Cow genome map

Conread name: Pig4-TMW8006O17

Conread position: 1-119
Cow position: chr15:609742-609622 (view UCSC Genome Browser custom track)
Alignm length: 121
Alignm identity: 95
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 24, 0

Conread position: 1-252
Cow position: chr15:6487950-6488205 (view UCSC Genome Browser custom track)
Alignm length: 258
Alignm identity: 199
Alignm E-value: 0
Alignm gaps (pig, cow): 24, 209

Conread position: 1-301
Cow position: chr15:4768672-4768978 (view UCSC Genome Browser custom track)
Alignm length: 308
Alignm identity: 232
Alignm E-value: 0
Alignm gaps (pig, cow): 25, 234

Conread position: 1-301
Cow position: chr15:53212235-53211938 (view UCSC Genome Browser custom track)
Alignm length: 307
Alignm identity: 224
Alignm E-value: 0
Alignm gaps (pig, cow): 23, 105

Conread position: 1-474
Cow position: chr15:34517630-34518089 (view UCSC Genome Browser custom track)
Alignm length: 481
Alignm identity: 352
Alignm E-value: 0
Alignm gaps (pig, cow): 30, 189

Conread position: 1-480
Cow position: chr15:2795686-2796157 (view UCSC Genome Browser custom track)
Alignm length: 488
Alignm identity: 366
Alignm E-value: 0
Alignm gaps (pig, cow): 24, 312

Conread position: 1-498
Cow position: chr15:32858357-32858846 (view UCSC Genome Browser custom track)
Alignm length: 506
Alignm identity: 385
Alignm E-value: 0
Alignm gaps (pig, cow): 24, 308

Conread position: 1-509
Cow position: chr15:42944116-42943615 (view UCSC Genome Browser custom track)
Alignm length: 518
Alignm identity: 395
Alignm E-value: 0
Alignm gaps (pig, cow): 9, 309

Conread position: 1-524
Cow position: chr15:6762605-6762085 (view UCSC Genome Browser custom track)
Alignm length: 536
Alignm identity: 406
Alignm E-value: 0
Alignm gaps (pig, cow): 24, 307

Conread position: 1-532
Cow position: chr15:7547366-7547886 (view UCSC Genome Browser custom track)
Alignm length: 540
Alignm identity: 404
Alignm E-value: 0
Alignm gaps (pig, cow): 24, 50

Conread position: 1-532
Cow position: chr15:18229557-18230084 (view UCSC Genome Browser custom track)
Alignm length: 544
Alignm identity: 409
Alignm E-value: 0
Alignm gaps (pig, cow): 24, 83

Conread position: 1-553
Cow position: chr15:4653962-4654508 (view UCSC Genome Browser custom track)
Alignm length: 566
Alignm identity: 413
Alignm E-value: 0
Alignm gaps (pig, cow): 24, 48

Conread position: 1-566
Cow position: chr15:2952659-2952101 (view UCSC Genome Browser custom track)
Alignm length: 579
Alignm identity: 417
Alignm E-value: 0
Alignm gaps (pig, cow): 24, 304

Conread position: 1-566
Cow position: chr15:3153073-3152519 (view UCSC Genome Browser custom track)
Alignm length: 579
Alignm identity: 419
Alignm E-value: 0
Alignm gaps (pig, cow): 24, 162

Conread position: 1-580
Cow position: chr15:17123095-17123667 (view UCSC Genome Browser custom track)
Alignm length: 595
Alignm identity: 401
Alignm E-value: 0
Alignm gaps (pig, cow): 14, 150

Conread position: 1-583
Cow position: chr15:17699685-17700257 (view UCSC Genome Browser custom track)
Alignm length: 601
Alignm identity: 401
Alignm E-value: 0
Alignm gaps (pig, cow): 24, 182

Conread position: 1-592
Cow position: chr15:2633218-2632629 (view UCSC Genome Browser custom track)
Alignm length: 606
Alignm identity: 447
Alignm E-value: 0
Alignm gaps (pig, cow): 24, 308

Conread position: 1-593
Cow position: chr15:21830429-21831018 (view UCSC Genome Browser custom track)
Alignm length: 609
Alignm identity: 438
Alignm E-value: 0
Alignm gaps (pig, cow): 14, 285

Conread position: 1-603
Cow position: chr15:13430315-13430910 (view UCSC Genome Browser custom track)
Alignm length: 613
Alignm identity: 462
Alignm E-value: 0
Alignm gaps (pig, cow): 24, 309

Conread position: 1-604
Cow position: chr15:32491397-32490799 (view UCSC Genome Browser custom track)
Alignm length: 616
Alignm identity: 472
Alignm E-value: 0
Alignm gaps (pig, cow): 24, 308

Conread position: 1-607
Cow position: chr15:24090319-24090922 (view UCSC Genome Browser custom track)
Alignm length: 619
Alignm identity: 421
Alignm E-value: 0
Alignm gaps (pig, cow): 24, 308

Conread position: 1-613
Cow position: chr15:4081492-4082101 (view UCSC Genome Browser custom track)
Alignm length: 626
Alignm identity: 473
Alignm E-value: 0
Alignm gaps (pig, cow): 18, 282

Conread position: 1-620
Cow position: chr15:2663879-2664493 (view UCSC Genome Browser custom track)
Alignm length: 632
Alignm identity: 477
Alignm E-value: 0
Alignm gaps (pig, cow): 24, 308

Conread position: 1-623
Cow position: chr15:1775634-1776271 (view UCSC Genome Browser custom track)
Alignm length: 642
Alignm identity: 468
Alignm E-value: 0
Alignm gaps (pig, cow): 19, 78

Conread position: 1-630
Cow position: chr15:23773797-23774413 (view UCSC Genome Browser custom track)
Alignm length: 638
Alignm identity: 460
Alignm E-value: 0
Alignm gaps (pig, cow): 30, 254

Conread position: 1-630
Cow position: chr15:28487637-28487018 (view UCSC Genome Browser custom track)
Alignm length: 644
Alignm identity: 479
Alignm E-value: 0
Alignm gaps (pig, cow): 24, 308

Conread position: 1-635
Cow position: chr15:6330632-6331238 (view UCSC Genome Browser custom track)
Alignm length: 642
Alignm identity: 475
Alignm E-value: 0
Alignm gaps (pig, cow): 24, 78

Conread position: 1-637
Cow position: chr15:313309-312675 (view UCSC Genome Browser custom track)
Alignm length: 653
Alignm identity: 484
Alignm E-value: 0
Alignm gaps (pig, cow): 24, 308

Conread position: 1-637
Cow position: chr15:4788307-4787677 (view UCSC Genome Browser custom track)
Alignm length: 648
Alignm identity: 484
Alignm E-value: 0
Alignm gaps (pig, cow): 22, 241

Conread position: 1-637
Cow position: chr15:5641097-5640467 (view UCSC Genome Browser custom track)
Alignm length: 649
Alignm identity: 493
Alignm E-value: 0
Alignm gaps (pig, cow): 24, 119

Conread position: 1-637
Cow position: chr15:6616289-6616922 (view UCSC Genome Browser custom track)
Alignm length: 651
Alignm identity: 490
Alignm E-value: 0
Alignm gaps (pig, cow): 24, 308

Conread position: 1-637
Cow position: chr15:6648915-6648292 (view UCSC Genome Browser custom track)
Alignm length: 649
Alignm identity: 496
Alignm E-value: 0
Alignm gaps (pig, cow): 24, 101

Conread position: 1-637
Cow position: chr15:8753368-8753984 (view UCSC Genome Browser custom track)
Alignm length: 652
Alignm identity: 473
Alignm E-value: 0
Alignm gaps (pig, cow): 24, 145

Conread position: 1-637
Cow position: chr15:13388882-13388225 (view UCSC Genome Browser custom track)
Alignm length: 662
Alignm identity: 479
Alignm E-value: 0
Alignm gaps (pig, cow): 30, 368

Conread position: 1-637
Cow position: chr15:18019886-18019263 (view UCSC Genome Browser custom track)
Alignm length: 644
Alignm identity: 450
Alignm E-value: 0
Alignm gaps (pig, cow): 33, 61

Conread position: 1-637
Cow position: chr15:18265270-18264637 (view UCSC Genome Browser custom track)
Alignm length: 652
Alignm identity: 493
Alignm E-value: 0
Alignm gaps (pig, cow): 24, 308

Conread position: 1-637
Cow position: chr15:19735308-19734675 (view UCSC Genome Browser custom track)
Alignm length: 649
Alignm identity: 502
Alignm E-value: 0
Alignm gaps (pig, cow): 24, 309

Conread position: 1-637
Cow position: chr15:22154130-22154772 (view UCSC Genome Browser custom track)
Alignm length: 651
Alignm identity: 423
Alignm E-value: 0
Alignm gaps (pig, cow): 14, 158

