Cow genome map

Conread name: Pig4-TMW8004P22

Conread position: 214-608
Cow position: chrX:7118673-7119068 (view UCSC Genome Browser custom track)
Alignm length: 398
Alignm identity: 247
Alignm E-value: 0
Alignm gaps (pig, cow): 180, 341

Conread position: 215-546
Cow position: chrX:30950497-30950164 (view UCSC Genome Browser custom track)
Alignm length: 335
Alignm identity: 201
Alignm E-value: 2.99878e-43
Alignm gaps (pig, cow): 179, 55

Conread position: 222-608
Cow position: chrX:27590075-27590457 (view UCSC Genome Browser custom track)
Alignm length: 391
Alignm identity: 267
Alignm E-value: 0
Alignm gaps (pig, cow): 24, 218

Conread position: 225-589
Cow position: chrX:9970878-9970518 (view UCSC Genome Browser custom track)
Alignm length: 372
Alignm identity: 241
Alignm E-value: 2e-30
Alignm gaps (pig, cow): 35, 46

Conread position: 232-608
Cow position: chrX:29289526-29289152 (view UCSC Genome Browser custom track)
Alignm length: 380
Alignm identity: 274
Alignm E-value: 0
Alignm gaps (pig, cow): 158, 16

Conread position: 238-573
Cow position: chrX:21063165-21062828 (view UCSC Genome Browser custom track)
Alignm length: 341
Alignm identity: 234
Alignm E-value: 9.94922e-44
Alignm gaps (pig, cow): 9, 240

Conread position: 238-608
Cow position: chrX:2944919-2945294 (view UCSC Genome Browser custom track)
Alignm length: 378
Alignm identity: 261
Alignm E-value: 0
Alignm gaps (pig, cow): 11, 309

Conread position: 247-607
Cow position: chrX:22811824-22811463 (view UCSC Genome Browser custom track)
Alignm length: 364
Alignm identity: 265
Alignm E-value: 0
Alignm gaps (pig, cow): 9, 297

Conread position: 251-514
Cow position: chrX:2812478-2812742 (view UCSC Genome Browser custom track)
Alignm length: 267
Alignm identity: 182
Alignm E-value: 1e-32
Alignm gaps (pig, cow): 143, 219

Conread position: 251-525
Cow position: chrX:23216041-23215764 (view UCSC Genome Browser custom track)
Alignm length: 278
Alignm identity: 193
Alignm E-value: 2e-39
Alignm gaps (pig, cow): 125, 0

Conread position: 251-546
Cow position: chrX:15577707-15578005 (view UCSC Genome Browser custom track)
Alignm length: 299
Alignm identity: 206
Alignm E-value: 3.00018e-42
Alignm gaps (pig, cow): 143, 0

Conread position: 251-566
Cow position: chrX:44852028-44851709 (view UCSC Genome Browser custom track)
Alignm length: 323
Alignm identity: 219
Alignm E-value: 5e-38
Alignm gaps (pig, cow): 125, 243

Conread position: 251-567
Cow position: chrX:47385998-47386314 (view UCSC Genome Browser custom track)
Alignm length: 322
Alignm identity: 216
Alignm E-value: 1e-34
Alignm gaps (pig, cow): 125, 182

Conread position: 251-594
Cow position: chrX:13971293-13971637 (view UCSC Genome Browser custom track)
Alignm length: 347
Alignm identity: 244
Alignm E-value: 0
Alignm gaps (pig, cow): 143, 293

Conread position: 251-598
Cow position: chrX:2274851-2274503 (view UCSC Genome Browser custom track)
Alignm length: 351
Alignm identity: 246
Alignm E-value: 0
Alignm gaps (pig, cow): 143, 304

Conread position: 251-598
Cow position: chrX:39559719-39560066 (view UCSC Genome Browser custom track)
Alignm length: 350
Alignm identity: 251
Alignm E-value: 0
Alignm gaps (pig, cow): 125, 303

Conread position: 251-598
Cow position: chrX:46297594-46297246 (view UCSC Genome Browser custom track)
Alignm length: 351
Alignm identity: 247
Alignm E-value: 0
Alignm gaps (pig, cow): 143, 304

Conread position: 251-607
Cow position: chrX:10351795-10351438 (view UCSC Genome Browser custom track)
Alignm length: 360
Alignm identity: 251
Alignm E-value: 0
Alignm gaps (pig, cow): 143, 304

Conread position: 251-607
Cow position: chrX:26759635-26759991 (view UCSC Genome Browser custom track)
Alignm length: 360
Alignm identity: 256
Alignm E-value: 0
Alignm gaps (pig, cow): 143, 274

Conread position: 251-607
Cow position: chrX:31977912-31978266 (view UCSC Genome Browser custom track)
Alignm length: 360
Alignm identity: 251
Alignm E-value: 0
Alignm gaps (pig, cow): 143, 210

Conread position: 251-608
Cow position: chrX:4869477-4869134 (view UCSC Genome Browser custom track)
Alignm length: 361
Alignm identity: 246
Alignm E-value: 7e-40
Alignm gaps (pig, cow): 118, 237

Conread position: 251-608
Cow position: chrX:12146028-12145671 (view UCSC Genome Browser custom track)
Alignm length: 362
Alignm identity: 254
Alignm E-value: 0
Alignm gaps (pig, cow): 143, 174

Conread position: 251-608
Cow position: chrX:14121818-14122175 (view UCSC Genome Browser custom track)
Alignm length: 361
Alignm identity: 250
Alignm E-value: 0
Alignm gaps (pig, cow): 143, 248

Conread position: 251-608
Cow position: chrX:16466235-16465876 (view UCSC Genome Browser custom track)
Alignm length: 363
Alignm identity: 254
Alignm E-value: 0
Alignm gaps (pig, cow): 122, 142

Conread position: 251-608
Cow position: chrX:20742920-20742562 (view UCSC Genome Browser custom track)
Alignm length: 361
Alignm identity: 254
Alignm E-value: 0
Alignm gaps (pig, cow): 125, 304

Conread position: 251-608
Cow position: chrX:21686548-21686196 (view UCSC Genome Browser custom track)
Alignm length: 361
Alignm identity: 245
Alignm E-value: 2.94273e-44
Alignm gaps (pig, cow): 125, 165

Conread position: 251-608
Cow position: chrX:22078261-22077903 (view UCSC Genome Browser custom track)
Alignm length: 361
Alignm identity: 254
Alignm E-value: 0
Alignm gaps (pig, cow): 143, 304

Conread position: 251-608
Cow position: chrX:26276073-26275715 (view UCSC Genome Browser custom track)
Alignm length: 361
Alignm identity: 256
Alignm E-value: 0
Alignm gaps (pig, cow): 143, 304

Conread position: 251-608
Cow position: chrX:45237400-45237042 (view UCSC Genome Browser custom track)
Alignm length: 361
Alignm identity: 252
Alignm E-value: 0
Alignm gaps (pig, cow): 143, 307

Conread position: 254-607
Cow position: chrX:16711885-16711531 (view UCSC Genome Browser custom track)
Alignm length: 357
Alignm identity: 258
Alignm E-value: 0
Alignm gaps (pig, cow): 122, 290

Conread position: 255-521
Cow position: chrX:2425192-2425461 (view UCSC Genome Browser custom track)
Alignm length: 270
Alignm identity: 197
Alignm E-value: 0
Alignm gaps (pig, cow): 121, 0

Conread position: 255-578
Cow position: chrX:32583883-32584205 (view UCSC Genome Browser custom track)
Alignm length: 327
Alignm identity: 235
Alignm E-value: 0
Alignm gaps (pig, cow): 121, 280

Conread position: 255-607
Cow position: chrX:20877833-20878185 (view UCSC Genome Browser custom track)
Alignm length: 356
Alignm identity: 259
Alignm E-value: 0
Alignm gaps (pig, cow): 121, 271

Conread position: 255-608
Cow position: chrX:1550880-1550526 (view UCSC Genome Browser custom track)
Alignm length: 357
Alignm identity: 258
Alignm E-value: 0
Alignm gaps (pig, cow): 121, 284

Conread position: 255-608
Cow position: chrX:2478698-2479051 (view UCSC Genome Browser custom track)
Alignm length: 357
Alignm identity: 252
Alignm E-value: 0
Alignm gaps (pig, cow): 121, 157

Conread position: 255-608
Cow position: chrX:21227399-21227050 (view UCSC Genome Browser custom track)
Alignm length: 358
Alignm identity: 259
Alignm E-value: 0
Alignm gaps (pig, cow): 135, 52

Conread position: 255-608
Cow position: chrX:24441317-24441674 (view UCSC Genome Browser custom track)
Alignm length: 361
Alignm identity: 257
Alignm E-value: 0
Alignm gaps (pig, cow): 121, 275

Conread position: 255-608
Cow position: chrX:30228181-30228534 (view UCSC Genome Browser custom track)
Alignm length: 357
Alignm identity: 256
Alignm E-value: 0
Alignm gaps (pig, cow): 121, 227

Conread position: 257-436
Cow position: chrX:35258804-35258981 (view UCSC Genome Browser custom track)
Alignm length: 181
Alignm identity: 129
Alignm E-value: 4e-24
Alignm gaps (pig, cow): 119, 138

