Alignm E-value:
               
1.00053e-42
               

               
Alignm gaps (pig, cow):
               
109, 8
               

               
Conread position:
               
267-569
               

               
Cow position:
               
chr15:23265349-23265051 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
308
               

               
Alignm identity:
               
220
               

               
Alignm E-value:
               
9.00054e-42
               

               
Alignm gaps (pig, cow):
               
180, 96
               

               
Conread position:
               
267-575
               

               
Cow position:
               
chr15:20171941-20172250 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
313
               

               
Alignm identity:
               
218
               

               
Alignm E-value:
               
1.00053e-42
               

               
Alignm gaps (pig, cow):
               
109, 73
               

               
Conread position:
               
267-580
               

               
Cow position:
               
chr15:22713632-22713326 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
320
               

               
Alignm identity:
               
211
               

               
Alignm E-value:
               
4e-24
               

               
Alignm gaps (pig, cow):
               
123, 156
               

               
Conread position:
               
270-409
               

               
Cow position:
               
chr15:13738-13601 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
142
               

               
Alignm identity:
               
107
               

               
Alignm E-value:
               
9e-21
               

               
Alignm gaps (pig, cow):
               
123, 45
               

               
Conread position:
               
270-431
               

               
Cow position:
               
chr15:50059361-50059199 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
165
               

               
Alignm identity:
               
119
               

               
Alignm E-value:
               
3e-21
               

               
Alignm gaps (pig, cow):
               
40, 45
               

               
Conread position:
               
270-439
               

               
Cow position:
               
chr15:51831392-51831220 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
173
               

               
Alignm identity:
               
128
               

               
Alignm E-value:
               
2e-27
               

               
Alignm gaps (pig, cow):
               
94, 0
               

               
Conread position:
               
270-477
               

               
Cow position:
               
chr15:13515573-13515780 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
209
               

               
Alignm identity:
               
156
               

               
Alignm E-value:
               
6e-38
               

               
Alignm gaps (pig, cow):
               
174, 119
               

               
Conread position:
               
270-507
               

               
Cow position:
               
chr15:26896510-26896280 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
240
               

               
Alignm identity:
               
181
               

               
Alignm E-value:
               
9.00054e-42
               

               
Alignm gaps (pig, cow):
               
120, 145
               

               
Conread position:
               
270-513
               

               
Cow position:
               
chr15:25584888-25584633 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
256
               

               
Alignm identity:
               
189
               

               
Alignm E-value:
               
3.00004e-41
               

               
Alignm gaps (pig, cow):
               
120, 0
               

               
Conread position:
               
270-526
               

               
Cow position:
               
chr15:6565256-6565008 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
257
               

               
Alignm identity:
               
171
               

               
Alignm E-value:
               
5e-25
               

               
Alignm gaps (pig, cow):
               
131, 0
               

               
Conread position:
               
270-565
               

               
Cow position:
               
chr15:12359450-12359751 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
308
               

               
Alignm identity:
               
225
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
148, 119
               

               
Conread position:
               
270-594
               

               
Cow position:
               
chr15:27863122-27862807 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
327
               

               
Alignm identity:
               
228
               

               
Alignm E-value:
               
9.00054e-42
               

               
Alignm gaps (pig, cow):
               
66, 122
               

               
Conread position:
               
270-599
               

               
Cow position:
               
chr15:22532442-22532770 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
340
               

               
Alignm identity:
               
252
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
120, 167
               

               
Conread position:
               
270-600
               

               
Cow position:
               
chr15:35041669-35041339 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
335
               

               
Alignm identity:
               
227
               

               
Alignm E-value:
               
3.00004e-41
               

               
Alignm gaps (pig, cow):
               
268, 124
               

               
Conread position:
               
270-608
               

               
Cow position:
               
chr15:6970187-6970517 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
340
               

               
Alignm identity:
               
261
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
43, 37
               

               
Conread position:
               
270-608
               

               
Cow position:
               
chr15:16741836-16741487 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
352
               

               
Alignm identity:
               
234
               

               
Alignm E-value:
               
5e-36
               

               
Alignm gaps (pig, cow):
               
120, 160
               

               
Conread position:
               
270-608
               

               
Cow position:
               
chr15:25208564-25208227 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
345
               

               
Alignm identity:
               