Conread position: 1-637
Cow position: chr15:26591855-26591223 (view UCSC Genome Browser custom track)
Alignm length: 648
Alignm identity: 488
Alignm E-value: 0
Alignm gaps (pig, cow): 24, 308

Conread position: 1-637
Cow position: chr15:31270380-31269750 (view UCSC Genome Browser custom track)
Alignm length: 649
Alignm identity: 489
Alignm E-value: 0
Alignm gaps (pig, cow): 24, 308

Conread position: 1-637
Cow position: chr15:32718118-32717493 (view UCSC Genome Browser custom track)
Alignm length: 647
Alignm identity: 469
Alignm E-value: 0
Alignm gaps (pig, cow): 22, 183

Conread position: 1-638
Cow position: chr15:9522711-9522074 (view UCSC Genome Browser custom track)
Alignm length: 653
Alignm identity: 492
Alignm E-value: 0
Alignm gaps (pig, cow): 24, 310

Conread position: 1-649
Cow position: chr15:36670660-36671297 (view UCSC Genome Browser custom track)
Alignm length: 668
Alignm identity: 486
Alignm E-value: 0
Alignm gaps (pig, cow): 24, 315

Conread position: 1-649
Cow position: chr15:41359496-41360138 (view UCSC Genome Browser custom track)
Alignm length: 668
Alignm identity: 476
Alignm E-value: 0
Alignm gaps (pig, cow): 30, 201

Conread position: 1-649
Cow position: chr15:42532541-42533186 (view UCSC Genome Browser custom track)
Alignm length: 661
Alignm identity: 498
Alignm E-value: 0
Alignm gaps (pig, cow): 24, 308

Conread position: 1-650
Cow position: chr15:36623169-36622533 (view UCSC Genome Browser custom track)
Alignm length: 663
Alignm identity: 490
Alignm E-value: 0
Alignm gaps (pig, cow): 33, 241

Conread position: 1-651
Cow position: chr15:4815048-4815683 (view UCSC Genome Browser custom track)
Alignm length: 668
Alignm identity: 493
Alignm E-value: 0
Alignm gaps (pig, cow): 24, 271

Conread position: 1-651
Cow position: chr15:17267004-17267655 (view UCSC Genome Browser custom track)
Alignm length: 666
Alignm identity: 497
Alignm E-value: 0
Alignm gaps (pig, cow): 24, 308

Conread position: 1-651
Cow position: chr15:17295499-17296137 (view UCSC Genome Browser custom track)
Alignm length: 663
Alignm identity: 479
Alignm E-value: 0
Alignm gaps (pig, cow): 24, 233

Conread position: 1-651
Cow position: chr15:23173575-23172941 (view UCSC Genome Browser custom track)
Alignm length: 657
Alignm identity: 461
Alignm E-value: 0
Alignm gaps (pig, cow): 23, 290

Conread position: 1-656
Cow position: chr15:7963544-7962898 (view UCSC Genome Browser custom track)
Alignm length: 665
Alignm identity: 472
Alignm E-value: 0
Alignm gaps (pig, cow): 24, 311

Conread position: 1-658
Cow position: chr15:15344612-15343961 (view UCSC Genome Browser custom track)
Alignm length: 672
Alignm identity: 513
Alignm E-value: 0
Alignm gaps (pig, cow): 22, 308

Conread position: 1-660
Cow position: chr15:4140418-4139759 (view UCSC Genome Browser custom track)
Alignm length: 675
Alignm identity: 513
Alignm E-value: 0
Alignm gaps (pig, cow): 24, 308

Conread position: 1-660
Cow position: chr15:7587290-7586638 (view UCSC Genome Browser custom track)
Alignm length: 674
Alignm identity: 503
Alignm E-value: 0
Alignm gaps (pig, cow): 24, 308

Conread position: 1-660
Cow position: chr15:8029517-8028865 (view UCSC Genome Browser custom track)
Alignm length: 678
Alignm identity: 507
Alignm E-value: 0
Alignm gaps (pig, cow): 31, 309

Conread position: 1-660
Cow position: chr15:18579221-18579871 (view UCSC Genome Browser custom track)
Alignm length: 670
Alignm identity: 500
Alignm E-value: 0
Alignm gaps (pig, cow): 24, 304

Conread position: 1-660
Cow position: chr15:26932531-26933191 (view UCSC Genome Browser custom track)
Alignm length: 678
Alignm identity: 475
Alignm E-value: 0
Alignm gaps (pig, cow): 24, 137

Conread position: 1-662
Cow position: chr15:5497552-5498205 (view UCSC Genome Browser custom track)
Alignm length: 676
Alignm identity: 498
Alignm E-value: 0
Alignm gaps (pig, cow): 24, 166

Conread position: 1-662
Cow position: chr15:12418218-12417564 (view UCSC Genome Browser custom track)
Alignm length: 676
Alignm identity: 505
Alignm E-value: 0
Alignm gaps (pig, cow): 23, 276

Conread position: 1-663
Cow position: chr15:2927741-2928410 (view UCSC Genome Browser custom track)
Alignm length: 684
Alignm identity: 508
Alignm E-value: 0
Alignm gaps (pig, cow): 31, 76

Conread position: 1-664
Cow position: chr15:29817-29156 (view UCSC Genome Browser custom track)
Alignm length: 679
Alignm identity: 499
Alignm E-value: 0
Alignm gaps (pig, cow): 24, 308

Conread position: 1-664
Cow position: chr15:60121-60770 (view UCSC Genome Browser custom track)
Alignm length: 679
Alignm identity: 480
Alignm E-value: 0
Alignm gaps (pig, cow): 24, 237

Conread position: 1-664
Cow position: chr15:68069-67413 (view UCSC Genome Browser custom track)
Alignm length: 677
Alignm identity: 496
Alignm E-value: 0
Alignm gaps (pig, cow): 9, 309

Conread position: 1-664
Cow position: chr15:443297-442637 (view UCSC Genome Browser custom track)
Alignm length: 680
Alignm identity: 499
Alignm E-value: 0
Alignm gaps (pig, cow): 19, 153

Conread position: 1-664
Cow position: chr15:481075-481731 (view UCSC Genome Browser custom track)
Alignm length: 674
Alignm identity: 506
Alignm E-value: 0
Alignm gaps (pig, cow): 25, 308

Conread position: 1-664
Cow position: chr15:1785260-1785919 (view UCSC Genome Browser custom track)
Alignm length: 678
Alignm identity: 507
Alignm E-value: 0
Alignm gaps (pig, cow): 22, 106

Conread position: 1-664
Cow position: chr15:2899764-2899105 (view UCSC Genome Browser custom track)
Alignm length: 678
Alignm identity: 500
Alignm E-value: 0
Alignm gaps (pig, cow): 26, 98

Conread position: 1-664
Cow position: chr15:3008342-3007686 (view UCSC Genome Browser custom track)
Alignm length: 677
Alignm identity: 496
Alignm E-value: 0
Alignm gaps (pig, cow): 24, 137

Conread position: 1-664
Cow position: chr15:3258017-3257362 (view UCSC Genome Browser custom track)
Alignm length: 676
Alignm identity: 498
Alignm E-value: 0
Alignm gaps (pig, cow): 24, 308

Conread position: 1-664
Cow position: chr15:3721640-3720987 (view UCSC Genome Browser custom track)
Alignm length: 673
Alignm identity: 495
Alignm E-value: 0
Alignm gaps (pig, cow): 24, 82

Conread position: 1-664
Cow position: chr15:4388240-4388900 (view UCSC Genome Browser custom track)
Alignm length: 679
Alignm identity: 511
Alignm E-value: 0
Alignm gaps (pig, cow): 37, 82

Conread position: 1-664
Cow position: chr15:4641694-4642353 (view UCSC Genome Browser custom track)
Alignm length: 678
Alignm identity: 513
Alignm E-value: 0
Alignm gaps (pig, cow): 24, 310

Conread position: 1-664
Cow position: chr15:4924655-4925302 (view UCSC Genome Browser custom track)
Alignm length: 674
Alignm identity: 492
Alignm E-value: 0
Alignm gaps (pig, cow): 24, 136

Conread position: 1-664
Cow position: chr15:5243538-5242901 (view UCSC Genome Browser custom track)
Alignm length: 672
Alignm identity: 491
Alignm E-value: 0
Alignm gaps (pig, cow): 24, 89

Conread position: 1-664
Cow position: chr15:6119879-6120531 (view UCSC Genome Browser custom track)
Alignm length: 678
Alignm identity: 504
Alignm E-value: 0
Alignm gaps (pig, cow): 24, 213