Conread position: 257-608
Cow position: chrX:44087233-44086880 (view UCSC Genome Browser custom track)
Alignm length: 356
Alignm identity: 256
Alignm E-value: 0
Alignm gaps (pig, cow): 129, 283

Conread position: 258-460
Cow position: chrX:34175271-34175476 (view UCSC Genome Browser custom track)
Alignm length: 206
Alignm identity: 138
Alignm E-value: 9e-22
Alignm gaps (pig, cow): 136, 0

Conread position: 258-465
Cow position: chrX:17605634-17605844 (view UCSC Genome Browser custom track)
Alignm length: 211
Alignm identity: 141
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 136, 0

Conread position: 258-468
Cow position: chrX:16807828-16808042 (view UCSC Genome Browser custom track)
Alignm length: 215
Alignm identity: 148
Alignm E-value: 5e-26
Alignm gaps (pig, cow): 136, 0

Conread position: 258-478
Cow position: chrX:43984101-43983874 (view UCSC Genome Browser custom track)
Alignm length: 228
Alignm identity: 152
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 16, 0

Conread position: 258-481
Cow position: chrX:14222006-14221784 (view UCSC Genome Browser custom track)
Alignm length: 226
Alignm identity: 159
Alignm E-value: 7e-30
Alignm gaps (pig, cow): 107, 113

Conread position: 258-496
Cow position: chrX:42166002-42165761 (view UCSC Genome Browser custom track)
Alignm length: 242
Alignm identity: 168
Alignm E-value: 1e-32
Alignm gaps (pig, cow): 118, 0

Conread position: 258-511
Cow position: chrX:16783414-16783165 (view UCSC Genome Browser custom track)
Alignm length: 255
Alignm identity: 180
Alignm E-value: 1e-36
Alignm gaps (pig, cow): 189, 57

Conread position: 258-515
Cow position: chrX:13196044-13196304 (view UCSC Genome Browser custom track)
Alignm length: 261
Alignm identity: 180
Alignm E-value: 1e-35
Alignm gaps (pig, cow): 136, 0

Conread position: 258-526
Cow position: chrX:24757770-24758041 (view UCSC Genome Browser custom track)
Alignm length: 272
Alignm identity: 188
Alignm E-value: 5e-38
Alignm gaps (pig, cow): 136, 0

Conread position: 258-530
Cow position: chrX:34333273-34333548 (view UCSC Genome Browser custom track)
Alignm length: 276
Alignm identity: 196
Alignm E-value: 9.94922e-44
Alignm gaps (pig, cow): 136, 0

Conread position: 258-530
Cow position: chrX:36820305-36820580 (view UCSC Genome Browser custom track)
Alignm length: 276
Alignm identity: 192
Alignm E-value: 7e-40
Alignm gaps (pig, cow): 136, 0

Conread position: 258-542
Cow position: chrX:47170767-47170481 (view UCSC Genome Browser custom track)
Alignm length: 288
Alignm identity: 187
Alignm E-value: 6e-28
Alignm gaps (pig, cow): 118, 266

Conread position: 258-546
Cow position: chrX:29508704-29508419 (view UCSC Genome Browser custom track)
Alignm length: 292
Alignm identity: 202
Alignm E-value: 5e-38
Alignm gaps (pig, cow): 136, 157

Conread position: 258-546
Cow position: chrX:30538225-30538516 (view UCSC Genome Browser custom track)
Alignm length: 292
Alignm identity: 204
Alignm E-value: 9.94922e-44
Alignm gaps (pig, cow): 136, 0

Conread position: 258-573
Cow position: chrX:5739286-5739602 (view UCSC Genome Browser custom track)
Alignm length: 319
Alignm identity: 222
Alignm E-value: 0
Alignm gaps (pig, cow): 118, 297

Conread position: 258-574
Cow position: chrX:25741187-25741504 (view UCSC Genome Browser custom track)
Alignm length: 320
Alignm identity: 227
Alignm E-value: 0
Alignm gaps (pig, cow): 118, 286

Conread position: 258-578
Cow position: chrX:5112629-5112950 (view UCSC Genome Browser custom track)
Alignm length: 324
Alignm identity: 228
Alignm E-value: 0
Alignm gaps (pig, cow): 136, 297

Conread position: 258-578
Cow position: chrX:15560887-15561209 (view UCSC Genome Browser custom track)
Alignm length: 327
Alignm identity: 231
Alignm E-value: 0
Alignm gaps (pig, cow): 121, 107

Conread position: 258-581
Cow position: chrX:31449695-31450017 (view UCSC Genome Browser custom track)
Alignm length: 327
Alignm identity: 228
Alignm E-value: 0
Alignm gaps (pig, cow): 118, 293

Conread position: 258-584
Cow position: chrX:24125145-24125462 (view UCSC Genome Browser custom track)
Alignm length: 329
Alignm identity: 227
Alignm E-value: 3.00018e-42
Alignm gaps (pig, cow): 118, 235

Conread position: 258-586
Cow position: chrX:7053808-7054134 (view UCSC Genome Browser custom track)
Alignm length: 333
Alignm identity: 236
Alignm E-value: 0
Alignm gaps (pig, cow): 15, 174

Conread position: 258-598
Cow position: chrX:1576336-1576677 (view UCSC Genome Browser custom track)
Alignm length: 345
Alignm identity: 245
Alignm E-value: 0
Alignm gaps (pig, cow): 136, 283

Conread position: 258-607
Cow position: chrX:14819641-14819289 (view UCSC Genome Browser custom track)
Alignm length: 355
Alignm identity: 244
Alignm E-value: 0
Alignm gaps (pig, cow): 76, 299

Conread position: 258-607
Cow position: chrX:15119962-15120311 (view UCSC Genome Browser custom track)
Alignm length: 353
Alignm identity: 248
Alignm E-value: 0
Alignm gaps (pig, cow): 118, 281

Conread position: 258-607
Cow position: chrX:16074503-16074165 (view UCSC Genome Browser custom track)
Alignm length: 353
Alignm identity: 243
Alignm E-value: 8.99634e-43
Alignm gaps (pig, cow): 118, 254

Conread position: 258-607
Cow position: chrX:17783426-17783076 (view UCSC Genome Browser custom track)
Alignm length: 354
Alignm identity: 247
Alignm E-value: 0
Alignm gaps (pig, cow): 136, 183

Conread position: 258-607
Cow position: chrX:21768731-21768381 (view UCSC Genome Browser custom track)
Alignm length: 353
Alignm identity: 247
Alignm E-value: 0
Alignm gaps (pig, cow): 136, 297

Conread position: 258-607
Cow position: chrX:25458710-25459060 (view UCSC Genome Browser custom track)
Alignm length: 353
Alignm identity: 248
Alignm E-value: 0
Alignm gaps (pig, cow): 132, 289

Conread position: 258-607
Cow position: chrX:27759634-27759284 (view UCSC Genome Browser custom track)
Alignm length: 353
Alignm identity: 250
Alignm E-value: 0
Alignm gaps (pig, cow): 118, 297

Conread position: 258-607
Cow position: chrX:28555508-28555858 (view UCSC Genome Browser custom track)
Alignm length: 353
Alignm identity: 246
Alignm E-value: 0
Alignm gaps (pig, cow): 136, 297

Conread position: 258-607
Cow position: chrX:31813962-31814312 (view UCSC Genome Browser custom track)
Alignm length: 353
Alignm identity: 248
Alignm E-value: 0
Alignm gaps (pig, cow): 111, 297

Conread position: 258-608
Cow position: chrX:3361745-3361397 (view UCSC Genome Browser custom track)
Alignm length: 353
Alignm identity: 254
Alignm E-value: 0
Alignm gaps (pig, cow): 118, 296

Conread position: 258-608
Cow position: chrX:3371931-3372277 (view UCSC Genome Browser custom track)
Alignm length: 354
Alignm identity: 248
Alignm E-value: 0
Alignm gaps (pig, cow): 134, 201

Conread position: 258-608
Cow position: chrX:5333894-5334243 (view UCSC Genome Browser custom track)
Alignm length: 352
Alignm identity: 247
Alignm E-value: 0
Alignm gaps (pig, cow): 136, 295

Conread position: 258-608
Cow position: chrX:7486791-7486440 (view UCSC Genome Browser custom track)
Alignm length: 355
Alignm identity: 248
Alignm E-value: 0
Alignm gaps (pig, cow): 136, 183

Conread position: 258-608
Cow position: chrX:9128983-9128632 (view UCSC Genome Browser custom track)
Alignm length: 354
Alignm identity: 245
Alignm E-value: 0
Alignm gaps (pig, cow): 136, 297

Conread position: 258-608
Cow position: chrX:13385334-13384983 (view UCSC Genome Browser custom track)
Alignm length: 354
Alignm identity: 245
Alignm E-value: 0
Alignm gaps (pig, cow): 136, 297

Conread position: 258-608
Cow position: chrX:14163118-14162767 (view UCSC Genome Browser custom track)
Alignm length: 354
Alignm identity: 246
Alignm E-value: 0
Alignm gaps (pig, cow): 118, 281

Conread position: 258-608
Cow position: chrX:16279576-16279225 (view UCSC Genome Browser custom track)
Alignm length: 354
Alignm identity: 243
Alignm E-value: 0
Alignm gaps (pig, cow): 136, 297

Conread position: 258-608
Cow position: chrX:22608665-22609016 (view UCSC Genome Browser custom track)
Alignm length: 354
Alignm identity: 250
Alignm E-value: 0
Alignm gaps (pig, cow): 136, 297