263
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
120, 163
               

               
Conread position:
               
270-608
               

               
Cow position:
               
chr15:36422858-36423186 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
343
               

               
Alignm identity:
               
235
               

               
Alignm E-value:
               
2e-38
               

               
Alignm gaps (pig, cow):
               
176, 142
               

               
Conread position:
               
270-608
               

               
Cow position:
               
chr15:38984442-38984103 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
342
               

               
Alignm identity:
               
246
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
103, 269
               

               
Conread position:
               
270-608
               

               
Cow position:
               
chr15:41087661-41087324 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
341
               

               
Alignm identity:
               
253
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
128, 266
               

               
Conread position:
               
272-493
               

               
Cow position:
               
chr15:50444502-50444278 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
225
               

               
Alignm identity:
               
158
               

               
Alignm E-value:
               
9e-32
               

               
Alignm gaps (pig, cow):
               
122, 0
               

               
Conread position:
               
272-531
               

               
Cow position:
               
chr15:11270416-11270154 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
263
               

               
Alignm identity:
               
186
               

               
Alignm E-value:
               
2e-40
               

               
Alignm gaps (pig, cow):
               
122, 0
               

               
Conread position:
               
272-545
               

               
Cow position:
               
chr15:11399028-11398752 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
277
               

               
Alignm identity:
               
198
               

               
Alignm E-value:
               
9.80909e-45
               

               
Alignm gaps (pig, cow):
               
104, 0
               

               
Conread position:
               
272-545
               

               
Cow position:
               
chr15:50323262-50323538 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
277
               

               
Alignm identity:
               
198
               

               
Alignm E-value:
               
4.2039e-45
               

               
Alignm gaps (pig, cow):
               
122, 0
               

               
Conread position:
               
272-598
               

               
Cow position:
               
chr15:25164343-25164665 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
328
               

               
Alignm identity:
               
235
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
172, 64
               

               
Conread position:
               
272-607
               

               
Cow position:
               
chr15:5639826-5640161 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
339
               

               
Alignm identity:
               
239
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
104, 114
               

               
Conread position:
               
272-607
               

               
Cow position:
               
chr15:37716718-37716400 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
337
               

               
Alignm identity:
               
251
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
114, 107
               

               
Conread position:
               
272-608
               

               
Cow position:
               
chr15:7578923-7578587 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
339
               

               
Alignm identity:
               
252
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
104, 271
               

               
Conread position:
               
272-608
               

               
Cow position:
               
chr15:11595620-11595953 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
340
               

               
Alignm identity:
               
235
               

               
Alignm E-value:
               
4.2039e-45
               

               
Alignm gaps (pig, cow):
               
122, 235
               

               
Conread position:
               
272-608
               

               
Cow position:
               
chr15:21152055-21152392 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
340
               

               
Alignm identity:
               
246
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
122, 283
               

               
Conread position:
               
272-608
               

               
Cow position:
               
chr15:21908644-21908981 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
340
               

               
Alignm identity:
               
243
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
122, 286
               

               
Conread position:
               
272-608
               

               
Cow position:
               
chr15:25539821-25540158 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
341
               

               
Alignm identity:
               
240
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
122, 169
               

               
Conread position:
               
272-608
               

               
Cow position:
               
chr15:28981669-28982006 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
340
               

               
Alignm identity:
               
246
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
122, 283
               

               
Conread position:
               
272-608
               

               
Cow position:
               
chr15:33754087-33753750 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
340
               

               
Alignm identity:
               
244
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
122, 283
               

               
Conread position:
               
275-491
               

               
Cow position:
               
chr15:9428923-9428706 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
220
               

               
Alignm identity:
               
151
               

               
Alignm E-value:
               
2e-25
               

               
Alignm gaps (pig, cow):
               
98, 200
               

               
Conread position:
               
275-608
               

               
Cow position:
               
chr15:1775208-1774875 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
337
               

               
Alignm identity:
               
237
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
119, 269
               

               
Conread position:
               
275-608
               

               
Cow position:
               
chr15:3719641-3719975 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
337
               

               
Alignm identity:
               
238
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
119, 280
               

               
Conread position:
               
275-608
               

               
Cow position:
               
chr15:37744815-37744482 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
337
               

               
Alignm identity:
               
235
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
119, 87
               
Show alignments to all cow chromosomes.