Conread position: 1-664
Cow position: chr15:6164599-6163951 (view UCSC Genome Browser custom track)
Alignm length: 676
Alignm identity: 505
Alignm E-value: 0
Alignm gaps (pig, cow): 24, 63

Conread position: 1-664
Cow position: chr15:6551125-6550461 (view UCSC Genome Browser custom track)
Alignm length: 681
Alignm identity: 509
Alignm E-value: 0
Alignm gaps (pig, cow): 24, 136

Conread position: 1-664
Cow position: chr15:6589441-6588782 (view UCSC Genome Browser custom track)
Alignm length: 678
Alignm identity: 509
Alignm E-value: 0
Alignm gaps (pig, cow): 31, 308

Conread position: 1-664
Cow position: chr15:7267095-7267754 (view UCSC Genome Browser custom track)
Alignm length: 679
Alignm identity: 503
Alignm E-value: 0
Alignm gaps (pig, cow): 48, 100

Conread position: 1-664
Cow position: chr15:7319059-7319718 (view UCSC Genome Browser custom track)
Alignm length: 677
Alignm identity: 513
Alignm E-value: 0
Alignm gaps (pig, cow): 24, 233

Conread position: 1-664
Cow position: chr15:7565494-7566154 (view UCSC Genome Browser custom track)
Alignm length: 678
Alignm identity: 501
Alignm E-value: 0
Alignm gaps (pig, cow): 24, 308

Conread position: 1-664
Cow position: chr15:10736049-10736719 (view UCSC Genome Browser custom track)
Alignm length: 690
Alignm identity: 478
Alignm E-value: 0
Alignm gaps (pig, cow): 24, 293

Conread position: 1-664
Cow position: chr15:12858633-12859294 (view UCSC Genome Browser custom track)
Alignm length: 678
Alignm identity: 512
Alignm E-value: 0
Alignm gaps (pig, cow): 24, 308

Conread position: 1-664
Cow position: chr15:13682827-13683484 (view UCSC Genome Browser custom track)
Alignm length: 682
Alignm identity: 512
Alignm E-value: 0
Alignm gaps (pig, cow): 24, 309

Conread position: 1-664
Cow position: chr15:16800765-16801427 (view UCSC Genome Browser custom track)
Alignm length: 678
Alignm identity: 503
Alignm E-value: 0
Alignm gaps (pig, cow): 24, 308

Conread position: 1-664
Cow position: chr15:17035137-17034481 (view UCSC Genome Browser custom track)
Alignm length: 677
Alignm identity: 505
Alignm E-value: 0
Alignm gaps (pig, cow): 24, 309

Conread position: 1-664
Cow position: chr15:21636764-21637425 (view UCSC Genome Browser custom track)
Alignm length: 681
Alignm identity: 516
Alignm E-value: 0
Alignm gaps (pig, cow): 24, 132

Conread position: 1-664
Cow position: chr15:21806340-21807002 (view UCSC Genome Browser custom track)
Alignm length: 680
Alignm identity: 515
Alignm E-value: 0
Alignm gaps (pig, cow): 24, 308

Conread position: 1-664
Cow position: chr15:21825356-21826019 (view UCSC Genome Browser custom track)
Alignm length: 679
Alignm identity: 503
Alignm E-value: 0
Alignm gaps (pig, cow): 24, 308

Conread position: 1-664
Cow position: chr15:23667003-23666341 (view UCSC Genome Browser custom track)
Alignm length: 678
Alignm identity: 510
Alignm E-value: 0
Alignm gaps (pig, cow): 24, 308

Conread position: 1-664
Cow position: chr15:25070003-25069341 (view UCSC Genome Browser custom track)
Alignm length: 678
Alignm identity: 512
Alignm E-value: 0
Alignm gaps (pig, cow): 23, 308

Conread position: 1-664
Cow position: chr15:25132447-25133115 (view UCSC Genome Browser custom track)
Alignm length: 685
Alignm identity: 511
Alignm E-value: 0
Alignm gaps (pig, cow): 24, 309

Conread position: 1-664
Cow position: chr15:32714194-32714853 (view UCSC Genome Browser custom track)
Alignm length: 676
Alignm identity: 500
Alignm E-value: 0
Alignm gaps (pig, cow): 24, 308

Conread position: 1-664
Cow position: chr15:35416093-35416740 (view UCSC Genome Browser custom track)
Alignm length: 671
Alignm identity: 458
Alignm E-value: 0
Alignm gaps (pig, cow): 24, 60

Conread position: 1-664
Cow position: chr15:35750804-35750144 (view UCSC Genome Browser custom track)
Alignm length: 678
Alignm identity: 519
Alignm E-value: 0
Alignm gaps (pig, cow): 24, 263

Conread position: 1-664
Cow position: chr15:36329969-36329307 (view UCSC Genome Browser custom track)
Alignm length: 678
Alignm identity: 511
Alignm E-value: 0
Alignm gaps (pig, cow): 24, 308

Conread position: 1-664
Cow position: chr15:38983151-38983827 (view UCSC Genome Browser custom track)
Alignm length: 692
Alignm identity: 505
Alignm E-value: 0
Alignm gaps (pig, cow): 22, 310

Conread position: 1-664
Cow position: chr15:44072939-44073598 (view UCSC Genome Browser custom track)
Alignm length: 675
Alignm identity: 510
Alignm E-value: 0
Alignm gaps (pig, cow): 48, 307

Conread position: 1-664
Cow position: chr15:47202073-47201422 (view UCSC Genome Browser custom track)
Alignm length: 674
Alignm identity: 501
Alignm E-value: 0
Alignm gaps (pig, cow): 24, 136

Conread position: 1-664
Cow position: chr15:50151191-50151852 (view UCSC Genome Browser custom track)
Alignm length: 680
Alignm identity: 502
Alignm E-value: 0
Alignm gaps (pig, cow): 24, 82

Conread position: 1-664
Cow position: chr15:51220232-51220892 (view UCSC Genome Browser custom track)
Alignm length: 681
Alignm identity: 519
Alignm E-value: 0
Alignm gaps (pig, cow): 24, 309

Conread position: 2-536
Cow position: chr15:7058219-7058742 (view UCSC Genome Browser custom track)
Alignm length: 547
Alignm identity: 396
Alignm E-value: 0
Alignm gaps (pig, cow): 23, 149

Conread position: 2-605
Cow position: chr15:11291268-11290689 (view UCSC Genome Browser custom track)
Alignm length: 610
Alignm identity: 431
Alignm E-value: 0
Alignm gaps (pig, cow): 23, 160

Conread position: 2-625
Cow position: chr15:8101950-8102558 (view UCSC Genome Browser custom track)
Alignm length: 633
Alignm identity: 468
Alignm E-value: 0
Alignm gaps (pig, cow): 29, 282

Conread position: 2-629
Cow position: chr15:2021950-2021333 (view UCSC Genome Browser custom track)
Alignm length: 640
Alignm identity: 455
Alignm E-value: 0
Alignm gaps (pig, cow): 23, 156

Conread position: 2-635
Cow position: chr15:6463578-6464187 (view UCSC Genome Browser custom track)
Alignm length: 644
Alignm identity: 481
Alignm E-value: 0
Alignm gaps (pig, cow): 47, 136

Conread position: 2-638
Cow position: chr15:25553635-25554264 (view UCSC Genome Browser custom track)
Alignm length: 649
Alignm identity: 490
Alignm E-value: 0
Alignm gaps (pig, cow): 23, 306

Conread position: 2-651
Cow position: chr15:13546556-13545927 (view UCSC Genome Browser custom track)
Alignm length: 664
Alignm identity: 489
Alignm E-value: 0
Alignm gaps (pig, cow): 23, 205

Conread position: 2-654
Cow position: chr15:35643959-35643318 (view UCSC Genome Browser custom track)
Alignm length: 667
Alignm identity: 507
Alignm E-value: 0
Alignm gaps (pig, cow): 23, 109

Conread position: 2-664
Cow position: chr15:42939408-42940064 (view UCSC Genome Browser custom track)
Alignm length: 678
Alignm identity: 508
Alignm E-value: 0
Alignm gaps (pig, cow): 23, 285

Conread position: 3-426
Cow position: chr15:23797623-23798043 (view UCSC Genome Browser custom track)
Alignm length: 433
Alignm identity: 343
Alignm E-value: 0
Alignm gaps (pig, cow): 22, 12

Conread position: 3-563
Cow position: chr15:31585906-31585348 (view UCSC Genome Browser custom track)
Alignm length: 574
Alignm identity: 437
Alignm E-value: 0
Alignm gaps (pig, cow): 16, 307

Conread position: 3-619
Cow position: chr15:8628804-8629412 (view UCSC Genome Browser custom track)
Alignm length: 628
Alignm identity: 437
Alignm E-value: 0
Alignm gaps (pig, cow): 20, 298