Conread position: 258-608
Cow position: chrX:22888586-22888234 (view UCSC Genome Browser custom track)
Alignm length: 355
Alignm identity: 254
Alignm E-value: 0
Alignm gaps (pig, cow): 118, 298

Conread position: 258-608
Cow position: chrX:23987171-23986824 (view UCSC Genome Browser custom track)
Alignm length: 354
Alignm identity: 248
Alignm E-value: 0
Alignm gaps (pig, cow): 118, 201

Conread position: 258-608
Cow position: chrX:24809044-24809394 (view UCSC Genome Browser custom track)
Alignm length: 354
Alignm identity: 247
Alignm E-value: 0
Alignm gaps (pig, cow): 136, 101

Conread position: 258-608
Cow position: chrX:27627282-27626931 (view UCSC Genome Browser custom track)
Alignm length: 354
Alignm identity: 249
Alignm E-value: 0
Alignm gaps (pig, cow): 136, 286

Conread position: 258-608
Cow position: chrX:29226403-29226052 (view UCSC Genome Browser custom track)
Alignm length: 354
Alignm identity: 247
Alignm E-value: 0
Alignm gaps (pig, cow): 136, 297

Conread position: 258-608
Cow position: chrX:30752701-30752350 (view UCSC Genome Browser custom track)
Alignm length: 354
Alignm identity: 250
Alignm E-value: 0
Alignm gaps (pig, cow): 136, 297

Conread position: 258-608
Cow position: chrX:30981238-30981588 (view UCSC Genome Browser custom track)
Alignm length: 355
Alignm identity: 247
Alignm E-value: 0
Alignm gaps (pig, cow): 136, 283

Conread position: 258-608
Cow position: chrX:37764270-37764621 (view UCSC Genome Browser custom track)
Alignm length: 354
Alignm identity: 246
Alignm E-value: 0
Alignm gaps (pig, cow): 118, 297

Conread position: 259-455
Cow position: chrX:37416151-37416348 (view UCSC Genome Browser custom track)
Alignm length: 200
Alignm identity: 143
Alignm E-value: 6e-28
Alignm gaps (pig, cow): 131, 55

Conread position: 259-509
Cow position: chrX:42855334-42855084 (view UCSC Genome Browser custom track)
Alignm length: 254
Alignm identity: 198
Alignm E-value: 0
Alignm gaps (pig, cow): 131, 173

Conread position: 259-546
Cow position: chrX:47361960-47362250 (view UCSC Genome Browser custom track)
Alignm length: 291
Alignm identity: 207
Alignm E-value: 0
Alignm gaps (pig, cow): 116, 0

Conread position: 259-607
Cow position: chrX:10412064-10412395 (view UCSC Genome Browser custom track)
Alignm length: 351
Alignm identity: 265
Alignm E-value: 0
Alignm gaps (pig, cow): 116, 10

Conread position: 259-608
Cow position: chrX:30823442-30823092 (view UCSC Genome Browser custom track)
Alignm length: 354
Alignm identity: 250
Alignm E-value: 0
Alignm gaps (pig, cow): 117, 175

Conread position: 260-420
Cow position: chrX:17662673-17662834 (view UCSC Genome Browser custom track)
Alignm length: 163
Alignm identity: 121
Alignm E-value: 5e-26
Alignm gaps (pig, cow): 131, 10

Conread position: 260-423
Cow position: chrX:9954066-9953901 (view UCSC Genome Browser custom track)
Alignm length: 166
Alignm identity: 118
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 134, 0

Conread position: 260-423
Cow position: chrX:38642181-38642020 (view UCSC Genome Browser custom track)
Alignm length: 164
Alignm identity: 124
Alignm E-value: 6e-29
Alignm gaps (pig, cow): 10, 0

Conread position: 260-423
Cow position: chrX:41884494-41884658 (view UCSC Genome Browser custom track)
Alignm length: 166
Alignm identity: 119
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 136, 13

Conread position: 260-463
Cow position: chrX:42874904-42874697 (view UCSC Genome Browser custom track)
Alignm length: 208
Alignm identity: 161
Alignm E-value: 8.00001e-42
Alignm gaps (pig, cow): 11, 0

Conread position: 260-468
Cow position: chrX:46722814-46723027 (view UCSC Genome Browser custom track)
Alignm length: 214
Alignm identity: 157
Alignm E-value: 1e-34
Alignm gaps (pig, cow): 14, 0

Conread position: 260-542
Cow position: chrX:11717864-11718138 (view UCSC Genome Browser custom track)
Alignm length: 284
Alignm identity: 219
Alignm E-value: 0
Alignm gaps (pig, cow): 184, 6

Conread position: 260-542
Cow position: chrX:29877256-29877541 (view UCSC Genome Browser custom track)
Alignm length: 286
Alignm identity: 199
Alignm E-value: 8.00001e-42
Alignm gaps (pig, cow): 134, 0

Conread position: 260-562
Cow position: chrX:41743832-41743535 (view UCSC Genome Browser custom track)
Alignm length: 305
Alignm identity: 226
Alignm E-value: 0
Alignm gaps (pig, cow): 130, 49

Conread position: 260-575
Cow position: chrX:32978333-32978648 (view UCSC Genome Browser custom track)
Alignm length: 320
Alignm identity: 250
Alignm E-value: 0
Alignm gaps (pig, cow): 115, 10

Conread position: 260-589
Cow position: chrX:23583483-23583153 (view UCSC Genome Browser custom track)
Alignm length: 333
Alignm identity: 250
Alignm E-value: 0
Alignm gaps (pig, cow): 130, 295

Conread position: 260-597
Cow position: chrX:27106183-27105845 (view UCSC Genome Browser custom track)
Alignm length: 341
Alignm identity: 254
Alignm E-value: 0
Alignm gaps (pig, cow): 129, 302

Conread position: 260-598
Cow position: chrX:24768938-24769274 (view UCSC Genome Browser custom track)
Alignm length: 341
Alignm identity: 247
Alignm E-value: 0
Alignm gaps (pig, cow): 13, 119

Conread position: 260-606
Cow position: chrX:35387982-35388329 (view UCSC Genome Browser custom track)
Alignm length: 351
Alignm identity: 263
Alignm E-value: 0
Alignm gaps (pig, cow): 137, 10

Conread position: 260-607
Cow position: chrX:21593208-21592863 (view UCSC Genome Browser custom track)
Alignm length: 352
Alignm identity: 279
Alignm E-value: 0
Alignm gaps (pig, cow): 126, 173

Conread position: 260-607
Cow position: chrX:38094601-38094948 (view UCSC Genome Browser custom track)
Alignm length: 351
Alignm identity: 272
Alignm E-value: 0
Alignm gaps (pig, cow): 9, 91

Conread position: 260-608
Cow position: chrX:1616124-1616481 (view UCSC Genome Browser custom track)
Alignm length: 359
Alignm identity: 272
Alignm E-value: 0
Alignm gaps (pig, cow): 130, 10

Conread position: 260-608
Cow position: chrX:5288761-5289111 (view UCSC Genome Browser custom track)
Alignm length: 353
Alignm identity: 253
Alignm E-value: 0
Alignm gaps (pig, cow): 13, 296

Conread position: 260-608
Cow position: chrX:5893153-5892804 (view UCSC Genome Browser custom track)
Alignm length: 352
Alignm identity: 252
Alignm E-value: 0
Alignm gaps (pig, cow): 134, 295

Conread position: 260-608
Cow position: chrX:15007229-15007575 (view UCSC Genome Browser custom track)
Alignm length: 352
Alignm identity: 273
Alignm E-value: 0
Alignm gaps (pig, cow): 136, 77

Conread position: 260-608
Cow position: chrX:18897731-18898075 (view UCSC Genome Browser custom track)
Alignm length: 350
Alignm identity: 255
Alignm E-value: 0
Alignm gaps (pig, cow): 187, 102

Conread position: 260-608
Cow position: chrX:23563870-23564221 (view UCSC Genome Browser custom track)
Alignm length: 354
Alignm identity: 267
Alignm E-value: 0
Alignm gaps (pig, cow): 14, 272

Conread position: 260-608
Cow position: chrX:24968891-24969240 (view UCSC Genome Browser custom track)
Alignm length: 352
Alignm identity: 244
Alignm E-value: 0
Alignm gaps (pig, cow): 134, 298

Conread position: 260-608
Cow position: chrX:34754267-34754616 (view UCSC Genome Browser custom track)
Alignm length: 352
Alignm identity: 268
Alignm E-value: 0
Alignm gaps (pig, cow): 130, 291

Conread position: 260-608
Cow position: chrX:38439398-38439052 (view UCSC Genome Browser custom track)
Alignm length: 353
Alignm identity: 274
Alignm E-value: 0
Alignm gaps (pig, cow): 115, 10

Conread position: 260-608
Cow position: chrX:40452289-40452644 (view UCSC Genome Browser custom track)
Alignm length: 358
Alignm identity: 274
Alignm E-value: 0
Alignm gaps (pig, cow): 125, 10

Conread position: 260-608
Cow position: chrX:40544683-40545034 (view UCSC Genome Browser custom track)
Alignm length: 354
Alignm identity: 257
Alignm E-value: 0
Alignm gaps (pig, cow): 109, 286