Conread position: 3-637
Cow position: chr15:10477626-10477005 (view UCSC Genome Browser custom track)
Alignm length: 641
Alignm identity: 459
Alignm E-value: 0
Alignm gaps (pig, cow): 22, 216

Conread position: 3-637
Cow position: chr15:11627901-11628525 (view UCSC Genome Browser custom track)
Alignm length: 648
Alignm identity: 459
Alignm E-value: 0
Alignm gaps (pig, cow): 22, 65

Conread position: 3-649
Cow position: chr15:4688525-4689171 (view UCSC Genome Browser custom track)
Alignm length: 661
Alignm identity: 502
Alignm E-value: 0
Alignm gaps (pig, cow): 29, 306

Conread position: 3-652
Cow position: chr15:36619650-36619015 (view UCSC Genome Browser custom track)
Alignm length: 671
Alignm identity: 473
Alignm E-value: 0
Alignm gaps (pig, cow): 22, 143

Conread position: 3-664
Cow position: chr15:21533637-21532984 (view UCSC Genome Browser custom track)
Alignm length: 677
Alignm identity: 509
Alignm E-value: 0
Alignm gaps (pig, cow): 46, 156

Conread position: 3-664
Cow position: chr15:21663249-21662591 (view UCSC Genome Browser custom track)
Alignm length: 677
Alignm identity: 509
Alignm E-value: 0
Alignm gaps (pig, cow): 22, 306

Conread position: 4-649
Cow position: chr15:36940888-36940245 (view UCSC Genome Browser custom track)
Alignm length: 660
Alignm identity: 491
Alignm E-value: 0
Alignm gaps (pig, cow): 21, 305

Conread position: 4-664
Cow position: chr15:2644851-2644195 (view UCSC Genome Browser custom track)
Alignm length: 674
Alignm identity: 498
Alignm E-value: 0
Alignm gaps (pig, cow): 45, 304

Conread position: 4-664
Cow position: chr15:4219420-4218764 (view UCSC Genome Browser custom track)
Alignm length: 675
Alignm identity: 490
Alignm E-value: 0
Alignm gaps (pig, cow): 21, 305

Conread position: 5-611
Cow position: chr15:4673836-4674431 (view UCSC Genome Browser custom track)
Alignm length: 619
Alignm identity: 463
Alignm E-value: 0
Alignm gaps (pig, cow): 26, 85

Conread position: 5-664
Cow position: chr15:3892059-3892737 (view UCSC Genome Browser custom track)
Alignm length: 686
Alignm identity: 487
Alignm E-value: 0
Alignm gaps (pig, cow): 14, 117

Conread position: 6-320
Cow position: chr15:15649916-15649600 (view UCSC Genome Browser custom track)
Alignm length: 319
Alignm identity: 229
Alignm E-value: 0
Alignm gaps (pig, cow): 25, 59

Conread position: 6-623
Cow position: chr15:2410216-2409605 (view UCSC Genome Browser custom track)
Alignm length: 635
Alignm identity: 406
Alignm E-value: 0
Alignm gaps (pig, cow): 19, 82

Conread position: 7-415
Cow position: chr15:17215754-17215366 (view UCSC Genome Browser custom track)
Alignm length: 416
Alignm identity: 285
Alignm E-value: 3e-40
Alignm gaps (pig, cow): 25, 123

Conread position: 7-604
Cow position: chr15:1601083-1601657 (view UCSC Genome Browser custom track)
Alignm length: 614
Alignm identity: 431
Alignm E-value: 0
Alignm gaps (pig, cow): 18, 128

Conread position: 7-631
Cow position: chr15:2670786-2670181 (view UCSC Genome Browser custom track)
Alignm length: 636
Alignm identity: 433
Alignm E-value: 0
Alignm gaps (pig, cow): 18, 70

Conread position: 10-625
Cow position: chr15:4860445-4859844 (view UCSC Genome Browser custom track)
Alignm length: 637
Alignm identity: 458
Alignm E-value: 0
Alignm gaps (pig, cow): 13, 141

Conread position: 10-664
Cow position: chr15:1773946-1774597 (view UCSC Genome Browser custom track)
Alignm length: 669
Alignm identity: 494
Alignm E-value: 0
Alignm gaps (pig, cow): 15, 301

Conread position: 12-532
Cow position: chr15:2898488-2897982 (view UCSC Genome Browser custom track)
Alignm length: 529
Alignm identity: 397
Alignm E-value: 0
Alignm gaps (pig, cow): 13, 217

Conread position: 20-649
Cow position: chr15:43991-44602 (view UCSC Genome Browser custom track)
Alignm length: 642
Alignm identity: 464
Alignm E-value: 0
Alignm gaps (pig, cow): 110, 51

Conread position: 20-664
Cow position: chr15:6805229-6805866 (view UCSC Genome Browser custom track)
Alignm length: 655
Alignm identity: 497
Alignm E-value: 0
Alignm gaps (pig, cow): 29, 104

Conread position: 26-614
Cow position: chr15:4895850-4895287 (view UCSC Genome Browser custom track)
Alignm length: 594
Alignm identity: 421
Alignm E-value: 0
Alignm gaps (pig, cow): 18, 74

Conread position: 26-628
Cow position: chr15:7553131-7553730 (view UCSC Genome Browser custom track)
Alignm length: 622
Alignm identity: 424
Alignm E-value: 0
Alignm gaps (pig, cow): 25, 111

Conread position: 35-426
Cow position: chr15:44666677-44666300 (view UCSC Genome Browser custom track)
Alignm length: 394
Alignm identity: 305
Alignm E-value: 0
Alignm gaps (pig, cow): 354, 21

Conread position: 37-516
Cow position: chr15:4380791-4380322 (view UCSC Genome Browser custom track)
Alignm length: 486
Alignm identity: 374
Alignm E-value: 0
Alignm gaps (pig, cow): 9, 268

Conread position: 37-588
Cow position: chr15:6081231-6081768 (view UCSC Genome Browser custom track)
Alignm length: 559
Alignm identity: 419
Alignm E-value: 0
Alignm gaps (pig, cow): 9, 56

Conread position: 37-631
Cow position: chr15:12455693-12456246 (view UCSC Genome Browser custom track)
Alignm length: 601
Alignm identity: 383
Alignm E-value: 3e-30
Alignm gaps (pig, cow): 44, 78

Conread position: 37-637
Cow position: chr15:12439287-12439850 (view UCSC Genome Browser custom track)
Alignm length: 604
Alignm identity: 435
Alignm E-value: 0
Alignm gaps (pig, cow): 354, 33

Conread position: 37-638
Cow position: chr15:5983174-5983753 (view UCSC Genome Browser custom track)
Alignm length: 610
Alignm identity: 450
Alignm E-value: 0
Alignm gaps (pig, cow): 11, 35

Conread position: 37-649
Cow position: chr15:3791346-3791937 (view UCSC Genome Browser custom track)
Alignm length: 619
Alignm identity: 398
Alignm E-value: 0
Alignm gaps (pig, cow): 74, 166

Conread position: 37-649
Cow position: chr15:9736185-9735588 (view UCSC Genome Browser custom track)
Alignm length: 628
Alignm identity: 408
Alignm E-value: 0
Alignm gaps (pig, cow): 9, 42

Conread position: 37-651
Cow position: chr15:24796401-24796981 (view UCSC Genome Browser custom track)
Alignm length: 618
Alignm identity: 475
Alignm E-value: 0
Alignm gaps (pig, cow): 11, 175

Conread position: 37-664
Cow position: chr15:14573771-14573168 (view UCSC Genome Browser custom track)
Alignm length: 638
Alignm identity: 448
Alignm E-value: 0
Alignm gaps (pig, cow): 22, 185

Conread position: 38-618
Cow position: chr15:17681742-17681185 (view UCSC Genome Browser custom track)
Alignm length: 589
Alignm identity: 396
Alignm E-value: 0
Alignm gaps (pig, cow): 8, 39

Conread position: 40-637
Cow position: chr15:4077598-4077009 (view UCSC Genome Browser custom track)
Alignm length: 610
Alignm identity: 441
Alignm E-value: 0
Alignm gaps (pig, cow): 90, 266

Conread position: 42-509
Cow position: chr15:19724313-19724767 (view UCSC Genome Browser custom track)
Alignm length: 475
Alignm identity: 338
Alignm E-value: 0
Alignm gaps (pig, cow): 350, 86

Conread position: 42-656
Cow position: chr15:4828863-4829479 (view UCSC Genome Browser custom track)
Alignm length: 637
Alignm identity: 441
Alignm E-value: 0
Alignm gaps (pig, cow): 83, 166

Conread position: 43-626
Cow position: chr15:13286563-13285993 (view UCSC Genome Browser custom track)
Alignm length: 592
Alignm identity: 428
Alignm E-value: 0
Alignm gaps (pig, cow): 333, 121

Conread position: 45-658
Cow position: chr15:6281194-6281787 (view UCSC Genome Browser custom track)
Alignm length: 621
Alignm identity: 453
Alignm E-value: 0
Alignm gaps (pig, cow): 55, 40

Conread position: 47-403
Cow position: chr15:9389703-9390046 (view UCSC Genome Browser custom track)
Alignm length: 360
Alignm identity: 234
Alignm E-value: 7e-28
Alignm gaps (pig, cow): 28, 35

Conread position: 49-664
Cow position: chr15:33753735-33753129 (view UCSC Genome Browser custom track)
Alignm length: 624
Alignm identity: 466
Alignm E-value: 0
Alignm gaps (pig, cow): 342, 254

Conread position: 63-649
Cow position: chr15:11575449-11574879 (view UCSC Genome Browser custom track)
Alignm length: 596
Alignm identity: 458
Alignm E-value: 0
Alignm gaps (pig, cow): 97, 65

Conread position: 69-592
Cow position: chr15:6658550-6658034 (view UCSC Genome Browser custom track)
Alignm length: 532
Alignm identity: 403
Alignm E-value: 0
Alignm gaps (pig, cow): 314, 107

Conread position: 70-638
Cow position: chr15:32702163-32701613 (view UCSC Genome Browser custom track)
Alignm length: 571
Alignm identity: 421
Alignm E-value: 0
Alignm gaps (pig, cow): 436, 94

Conread position: 71-636
Cow position: chr15:4952894-4953444 (view UCSC Genome Browser custom track)
Alignm length: 568
Alignm identity: 424
Alignm E-value: 0
Alignm gaps (pig, cow): 319, 232

Conread position: 71-660
Cow position: chr15:20413142-20413723 (view UCSC Genome Browser custom track)
Alignm length: 598
Alignm identity: 462
Alignm E-value: 0
Alignm gaps (pig, cow): 320, 232

Conread position: 71-664
Cow position: chr15:22760422-22759847 (view UCSC Genome Browser custom track)
Alignm length: 606
Alignm identity: 456
Alignm E-value: 0
Alignm gaps (pig, cow): 320, 172

Conread position: 71-664
Cow position: chr15:35404544-35405125 (view UCSC Genome Browser custom track)
Alignm length: 604
Alignm identity: 434
Alignm E-value: 0
Alignm gaps (pig, cow): 320, 64

Conread position: 80-490
Cow position: chr15:32697326-32697717 (view UCSC Genome Browser custom track)
Alignm length: 415
Alignm identity: 294
Alignm E-value: 0
Alignm gaps (pig, cow): 187, 49

Conread position: 81-619
Cow position: chr15:336270-336786 (view UCSC Genome Browser custom track)
Alignm length: 542
Alignm identity: 364
Alignm E-value: 0
Alignm gaps (pig, cow): 426, 39

Conread position: 81-632
Cow position: chr15:33305210-33304679 (view UCSC Genome Browser custom track)
Alignm length: 555
Alignm identity: 415
Alignm E-value: 0
Alignm gaps (pig, cow): 49, 204

Conread position: 81-656
Cow position: chr15:45244171-45244737 (view UCSC Genome Browser custom track)
Alignm length: 579
Alignm identity: 443
Alignm E-value: 0
Alignm gaps (pig, cow): 311, 206

Conread position: 82-564
Cow position: chr15:32646938-32647420 (view UCSC Genome Browser custom track)
Alignm length: 500
Alignm identity: 383
Alignm E-value: 0
Alignm gaps (pig, cow): 307, 221

Conread position: 83-628
Cow position: chr15:37394309-37394830 (view UCSC Genome Browser custom track)
Alignm length: 555
Alignm identity: 423
Alignm E-value: 0
Alignm gaps (pig, cow): 307, 74

Conread position: 84-638
Cow position: chr15:33700088-33700629 (view UCSC Genome Browser custom track)
Alignm length: 567
Alignm identity: 401
Alignm E-value: 0
Alignm gaps (pig, cow): 18, 199

Conread position: 87-649
Cow position: chr15:16788048-16787507 (view UCSC Genome Browser custom track)
Alignm length: 574
Alignm identity: 394
Alignm E-value: 0
Alignm gaps (pig, cow): 144, 200

Conread position: 88-628
Cow position: chr15:46551508-46550985 (view UCSC Genome Browser custom track)
Alignm length: 554
Alignm identity: 366
Alignm E-value: 8.99998e-41
Alignm gaps (pig, cow): 106, 8

Conread position: 93-595
Cow position: chr15:37373535-37373045 (view UCSC Genome Browser custom track)
Alignm length: 509
Alignm identity: 378
Alignm E-value: 0
Alignm gaps (pig, cow): 298, 210

Conread position: 93-664
Cow position: chr15:7985841-7985274 (view UCSC Genome Browser custom track)
Alignm length: 582
Alignm identity: 438
Alignm E-value: 0
Alignm gaps (pig, cow): 187, 212

Conread position: 99-423
Cow position: chr15:28559038-28559367 (view UCSC Genome Browser custom track)
Alignm length: 330
Alignm identity: 244
Alignm E-value: 0
Alignm gaps (pig, cow): 226, 0

Conread position: 99-629
Cow position: chr15:2019884-2020387 (view UCSC Genome Browser custom track)
Alignm length: 536
Alignm identity: 369
Alignm E-value: 0
Alignm gaps (pig, cow): 292, 84

Conread position: 100-664
Cow position: chr15:609522-608967 (view UCSC Genome Browser custom track)
Alignm length: 573
Alignm identity: 417
Alignm E-value: 0
Alignm gaps (pig, cow): 289, 148

Conread position: 101-619
Cow position: chr15:16514786-16515313 (view UCSC Genome Browser custom track)
Alignm length: 529
Alignm identity: 387
Alignm E-value: 0
Alignm gaps (pig, cow): 29, 420

Conread position: 102-630
Cow position: chr15:40344652-40344134 (view UCSC Genome Browser custom track)
Alignm length: 534
Alignm identity: 383
Alignm E-value: 0
Alignm gaps (pig, cow): 289, 168

Conread position: 102-664
Cow position: chr15:27747922-27747365 (view UCSC Genome Browser custom track)
Alignm length: 574
Alignm identity: 437
Alignm E-value: 0
Alignm gaps (pig, cow): 289, 202

Conread position: 103-660
Cow position: chr15:33527964-33527420 (view UCSC Genome Browser custom track)
Alignm length: 566
Alignm identity: 425
Alignm E-value: 0
Alignm gaps (pig, cow): 288, 149

Conread position: 103-664
Cow position: chr15:6563479-6564045 (view UCSC Genome Browser custom track)
Alignm length: 569
Alignm identity: 250
Alignm E-value: 0
Alignm gaps (pig, cow): 288, 341

Conread position: 108-592
Cow position: chr15:5196953-5197429 (view UCSC Genome Browser custom track)
Alignm length: 497
Alignm identity: 375
Alignm E-value: 0
Alignm gaps (pig, cow): 21, 86

Conread position: 108-664
Cow position: chr15:12442138-12442678 (view UCSC Genome Browser custom track)
Alignm length: 565
Alignm identity: 413
Alignm E-value: 0
Alignm gaps (pig, cow): 282, 42

Conread position: 116-631
Cow position: chr15:24097219-24097713 (view UCSC Genome Browser custom track)
Alignm length: 519
Alignm identity: 348
Alignm E-value: 0
Alignm gaps (pig, cow): 275, 109

Conread position: 120-664
Cow position: chr15:2079945-2080483 (view UCSC Genome Browser custom track)
Alignm length: 555
Alignm identity: 416
Alignm E-value: 0
Alignm gaps (pig, cow): 20, 185

Conread position: 120-664
Cow position: chr15:4213785-4214313 (view UCSC Genome Browser custom track)
Alignm length: 549
Alignm identity: 410
Alignm E-value: 0
Alignm gaps (pig, cow): 271, 183

Conread position: 120-664
Cow position: chr15:7577782-7578314 (view UCSC Genome Browser custom track)
Alignm length: 551
Alignm identity: 399
Alignm E-value: 0
Alignm gaps (pig, cow): 369, 183

Conread position: 121-630
Cow position: chr15:34063568-34064070 (view UCSC Genome Browser custom track)
Alignm length: 516
Alignm identity: 397
Alignm E-value: 0
Alignm gaps (pig, cow): 270, 177

Conread position: 121-654
Cow position: chr15:28235615-28236119 (view UCSC Genome Browser custom track)
Alignm length: 543
Alignm identity: 374
Alignm E-value: 0
Alignm gaps (pig, cow): 10, 31