Conread position: 261-423
Cow position: chrX:619085-619248 (view UCSC Genome Browser custom track)
Alignm length: 165
Alignm identity: 125
Alignm E-value: 6e-29
Alignm gaps (pig, cow): 129, 9

Conread position: 261-423
Cow position: chrX:21672475-21672311 (view UCSC Genome Browser custom track)
Alignm length: 165
Alignm identity: 122
Alignm E-value: 5e-27
Alignm gaps (pig, cow): 129, 0

Conread position: 261-452
Cow position: chrX:19333245-19333439 (view UCSC Genome Browser custom track)
Alignm length: 195
Alignm identity: 132
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 133, 0

Conread position: 261-455
Cow position: chrX:40183424-40183623 (view UCSC Genome Browser custom track)
Alignm length: 200
Alignm identity: 154
Alignm E-value: 2e-38
Alignm gaps (pig, cow): 12, 0

Conread position: 261-460
Cow position: chrX:23702841-23703043 (view UCSC Genome Browser custom track)
Alignm length: 204
Alignm identity: 140
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 133, 180

Conread position: 261-460
Cow position: chrX:26709528-26709326 (view UCSC Genome Browser custom track)
Alignm length: 203
Alignm identity: 136
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 133, 0

Conread position: 261-472
Cow position: chrX:24904008-24903794 (view UCSC Genome Browser custom track)
Alignm length: 216
Alignm identity: 148
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 126, 97

Conread position: 261-478
Cow position: chrX:754882-754662 (view UCSC Genome Browser custom track)
Alignm length: 221
Alignm identity: 157
Alignm E-value: 1e-32
Alignm gaps (pig, cow): 129, 0

Conread position: 261-479
Cow position: chrX:35498010-35497789 (view UCSC Genome Browser custom track)
Alignm length: 222
Alignm identity: 152
Alignm E-value: 2e-27
Alignm gaps (pig, cow): 133, 0

Conread position: 261-482
Cow position: chrX:33020405-33020186 (view UCSC Genome Browser custom track)
Alignm length: 224
Alignm identity: 177
Alignm E-value: 0
Alignm gaps (pig, cow): 129, 44

Conread position: 261-493
Cow position: chrX:12032895-12032660 (view UCSC Genome Browser custom track)
Alignm length: 236
Alignm identity: 163
Alignm E-value: 3e-31
Alignm gaps (pig, cow): 133, 0

Conread position: 261-495
Cow position: chrX:4404459-4404222 (view UCSC Genome Browser custom track)
Alignm length: 238
Alignm identity: 163
Alignm E-value: 2e-30
Alignm gaps (pig, cow): 133, 0

Conread position: 261-499
Cow position: chrX:39667269-39667510 (view UCSC Genome Browser custom track)
Alignm length: 242
Alignm identity: 167
Alignm E-value: 3e-32
Alignm gaps (pig, cow): 133, 0

Conread position: 261-501
Cow position: chrX:3658130-3658373 (view UCSC Genome Browser custom track)
Alignm length: 244
Alignm identity: 171
Alignm E-value: 4e-35
Alignm gaps (pig, cow): 133, 0

Conread position: 261-501
Cow position: chrX:27469730-27469973 (view UCSC Genome Browser custom track)
Alignm length: 244
Alignm identity: 172
Alignm E-value: 4e-36
Alignm gaps (pig, cow): 133, 0

Conread position: 261-508
Cow position: chrX:15008508-15008758 (view UCSC Genome Browser custom track)
Alignm length: 251
Alignm identity: 179
Alignm E-value: 2e-39
Alignm gaps (pig, cow): 133, 0

Conread position: 261-511
Cow position: chrX:29844552-29844805 (view UCSC Genome Browser custom track)
Alignm length: 254
Alignm identity: 179
Alignm E-value: 5e-38
Alignm gaps (pig, cow): 133, 0

Conread position: 261-515
Cow position: chrX:23452674-23452931 (view UCSC Genome Browser custom track)
Alignm length: 258
Alignm identity: 182
Alignm E-value: 6e-39
Alignm gaps (pig, cow): 133, 0

Conread position: 261-516
Cow position: chrX:1749585-1749843 (view UCSC Genome Browser custom track)
Alignm length: 259
Alignm identity: 142
Alignm E-value: 4e-24
Alignm gaps (pig, cow): 133, 0

Conread position: 261-522
Cow position: chrX:30686669-30686936 (view UCSC Genome Browser custom track)
Alignm length: 268
Alignm identity: 187
Alignm E-value: 1e-36
Alignm gaps (pig, cow): 80, 0

Conread position: 261-529
Cow position: chrX:24967193-24966922 (view UCSC Genome Browser custom track)
Alignm length: 272
Alignm identity: 190
Alignm E-value: 7e-40
Alignm gaps (pig, cow): 133, 0

Conread position: 261-530
Cow position: chrX:11860318-11860590 (view UCSC Genome Browser custom track)
Alignm length: 273
Alignm identity: 195
Alignm E-value: 2.94273e-44
Alignm gaps (pig, cow): 133, 0

Conread position: 261-530
Cow position: chrX:14846150-14846422 (view UCSC Genome Browser custom track)
Alignm length: 273
Alignm identity: 200
Alignm E-value: 0
Alignm gaps (pig, cow): 115, 0

Conread position: 261-530
Cow position: chrX:35803738-35803466 (view UCSC Genome Browser custom track)
Alignm length: 273
Alignm identity: 195
Alignm E-value: 2.94273e-44
Alignm gaps (pig, cow): 133, 0

Conread position: 261-531
Cow position: chrX:24577641-24577914 (view UCSC Genome Browser custom track)
Alignm length: 274
Alignm identity: 154
Alignm E-value: 2e-28
Alignm gaps (pig, cow): 133, 0

Conread position: 261-542
Cow position: chrX:39731437-39731153 (view UCSC Genome Browser custom track)
Alignm length: 285
Alignm identity: 199
Alignm E-value: 3.00018e-42
Alignm gaps (pig, cow): 133, 0

Conread position: 261-545
Cow position: chrX:43767613-43767899 (view UCSC Genome Browser custom track)
Alignm length: 288
Alignm identity: 206
Alignm E-value: 0
Alignm gaps (pig, cow): 133, 279

Conread position: 261-546
Cow position: chrX:30899463-30899752 (view UCSC Genome Browser custom track)
Alignm length: 290
Alignm identity: 204
Alignm E-value: 9.94922e-44
Alignm gaps (pig, cow): 133, 0

Conread position: 261-546
Cow position: chrX:36240319-36240031 (view UCSC Genome Browser custom track)
Alignm length: 289
Alignm identity: 208
Alignm E-value: 0
Alignm gaps (pig, cow): 133, 0

Conread position: 261-546
Cow position: chrX:36479856-36479568 (view UCSC Genome Browser custom track)
Alignm length: 289
Alignm identity: 202
Alignm E-value: 2.99878e-43
Alignm gaps (pig, cow): 133, 0

Conread position: 261-546
Cow position: chrX:39549254-39548966 (view UCSC Genome Browser custom track)
Alignm length: 289
Alignm identity: 200
Alignm E-value: 1.99993e-41
Alignm gaps (pig, cow): 133, 0

Conread position: 261-546
Cow position: chrX:48165447-48165159 (view UCSC Genome Browser custom track)
Alignm length: 289
Alignm identity: 204
Alignm E-value: 9.80909e-45
Alignm gaps (pig, cow): 115, 0

Conread position: 261-546
Cow position: chrX:48328463-48328751 (view UCSC Genome Browser custom track)
Alignm length: 289
Alignm identity: 204
Alignm E-value: 4.2039e-45
Alignm gaps (pig, cow): 133, 0

Conread position: 261-554
Cow position: chrX:45263145-45263441 (view UCSC Genome Browser custom track)
Alignm length: 298
Alignm identity: 205
Alignm E-value: 7e-40
Alignm gaps (pig, cow): 133, 80

Conread position: 261-569
Cow position: chrX:37497523-37497832 (view UCSC Genome Browser custom track)
Alignm length: 312
Alignm identity: 217
Alignm E-value: 4.2039e-45
Alignm gaps (pig, cow): 133, 294

Conread position: 261-570
Cow position: chrX:23235754-23235444 (view UCSC Genome Browser custom track)
Alignm length: 313
Alignm identity: 222
Alignm E-value: 0
Alignm gaps (pig, cow): 133, 294

Conread position: 261-571
Cow position: chrX:34095485-34095174 (view UCSC Genome Browser custom track)
Alignm length: 314
Alignm identity: 222
Alignm E-value: 0
Alignm gaps (pig, cow): 133, 294

Conread position: 261-575
Cow position: chrX:34401917-34401607 (view UCSC Genome Browser custom track)
Alignm length: 319
Alignm identity: 241
Alignm E-value: 0
Alignm gaps (pig, cow): 80, 9

Conread position: 261-581
Cow position: chrX:14409463-14409784 (view UCSC Genome Browser custom track)
Alignm length: 324
Alignm identity: 223
Alignm E-value: 4.2039e-45
Alignm gaps (pig, cow): 133, 294

Conread position: 261-585
Cow position: chrX:24447725-24447400 (view UCSC Genome Browser custom track)
Alignm length: 328
Alignm identity: 229
Alignm E-value: 0
Alignm gaps (pig, cow): 115, 294

Conread position: 261-587
Cow position: chrX:15505215-15504888 (view UCSC Genome Browser custom track)
Alignm length: 330
Alignm identity: 233
Alignm E-value: 0
Alignm gaps (pig, cow): 133, 294

Conread position: 261-587
Cow position: chrX:44558003-44557676 (view UCSC Genome Browser custom track)
Alignm length: 331
Alignm identity: 229
Alignm E-value: 4.2039e-45
Alignm gaps (pig, cow): 133, 180

Conread position: 261-590
Cow position: chrX:10496157-10495827 (view UCSC Genome Browser custom track)
Alignm length: 333
Alignm identity: 238
Alignm E-value: 0
Alignm gaps (pig, cow): 132, 294

Conread position: 261-592
Cow position: chrX:15438729-15439057 (view UCSC Genome Browser custom track)
Alignm length: 334
Alignm identity: 235
Alignm E-value: 0
Alignm gaps (pig, cow): 172, 132

Conread position: 261-598
Cow position: chrX:2160689-2160351 (view UCSC Genome Browser custom track)
Alignm length: 341
Alignm identity: 244
Alignm E-value: 0
Alignm gaps (pig, cow): 133, 294

Conread position: 261-598
Cow position: chrX:5599054-5599392 (view UCSC Genome Browser custom track)
Alignm length: 341
Alignm identity: 240
Alignm E-value: 0
Alignm gaps (pig, cow): 115, 294

Conread position: 261-598
Cow position: chrX:19495036-19495374 (view UCSC Genome Browser custom track)
Alignm length: 341
Alignm identity: 244
Alignm E-value: 0
Alignm gaps (pig, cow): 133, 294

Conread position: 261-598
Cow position: chrX:30171786-30172124 (view UCSC Genome Browser custom track)
Alignm length: 341
Alignm identity: 240
Alignm E-value: 0
Alignm gaps (pig, cow): 133, 294

Conread position: 261-598
Cow position: chrX:32010955-32010617 (view UCSC Genome Browser custom track)
Alignm length: 341
Alignm identity: 245
Alignm E-value: 0
Alignm gaps (pig, cow): 133, 294

Conread position: 261-598
Cow position: chrX:38442886-38442548 (view UCSC Genome Browser custom track)
Alignm length: 341
Alignm identity: 243
Alignm E-value: 0
Alignm gaps (pig, cow): 133, 294

Conread position: 261-599
Cow position: chrX:2362423-2362083 (view UCSC Genome Browser custom track)
Alignm length: 343
Alignm identity: 239
Alignm E-value: 0
Alignm gaps (pig, cow): 133, 294

Conread position: 261-602
Cow position: chrX:15094290-15093946 (view UCSC Genome Browser custom track)
Alignm length: 345
Alignm identity: 138
Alignm E-value: 4e-24
Alignm gaps (pig, cow): 115, 0

Conread position: 261-607
Cow position: chrX:2417560-2417907 (view UCSC Genome Browser custom track)
Alignm length: 350
Alignm identity: 247
Alignm E-value: 0
Alignm gaps (pig, cow): 133, 294

Conread position: 261-607
Cow position: chrX:10444490-10444838 (view UCSC Genome Browser custom track)
Alignm length: 351
Alignm identity: 245
Alignm E-value: 0
Alignm gaps (pig, cow): 133, 295

Conread position: 261-607
Cow position: chrX:15346045-15346392 (view UCSC Genome Browser custom track)
Alignm length: 350
Alignm identity: 250
Alignm E-value: 0
Alignm gaps (pig, cow): 133, 294

Conread position: 261-607
Cow position: chrX:16286133-16285788 (view UCSC Genome Browser custom track)
Alignm length: 350
Alignm identity: 244
Alignm E-value: 0
Alignm gaps (pig, cow): 133, 253

Conread position: 261-607
Cow position: chrX:16359091-16359432 (view UCSC Genome Browser custom track)
Alignm length: 350
Alignm identity: 244
Alignm E-value: 0
Alignm gaps (pig, cow): 130, 155

Conread position: 261-607
Cow position: chrX:28057871-28058218 (view UCSC Genome Browser custom track)
Alignm length: 350
Alignm identity: 252
Alignm E-value: 0
Alignm gaps (pig, cow): 133, 294

Conread position: 261-607
Cow position: chrX:29760623-29760276 (view UCSC Genome Browser custom track)
Alignm length: 350
Alignm identity: 243
Alignm E-value: 0
Alignm gaps (pig, cow): 115, 294

Conread position: 261-607
Cow position: chrX:37816512-37816165 (view UCSC Genome Browser custom track)
Alignm length: 350
Alignm identity: 245
Alignm E-value: 0
Alignm gaps (pig, cow): 133, 294

Conread position: 261-607
Cow position: chrX:42460104-42459749 (view UCSC Genome Browser custom track)
Alignm length: 358
Alignm identity: 255
Alignm E-value: 0
Alignm gaps (pig, cow): 115, 302

Conread position: 261-608
Cow position: chrX:361529-361877 (view UCSC Genome Browser custom track)
Alignm length: 351
Alignm identity: 243
Alignm E-value: 0
Alignm gaps (pig, cow): 133, 294

Conread position: 261-608
Cow position: chrX:1975673-1976021 (view UCSC Genome Browser custom track)
Alignm length: 351
Alignm identity: 247
Alignm E-value: 0
Alignm gaps (pig, cow): 133, 294

Conread position: 261-608
Cow position: chrX:3157542-3157194 (view UCSC Genome Browser custom track)
Alignm length: 351
Alignm identity: 250
Alignm E-value: 0
Alignm gaps (pig, cow): 133, 294

Conread position: 261-608
Cow position: chrX:3388030-3387682 (view UCSC Genome Browser custom track)
Alignm length: 351
Alignm identity: 249
Alignm E-value: 0
Alignm gaps (pig, cow): 133, 294

Conread position: 261-608
Cow position: chrX:4343673-4343325 (view UCSC Genome Browser custom track)
Alignm length: 351
Alignm identity: 245
Alignm E-value: 0
Alignm gaps (pig, cow): 133, 294

Conread position: 261-608
Cow position: chrX:4622030-4622378 (view UCSC Genome Browser custom track)
Alignm length: 351
Alignm identity: 251
Alignm E-value: 0
Alignm gaps (pig, cow): 115, 294

Conread position: 261-608
Cow position: chrX:5123437-5123783 (view UCSC Genome Browser custom track)
Alignm length: 351
Alignm identity: 246
Alignm E-value: 0
Alignm gaps (pig, cow): 133, 265

Conread position: 261-608
Cow position: chrX:5646180-5646528 (view UCSC Genome Browser custom track)
Alignm length: 351
Alignm identity: 249
Alignm E-value: 0
Alignm gaps (pig, cow): 133, 294

Conread position: 261-608
Cow position: chrX:7311917-7311569 (view UCSC Genome Browser custom track)
Alignm length: 351
Alignm identity: 245
Alignm E-value: 0
Alignm gaps (pig, cow): 133, 294

Conread position: 261-608
Cow position: chrX:7755825-7755477 (view UCSC Genome Browser custom track)
Alignm length: 351
Alignm identity: 245
Alignm E-value: 0
Alignm gaps (pig, cow): 133, 294

Conread position: 261-608
Cow position: chrX:9018379-9018727 (view UCSC Genome Browser custom track)
Alignm length: 351
Alignm identity: 251
Alignm E-value: 0
Alignm gaps (pig, cow): 133, 294

Conread position: 261-608
Cow position: chrX:9085409-9085757 (view UCSC Genome Browser custom track)
Alignm length: 351
Alignm identity: 244
Alignm E-value: 0
Alignm gaps (pig, cow): 133, 294

Conread position: 261-608
Cow position: chrX:9154284-9153936 (view UCSC Genome Browser custom track)
Alignm length: 351
Alignm identity: 247
Alignm E-value: 0
Alignm gaps (pig, cow): 133, 294

Conread position: 261-608
Cow position: chrX:10922647-10922995 (view UCSC Genome Browser custom track)
Alignm length: 351
Alignm identity: 248
Alignm E-value: 0
Alignm gaps (pig, cow): 133, 294

Conread position: 261-608
Cow position: chrX:11358141-11358489 (view UCSC Genome Browser custom track)
Alignm length: 351
Alignm identity: 256
Alignm E-value: 0
Alignm gaps (pig, cow): 133, 294

Conread position: 261-608
Cow position: chrX:11664102-11663754 (view UCSC Genome Browser custom track)
Alignm length: 351
Alignm identity: 252
Alignm E-value: 0
Alignm gaps (pig, cow): 133, 294

Conread position: 261-608
Cow position: chrX:11672705-11672357 (view UCSC Genome Browser custom track)
Alignm length: 351
Alignm identity: 247
Alignm E-value: 0
Alignm gaps (pig, cow): 133, 294

Conread position: 261-608
Cow position: chrX:12001223-12001571 (view UCSC Genome Browser custom track)
Alignm length: 351
Alignm identity: 252
Alignm E-value: 0
Alignm gaps (pig, cow): 133, 294

Conread position: 261-608
Cow position: chrX:12347802-12347453 (view UCSC Genome Browser custom track)
Alignm length: 352
Alignm identity: 248
Alignm E-value: 0
Alignm gaps (pig, cow): 133, 294