Conread position: 124-563
Cow position: chr15:24047888-24048317 (view UCSC Genome Browser custom track)
Alignm length: 449
Alignm identity: 321
Alignm E-value: 0
Alignm gaps (pig, cow): 267, 180

Conread position: 127-532
Cow position: chr15:49242693-49242296 (view UCSC Genome Browser custom track)
Alignm length: 413
Alignm identity: 309
Alignm E-value: 0
Alignm gaps (pig, cow): 264, 176

Conread position: 137-389
Cow position: chr15:26597796-26597554 (view UCSC Genome Browser custom track)
Alignm length: 254
Alignm identity: 174
Alignm E-value: 6e-26
Alignm gaps (pig, cow): 84, 75

Conread position: 137-502
Cow position: chr15:21840897-21841251 (view UCSC Genome Browser custom track)
Alignm length: 371
Alignm identity: 272
Alignm E-value: 0
Alignm gaps (pig, cow): 24, 73

Conread position: 144-664
Cow position: chr15:50345090-50344581 (view UCSC Genome Browser custom track)
Alignm length: 527
Alignm identity: 405
Alignm E-value: 0
Alignm gaps (pig, cow): 247, 159

Conread position: 151-649
Cow position: chr15:20457974-20458468 (view UCSC Genome Browser custom track)
Alignm length: 515
Alignm identity: 390
Alignm E-value: 0
Alignm gaps (pig, cow): 282, 121

Conread position: 154-664
Cow position: chr15:7848150-7847653 (view UCSC Genome Browser custom track)
Alignm length: 515
Alignm identity: 381
Alignm E-value: 0
Alignm gaps (pig, cow): 235, 149

Conread position: 157-664
Cow position: chr15:5002798-5002296 (view UCSC Genome Browser custom track)
Alignm length: 525
Alignm identity: 374
Alignm E-value: 0
Alignm gaps (pig, cow): 315, 62

Conread position: 160-664
Cow position: chr15:4727828-4728303 (view UCSC Genome Browser custom track)
Alignm length: 513
Alignm identity: 373
Alignm E-value: 0
Alignm gaps (pig, cow): 231, 68

Conread position: 163-591
Cow position: chr15:1298994-1298577 (view UCSC Genome Browser custom track)
Alignm length: 433
Alignm identity: 331
Alignm E-value: 0
Alignm gaps (pig, cow): 228, 140

Conread position: 163-628
Cow position: chr15:20155522-20155068 (view UCSC Genome Browser custom track)
Alignm length: 476
Alignm identity: 299
Alignm E-value: 2e-27
Alignm gaps (pig, cow): 226, 31

Conread position: 163-656
Cow position: chr15:32065633-32065144 (view UCSC Genome Browser custom track)
Alignm length: 506
Alignm identity: 381
Alignm E-value: 0
Alignm gaps (pig, cow): 9, 143

Conread position: 163-664
Cow position: chr15:20173328-20172843 (view UCSC Genome Browser custom track)
Alignm length: 507
Alignm identity: 374
Alignm E-value: 0
Alignm gaps (pig, cow): 176, 118

Conread position: 173-640
Cow position: chr15:13076192-13076646 (view UCSC Genome Browser custom track)
Alignm length: 475
Alignm identity: 364
Alignm E-value: 0
Alignm gaps (pig, cow): 94, 21

Conread position: 176-562
Cow position: chr15:29899010-29899380 (view UCSC Genome Browser custom track)
Alignm length: 387
Alignm identity: 291
Alignm E-value: 0
Alignm gaps (pig, cow): 127, 0

Conread position: 176-656
Cow position: chr15:42419274-42418798 (view UCSC Genome Browser custom track)
Alignm length: 495
Alignm identity: 356
Alignm E-value: 0
Alignm gaps (pig, cow): 209, 127

Conread position: 178-501
Cow position: chr15:26079786-26079471 (view UCSC Genome Browser custom track)
Alignm length: 330
Alignm identity: 251
Alignm E-value: 0
Alignm gaps (pig, cow): 213, 125

Conread position: 179-664
Cow position: chr15:16784000-16784473 (view UCSC Genome Browser custom track)
Alignm length: 491
Alignm identity: 357
Alignm E-value: 0
Alignm gaps (pig, cow): 5, 125

Conread position: 180-634
Cow position: chr15:33717930-33718366 (view UCSC Genome Browser custom track)
Alignm length: 457
Alignm identity: 293
Alignm E-value: 6e-37
Alignm gaps (pig, cow): 211, 94

Conread position: 193-399
Cow position: chr15:9436046-9436243 (view UCSC Genome Browser custom track)
Alignm length: 207
Alignm identity: 148
Alignm E-value: 6e-27
Alignm gaps (pig, cow): 59, 0

Conread position: 194-591
Cow position: chr15:662237-661855 (view UCSC Genome Browser custom track)
Alignm length: 407
Alignm identity: 285
Alignm E-value: 0
Alignm gaps (pig, cow): 34, 110

Conread position: 194-630
Cow position: chr15:26157690-26158133 (view UCSC Genome Browser custom track)
Alignm length: 458
Alignm identity: 319
Alignm E-value: 0
Alignm gaps (pig, cow): 34, 114

Conread position: 194-637
Cow position: chr15:7325697-7325272 (view UCSC Genome Browser custom track)
Alignm length: 448
Alignm identity: 304
Alignm E-value: 0
Alignm gaps (pig, cow): 88, 111

Conread position: 195-651
Cow position: chr15:18214264-18214702 (view UCSC Genome Browser custom track)
Alignm length: 464
Alignm identity: 341
Alignm E-value: 0
Alignm gaps (pig, cow): 196, 32

Conread position: 195-664
Cow position: chr15:9910410-9909949 (view UCSC Genome Browser custom track)
Alignm length: 478
Alignm identity: 360
Alignm E-value: 0
Alignm gaps (pig, cow): 196, 108

Conread position: 201-664
Cow position: chr15:6152946-6152491 (view UCSC Genome Browser custom track)
Alignm length: 472
Alignm identity: 350
Alignm E-value: 0
Alignm gaps (pig, cow): 190, 80

Conread position: 203-664
Cow position: chr15:48556419-48556872 (view UCSC Genome Browser custom track)
Alignm length: 471
Alignm identity: 360
Alignm E-value: 0
Alignm gaps (pig, cow): 186, 94

Conread position: 204-637
Cow position: chr15:44364656-44364233 (view UCSC Genome Browser custom track)
Alignm length: 439
Alignm identity: 317
Alignm E-value: 0
Alignm gaps (pig, cow): 42, 98

Conread position: 212-637
Cow position: chr15:21607483-21607898 (view UCSC Genome Browser custom track)
Alignm length: 432
Alignm identity: 334
Alignm E-value: 0
Alignm gaps (pig, cow): 179, 92

Conread position: 218-592
Cow position: chr15:18057-18413 (view UCSC Genome Browser custom track)
Alignm length: 381
Alignm identity: 267
Alignm E-value: 3.9937e-43
Alignm gaps (pig, cow): 171, 31

Conread position: 219-637
Cow position: chr15:2560134-2560543 (view UCSC Genome Browser custom track)
Alignm length: 425
Alignm identity: 321
Alignm E-value: 0
Alignm gaps (pig, cow): 172, 84

Conread position: 223-574
Cow position: chr15:44378240-44378578 (view UCSC Genome Browser custom track)
Alignm length: 355
Alignm identity: 256
Alignm E-value: 0
Alignm gaps (pig, cow): 168, 80

Conread position: 231-629
Cow position: chr15:21940296-21939907 (view UCSC Genome Browser custom track)
Alignm length: 405
Alignm identity: 307
Alignm E-value: 0
Alignm gaps (pig, cow): 160, 72

Conread position: 231-664
Cow position: chr15:31357871-31357447 (view UCSC Genome Browser custom track)
Alignm length: 442
Alignm identity: 321
Alignm E-value: 0
Alignm gaps (pig, cow): 158, 72

Conread position: 232-637
Cow position: chr15:5004354-5003979 (view UCSC Genome Browser custom track)
Alignm length: 408
Alignm identity: 291
Alignm E-value: 0
Alignm gaps (pig, cow): 157, 71

Conread position: 236-664
Cow position: chr15:26389231-26388816 (view UCSC Genome Browser custom track)
Alignm length: 433
Alignm identity: 325
Alignm E-value: 0
Alignm gaps (pig, cow): 153, 67

Conread position: 239-637
Cow position: chr15:6758742-6758353 (view UCSC Genome Browser custom track)
Alignm length: 405
Alignm identity: 303
Alignm E-value: 0
Alignm gaps (pig, cow): 152, 64