Conread position: 261-608
Cow position: chrX:13070678-13071025 (view UCSC Genome Browser custom track)
Alignm length: 351
Alignm identity: 249
Alignm E-value: 0
Alignm gaps (pig, cow): 115, 219

Conread position: 261-608
Cow position: chrX:13091238-13091585 (view UCSC Genome Browser custom track)
Alignm length: 351
Alignm identity: 249
Alignm E-value: 0
Alignm gaps (pig, cow): 115, 219

Conread position: 261-608
Cow position: chrX:13396328-13396675 (view UCSC Genome Browser custom track)
Alignm length: 351
Alignm identity: 246
Alignm E-value: 0
Alignm gaps (pig, cow): 133, 294

Conread position: 261-608
Cow position: chrX:13448194-13447846 (view UCSC Genome Browser custom track)
Alignm length: 351
Alignm identity: 250
Alignm E-value: 0
Alignm gaps (pig, cow): 133, 294

Conread position: 261-608
Cow position: chrX:15172609-15172951 (view UCSC Genome Browser custom track)
Alignm length: 349
Alignm identity: 236
Alignm E-value: 2.94273e-44
Alignm gaps (pig, cow): 173, 178

Conread position: 261-608
Cow position: chrX:15259695-15260043 (view UCSC Genome Browser custom track)
Alignm length: 351
Alignm identity: 252
Alignm E-value: 0
Alignm gaps (pig, cow): 131, 294

Conread position: 261-608
Cow position: chrX:15531231-15531576 (view UCSC Genome Browser custom track)
Alignm length: 351
Alignm identity: 250
Alignm E-value: 0
Alignm gaps (pig, cow): 133, 255

Conread position: 261-608
Cow position: chrX:15781505-15781157 (view UCSC Genome Browser custom track)
Alignm length: 351
Alignm identity: 245
Alignm E-value: 0
Alignm gaps (pig, cow): 133, 294

Conread position: 261-608
Cow position: chrX:16047073-16046724 (view UCSC Genome Browser custom track)
Alignm length: 352
Alignm identity: 245
Alignm E-value: 0
Alignm gaps (pig, cow): 132, 295

Conread position: 261-608
Cow position: chrX:17980519-17980171 (view UCSC Genome Browser custom track)
Alignm length: 351
Alignm identity: 248
Alignm E-value: 0
Alignm gaps (pig, cow): 133, 294

Conread position: 261-608
Cow position: chrX:18024963-18024616 (view UCSC Genome Browser custom track)
Alignm length: 351
Alignm identity: 243
Alignm E-value: 0
Alignm gaps (pig, cow): 133, 255

Conread position: 261-608
Cow position: chrX:18223336-18222989 (view UCSC Genome Browser custom track)
Alignm length: 351
Alignm identity: 248
Alignm E-value: 0
Alignm gaps (pig, cow): 133, 179

Conread position: 261-608
Cow position: chrX:18462051-18462399 (view UCSC Genome Browser custom track)
Alignm length: 351
Alignm identity: 251
Alignm E-value: 0
Alignm gaps (pig, cow): 133, 294

Conread position: 261-608
Cow position: chrX:19473236-19473584 (view UCSC Genome Browser custom track)
Alignm length: 352
Alignm identity: 248
Alignm E-value: 0
Alignm gaps (pig, cow): 115, 295

Conread position: 261-608
Cow position: chrX:20099246-20098898 (view UCSC Genome Browser custom track)
Alignm length: 351
Alignm identity: 248
Alignm E-value: 0
Alignm gaps (pig, cow): 133, 294

Conread position: 261-608
Cow position: chrX:22557425-22557077 (view UCSC Genome Browser custom track)
Alignm length: 351
Alignm identity: 248
Alignm E-value: 0
Alignm gaps (pig, cow): 133, 294

Conread position: 261-608
Cow position: chrX:23109683-23109338 (view UCSC Genome Browser custom track)
Alignm length: 350
Alignm identity: 250
Alignm E-value: 0
Alignm gaps (pig, cow): 133, 185

Conread position: 261-608
Cow position: chrX:24509791-24509443 (view UCSC Genome Browser custom track)
Alignm length: 351
Alignm identity: 247
Alignm E-value: 0
Alignm gaps (pig, cow): 133, 294

Conread position: 261-608
Cow position: chrX:25276575-25276923 (view UCSC Genome Browser custom track)
Alignm length: 351
Alignm identity: 250
Alignm E-value: 0
Alignm gaps (pig, cow): 133, 294

Conread position: 261-608
Cow position: chrX:25288755-25289103 (view UCSC Genome Browser custom track)
Alignm length: 351
Alignm identity: 249
Alignm E-value: 0
Alignm gaps (pig, cow): 133, 294

Conread position: 261-608
Cow position: chrX:27404022-27404369 (view UCSC Genome Browser custom track)
Alignm length: 351
Alignm identity: 252
Alignm E-value: 0
Alignm gaps (pig, cow): 115, 206

Conread position: 261-608
Cow position: chrX:27422358-27422705 (view UCSC Genome Browser custom track)
Alignm length: 350
Alignm identity: 248
Alignm E-value: 0
Alignm gaps (pig, cow): 133, 293

Conread position: 261-608
Cow position: chrX:27594258-27594604 (view UCSC Genome Browser custom track)
Alignm length: 351
Alignm identity: 244
Alignm E-value: 0
Alignm gaps (pig, cow): 133, 163

Conread position: 261-608
Cow position: chrX:30197221-30196873 (view UCSC Genome Browser custom track)
Alignm length: 351
Alignm identity: 245
Alignm E-value: 0
Alignm gaps (pig, cow): 133, 294

Conread position: 261-608
Cow position: chrX:30816345-30816693 (view UCSC Genome Browser custom track)
Alignm length: 351
Alignm identity: 240
Alignm E-value: 0
Alignm gaps (pig, cow): 133, 294

Conread position: 261-608
Cow position: chrX:31605608-31605260 (view UCSC Genome Browser custom track)
Alignm length: 351
Alignm identity: 250
Alignm E-value: 0
Alignm gaps (pig, cow): 133, 294

Conread position: 261-608
Cow position: chrX:32038919-32039266 (view UCSC Genome Browser custom track)
Alignm length: 351
Alignm identity: 249
Alignm E-value: 0
Alignm gaps (pig, cow): 133, 294

Conread position: 261-608
Cow position: chrX:32331551-32331207 (view UCSC Genome Browser custom track)
Alignm length: 349
Alignm identity: 244
Alignm E-value: 0
Alignm gaps (pig, cow): 186, 132

Conread position: 261-608
Cow position: chrX:33764268-33763920 (view UCSC Genome Browser custom track)
Alignm length: 351
Alignm identity: 253
Alignm E-value: 0
Alignm gaps (pig, cow): 133, 294

Conread position: 261-608
Cow position: chrX:34285139-34285488 (view UCSC Genome Browser custom track)
Alignm length: 352
Alignm identity: 248
Alignm E-value: 0
Alignm gaps (pig, cow): 133, 295

Conread position: 261-608
Cow position: chrX:37060867-37061215 (view UCSC Genome Browser custom track)
Alignm length: 351
Alignm identity: 247
Alignm E-value: 0
Alignm gaps (pig, cow): 133, 294

Conread position: 261-608
Cow position: chrX:38230343-38230691 (view UCSC Genome Browser custom track)
Alignm length: 351
Alignm identity: 248
Alignm E-value: 0
Alignm gaps (pig, cow): 133, 294

Conread position: 261-608
Cow position: chrX:39714473-39714127 (view UCSC Genome Browser custom track)
Alignm length: 351
Alignm identity: 250
Alignm E-value: 0
Alignm gaps (pig, cow): 115, 294

Conread position: 261-608
Cow position: chrX:41488241-41488589 (view UCSC Genome Browser custom track)
Alignm length: 351
Alignm identity: 251
Alignm E-value: 0
Alignm gaps (pig, cow): 133, 294

Conread position: 261-608
Cow position: chrX:45904102-45903754 (view UCSC Genome Browser custom track)
Alignm length: 351
Alignm identity: 249
Alignm E-value: 0
Alignm gaps (pig, cow): 133, 294

Conread position: 261-608
Cow position: chrX:46578931-46579279 (view UCSC Genome Browser custom track)
Alignm length: 351
Alignm identity: 250
Alignm E-value: 0
Alignm gaps (pig, cow): 133, 294

Conread position: 261-608
Cow position: chrX:47608338-47607989 (view UCSC Genome Browser custom track)
Alignm length: 352
Alignm identity: 247
Alignm E-value: 0
Alignm gaps (pig, cow): 133, 294

Conread position: 262-601
Cow position: chrX:42994535-42994197 (view UCSC Genome Browser custom track)
Alignm length: 343
Alignm identity: 271
Alignm E-value: 0
Alignm gaps (pig, cow): 128, 84

Conread position: 263-553
Cow position: chrX:48204990-48205286 (view UCSC Genome Browser custom track)
Alignm length: 297
Alignm identity: 207
Alignm E-value: 7.00005e-41
Alignm gaps (pig, cow): 71, 0

Conread position: 263-608
Cow position: chrX:45787050-45786706 (view UCSC Genome Browser custom track)
Alignm length: 348
Alignm identity: 254
Alignm E-value: 0
Alignm gaps (pig, cow): 113, 123