Conread position: 239-651
Cow position: chr15:6488504-6488906 (view UCSC Genome Browser custom track)
Alignm length: 419
Alignm identity: 299
Alignm E-value: 0
Alignm gaps (pig, cow): 150, 64

Conread position: 248-650
Cow position: chr15:37382845-37382450 (view UCSC Genome Browser custom track)
Alignm length: 411
Alignm identity: 308
Alignm E-value: 0
Alignm gaps (pig, cow): 143, 55

Conread position: 250-656
Cow position: chr15:32690186-32689786 (view UCSC Genome Browser custom track)
Alignm length: 412
Alignm identity: 311
Alignm E-value: 0
Alignm gaps (pig, cow): 141, 17

Conread position: 250-664
Cow position: chr15:2924959-2925357 (view UCSC Genome Browser custom track)
Alignm length: 422
Alignm identity: 284
Alignm E-value: 2e-39
Alignm gaps (pig, cow): 218, 44

Conread position: 253-637
Cow position: chr15:42597503-42597128 (view UCSC Genome Browser custom track)
Alignm length: 391
Alignm identity: 288
Alignm E-value: 0
Alignm gaps (pig, cow): 138, 50

Conread position: 257-664
Cow position: chr15:561482-561879 (view UCSC Genome Browser custom track)
Alignm length: 416
Alignm identity: 307
Alignm E-value: 0
Alignm gaps (pig, cow): 134, 46

Conread position: 284-662
Cow position: chr15:10242897-10243271 (view UCSC Genome Browser custom track)
Alignm length: 393
Alignm identity: 287
Alignm E-value: 0
Alignm gaps (pig, cow): 37, 20

Conread position: 306-656
Cow position: chr15:23560824-23561173 (view UCSC Genome Browser custom track)
Alignm length: 356
Alignm identity: 252
Alignm E-value: 0
Alignm gaps (pig, cow): 68, 95

Conread position: 308-660
Cow position: chr15:20348472-20348119 (view UCSC Genome Browser custom track)
Alignm length: 359
Alignm identity: 266
Alignm E-value: 0
Alignm gaps (pig, cow): 178, 83

Conread position: 311-634
Cow position: chr15:1877185-1877508 (view UCSC Genome Browser custom track)
Alignm length: 330
Alignm identity: 213
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 80, 16

Conread position: 312-634
Cow position: chr15:4629451-4629125 (view UCSC Genome Browser custom track)
Alignm length: 329
Alignm identity: 251
Alignm E-value: 0
Alignm gaps (pig, cow): 77, 143

Conread position: 312-664
Cow position: chr15:5197749-5198108 (view UCSC Genome Browser custom track)
Alignm length: 362
Alignm identity: 268
Alignm E-value: 0
Alignm gaps (pig, cow): 26, 138

Conread position: 312-664
Cow position: chr15:18661281-18661639 (view UCSC Genome Browser custom track)
Alignm length: 363
Alignm identity: 276
Alignm E-value: 0
Alignm gaps (pig, cow): 10, 127

Conread position: 318-664
Cow position: chr15:4769305-4769656 (view UCSC Genome Browser custom track)
Alignm length: 356
Alignm identity: 268
Alignm E-value: 0
Alignm gaps (pig, cow): 71, 112

Conread position: 319-582
Cow position: chr15:38937570-38937835 (view UCSC Genome Browser custom track)
Alignm length: 270
Alignm identity: 204
Alignm E-value: 0
Alignm gaps (pig, cow): 72, 121

Conread position: 319-613
Cow position: chr15:10826246-10826534 (view UCSC Genome Browser custom track)
Alignm length: 299
Alignm identity: 226
Alignm E-value: 0
Alignm gaps (pig, cow): 163, 64

Conread position: 319-618
Cow position: chr15:43266909-43267204 (view UCSC Genome Browser custom track)
Alignm length: 307
Alignm identity: 235
Alignm E-value: 0
Alignm gaps (pig, cow): 31, 112

Conread position: 319-623
Cow position: chr15:21645019-21644717 (view UCSC Genome Browser custom track)
Alignm length: 309
Alignm identity: 237
Alignm E-value: 0
Alignm gaps (pig, cow): 72, 120

Conread position: 319-628
Cow position: chr15:2592567-2592871 (view UCSC Genome Browser custom track)
Alignm length: 316
Alignm identity: 238
Alignm E-value: 0
Alignm gaps (pig, cow): 70, 60

Conread position: 319-656
Cow position: chr15:29341303-29340955 (view UCSC Genome Browser custom track)
Alignm length: 360
Alignm identity: 246
Alignm E-value: 3e-31
Alignm gaps (pig, cow): 146, 58

Conread position: 319-660
Cow position: chr15:35837917-35838252 (view UCSC Genome Browser custom track)
Alignm length: 346
Alignm identity: 244
Alignm E-value: 0
Alignm gaps (pig, cow): 62, 66

Conread position: 319-664
Cow position: chr15:677863-678214 (view UCSC Genome Browser custom track)
Alignm length: 354
Alignm identity: 266
Alignm E-value: 0
Alignm gaps (pig, cow): 72, 120

Conread position: 319-664
Cow position: chr15:2590206-2590549 (view UCSC Genome Browser custom track)
Alignm length: 354
Alignm identity: 263
Alignm E-value: 0
Alignm gaps (pig, cow): 70, 60

Conread position: 319-664
Cow position: chr15:4122586-4122936 (view UCSC Genome Browser custom track)
Alignm length: 354
Alignm identity: 260
Alignm E-value: 0
Alignm gaps (pig, cow): 72, 120

Conread position: 319-664
Cow position: chr15:14578601-14578267 (view UCSC Genome Browser custom track)
Alignm length: 352
Alignm identity: 262
Alignm E-value: 0
Alignm gaps (pig, cow): 62, 113

Conread position: 319-664
Cow position: chr15:21153019-21152668 (view UCSC Genome Browser custom track)
Alignm length: 354
Alignm identity: 264
Alignm E-value: 0
Alignm gaps (pig, cow): 72, 120

Conread position: 319-664
Cow position: chr15:22540035-22539686 (view UCSC Genome Browser custom track)
Alignm length: 354
Alignm identity: 271
Alignm E-value: 0
Alignm gaps (pig, cow): 167, 118

Conread position: 319-664
Cow position: chr15:29884509-29884169 (view UCSC Genome Browser custom track)
Alignm length: 354
Alignm identity: 260
Alignm E-value: 0
Alignm gaps (pig, cow): 69, 83

Conread position: 319-664
Cow position: chr15:36356267-36355919 (view UCSC Genome Browser custom track)
Alignm length: 352
Alignm identity: 244
Alignm E-value: 0
Alignm gaps (pig, cow): 72, 121

Conread position: 324-637
Cow position: chr15:2533538-2533855 (view UCSC Genome Browser custom track)
Alignm length: 320
Alignm identity: 243
Alignm E-value: 0
Alignm gaps (pig, cow): 67, 115

Conread position: 326-638
Cow position: chr15:14756990-14757307 (view UCSC Genome Browser custom track)
Alignm length: 326
Alignm identity: 229
Alignm E-value: 6e-38
Alignm gaps (pig, cow): 65, 114

Conread position: 326-641
Cow position: chr15:44260842-44260537 (view UCSC Genome Browser custom track)
Alignm length: 321
Alignm identity: 221
Alignm E-value: 1e-34
Alignm gaps (pig, cow): 166, 70

Conread position: 326-651
Cow position: chr15:2806445-2806132 (view UCSC Genome Browser custom track)
Alignm length: 330
Alignm identity: 239
Alignm E-value: 0
Alignm gaps (pig, cow): 63, 112

Conread position: 326-651
Cow position: chr15:22162447-22162136 (view UCSC Genome Browser custom track)
Alignm length: 329
Alignm identity: 219
Alignm E-value: 2e-28
Alignm gaps (pig, cow): 166, 59

Conread position: 326-654
Cow position: chr15:29273433-29273105 (view UCSC Genome Browser custom track)
Alignm length: 332
Alignm identity: 249
Alignm E-value: 0
Alignm gaps (pig, cow): 65, 114

Conread position: 327-486
Cow position: chr15:52748914-52749070 (view UCSC Genome Browser custom track)
Alignm length: 161
Alignm identity: 119
Alignm E-value: 4e-23
Alignm gaps (pig, cow): 124, 87

Conread position: 328-648
Cow position: chr15:16740867-16741194 (view UCSC Genome Browser custom track)
Alignm length: 332
Alignm identity: 238
Alignm E-value: 0
Alignm gaps (pig, cow): 15, 112

Conread position: 328-649
Cow position: chr15:2015285-2015608 (view UCSC Genome Browser custom track)
Alignm length: 331
Alignm identity: 246
Alignm E-value: 0
Alignm gaps (pig, cow): 63, 74