Conread position: 264-466
Cow position: chrX:38102524-38102728 (view UCSC Genome Browser custom track)
Alignm length: 205
Alignm identity: 143
Alignm E-value: 2e-27
Alignm gaps (pig, cow): 112, 0

Conread position: 264-607
Cow position: chrX:5406977-5406635 (view UCSC Genome Browser custom track)
Alignm length: 347
Alignm identity: 243
Alignm E-value: 0
Alignm gaps (pig, cow): 9, 112

Conread position: 264-608
Cow position: chrX:2559042-2559384 (view UCSC Genome Browser custom track)
Alignm length: 347
Alignm identity: 251
Alignm E-value: 0
Alignm gaps (pig, cow): 112, 166

Conread position: 265-424
Cow position: chrX:21663228-21663068 (view UCSC Genome Browser custom track)
Alignm length: 162
Alignm identity: 119
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 129, 112

Conread position: 265-494
Cow position: chrX:7351215-7350990 (view UCSC Genome Browser custom track)
Alignm length: 233
Alignm identity: 182
Alignm E-value: 1.4013e-45
Alignm gaps (pig, cow): 129, 93

Conread position: 266-415
Cow position: chrX:11856343-11856197 (view UCSC Genome Browser custom track)
Alignm length: 152
Alignm identity: 116
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 124, 41

Conread position: 266-608
Cow position: chrX:26531877-26531535 (view UCSC Genome Browser custom track)
Alignm length: 346
Alignm identity: 248
Alignm E-value: 0
Alignm gaps (pig, cow): 110, 278

Conread position: 266-608
Cow position: chrX:45043477-45043134 (view UCSC Genome Browser custom track)
Alignm length: 346
Alignm identity: 241
Alignm E-value: 0
Alignm gaps (pig, cow): 131, 285

Conread position: 267-420
Cow position: chrX:40116335-40116188 (view UCSC Genome Browser custom track)
Alignm length: 154
Alignm identity: 115
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 52, 0

Conread position: 267-423
Cow position: chrX:42011197-42011040 (view UCSC Genome Browser custom track)
Alignm length: 158
Alignm identity: 114
Alignm E-value: 3e-23
Alignm gaps (pig, cow): 123, 0

Conread position: 267-436
Cow position: chrX:48536748-48536919 (view UCSC Genome Browser custom track)
Alignm length: 173
Alignm identity: 128
Alignm E-value: 5e-27
Alignm gaps (pig, cow): 127, 109

Conread position: 267-439
Cow position: chrX:7497157-7496989 (view UCSC Genome Browser custom track)
Alignm length: 173
Alignm identity: 126
Alignm E-value: 5e-26
Alignm gaps (pig, cow): 38, 0

Conread position: 267-472
Cow position: chrX:39346868-39347076 (view UCSC Genome Browser custom track)
Alignm length: 209
Alignm identity: 151
Alignm E-value: 3e-32
Alignm gaps (pig, cow): 88, 0

Conread position: 267-529
Cow position: chrX:17271371-17271635 (view UCSC Genome Browser custom track)
Alignm length: 266
Alignm identity: 189
Alignm E-value: 2e-40
Alignm gaps (pig, cow): 108, 247

Conread position: 267-532
Cow position: chrX:20945479-20945218 (view UCSC Genome Browser custom track)
Alignm length: 269
Alignm identity: 198
Alignm E-value: 2.99878e-43
Alignm gaps (pig, cow): 109, 71

Conread position: 267-544
Cow position: chrX:630392-630655 (view UCSC Genome Browser custom track)
Alignm length: 280
Alignm identity: 202
Alignm E-value: 1e-34
Alignm gaps (pig, cow): 58, 104

Conread position: 267-546
Cow position: chrX:46606595-46606862 (view UCSC Genome Browser custom track)
Alignm length: 281
Alignm identity: 196
Alignm E-value: 1e-33
Alignm gaps (pig, cow): 180, 122

Conread position: 267-573
Cow position: chrX:25419244-25419553 (view UCSC Genome Browser custom track)
Alignm length: 311
Alignm identity: 224
Alignm E-value: 0
Alignm gaps (pig, cow): 123, 160

Conread position: 267-574
Cow position: chrX:40142283-40142590 (view UCSC Genome Browser custom track)
Alignm length: 313
Alignm identity: 210
Alignm E-value: 1e-33
Alignm gaps (pig, cow): 186, 92

Conread position: 267-587
Cow position: chrX:39701144-39700811 (view UCSC Genome Browser custom track)
Alignm length: 335
Alignm identity: 232
Alignm E-value: 8.00001e-42
Alignm gaps (pig, cow): 107, 320

Conread position: 267-592
Cow position: chrX:18989882-18990194 (view UCSC Genome Browser custom track)
Alignm length: 329
Alignm identity: 227
Alignm E-value: 1e-35
Alignm gaps (pig, cow): 124, 247

Conread position: 267-598
Cow position: chrX:23140228-23139899 (view UCSC Genome Browser custom track)
Alignm length: 334
Alignm identity: 241
Alignm E-value: 0
Alignm gaps (pig, cow): 127, 179

Conread position: 267-608
Cow position: chrX:17743978-17743646 (view UCSC Genome Browser custom track)
Alignm length: 345
Alignm identity: 236
Alignm E-value: 7.00005e-41
Alignm gaps (pig, cow): 126, 150

Conread position: 267-608
Cow position: chrX:25338097-25337769 (view UCSC Genome Browser custom track)
Alignm length: 347
Alignm identity: 251
Alignm E-value: 0
Alignm gaps (pig, cow): 117, 249

Conread position: 270-374
Cow position: chrX:31311940-31311836 (view UCSC Genome Browser custom track)
Alignm length: 105
Alignm identity: 84
Alignm E-value: 8e-21
Alignm gaps (pig, cow): 0, 0

Conread position: 270-416
Cow position: chrX:9201461-9201314 (view UCSC Genome Browser custom track)
Alignm length: 148
Alignm identity: 113
Alignm E-value: 5e-27
Alignm gaps (pig, cow): 129, 0

Conread position: 270-422
Cow position: chrX:8492843-8492997 (view UCSC Genome Browser custom track)
Alignm length: 155
Alignm identity: 112
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 121, 0

Conread position: 270-424
Cow position: chrX:9416782-9416934 (view UCSC Genome Browser custom track)
Alignm length: 157
Alignm identity: 120
Alignm E-value: 5e-26
Alignm gaps (pig, cow): 124, 52

Conread position: 270-462
Cow position: chrX:9997424-9997611 (view UCSC Genome Browser custom track)
Alignm length: 195
Alignm identity: 142
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 120, 54

Conread position: 270-475
Cow position: chrX:6607334-6607116 (view UCSC Genome Browser custom track)
Alignm length: 219
Alignm identity: 155
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 144, 0

Conread position: 270-497
Cow position: chrX:25713708-25713494 (view UCSC Genome Browser custom track)
Alignm length: 228
Alignm identity: 162
Alignm E-value: 2e-27
Alignm gaps (pig, cow): 95, 0

Conread position: 270-502
Cow position: chrX:34990946-34990721 (view UCSC Genome Browser custom track)
Alignm length: 235
Alignm identity: 173
Alignm E-value: 4e-36
Alignm gaps (pig, cow): 118, 30

Conread position: 270-513
Cow position: chrX:38006853-38007099 (view UCSC Genome Browser custom track)
Alignm length: 247
Alignm identity: 193
Alignm E-value: 0
Alignm gaps (pig, cow): 124, 0

Conread position: 270-526
Cow position: chrX:41403887-41403617 (view UCSC Genome Browser custom track)
Alignm length: 271
Alignm identity: 196
Alignm E-value: 2e-39
Alignm gaps (pig, cow): 121, 0

Conread position: 270-526
Cow position: chrX:41410435-41410165 (view UCSC Genome Browser custom track)
Alignm length: 271
Alignm identity: 196
Alignm E-value: 2e-39
Alignm gaps (pig, cow): 121, 0

Conread position: 270-527
Cow position: chrX:44731509-44731255 (view UCSC Genome Browser custom track)
Alignm length: 261
Alignm identity: 185
Alignm E-value: 1e-36
Alignm gaps (pig, cow): 126, 146

Conread position: 270-530
Cow position: chrX:9227067-9227332 (view UCSC Genome Browser custom track)
Alignm length: 267
Alignm identity: 196
Alignm E-value: 2.94273e-44
Alignm gaps (pig, cow): 69, 121

Conread position: 270-551
Cow position: chrX:11806102-11806384 (view UCSC Genome Browser custom track)
Alignm length: 285
Alignm identity: 202
Alignm E-value: 2.99878e-43
Alignm gaps (pig, cow): 122, 202

Conread position: 270-586
Cow position: chrX:30543376-30543689 (view UCSC Genome Browser custom track)
Alignm length: 322
Alignm identity: 233
Alignm E-value: 0
Alignm gaps (pig, cow): 177, 92

Conread position: 270-598
Cow position: chrX:38140121-38140452 (view UCSC Genome Browser custom track)
Alignm length: 337
Alignm identity: 226
Alignm E-value: 1e-34
Alignm gaps (pig, cow): 113, 143

Conread position: 270-600
Cow position: chrX:16846977-16847301 (view UCSC Genome Browser custom track)
Alignm length: 338
Alignm identity: 218
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 154, 105

Conread position: 270-606
Cow position: chrX:14884047-14884384 (view UCSC Genome Browser custom track)
Alignm length: 342
Alignm identity: 263
Alignm E-value: 0
Alignm gaps (pig, cow): 123, 226

Conread position: 270-606
Cow position: chrX:37232324-37231989 (view UCSC Genome Browser custom track)
Alignm length: 341
Alignm identity: 257
Alignm E-value: 0
Alignm gaps (pig, cow): 122, 168

Conread position: 270-606
Cow position: chrX:40269399-40269054 (view UCSC Genome Browser custom track)
Alignm length: 348
Alignm identity: 267
Alignm E-value: 0
Alignm gaps (pig, cow): 86, 286

Conread position: 270-607
Cow position: chrX:17964608-17964940 (view UCSC Genome Browser custom track)
Alignm length: 341
Alignm identity: 234
Alignm E-value: 2.99878e-43
Alignm gaps (pig, cow): 120, 145

Conread position: 270-608
Cow position: chrX:7806293-7805952 (view UCSC Genome Browser custom track)
Alignm length: 343
Alignm identity: 247
Alignm E-value: 0
Alignm gaps (pig, cow): 105, 93

Conread position: 270-608
Cow position: chrX:9252264-9252595 (view UCSC Genome Browser custom track)
Alignm length: 342
Alignm identity: 259
Alignm E-value: 0
Alignm gaps (pig, cow): 116, 68

Conread position: 270-608
Cow position: chrX:12458613-12458274 (view UCSC Genome Browser custom track)
Alignm length: 342
Alignm identity: 239
Alignm E-value: 0
Alignm gaps (pig, cow): 124, 285

Conread position: 270-608
Cow position: chrX:19210481-19210820 (view UCSC Genome Browser custom track)
Alignm length: 345
Alignm identity: 237
Alignm E-value: 2.99878e-43
Alignm gaps (pig, cow): 115, 157

Conread position: 270-608
Cow position: chrX:33803098-33803445 (view UCSC Genome Browser custom track)
Alignm length: 349
Alignm identity: 244
Alignm E-value: 0
Alignm gaps (pig, cow): 105, 206

Conread position: 270-608
Cow position: chrX:42086776-42086439 (view UCSC Genome Browser custom track)
Alignm length: 341
Alignm identity: 262
Alignm E-value: 0
Alignm gaps (pig, cow): 126, 276

Conread position: 270-608
Cow position: chrX:45502063-45501724 (view UCSC Genome Browser custom track)
Alignm length: 342
Alignm identity: 245
Alignm E-value: 0
Alignm gaps (pig, cow): 124, 291

Conread position: 272-446
Cow position: chrX:2933632-2933459 (view UCSC Genome Browser custom track)
Alignm length: 175
Alignm identity: 121
Alignm E-value: 9e-22
Alignm gaps (pig, cow): 118, 0

Conread position: 272-499
Cow position: chrX:36365132-36364902 (view UCSC Genome Browser custom track)
Alignm length: 233
Alignm identity: 161
Alignm E-value: 2e-27
Alignm gaps (pig, cow): 104, 144

Conread position: 272-512
Cow position: chrX:29084033-29083795 (view UCSC Genome Browser custom track)
Alignm length: 242
Alignm identity: 173
Alignm E-value: 1e-36
Alignm gaps (pig, cow): 174, 158

Conread position: 272-526
Cow position: chrX:11725350-11725611 (view UCSC Genome Browser custom track)
Alignm length: 262
Alignm identity: 184
Alignm E-value: 1e-35
Alignm gaps (pig, cow): 104, 0

Conread position: 272-529
Cow position: chrX:21255949-21255690 (view UCSC Genome Browser custom track)
Alignm length: 261
Alignm identity: 194
Alignm E-value: 0
Alignm gaps (pig, cow): 104, 111

Conread position: 272-546
Cow position: chrX:30863286-30863563 (view UCSC Genome Browser custom track)
Alignm length: 278
Alignm identity: 200
Alignm E-value: 0
Alignm gaps (pig, cow): 122, 0

Conread position: 272-574
Cow position: chrX:6655354-6655656 (view UCSC Genome Browser custom track)
Alignm length: 306
Alignm identity: 217
Alignm E-value: 0
Alignm gaps (pig, cow): 97, 244

Conread position: 272-596
Cow position: chrX:14135094-14134769 (view UCSC Genome Browser custom track)
Alignm length: 329
Alignm identity: 229
Alignm E-value: 0
Alignm gaps (pig, cow): 122, 169

Conread position: 272-598
Cow position: chrX:17055482-17055155 (view UCSC Genome Browser custom track)
Alignm length: 330
Alignm identity: 227
Alignm E-value: 1.4013e-45
Alignm gaps (pig, cow): 122, 286

Conread position: 272-598
Cow position: chrX:34761979-34761652 (view UCSC Genome Browser custom track)
Alignm length: 330
Alignm identity: 233
Alignm E-value: 0
Alignm gaps (pig, cow): 122, 283

Conread position: 272-599
Cow position: chrX:45467306-45467635 (view UCSC Genome Browser custom track)
Alignm length: 333
Alignm identity: 236
Alignm E-value: 0
Alignm gaps (pig, cow): 90, 121

Conread position: 272-600
Cow position: chrX:3654517-3654193 (view UCSC Genome Browser custom track)
Alignm length: 331
Alignm identity: 235
Alignm E-value: 0
Alignm gaps (pig, cow): 118, 171

Conread position: 272-607
Cow position: chrX:13647876-13648207 (view UCSC Genome Browser custom track)
Alignm length: 339
Alignm identity: 249
Alignm E-value: 0
Alignm gaps (pig, cow): 118, 30

Conread position: 272-607
Cow position: chrX:24735851-24735520 (view UCSC Genome Browser custom track)
Alignm length: 339
Alignm identity: 243
Alignm E-value: 0
Alignm gaps (pig, cow): 104, 218

Conread position: 272-607
Cow position: chrX:30822497-30822161 (view UCSC Genome Browser custom track)
Alignm length: 339
Alignm identity: 240
Alignm E-value: 0
Alignm gaps (pig, cow): 122, 283

Conread position: 272-607
Cow position: chrX:35533764-35533428 (view UCSC Genome Browser custom track)
Alignm length: 339
Alignm identity: 241
Alignm E-value: 0
Alignm gaps (pig, cow): 122, 283

Conread position: 272-607
Cow position: chrX:44168396-44168733 (view UCSC Genome Browser custom track)
Alignm length: 340
Alignm identity: 243
Alignm E-value: 0
Alignm gaps (pig, cow): 122, 284

Conread position: 272-608
Cow position: chrX:671096-671433 (view UCSC Genome Browser custom track)
Alignm length: 340
Alignm identity: 241
Alignm E-value: 0
Alignm gaps (pig, cow): 122, 283

Conread position: 272-608
Cow position: chrX:6566987-6566650 (view UCSC Genome Browser custom track)
Alignm length: 340
Alignm identity: 243
Alignm E-value: 0
Alignm gaps (pig, cow): 122, 283

Conread position: 272-608
Cow position: chrX:17995372-17995035 (view UCSC Genome Browser custom track)
Alignm length: 340
Alignm identity: 244
Alignm E-value: 0
Alignm gaps (pig, cow): 122, 283

Conread position: 272-608
Cow position: chrX:19109128-19109465 (view UCSC Genome Browser custom track)
Alignm length: 340
Alignm identity: 246
Alignm E-value: 0
Alignm gaps (pig, cow): 122, 283

Conread position: 272-608
Cow position: chrX:20021476-20021153 (view UCSC Genome Browser custom track)
Alignm length: 340
Alignm identity: 227
Alignm E-value: 1e-33
Alignm gaps (pig, cow): 122, 200

Conread position: 272-608
Cow position: chrX:30199079-30199416 (view UCSC Genome Browser custom track)
Alignm length: 340
Alignm identity: 240
Alignm E-value: 0
Alignm gaps (pig, cow): 122, 283

Conread position: 272-608
Cow position: chrX:34413689-34413352 (view UCSC Genome Browser custom track)
Alignm length: 340
Alignm identity: 243
Alignm E-value: 0
Alignm gaps (pig, cow): 122, 283

Conread position: 272-608
Cow position: chrX:37403109-37403447 (view UCSC Genome Browser custom track)
Alignm length: 341
Alignm identity: 242
Alignm E-value: 0
Alignm gaps (pig, cow): 104, 284

Conread position: 273-546
Cow position: chrX:22578252-22578524 (view UCSC Genome Browser custom track)
Alignm length: 277
Alignm identity: 189
Alignm E-value: 1e-32
Alignm gaps (pig, cow): 113, 162

Conread position: 273-587
Cow position: chrX:44930547-44930237 (view UCSC Genome Browser custom track)
Alignm length: 319
Alignm identity: 224
Alignm E-value: 9.94922e-44
Alignm gaps (pig, cow): 103, 247

Conread position: 275-508
Cow position: chrX:29356497-29356261 (view UCSC Genome Browser custom track)
Alignm length: 237
Alignm identity: 167
Alignm E-value: 1e-34
Alignm gaps (pig, cow): 119, 0

Conread position: 275-608
Cow position: chrX:47318316-47317982 (view UCSC Genome Browser custom track)
Alignm length: 337
Alignm identity: 238
Alignm E-value: 0
Alignm gaps (pig, cow): 119, 280

Show alignments to all cow chromosomes.