Conread position: 328-652
Cow position: chr15:1328963-1329291 (view UCSC Genome Browser custom track)
Alignm length: 341
Alignm identity: 241
Alignm E-value: 2e-38
Alignm gaps (pig, cow): 34, 107

Conread position: 329-628
Cow position: chr15:8060996-8061297 (view UCSC Genome Browser custom track)
Alignm length: 306
Alignm identity: 194
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 60, 74

Conread position: 329-660
Cow position: chr15:45292131-45292467 (view UCSC Genome Browser custom track)
Alignm length: 340
Alignm identity: 252
Alignm E-value: 0
Alignm gaps (pig, cow): 61, 49

Conread position: 330-637
Cow position: chr15:34141164-34140859 (view UCSC Genome Browser custom track)
Alignm length: 315
Alignm identity: 227
Alignm E-value: 9.80909e-45
Alignm gaps (pig, cow): 17, 10

Conread position: 333-637
Cow position: chr15:38684315-38684020 (view UCSC Genome Browser custom track)
Alignm length: 306
Alignm identity: 234
Alignm E-value: 0
Alignm gaps (pig, cow): 56, 105

Conread position: 340-637
Cow position: chr15:14321011-14321286 (view UCSC Genome Browser custom track)
Alignm length: 301
Alignm identity: 211
Alignm E-value: 2e-28
Alignm gaps (pig, cow): 41, 62

Conread position: 340-664
Cow position: chr15:25165281-25164951 (view UCSC Genome Browser custom track)
Alignm length: 333
Alignm identity: 248
Alignm E-value: 0
Alignm gaps (pig, cow): 49, 98

Conread position: 340-664
Cow position: chr15:25463701-25463375 (view UCSC Genome Browser custom track)
Alignm length: 333
Alignm identity: 249
Alignm E-value: 0
Alignm gaps (pig, cow): 51, 99

Conread position: 342-651
Cow position: chr15:4712732-4713047 (view UCSC Genome Browser custom track)
Alignm length: 318
Alignm identity: 236
Alignm E-value: 0
Alignm gaps (pig, cow): 49, 98

Conread position: 343-664
Cow position: chr15:17193737-17193406 (view UCSC Genome Browser custom track)
Alignm length: 334
Alignm identity: 241
Alignm E-value: 0
Alignm gaps (pig, cow): 48, 106

Conread position: 346-664
Cow position: chr15:45944867-45944542 (view UCSC Genome Browser custom track)
Alignm length: 328
Alignm identity: 242
Alignm E-value: 0
Alignm gaps (pig, cow): 43, 93

Conread position: 354-587
Cow position: chr15:25436237-25436001 (view UCSC Genome Browser custom track)
Alignm length: 239
Alignm identity: 181
Alignm E-value: 9.94922e-44
Alignm gaps (pig, cow): 37, 95

Conread position: 354-664
Cow position: chr15:4822232-4821918 (view UCSC Genome Browser custom track)
Alignm length: 319
Alignm identity: 238
Alignm E-value: 0
Alignm gaps (pig, cow): 37, 48

Conread position: 356-651
Cow position: chr15:35739079-35739371 (view UCSC Genome Browser custom track)
Alignm length: 300
Alignm identity: 229
Alignm E-value: 0
Alignm gaps (pig, cow): 33, 82

Conread position: 361-529
Cow position: chr15:3653232-3653061 (view UCSC Genome Browser custom track)
Alignm length: 176
Alignm identity: 131
Alignm E-value: 4e-23
Alignm gaps (pig, cow): 30, 59

Conread position: 361-664
Cow position: chr15:7841163-7841472 (view UCSC Genome Browser custom track)
Alignm length: 314
Alignm identity: 237
Alignm E-value: 0
Alignm gaps (pig, cow): 29, 88

Conread position: 363-660
Cow position: chr15:35591-35888 (view UCSC Genome Browser custom track)
Alignm length: 306
Alignm identity: 226
Alignm E-value: 0
Alignm gaps (pig, cow): 26, 42

Conread position: 363-664
Cow position: chr15:6367640-6367339 (view UCSC Genome Browser custom track)
Alignm length: 309
Alignm identity: 236
Alignm E-value: 0
Alignm gaps (pig, cow): 28, 12

Conread position: 364-664
Cow position: chr15:42727230-42727527 (view UCSC Genome Browser custom track)
Alignm length: 308
Alignm identity: 234
Alignm E-value: 0
Alignm gaps (pig, cow): 27, 60

Conread position: 372-649
Cow position: chr15:21915961-21916234 (view UCSC Genome Browser custom track)
Alignm length: 285
Alignm identity: 189
Alignm E-value: 1e-20
Alignm gaps (pig, cow): 19, 44

Conread position: 374-641
Cow position: chr15:7574658-7574936 (view UCSC Genome Browser custom track)
Alignm length: 283
Alignm identity: 201
Alignm E-value: 5e-35
Alignm gaps (pig, cow): 17, 76

Conread position: 386-664
Cow position: chr15:22533283-22533001 (view UCSC Genome Browser custom track)
Alignm length: 286
Alignm identity: 197
Alignm E-value: 1e-34
Alignm gaps (pig, cow): 106, 52

Conread position: 388-664
Cow position: chr15:22096194-22095919 (view UCSC Genome Browser custom track)
Alignm length: 281
Alignm identity: 211
Alignm E-value: 0
Alignm gaps (pig, cow): 98, 50

Conread position: 411-660
Cow position: chr15:29811848-29811599 (view UCSC Genome Browser custom track)
Alignm length: 254
Alignm identity: 182
Alignm E-value: 6e-37
Alignm gaps (pig, cow): 78, 35

Conread position: 416-656
Cow position: chr15:8937311-8937554 (view UCSC Genome Browser custom track)
Alignm length: 247
Alignm identity: 180
Alignm E-value: 2e-37
Alignm gaps (pig, cow): 69, 22

Conread position: 431-631
Cow position: chr15:10838884-10839084 (view UCSC Genome Browser custom track)
Alignm length: 203
Alignm identity: 149
Alignm E-value: 3e-32
Alignm gaps (pig, cow): 29, 82

Conread position: 442-664
Cow position: chr15:6537930-6537712 (view UCSC Genome Browser custom track)
Alignm length: 223
Alignm identity: 171
Alignm E-value: 9.80909e-45
Alignm gaps (pig, cow): 36, 0

Conread position: 447-636
Cow position: chr15:22752485-22752308 (view UCSC Genome Browser custom track)
Alignm length: 191
Alignm identity: 141
Alignm E-value: 4e-24
Alignm gaps (pig, cow): 102, 26

Conread position: 447-664
Cow position: chr15:16967623-16967835 (view UCSC Genome Browser custom track)
Alignm length: 220
Alignm identity: 167
Alignm E-value: 7e-39
Alignm gaps (pig, cow): 192, 39

Conread position: 452-664
Cow position: chr15:41793394-41793177 (view UCSC Genome Browser custom track)
Alignm length: 219
Alignm identity: 169
Alignm E-value: 1.00053e-42
Alignm gaps (pig, cow): 37, 63

Conread position: 452-664
Cow position: chr15:44576334-44576551 (view UCSC Genome Browser custom track)
Alignm length: 219
Alignm identity: 168
Alignm E-value: 9.99967e-42
Alignm gaps (pig, cow): 34, 59

Conread position: 455-634
Cow position: chr15:53357267-53357091 (view UCSC Genome Browser custom track)
Alignm length: 180
Alignm identity: 146
Alignm E-value: 9.99967e-42
Alignm gaps (pig, cow): 39, 0

Conread position: 456-638
Cow position: chr15:22451639-22451826 (view UCSC Genome Browser custom track)
Alignm length: 189
Alignm identity: 131
Alignm E-value: 1e-20
Alignm gaps (pig, cow): 33, 54

Conread position: 457-637
Cow position: chr15:37980843-37980660 (view UCSC Genome Browser custom track)
Alignm length: 185
Alignm identity: 146
Alignm E-value: 2e-38
Alignm gaps (pig, cow): 32, 58

Conread position: 464-662
Cow position: chr15:44164564-44164762 (view UCSC Genome Browser custom track)
Alignm length: 202
Alignm identity: 138
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 179, 14

Conread position: 492-631
Cow position: chr15:4730613-4730747 (view UCSC Genome Browser custom track)
Alignm length: 140
Alignm identity: 108
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 19, 0

Conread position: 515-637
Cow position: chr15:39407272-39407150 (view UCSC Genome Browser custom track)
Alignm length: 123
Alignm identity: 104
Alignm E-value: 3e-31
Alignm gaps (pig, cow): 0, 0

Show alignments to all cow chromosomes.